ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2m23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genom... 178 1e-41
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 178 1e-41
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
5dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic D... 100 8e-18
6gb|AC141876.4| Mus musculus BAC clone RP24-289M9 from chromosome... 44 0.42
7gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana... 42 1.6
8emb|AL845354.13| Mouse DNA sequence from clone RP23-318L10 on ch... 42 1.6
9emb|AL513346.17| Mouse DNA sequence from clone RP23-170L10 on ch... 42 1.6
10gb|CP000038.1| Shigella sonnei Ss046, complete genome 42 1.6
11gb|AC153879.1| Mus musculus BAC RP23-264C21 (Roswell Park Cance... 40 6.5
12gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosom... 40 6.5
13gb|AC102475.7| Mus musculus chromosome 8, clone RP24-393D2, comp... 40 6.5
14ref|XM_458169.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 6.5
15gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chrom... 40 6.5
16gb|AC118212.7| Mus musculus chromosome 6, clone RP24-170E4, comp... 40 6.5
17gb|AC125308.3| Mus musculus BAC clone RP24-481N17 from chromosom... 40 6.5
18gb|AC121796.3| Mus musculus BAC clone RP23-423D22 from chromosom... 40 6.5
19gb|AC125218.3| Mus musculus BAC clone RP23-67F22 from 18, comple... 40 6.5
20ref|XM_853208.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
21ref|XM_853171.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
22ref|XM_853126.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
23ref|XM_853088.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
24ref|XM_853048.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
25ref|XM_853009.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
26ref|XM_852965.1| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
27ref|XM_533514.2| PREDICTED: Canis familiaris similar to ubiquili... 40 6.5
28gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete s... 40 6.5
29emb|BX537333.1| Human DNA sequence from clone WI2-88277B6 on chr... 40 6.5
30gb|AC182842.3| Pan troglodytes BAC clone CH251-38C10 from chromo... 40 6.5
31emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 40 6.5
32emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 i... 40 6.5
33gb|AC079459.30| Homo sapiens 12 BAC RP11-435O22 (Roswell Park Ca... 40 6.5
34gb|AC080096.21| Homo sapiens 3 BAC RP11-443O18 (Roswell Park Can... 40 6.5
35gb|AC104669.6| Homo sapiens 3 BAC RP11-115I8 (Roswell Park Cance... 40 6.5
36gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chrom... 40 6.5
37gb|AC093657.4| Homo sapiens BAC clone RP11-447B21 from 4, comple... 40 6.5
38gb|AC171007.3| Gallus gallus BAC clone CH261-166I11 from chromos... 40 6.5
39gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complet... 40 6.5
40gb|AC159468.4| Mus musculus 10 BAC RP23-335A3 (Roswell Park Canc... 40 6.5
41gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome... 40 6.5
42gb|AC007327.1|AC007327 Homo sapiens clone RP11-155G7 from 7p14-1... 40 6.5
43gb|AC153522.4| Mus musculus 10 BAC RP23-8O1 (Roswell Park Cancer... 40 6.5
44emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on ch... 40 6.5
45emb|AL772340.19| Zebrafish DNA sequence from clone CH211-150G2, ... 40 6.5
46gb|AC149598.2| Mus musculus BAC clone RP24-119N9 from 18, comple... 40 6.5
47gb|AC132947.4| Mus musculus BAC clone RP24-372N17 from 8, comple... 40 6.5
48gb|AC147614.4| Mus musculus BAC clone RP23-399A18 from 7, comple... 40 6.5
49gb|AC163633.4| Mus musculus BAC clone RP24-177N8 from chromosome... 40 6.5
50emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chr... 40 6.5 
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete
             sequence
          Length = 145714

 Score =  178 bits (90), Expect = 1e-41
 Identities = 156/178 (87%)
 Strand = Plus / Plus

                                                                         
Query: 120   aggttgtaggaggagaagacatctttgccacaattagatggtcacaaaagttgttgtatg 179
             |||||| ||||||||||||||| |||||||| ||||||||||||||||||||  | ||||
Sbjct: 67335 aggttggaggaggagaagacatatttgccacgattagatggtcacaaaagttactatatg 67394

                                                                         
Query: 180   ataatggacagttttctgttgatattccgtttcggtttccacattatgtgaaccctttac 239
             | |||||||||||||||||||||||||| ||||  ||||| || |||||||||||||| |
Sbjct: 67395 acaatggacagttttctgttgatattccttttcaatttccgcaatatgtgaaccctttgc 67454

                                                                       
Query: 240   ctaaaattttcacaaaaaaggagaaaattcagttaactgtgaatagtggtgtgagtaa 297
             | ||| | || |  |||||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 67455 caaaagtgtttatgaaaaaggaaaaaattcagttgactctgaatagtggtgtgagtaa 67512



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                         
Query: 14    tacaatactcatgtaattgatgtagatggtaacagtcctgtgaagattgtaaaaactgag 73
             ||||| || ||||||||||||||||| | | |  || | ||||||||||  |||||||||
Sbjct: 67117 tacaaaacccatgtaattgatgtagaggatcaaggtgcagtgaagattgctaaaactgag 67176

                                                               
Query: 74    agtggtggtattctgaagcgccagttttttcaattgacaataccacaggt 123
             ||||| ||| || | |||||||| || |||   |||||||||||||||||
Sbjct: 67177 agtgggggtcttttaaagcgccaattcttttccttgacaataccacaggt 67226
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  178 bits (90), Expect = 1e-41
 Identities = 156/178 (87%)
 Strand = Plus / Minus

                                                                            
Query: 120      aggttgtaggaggagaagacatctttgccacaattagatggtcacaaaagttgttgtatg 179
                |||||| ||||||||||||||| |||||||| ||||||||||||||||||||  | ||||
Sbjct: 16516998 aggttggaggaggagaagacatatttgccacgattagatggtcacaaaagttactatatg 16516939

                                                                            
Query: 180      ataatggacagttttctgttgatattccgtttcggtttccacattatgtgaaccctttac 239
                | |||||||||||||||||||||||||| ||||  ||||| || |||||||||||||| |
Sbjct: 16516938 acaatggacagttttctgttgatattccttttcaatttccgcaatatgtgaaccctttgc 16516879

                                                                          
Query: 240      ctaaaattttcacaaaaaaggagaaaattcagttaactgtgaatagtggtgtgagtaa 297
                | ||| | || |  |||||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 16516878 caaaagtgtttatgaaaaaggaaaaaattcagttgactctgaatagtggtgtgagtaa 16516821



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                            
Query: 14       tacaatactcatgtaattgatgtagatggtaacagtcctgtgaagattgtaaaaactgag 73
                ||||| || ||||||||||||||||| | | |  || | ||||||||||  |||||||||
Sbjct: 16517216 tacaaaacccatgtaattgatgtagaggatcaaggtgcagtgaagattgctaaaactgag 16517157

                                                                  
Query: 74       agtggtggtattctgaagcgccagttttttcaattgacaataccacaggt 123
                ||||| ||| || | |||||||| || |||   |||||||||||||||||
Sbjct: 16517156 agtgggggtcttttaaagcgccaattcttttccttgacaataccacaggt 16517107
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  178 bits (90), Expect = 1e-41
 Identities = 156/178 (87%)
 Strand = Plus / Minus

                                                                            
Query: 120      aggttgtaggaggagaagacatctttgccacaattagatggtcacaaaagttgttgtatg 179
                |||||| ||||||||||||||| |||||||| ||||||||||||||||||||  | ||||
Sbjct: 16510631 aggttggaggaggagaagacatatttgccacgattagatggtcacaaaagttactatatg 16510572

                                                                            
Query: 180      ataatggacagttttctgttgatattccgtttcggtttccacattatgtgaaccctttac 239
                | |||||||||||||||||||||||||| ||||  ||||| || |||||||||||||| |
Sbjct: 16510571 acaatggacagttttctgttgatattccttttcaatttccgcaatatgtgaaccctttgc 16510512

                                                                          
Query: 240      ctaaaattttcacaaaaaaggagaaaattcagttaactgtgaatagtggtgtgagtaa 297
                | ||| | || |  |||||||| ||||||||||| ||| |||||||||||||||||||
Sbjct: 16510511 caaaagtgtttatgaaaaaggaaaaaattcagttgactctgaatagtggtgtgagtaa 16510454



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 90/110 (81%)
 Strand = Plus / Minus

                                                                            
Query: 14       tacaatactcatgtaattgatgtagatggtaacagtcctgtgaagattgtaaaaactgag 73
                ||||| || ||||||||||||||||| | | |  || | ||||||||||  |||||||||
Sbjct: 16510849 tacaaaacccatgtaattgatgtagaggatcaaggtgcagtgaagattgctaaaactgag 16510790

                                                                  
Query: 74       agtggtggtattctgaagcgccagttttttcaattgacaataccacaggt 123
                ||||| ||| || | |||||||| || |||   |||||||||||||||||
Sbjct: 16510789 agtgggggtcttttaaagcgccaattcttttccttgacaataccacaggt 16510740
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                            
Query: 206      ccgtttcggtttccacattatgtgaaccctttacctaaaattttcacaaaaaaggagaaa 265
                ||||| || |||||| ||||||| ||||| || || ||| | ||||  |||| |||||||
Sbjct: 25246749 ccgttccgttttccatattatgttaacccattgccaaaagtattcatgaaaagggagaaa 25246808

                                                                            
Query: 266      attcagttaactgtgaatagtggtgtgagtaaagaggttttattgcaggggaccagccat 325
                |||||||| ||||||||||||||| | ||||||||||||||| ||||||| || ||||| 
Sbjct: 25246809 attcagttgactgtgaatagtggtttcagtaaagaggttttactgcagggaacaagccac 25246868

                          
Query: 326      cccttgaagg 335
                || |||||||
Sbjct: 25246869 ccattgaagg 25246878



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 383      gttgagaattggtcaatcaaagatttcaacttttcatatagtgt 426
                |||||||||||||||| |||||||||||| |||||||| |||||
Sbjct: 25247027 gttgagaattggtcaagcaaagatttcaatttttcatacagtgt 25247070
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>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0616D06
          Length = 153800

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                         
Query: 206   ccgtttcggtttccacattatgtgaaccctttacctaaaattttcacaaaaaaggagaaa 265
             ||||| || |||||| ||||||| ||||| || || ||| | ||||  |||| |||||||
Sbjct: 63420 ccgttccgttttccatattatgttaacccattgccaaaagtattcatgaaaagggagaaa 63479

                                                                         
Query: 266   attcagttaactgtgaatagtggtgtgagtaaagaggttttattgcaggggaccagccat 325
             |||||||| ||||||||||||||| | ||||||||||||||| ||||||| || ||||| 
Sbjct: 63480 attcagttgactgtgaatagtggtttcagtaaagaggttttactgcagggaacaagccac 63539

                       
Query: 326   cccttgaagg 335
             || |||||||
Sbjct: 63540 ccattgaagg 63549



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 383   gttgagaattggtcaatcaaagatttcaacttttcatatagtgt 426
             |||||||||||||||| |||||||||||| |||||||| |||||
Sbjct: 63698 gttgagaattggtcaagcaaagatttcaatttttcatacagtgt 63741
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>gb|AC141876.4| Mus musculus BAC clone RP24-289M9 from chromosome 6, complete sequence
          Length = 151702

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 408   tcaacttttcatatagtgttta 429
             ||||||||||||||||||||||
Sbjct: 75531 tcaacttttcatatagtgttta 75552
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>gb|AC002328.2|AC002328 Genomic sequence for Arabidopsis thaliana BAC F20N2 from chromosome I,
             complete sequence
          Length = 109171

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   tttttcttgcatgaagctgtg 382
             |||||||||||||||||||||
Sbjct: 66641 tttttcttgcatgaagctgtg 66621
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>emb|AL845354.13| Mouse DNA sequence from clone RP23-318L10 on chromosome 2, complete
             sequence
          Length = 178468

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 184   tggacagttttctgttgatat 204
             |||||||||||||||||||||
Sbjct: 92127 tggacagttttctgttgatat 92147
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>emb|AL513346.17| Mouse DNA sequence from clone RP23-170L10 on chromosome 15, complete
             sequence
          Length = 196912

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    tcctgtgaagattgtaaaaac 69
             |||||||||||||||||||||
Sbjct: 49458 tcctgtgaagattgtaaaaac 49478
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 267     ttcagttaactgtgaatagtg 287
               |||||||||||||||||||||
Sbjct: 1391988 ttcagttaactgtgaatagtg 1392008
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>gb|AC153879.1| Mus musculus  BAC RP23-264C21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 182252

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   agaaattatttttcttgcatgaag 377
             |||||| |||||||||||||||||
Sbjct: 90476 agaaatgatttttcttgcatgaag 90499
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>gb|AC153727.6| Mus musculus BAC clone RP23-354L15 from chromosome 12, complete
             sequence
          Length = 202733

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 235   tttacctaaaattttcacaaaaaaggag 262
             |||| ||||||||| |||||||||||||
Sbjct: 90705 tttatctaaaatttccacaaaaaaggag 90732
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>gb|AC102475.7| Mus musculus chromosome 8, clone RP24-393D2, complete sequence
          Length = 136660

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   agaaattatttttcttgcatgaag 377
             ||||| ||||||||||||||||||
Sbjct: 79320 agaaaatatttttcttgcatgaag 79343
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>ref|XM_458169.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C12265g)
            partial mRNA
          Length = 1674

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  gatttcaacttttcatatag 423
            ||||||||||||||||||||
Sbjct: 1285 gatttcaacttttcatatag 1304
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>gb|AC182234.3| Pan troglodytes BAC clone CH251-487I22 from chromosome x, complete
             sequence
          Length = 188826

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   aaagatttcaacttttcata 420
             ||||||||||||||||||||
Sbjct: 85587 aaagatttcaacttttcata 85606
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>gb|AC118212.7| Mus musculus chromosome 6, clone RP24-170E4, complete sequence
          Length = 190612

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    ctgagaaattatttttcttg 370
              ||||||||||||||||||||
Sbjct: 121214 ctgagaaattatttttcttg 121233
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>gb|AC125308.3| Mus musculus BAC clone RP24-481N17 from chromosome 5, complete sequence
          Length = 128910

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ccacattatgtgaacccttt 237
              ||||||||||||||||||||
Sbjct: 123637 ccacattatgtgaacccttt 123656
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>gb|AC121796.3| Mus musculus BAC clone RP23-423D22 from chromosome 18, complete
             sequence
          Length = 158469

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   ccacattatgtgaacccttt 237
             ||||||||||||||||||||
Sbjct: 64239 ccacattatgtgaacccttt 64258
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>gb|AC125218.3| Mus musculus BAC clone RP23-67F22 from 18, complete sequence
          Length = 149450

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   ccacattatgtgaacccttt 237
             ||||||||||||||||||||
Sbjct: 21700 ccacattatgtgaacccttt 21719
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>ref|XM_853208.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 8 (LOC476312), mRNA
          Length = 2174

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 865 cttgtgcagcgctcaacatt 846
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>ref|XM_853171.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 7 (LOC476312), mRNA
          Length = 2129

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 865 cttgtgcagcgctcaacatt 846
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>ref|XM_853126.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 6 (LOC476312), mRNA
          Length = 2081

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 865 cttgtgcagcgctcaacatt 846
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>ref|XM_853088.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 5 (LOC476312), mRNA
          Length = 2126

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 865 cttgtgcagcgctcaacatt 846
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>ref|XM_853048.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 4 (LOC476312), mRNA
          Length = 1550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 250 cttgtgcagcgctcaacatt 231
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>ref|XM_853009.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 3 (LOC476312), mRNA
          Length = 1991

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 727 cttgtgcagcgctcaacatt 708
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>ref|XM_852965.1| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 2 (LOC476312), mRNA
          Length = 1751

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 838 cttgtgcagcgctcaacatt 819
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>ref|XM_533514.2| PREDICTED: Canis familiaris similar to ubiquilin 1 isoform 1,
           transcript variant 1 (LOC476312), mRNA
          Length = 2165

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 455 cttgtgcagcgctcaacatt 474
           ||||||||||||||||||||
Sbjct: 865 cttgtgcagcgctcaacatt 846
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>gb|AC140914.20| Medicago truncatula clone mth2-18h17, complete sequence
          Length = 129792

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    taaaattttcacaaaaaagg 260
              ||||||||||||||||||||
Sbjct: 112741 taaaattttcacaaaaaagg 112722
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>emb|BX537333.1| Human DNA sequence from clone WI2-88277B6 on chromosome X Contains gene
             LOC257122, complete sequence
          Length = 37959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   aaagatttcaacttttcata 420
             ||||||||||||||||||||
Sbjct: 10978 aaagatttcaacttttcata 10997
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>gb|AC182842.3| Pan troglodytes BAC clone CH251-38C10 from chromosome x, complete
             sequence
          Length = 206627

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   aaagatttcaacttttcata 420
             ||||||||||||||||||||
Sbjct: 10921 aaagatttcaacttttcata 10940
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>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
               hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     gatttcaacttttcatatag 423
               ||||||||||||||||||||
Sbjct: 1004936 gatttcaacttttcatatag 1004917
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>emb|BX572646.11| Zebrafish DNA sequence from clone DKEY-245O11 in linkage group 18,
             complete sequence
          Length = 116953

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   cacaaaaaaggagaaaattc 269
             ||||||||||||||||||||
Sbjct: 67128 cacaaaaaaggagaaaattc 67109
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>gb|AC079459.30| Homo sapiens 12 BAC RP11-435O22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 139076

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   gctgagaaattatttttctt 369
             ||||||||||||||||||||
Sbjct: 47616 gctgagaaattatttttctt 47597
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>gb|AC080096.21| Homo sapiens 3 BAC RP11-443O18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 89653

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   aatcaggcaggctgagaaat 359
             ||||||||||||||||||||
Sbjct: 75072 aatcaggcaggctgagaaat 75053
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>gb|AC104669.6| Homo sapiens 3 BAC RP11-115I8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 135933

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    tcctgtgaagattgtaaaaa 68
             ||||||||||||||||||||
Sbjct: 37901 tcctgtgaagattgtaaaaa 37882
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>gb|AC182468.2| Pan troglodytes BAC clone CH251-483N21 from chromosome x, complete
             sequence
          Length = 193874

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   aaagatttcaacttttcata 420
             ||||||||||||||||||||
Sbjct: 72398 aaagatttcaacttttcata 72417
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>gb|AC093657.4| Homo sapiens BAC clone RP11-447B21 from 4, complete sequence
          Length = 162689

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   agaaattatttttcttgcat 373
             ||||||||||||||||||||
Sbjct: 88057 agaaattatttttcttgcat 88038
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>gb|AC171007.3| Gallus gallus BAC clone CH261-166I11 from chromosome ul, complete
              sequence
          Length = 223327

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 61     tgtaaaaactgagagtggtggtat 84
              ||||||||||||||||||| ||||
Sbjct: 160141 tgtaaaaactgagagtggttgtat 160164
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>gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complete sequence
          Length = 162701

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   catctttgccacaattagat 158
             ||||||||||||||||||||
Sbjct: 91598 catctttgccacaattagat 91617
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>gb|AC159468.4| Mus musculus 10 BAC RP23-335A3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214532

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 354   agaaattatttttcttgcatgaag 377
             |||||| |||||||||||||||||
Sbjct: 17981 agaaatgatttttcttgcatgaag 17958
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>gb|AC145345.3| Mus musculus BAC clone RP23-343D3 from chromosome 7, complete sequence
          Length = 212264

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    ccacattatgtgaacccttt 237
              ||||||||||||||||||||
Sbjct: 128988 ccacattatgtgaacccttt 128969
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>gb|AC007327.1|AC007327 Homo sapiens clone RP11-155G7 from 7p14-15, complete sequence
          Length = 169347

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   agaaattatttttcttgcat 373
             ||||||||||||||||||||
Sbjct: 36120 agaaattatttttcttgcat 36139
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>gb|AC153522.4| Mus musculus 10 BAC RP23-8O1 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 238562

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    agaaattatttttcttgcatgaag 377
              |||||| |||||||||||||||||
Sbjct: 233393 agaaatgatttttcttgcatgaag 233370
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>emb|AL807802.22| Mouse DNA sequence from clone RP23-351B24 on chromosome 4, complete
             sequence
          Length = 186857

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   ccacattatgtgaacccttt 237
             ||||||||||||||||||||
Sbjct: 94985 ccacattatgtgaacccttt 95004
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>emb|AL772340.19| Zebrafish DNA sequence from clone CH211-150G2, complete sequence
          Length = 174176

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   agaaattatttttcttgcat 373
             ||||||||||||||||||||
Sbjct: 22159 agaaattatttttcttgcat 22140
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>gb|AC149598.2| Mus musculus BAC clone RP24-119N9 from 18, complete sequence
          Length = 161955

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ccacattatgtgaacccttt 237
              ||||||||||||||||||||
Sbjct: 131918 ccacattatgtgaacccttt 131937
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>gb|AC132947.4| Mus musculus BAC clone RP24-372N17 from 8, complete sequence
          Length = 175482

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 354    agaaattatttttcttgcatgaag 377
              ||||| ||||||||||||||||||
Sbjct: 149915 agaaaatatttttcttgcatgaag 149892
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>gb|AC147614.4| Mus musculus BAC clone RP23-399A18 from 7, complete sequence
          Length = 193777

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ccacattatgtgaacccttt 237
              ||||||||||||||||||||
Sbjct: 145663 ccacattatgtgaacccttt 145682
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>gb|AC163633.4| Mus musculus BAC clone RP24-177N8 from chromosome 12, complete sequence
          Length = 178326

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 235    tttacctaaaattttcacaaaaaaggag 262
              |||| ||||||||| |||||||||||||
Sbjct: 145724 tttatctaaaatttccacaaaaaaggag 145697
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>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete
              sequence
          Length = 216238

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 411    acttttcatatagtgtttactcag 434
              |||||||||||||||| |||||||
Sbjct: 175346 acttttcatatagtgtgtactcag 175323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,994,764
Number of Sequences: 3902068
Number of extensions: 5994764
Number of successful extensions: 125446
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125187
Number of HSP's gapped (non-prelim): 253
length of query: 482
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 460
effective length of database: 17,147,199,772
effective search space: 7887711895120
effective search space used: 7887711895120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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