ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3b21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CF010_HUMAN (Q5SRN2) Protein C6orf10 34 0.36
2LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper moti... 29 8.8

>CF010_HUMAN (Q5SRN2) Protein C6orf10|
          Length = 563

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 95  IDRGVATQVGPSIHRRPAGKSCAKDRSGLIIINGAKPRISAPRNGVTQRKRSSVTTS 265
           + RG  +QV  S    P G+     +SGL+++ G + ++     GV +R+ S V  S
Sbjct: 330 VPRGQESQVKKSESGVPKGQEAQVTKSGLVVLKGQEAQVEKSEMGVPRRQESQVKKS 386



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>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing|
           protein)
          Length = 1051

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
 Frame = -1

Query: 403 SLLVKPSSSLNRNT---------WKLQTVLSSVQAAATRH 311
           S+L+KPS S+ RN+         WK  +  S V ++ TRH
Sbjct: 879 SILIKPSDSVERNSHAFPAETIRWKSHSTSSEVASSDTRH 918


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,796,781
Number of Sequences: 219361
Number of extensions: 1946341
Number of successful extensions: 4882
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4882
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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