ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2m17 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase Length = 5593 Score = 959 bits (484), Expect = 0.0 Identities = 487/488 (99%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4749 cggcggccgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 4808 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4809 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 4868 Query: 121 gcgtctgcggcctcgcccagctcgcgtcttaccctgtctagctagctgattcggtcagtg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4869 gcgtctgcggcctcgcccagctcgcgtcttaccctgtctagctagctgattcggtcagtg 4928 Query: 181 gtgcacgtcactggctggctggctacgctacgctataagcaccgtgcgtacctgacacat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4929 gtgcacgtcactggctggctggctacgctacgctataagcaccgtgcgtacctgacacat 4988 Query: 241 ccatggctcatccgatcgactaaactagctagtacataaataatctaaaattaattaaga 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4989 ccatggctcatccgatcgactaaactagctagtacataaataatctaaaattaattaaga 5048 Query: 301 ttgtatgtgtgtgtatacatatagatgtgtagtagtagatgataaatagctactgtgacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5049 ttgtatgtgtgtgtatacatatagatgtgtagtagtagatgataaatagctactgtgacg 5108 Query: 361 acccaagcaagtacagtatgtgcggggttgtttgtattgtatacgtagctgcgtgtgcat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5109 acccaagcaagtacagtatgtgcggggttgtttgtattgtatacgtagctgcgtgtgcat 5168 Query: 421 ttatcatgaaatcatgatgaatttgtacagattggcttgtaggaagttgtgactacagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5169 ttatcatgaaatcatgatgaatttgtacagattggcttgtaggaagttgtgactacagaa 5228 Query: 481 catgtatt 488 |||||||| Sbjct: 5229 catgtatt 5236
>ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1460 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 941 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 1000 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 1001 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 1060 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 1061 gcgcctgcggcatcgc 1076
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Minus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 71553 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 71494 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 71493 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 71434 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 71433 gcgcctgcggcatcgc 71418
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 30732230 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 30732289 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 30732290 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 30732349 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 30732350 gcgcctgcggcatcgc 30732365 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcggtgtccgcggcg 117 |||||||||||||||||||| Sbjct: 27945089 ccgccgcggtgtccgcggcg 27945070 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcggtgtccgcggcg 117 |||||||||||||||||||| Sbjct: 3971525 ccgccgcggtgtccgcggcg 3971506 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcga 24 |||||||||||||||||||| Sbjct: 2453813 ggtcgggtacggcacggcga 2453794
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Minus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 30160 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 30101 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 30100 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 30041 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 30040 gcgcctgcggcatcgc 30025
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 40931 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 40990 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 40991 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 41050 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 41051 gcgcctgcggcatcgc 41066
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| Sbjct: 30823654 cggcggtcgggtacggcacggcgagcgacggcacgggctactggctgatgaagaactcgt 30823713 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggatccgccgcggtgtccgcggcgagg 120 |||||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 30823714 ggggcgcgtcgtggggcgagggcggctacgtcaggatccgccgcggcgtcggccgcgagg 30823773 Query: 121 gcgtctgcggcctcgc 136 ||| ||||||| |||| Sbjct: 30823774 gcgcctgcggcatcgc 30823789 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcggtgtccgcggcg 117 |||||||||||||||||||| Sbjct: 28036413 ccgccgcggtgtccgcggcg 28036394 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 ccgccgcggtgtccgcggcg 117 |||||||||||||||||||| Sbjct: 3971636 ccgccgcggtgtccgcggcg 3971617 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcga 24 |||||||||||||||||||| Sbjct: 2453923 ggtcgggtacggcacggcga 2453904
>ref|XM_474851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 945 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| Sbjct: 779 cggcggtcgggtacggcgtggcgagcgacgggaccaagtactggctgatgaagaactcgt 838 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||| ||||||||| |||| ||||||||||||||| Sbjct: 839 ggggcacgtcgtggggggaggacggctacgtcaggat 875
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| Sbjct: 7213378 cggcggtcgggtacggcgtggcgagcgacgggaccaagtactggctgatgaagaactcgt 7213437 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||| ||||||||| |||| ||||||||||||||| Sbjct: 7213438 ggggcacgtcgtggggggaggacggctacgtcaggat 7213474 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 14184162 gtactggatcatcaagaactcgtggggcg 14184190 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 tagtacataaataatctaaaatta 293 ||||||||||||||| |||||||| Sbjct: 24538904 tagtacataaataatttaaaatta 24538927
>emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035O13, complete sequence Length = 143298 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| Sbjct: 77115 cggcggtcgggtacggcgtggcgagcgacgggaccaagtactggctgatgaagaactcgt 77174 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||| ||||||||| |||| ||||||||||||||| Sbjct: 77175 ggggcacgtcgtggggggaggacggctacgtcaggat 77211
>gb|AY781344.1| Oryza sativa (japonica cultivar-group) putative cysteine protease mRNA, complete cds Length = 1279 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||| Sbjct: 998 cggcggtcgggtacggcgtggcgagcgacgggaccaagtactggctgatgaagaactcgt 1057 Query: 61 ggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||| ||||||||| |||| ||||||||||||||| Sbjct: 1058 ggggcacgtcgtggggggaggacggctacgtcaggat 1094
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/65 (90%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacgg-cgagcgacggcaccaagtactggatcatgaagaactcg 59 ||||||| ||||||||||| | ||||| ||||||||||||||||| | |||||||||||| Sbjct: 22432911 cggcggtggggtacggcaccgacgagc-acggcaccaagtactggctaatgaagaactcg 22432969 Query: 60 tgggg 64 ||||| Sbjct: 22432970 tgggg 22432974 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||| |||||| Sbjct: 4993616 tgtgtgtgtatacatatatatgtgt 4993592 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 gtacataaataatctaaaat 291 |||||||||||||||||||| Sbjct: 22962866 gtacataaataatctaaaat 22962885
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0498C03 Length = 146394 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/65 (90%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacgg-cgagcgacggcaccaagtactggatcatgaagaactcg 59 ||||||| ||||||||||| | ||||| ||||||||||||||||| | |||||||||||| Sbjct: 70044 cggcggtggggtacggcaccgacgagc-acggcaccaagtactggctaatgaagaactcg 70102 Query: 60 tgggg 64 ||||| Sbjct: 70103 tgggg 70107
>dbj|AK067453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106H06, full insert sequence Length = 1365 Score = 65.9 bits (33), Expect = 1e-07 Identities = 59/65 (90%), Gaps = 2/65 (3%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacgg-cgagcgacggcaccaagtactggatcatgaagaactcg 59 ||||||| ||||||||||| | ||||| ||||||||||||||||| | |||||||||||| Sbjct: 1064 cggcggtggggtacggcaccgacgagc-acggcaccaagtactggctaatgaagaactcg 1122 Query: 60 tgggg 64 ||||| Sbjct: 1123 tgggg 1127
>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026D03 map near S2137, complete sequence Length = 115141 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 34024 gacggcaccaagtactggatcgtcaagaactcgtggggcg 34063
>emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease Length = 1440 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 1036 gacggcaccaagtactggatcgtcaagaactcgtggggcg 1075
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 8298376 gacggcaccaagtactggatcgtcaagaactcgtggggcg 8298337 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 34 ccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 |||||||||||| ||| | |||||| |||||| ||| ||||||||| |||||||| Sbjct: 12867482 ccaagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctac 12867537
>dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099K03, full insert sequence Length = 1511 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 1042 gacggcaccaagtactggatcgtcaagaactcgtggggcg 1081
>gb|AY109416.1| Zea mays CL694_1 mRNA sequence Length = 3272 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaac 56 |||| ||||||||||||||||||| ||||||||| | ||||||| | ||||||||| Sbjct: 2763 cggccgtcgggtacggcacggcgaacgacggcacaaggtactggctgatgaagaac 2708
>dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA gene for cysteine endopeptidase, complete cds Length = 3836 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 2558 gacggcaccaagtactggatcgtcaagaactcgtggggcg 2597
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggcg 66 ||||||||||||||||||||| | |||||||||||||||| Sbjct: 8369139 gacggcaccaagtactggatcgtcaagaactcgtggggcg 8369100 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 34 ccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 |||||||||||| ||| | |||||| |||||| ||| ||||||||| |||||||| Sbjct: 12947689 ccaagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctac 12947744
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 19 cggcgagcgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcg 78 |||||||||| ||||||||||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 10054071 cggcgagcgatggcaccaagtattggctggtgaagaactcgtggggcacgacgtggggcg 10054130 Query: 79 agg 81 ||| Sbjct: 10054131 agg 10054133 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 atccgccgcggtgtccgcggcg 117 |||||||||||||||||||||| Sbjct: 22568523 atccgccgcggtgtccgcggcg 22568502 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcga 24 |||||||||||||||||||| Sbjct: 23637353 ggtcgggtacggcacggcga 23637334
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 19 cggcgagcgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcg 78 |||||||||| ||||||||||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 10053956 cggcgagcgatggcaccaagtattggctggtgaagaactcgtggggcacgacgtggggcg 10054015 Query: 79 agg 81 ||| Sbjct: 10054016 agg 10054018 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 atccgccgcggtgtccgcggcg 117 |||||||||||||||||||||| Sbjct: 22496868 atccgccgcggtgtccgcggcg 22496847 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcga 24 |||||||||||||||||||| Sbjct: 23565540 ggtcgggtacggcacggcga 23565521
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 19 cggcgagcgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcg 78 |||||||||| ||||||||||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 108550 cggcgagcgatggcaccaagtattggctggtgaagaactcgtggggcacgacgtggggcg 108491 Query: 79 agg 81 ||| Sbjct: 108490 agg 108488
>emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC OSJNBb0071E08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132906 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 19 cggcgagcgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcg 78 |||||||||| ||||||||||| ||| | ||||||||||||||||| | ||||||||| Sbjct: 4003 cggcgagcgatggcaccaagtattggctggtgaagaactcgtggggcacgacgtggggcg 3944 Query: 79 agg 81 ||| Sbjct: 3943 agg 3941
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA Length = 1437 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 977 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 1036 Query: 61 ggggcg 66 |||||| Sbjct: 1037 ggggcg 1042
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1437 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 977 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 1036 Query: 61 ggggcg 66 |||||| Sbjct: 1037 ggggcg 1042
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 27868875 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 27868934 Query: 61 ggggcg 66 |||||| Sbjct: 27868935 ggggcg 27868940 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gtagtagtagatgataaata 348 |||||||||||||||||||| Sbjct: 15599880 gtagtagtagatgataaata 15599899
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 76953 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 77012 Query: 61 ggggcg 66 |||||| Sbjct: 77013 ggggcg 77018
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full insert sequence Length = 1351 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 891 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 950 Query: 61 ggggcg 66 |||||| Sbjct: 951 ggggcg 956
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full insert sequence Length = 1437 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 977 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 1036 Query: 61 ggggcg 66 |||||| Sbjct: 1037 ggggcg 1042
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full insert sequence Length = 1437 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 1 cggcggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgt 60 ||||||| || ||||||||| || ||||||||||||||||||||| | | |||||||| Sbjct: 977 cggcggtgggctacggcacgacggtggacggcaccaagtactggatcgtcaggaactcgt 1036 Query: 61 ggggcg 66 |||||| Sbjct: 1037 ggggcg 1042
>ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 1005 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 1064 Query: 89 c 89 | Sbjct: 1065 c 1065
>ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-group), P0027G10.55 mRNA Length = 1882 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 1013 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 1072 Query: 89 c 89 | Sbjct: 1073 c 1073
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 12844690 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 12844631 Query: 89 c 89 | Sbjct: 12844630 c 12844630 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 35 caagtactggatcatgaagaactcgtgggg 64 ||||||||||||||| |||||||||||||| Sbjct: 22050584 caagtactggatcatcaagaactcgtgggg 22050555 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 36 aagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 |||||||||||| |||||||||||||||| | | ||||||||| | ||||||| Sbjct: 18948303 aagtactggatcgtgaagaactcgtggggggcggagtggggcgacgccggctac 18948250 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 32 caccaagtactggatcatgaagaactcgtgggg 64 |||||||||||||||| | |||||||||||||| Sbjct: 22126357 caccaagtactggatcgttaagaactcgtgggg 22126325 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatataga 325 |||||||||||||||| ||||||| Sbjct: 7046580 tgtatgtgtgtgtatatatataga 7046603
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 152467 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 152408 Query: 89 c 89 | Sbjct: 152407 c 152407
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 6674 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 6615 Query: 89 c 89 | Sbjct: 6614 c 6614
>dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N05, full insert sequence Length = 1419 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 1005 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 1064 Query: 89 c 89 | Sbjct: 1065 c 1065
>dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041D01, full insert sequence Length = 1882 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 29 cggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggcta 88 |||| |||||||||||| ||| |||||||| |||||| ||| ||||||||| ||||||| Sbjct: 1013 cggcgccaagtactggaccatcaagaactcatggggccagtcatggggcgagcgcggcta 1072 Query: 89 c 89 | Sbjct: 1073 c 1073
>ref|XM_463580.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 921 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 980 Query: 86 ctac 89 |||| Sbjct: 981 ctac 984
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0497A05 Length = 130919 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 50100 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 50159 Query: 86 ctac 89 |||| Sbjct: 50160 ctac 50163
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 39495658 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 39495717 Query: 86 ctac 89 |||| Sbjct: 39495718 ctac 39495721 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgtggg 63 |||||||||||| ||||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 24347789 ggtcgggtacgggacggcgagcgacggcacgccgtactggctgctcaagaactcgtggg 24347731 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 ctaaaattaattaagattgtatgt 308 |||||| ||||||||||||||||| Sbjct: 39914659 ctaaaaataattaagattgtatgt 39914636
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 70672 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 70731 Query: 86 ctac 89 |||| Sbjct: 70732 ctac 70735
>gb|AF099203.1|AF099203 Oryza sativa cysteine endopeptidase precursor (EP3A) gene, complete cds Length = 2588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 1885 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 1944 Query: 86 ctac 89 |||| Sbjct: 1945 ctac 1948
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds Length = 1429 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 931 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 990 Query: 86 ctac 89 |||| Sbjct: 991 ctac 994
>dbj|AB004819.1| Oryza sativa Rep1 gene for cysteine endopeptidase, complete cds Length = 2544 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 26 cgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcgg 85 ||||||||| ||||||||||| | ||||||||||||||| | |||||||||||||| Sbjct: 1847 cgacggcacggagtactggatcgtcaagaactcgtggggcacagcctggggcgagggcgg 1906 Query: 86 ctac 89 |||| Sbjct: 1907 ctac 1910
>ref|NM_192773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1080 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 5 ggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgtggg 63 |||||||||||| ||||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 933 ggtcgggtacgggacggcgagcgacggcacgccgtactggctgctcaagaactcgtggg 991
>emb|Z97023.1|HVZ97023 Hordeum vulgare mRNA encoding cysteine endopeptidase EP-A Length = 1299 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 30 ggcaccaagtactggatcatgaagaactcgtgggg 64 |||||||| ||||||||| |||||||||||||||| Sbjct: 952 ggcaccaaatactggatcgtgaagaactcgtgggg 986
>emb|Z97021.1|HVZ97021 Hordeum vulgare gene encoding cysteine endopeptidase EP-A Length = 2752 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 30 ggcaccaagtactggatcatgaagaactcgtgggg 64 |||||||| ||||||||| |||||||||||||||| Sbjct: 2329 ggcaccaaatactggatcgtgaagaactcgtgggg 2363
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 5 ggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgtggg 63 |||||||||||| ||||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 93693 ggtcgggtacgggacggcgagcgacggcacgccgtactggctgctcaagaactcgtggg 93635
>dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-A05, full insert sequence Length = 1383 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 5 ggtcgggtacggcacggcgagcgacggcaccaagtactggatcatgaagaactcgtggg 63 |||||||||||| ||||||||||||||||| ||||||| | | ||||||||||||| Sbjct: 1013 ggtcgggtacgggacggcgagcgacggcacgccgtactggctgctcaagaactcgtggg 1071
>gb|U94591.1|HVU94591 Hordeum vulgare cysteine proteinase precursor, mRNA, complete cds Length = 1328 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 30 ggcaccaagtactggatcatgaagaactcgtgggg 64 |||||||| ||||||||| |||||||||||||||| Sbjct: 960 ggcaccaaatactggatcgtgaagaactcgtgggg 994
>gb|AY426971.1| Bombyx mori fibroinase precursor, mRNA, complete cds Length = 1026 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcgggtcgtggggcgag 80 |||||| || ||||||||||||||||| | |||||||||||| Sbjct: 907 tactggctcgtgaagaactcgtggggccgctcgtggggcgag 948
>emb|AL161612.13| Human DNA sequence from clone RP11-196P2 on chromosome 13 Contains a novel gene, complete sequence Length = 160145 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||| ||||||| Sbjct: 135575 tgtatgtgtgtgtatacatatatatgtgta 135604 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||| ||||||| Sbjct: 135549 tgtatgtgtgtgtatacatatatatgtgta 135578 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||| ||||||| Sbjct: 135523 tgtatgtgtgtgtatacatatatatgtgta 135552 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||| ||||||| Sbjct: 135497 tgtatgtgtgtgtatacatatatatgtgta 135526 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||| ||||||| Sbjct: 135471 tgtatgtgtgtgtatacatatatatgtgta 135500 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 136089 tgtatgtgtgtgtatacatata 136110 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgta 331 ||||||||||||||||| ||||||| Sbjct: 135700 gtgtgtgtatacatatatatgtgta 135724 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgta 331 ||||||||||||||||| ||||||| Sbjct: 135670 gtgtgtgtatacatatatatgtgta 135694 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgta 331 ||||||||||||||||| ||||||| Sbjct: 135640 gtgtgtgtatacatatatatgtgta 135664 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgta 331 ||||||||||||||||| ||||||| Sbjct: 135610 gtgtgtgtatacatatatatgtgta 135634 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 136059 tatgtgtgtgtatacatata 136078 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 136041 tatgtgtgtgtatacatata 136060 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgt 330 ||||||||||||||||| |||||| Sbjct: 135760 gtgtgtgtatacatatatatgtgt 135783 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 gtgtgtgtatacatatagatgtgt 330 ||||||||||||||||| |||||| Sbjct: 135730 gtgtgtgtatacatatatatgtgt 135753 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 tgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||||| Sbjct: 135451 tgtgtgtatacatatatatgtgta 135474
>gb|S77508.1| cysteine proteinase [Bombyx mori=silkmoths, pupae, eggs, mRNA, 1465 nt] Length = 1465 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcgggtcgtggggcgag 80 |||||| || ||||||||||||||||| | |||||||||||| Sbjct: 946 tactggctcgtgaagaactcgtggggccgctcgtggggcgag 987
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 35 caagtactggatcatgaagaactcgtgggg 64 ||||||||||||||| |||||||||||||| Sbjct: 92648 caagtactggatcatcaagaactcgtgggg 92619
>dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D05, full insert sequence Length = 904 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 35 caagtactggatcatgaagaactcgtgggg 64 ||||||||||||||| |||||||||||||| Sbjct: 573 caagtactggatcatcaagaactcgtgggg 602
>dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138P12, full insert sequence Length = 1322 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 36 aagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 |||||||||||| |||||||||||||||| | | ||||||||| | ||||||| Sbjct: 981 aagtactggatcgtgaagaactcgtggggggcggagtggggcgacgccggctac 1034
>ref|XM_471773.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1146 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 996 gtactggatcatcaagaactcgtggggcg 1024
>gb|AC133203.3| Mus musculus BAC clone RP23-85M7 from chromosome 15, complete sequence Length = 227133 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagat 326 ||||||||||||||||||||||||| Sbjct: 188240 tgtatgtgtgtgtatacatatagat 188264 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 27624 tatgtgtgtgtatacatata 27643
>gb|AC122261.2| Mus musculus BAC clone RP23-187F24 from 15, complete sequence Length = 223801 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagat 326 ||||||||||||||||||||||||| Sbjct: 30844 tgtatgtgtgtgtatacatatagat 30868
>gb|AC102805.6| Mus musculus chromosome 13, clone RP23-74G2, complete sequence Length = 136553 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||||| |||||| Sbjct: 27267 tgtatgtgtgtgtatacatatatatgtgt 27239
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 ||||||||||||| ||||||||||||||| Sbjct: 64114 tgtatgtgtgtgtttacatatagatgtgt 64142
>gb|AC099526.5| Papio anubis clone RP41-308A9, complete sequence Length = 143983 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgt 328 ||||||||||||||||||||||||| Sbjct: 127237 tatgtgtgtgtatacatatagatgt 127261
>emb|AL663007.2|OSJN00206 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0054B09, complete sequence Length = 146506 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 21928 gtactggatcatcaagaactcgtggggcg 21956
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 32 caccaagtactggatcatgaagaactcgtgggg 64 |||||||||||||||| | |||||||||||||| Sbjct: 47850 caccaagtactggatcgttaagaactcgtgggg 47818
>dbj|AK121305.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H18, full insert sequence Length = 1981 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 1564 gtactggatcatcaagaactcgtggggcg 1592
>dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120K15, full insert sequence Length = 1290 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 36 aagtactggatcatgaagaactcgtgggg 64 |||||||||||| |||||||||||||||| Sbjct: 972 aagtactggatcgtgaagaactcgtgggg 1000
>gb|L38514.1|TRBRANGB Trypanosoma rangeli (clone 3) rangelipain gene, 3' end of cds and 5' end of cds Length = 1898 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 111 gtactggatcatcaagaactcgtggggcg 139
>gb|L38513.1|TRBRANGA Trypanosoma rangeli (clone 2) rangelipain gene, 3' end of cds and 5' end of cds Length = 1905 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 111 gtactggatcatcaagaactcgtggggcg 139
>gb|L38512.1|TRBRANG Trypanosoma rangeli (clone 1) rangelipain gene, 3' end of cds and 5' end of cds Length = 1902 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggcg 66 |||||||||||| |||||||||||||||| Sbjct: 111 gtactggatcatcaagaactcgtggggcg 139
>gb|BT017759.1| Zea mays clone EL01N0501D06.c mRNA sequence Length = 1131 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 687 tactggatcatcaagaactcgtggggcg 714
>gb|AC146913.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0013C12 map near S6115, complete sequence Length = 123718 Score = 48.1 bits (24), Expect = 0.027 Identities = 48/56 (85%) Strand = Plus / Plus Query: 34 ccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 |||||||||||| ||| | |||||| |||||| ||| ||||||||| |||||||| Sbjct: 34818 ccaagtactggaccatcatgaactcatggggccagtcatggggcgagcgcggctac 34873
>gb|AC117184.3| Mus musculus BAC clone RP23-37L10 from chromosome 7, complete sequence Length = 187341 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 294 attaagattgtatgtgtgtgtatacata 321 ||||||||||| |||||||||||||||| Sbjct: 8998 attaagattgtgtgtgtgtgtatacata 8971
>gb|AC157597.4| Mus musculus BAC clone RP23-231O9 from chromosome 16, complete sequence Length = 171299 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 305 atgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||||| Sbjct: 81464 atgtgtgtgtatacatatagatgt 81441
>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 181157 Score = 48.1 bits (24), Expect = 0.027 Identities = 30/32 (93%) Strand = Plus / Minus Query: 299 gattgtatgtgtgtgtatacatatagatgtgt 330 ||||||||||||||||||| ||||| |||||| Sbjct: 153413 gattgtatgtgtgtgtatatatatatatgtgt 153382
>emb|X82185.1|ZMCYSPRO Z.mays mRNA for cysteine proteinase Length = 693 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 295 tactggatcatcaagaactcgtggggcg 322
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 294 attaagattgtatgtgtgtgtatacata 321 ||||||||||| |||||||||||||||| Sbjct: 13313 attaagattgtgtgtgtgtgtatacata 13340
>emb|X62163.1|LMLCPA L.mexicana LCPa mRNA for cysteine proteinase Length = 2355 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 2136 gtactggatcgtgaagaactcgtggggc 2163
>emb|AJ420285.1|LIN420285 Leishmania infantum cpa gene for cysteine proteinase Length = 1665 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 999 gtactggatcgtgaagaactcgtggggc 1026
>emb|AJ130942.1|LMA130942 Leishmania major (MRHO/IR/75/ER), amastigote cpa gene encoding cysteine proteinase A Length = 697 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 535 gtactggatcgtgaagaactcgtggggc 562
>gb|AF462226.1| Narcissus pseudonarcissus putative cysteine proteinase mRNA, partial cds Length = 631 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 274 tactggatcatcaagaactcgtggggcg 301
>gb|AF309687.1|AF309687 Leishmania donovani cysteine protease gene, complete cds Length = 1062 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 906 gtactggatcgtgaagaactcgtggggc 933
>gb|AF538038.1| Leishmania mexicana amazonensis cysteine proteinase (cys1) gene, complete cds Length = 1065 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 909 gtactggatcgtgaagaactcgtggggc 936
>gb|AY141759.1| Leishmania mexicana amazonensis clone 2A1 cysteine proteinase mRNA, complete cds Length = 1568 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 957 gtactggatcgtgaagaactcgtggggc 984
>gb|AY141758.1| Leishmania mexicana amazonensis clone 3A4 cysteine proteinase mRNA, complete cds Length = 2431 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 1075 gtactggatcgtgaagaactcgtggggc 1102
>gb|AY028171.1| Leishmania donovani extra chromosome XC290, partial sequence Length = 44273 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 27729 gtactggatcgtgaagaactcgtggggc 27756
>gb|AF004593.2|AF004593 Leishmania donovani chagasi promastigote-specific cysteine protease (ldccys2) gene, complete cds Length = 2684 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 1264 gtactggatcgtgaagaactcgtggggc 1291
>gb|AC007217.5| Homo sapiens chromosome 16 clone RP11-167B4, complete sequence Length = 173929 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||||| ||||||| Sbjct: 141824 tatgtgtgtgtatacatatatatgtgta 141797
>gb|AF242373.1|AF242373 Ipomoea batatas cysteine protease (SPCP2) mRNA, complete cds Length = 1195 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 969 tactggatcatcaagaactcgtggggcg 996
>gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, complete sequence Length = 199514 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 296 taagattgtatgtgtgtgtataca 319 |||||||||||||||||||||||| Sbjct: 97490 taagattgtatgtgtgtgtataca 97467
>gb|AF138266.1|AF138266 Ipomoea batatas papain-like cysteine proteinase isoform III (IBPCPIII) mRNA, complete cds Length = 1144 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 979 tactggatcatcaagaactcgtggggcg 1006
>gb|AF138265.1|AF138265 Ipomoea batatas papain-like cysteine proteinase isoform II (IBPCPII) mRNA, complete cds Length = 1143 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 979 tactggatcatcaagaactcgtggggcg 1006
>gb|AF138264.1|AF138264 Ipomoea batatas papain-like cysteine proteinase isoform I (IBPCPI) mRNA, complete cds Length = 1149 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 985 tactggatcatcaagaactcgtggggcg 1012
>gb|AF216785.1|AF216785 Ipomoea batatas papain-like cysteine proteinase isoform III (PCPIII) gene, complete cds Length = 1473 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 1308 tactggatcatcaagaactcgtggggcg 1335
>gb|AF216784.1|AF216784 Ipomoea batatas papain-like cysteine proteinase isoform II (PCPII) gene, complete cds Length = 1483 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 1319 tactggatcatcaagaactcgtggggcg 1346
>gb|AF216783.1|AF216783 Ipomoea batatas papain-like cysteine proteinase isoform I (PCPI) gene, complete cds Length = 1474 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 1310 tactggatcatcaagaactcgtggggcg 1337
>ref|XM_312033.2| Anopheles gambiae str. PEST ENSANGP00000022503 (ENSANGG00000016224), partial mRNA Length = 880 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||||| ||||||||||||||| Sbjct: 705 gtactggatcatcaagaactcgtggggc 732
>ref|XM_312034.2| Anopheles gambiae str. PEST ENSANGP00000018713 (ENSANGG00000016224), partial mRNA Length = 1636 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||||| ||||||||||||||| Sbjct: 1461 gtactggatcatcaagaactcgtggggc 1488
>tpe|BN000093.1|HVA000093 TPA: TPA_exp: Hordeum vulgare mRNA for putative cysteine proteinase precursor (sf42 gene) Length = 1438 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 1014 tactggatcatcaagaactcgtggggcg 1041
>gb|AY104312.1| Zea mays PCO074362 mRNA sequence Length = 2610 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 1057 tactggatcatcaagaactcgtggggcg 1084
>gb|AC111047.10| Mus musculus chromosome 3, clone RP23-176H24, complete sequence Length = 205473 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tgtgtgtatacatatagatgtgta 331 |||||||||||||||||||||||| Sbjct: 149034 tgtgtgtatacatatagatgtgta 149057
>gb|AC169037.4| Mus musculus BAC clone RP23-85E20 from chromosome 16, complete sequence Length = 184591 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 305 atgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||||| Sbjct: 2880 atgtgtgtgtatacatatagatgt 2857
>gb|L29168.1|LEICYSTPRO Leishmania pifanoi cysteine proteinase gene, complete cds Length = 1377 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtggggc 65 |||||||||| ||||||||||||||||| Sbjct: 1109 gtactggatcgtgaagaactcgtggggc 1136
>dbj|D45402.1|MZECP Corn mRNA for cysteine proteinase, clone CCP, complete cds Length = 1311 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcg 66 ||||||||||| |||||||||||||||| Sbjct: 996 tactggatcatcaagaactcgtggggcg 1023
>gb|AC115905.8| Mus musculus chromosome 1, clone RP24-472N17, complete sequence Length = 173914 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagat 326 ||||||||||||||||||||||| Sbjct: 59705 tatgtgtgtgtatacatatagat 59683
>gb|BT016603.1| Zea mays clone Contig436 mRNA sequence Length = 1526 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggc 65 |||||||||||||||||| | | ||||||||||||||| Sbjct: 1078 gacggcaccaagtactggctggtcaagaactcgtggggc 1116
>gb|AY251054.1| Anthurium andraeanum cysteine protease mRNA, complete cds Length = 1814 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 30 ggcaccaagtactggatcatgaagaactcgtgggg 64 |||||| | ||||||||| |||||||||||||||| Sbjct: 1070 ggcaccgactactggatcgtgaagaactcgtgggg 1104
>gb|AC101796.8| Mus musculus chromosome 1, clone RP24-206P18, complete sequence Length = 171181 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 136900 tgtatgtgtgtgtatacatatatatgt 136874
>gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosome 3, complete sequence Length = 215395 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatag 324 ||||||||||||||||||||||| Sbjct: 199917 tgtatgtgtgtgtatacatatag 199939
>gb|AY504968.1| Iris hollandica putative cysteine protease 3 (CYS3) mRNA, complete cds Length = 1286 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 38 gtactggatcatgaagaactcgtgggg 64 |||||||||||| |||||||||||||| Sbjct: 939 gtactggatcataaagaactcgtgggg 965
>gb|AC133214.3| Mus musculus BAC clone RP23-72A15 from chromosome 10, complete sequence Length = 157067 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 85531 tgtatgtgtgtgtatacatatatatgt 85505
>gb|AC132238.3| Mus musculus BAC clone RP24-532D9 from chromosome 2, complete sequence Length = 164293 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 69855 tatgtgtgtgtatacatatatatgtgt 69829
>gb|AC004626.1|HUAC004626 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-427H10, complete sequence Length = 157838 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 33267 tatgtgtgtgtatacatatatatgtgt 33293
>gb|AC124415.4| Mus musculus BAC clone RP24-298J2 from chromosome 10, complete sequence Length = 160137 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 136134 tgtatgtgtgtgtatacatatatatgt 136160
>ref|XM_536212.2| PREDICTED: Canis familiaris similar to Cathepsin H precursor (LOC479065), mRNA Length = 1206 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggc 65 ||||||||| ||||||||||||||||| Sbjct: 793 tactggatcgtgaagaactcgtggggc 819
>gb|AC161054.3| Mus musculus BAC clone RP23-381H23 from chromosome 10, complete sequence Length = 202932 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 182240 tgtatgtgtgtgtatacatatatatgt 182214
>gb|AC163994.4| Mus musculus chromosome 1, clone RP24-132H2, complete sequence Length = 160383 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 158001 tgtatgtgtgtgtatacatatatatgt 157975
>emb|AL731856.14| Human DNA sequence from clone RP11-647P3 on chromosome 9, complete sequence Length = 51132 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 6198 tatgtgtgtgtatacatatatatgtgt 6172 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 6158 tatgtgtgtgtatacatata 6139
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 39190 tatgtgtgtgtatacatatatatgtgt 39164
>gb|AC130459.2| Homo sapiens chromosome 16 clone CTA-427H10, complete sequence Length = 157462 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 124551 tatgtgtgtgtatacatatatatgtgt 124525
>gb|AC103596.2| Homo sapiens chromosome 1 clone RP4-669H10, complete sequence Length = 121021 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 82466 tgtatgtgtgtgtatacatatatatgt 82492
>gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215577 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagat 326 ||||||||||||||||||||||| Sbjct: 23756 tatgtgtgtgtatacatatagat 23778
>gb|AC109474.2| Homo sapiens chromosome 5 clone RP11-414I19, complete sequence Length = 180650 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 attgtatgtgtgtgtatacatat 322 ||||||||||||||||||||||| Sbjct: 17228 attgtatgtgtgtgtatacatat 17250 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 attgtatgtgtgtgtatacatata 323 |||||||||||||||||| ||||| Sbjct: 70998 attgtatgtgtgtgtatatatata 71021
>gb|AC092295.2| Homo sapiens chromosome 19 clone CTD-2630F21, complete sequence Length = 165566 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 104726 ttgtatgtgtgtgtatacatata 104748
>gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, complete sequence Length = 200418 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 12009 ttgtatgtgtgtgtatacatata 12031
>gb|AC010490.6| Homo sapiens chromosome 5 clone CTD-2333M24, complete sequence Length = 127188 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 300 attgtatgtgtgtgtatacatat 322 ||||||||||||||||||||||| Sbjct: 114224 attgtatgtgtgtgtatacatat 114246
>gb|AC154450.3| Mus musculus BAC clone RP24-169J2 from chromosome 12, complete sequence Length = 168477 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 104809 tatgtgtgtgtatacatatatatgtgt 104835 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 104789 tatgtgtgtgtatacatatatatgtgt 104815
>gb|AC093085.4| Homo sapiens BAC clone RP11-732M2 from 2, complete sequence Length = 97959 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 52862 tatgtgtgtgtatacatatatatgtgt 52836
>gb|AC109135.2| Homo sapiens chromosome 1 clone RP11-240C17, complete sequence Length = 175099 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 83526 tatgtgtgtgtatacatatatatgtgt 83500
>gb|AC138625.1| Homo sapiens chromosome 16 clone RP11-23E19, complete sequence Length = 152884 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 106924 tatgtgtgtgtatacatatatatgtgt 106898
>gb|AC009756.9|AC009756 Homo sapiens, clone RP11-45P2, complete sequence Length = 178624 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 110178 ttgtatgtgtgtgtatacatata 110200 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 9091 tgtatgtgtgtgtatacatata 9070
>gb|AC134575.3| Mus musculus BAC clone RP24-67I21 from chromosome 14, complete sequence Length = 172103 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 atgtgtgtgtatacatatagatgtgta 331 ||||||||||||||||||| ||||||| Sbjct: 145506 atgtgtgtgtatacatatatatgtgta 145532
>dbj|AK109160.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-G07, full insert sequence Length = 1304 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 49 tgaagaactcgtggggcgggtcgtggggcga 79 ||||||||||||||||| |||||||||||| Sbjct: 987 tgaagaactcgtggggcacgtcgtggggcga 1017
>gb|AY112469.1| Zea mays CL13598_-2 mRNA sequence Length = 606 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 27 gacggcaccaagtactggatcatgaagaactcgtggggc 65 |||||||||||||||||| | | ||||||||||||||| Sbjct: 368 gacggcaccaagtactggctggtcaagaactcgtggggc 330
>gb|AY111799.1| Zea mays CL872_-2 mRNA sequence Length = 1761 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||||||| ||||||||||||||||| ||||||||||| ||| |||||| |||| Sbjct: 1070 tactggatcgtgaagaactcgtggggcacccagtggggcgaggccgggtacgtccggat 1128
>gb|AY109437.1| Zea mays CL903_-1 mRNA sequence Length = 1664 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctac 89 ||||||||| | ||||||||||||||| || ||||| |||||||||||| Sbjct: 1025 tactggatcgtcaagaactcgtggggcccttcctggggagagggcggctac 1075
>gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 map 4p16, complete sequence Length = 181571 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 73876 ttgtatgtgtgtgtatacatata 73898
>gb|AF019146.1|AF019146 Zea mays cysteine proteinase Mir2 (mir2) mRNA, complete cds Length = 1761 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtggggcgggtcgtggggcgagggcggctacgtcaggat 97 ||||||||| ||||||||||||||||| ||||||||||| ||| |||||| |||| Sbjct: 1070 tactggatcgtgaagaactcgtggggcacccagtggggcgaggccgggtacgtccggat 1128
>emb|CT010473.14| Mouse DNA sequence from clone RP23-238D5 on chromosome 17, complete sequence Length = 173998 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatag 324 ||||||||||||||||||||||| Sbjct: 71193 tgtatgtgtgtgtatacatatag 71171
>gb|AC138112.4| Mus musculus BAC clone RP24-291E8 from 3, complete sequence Length = 173988 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 300 attgtatgtgtgtgtatacatatagatgtgt 330 ||||| |||||||||||||||||| |||||| Sbjct: 106684 attgtgtgtgtgtgtatacatataaatgtgt 106654
>gb|AC131779.4| Mus musculus BAC clone RP24-336D11 from 8, complete sequence Length = 171978 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 112554 ttgtatgtgtgtgtatacatata 112576
>gb|AC122493.4| Mus musculus BAC clone RP24-392M11 from 3, complete sequence Length = 161477 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatag 324 ||||||||||||||||||||||| Sbjct: 3852 tgtatgtgtgtgtatacatatag 3874
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 305 atgtgtgtgtatacatatagatgtgta 331 ||||||||||||||||||| ||||||| Sbjct: 149640 atgtgtgtgtatacatatatatgtgta 149614
>gb|AC130716.3| Mus musculus BAC clone RP23-463B12 from 3, complete sequence Length = 172517 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgt 328 |||||||||||||||||||||| |||| Sbjct: 78191 tgtatgtgtgtgtatacatatatatgt 78217
>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence Length = 170607 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 45563 tatgtgtgtgtatacatatatatgtgt 45589
>emb|CT476806.2| Pan troglodytes chromosome X BAC RP43-032D14, complete sequence Length = 145919 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgt 328 ||||||||||||||||||||||| Sbjct: 71076 tgtgtgtgtatacatatagatgt 71098
>emb|AL645791.14| Mouse DNA sequence from clone RP23-465A12 on chromosome 11, complete sequence Length = 200883 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 106689 tatgtgtgtgtatacatatatatgtgt 106715 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 106593 tatgtgtgtgtatacatatatatgtgt 106619
>emb|AL772389.10| Mouse DNA sequence from clone RP23-106D7 on chromosome 2, complete sequence Length = 211326 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 201963 tatgtgtgtgtatacatatatatgtgt 201989
>emb|AL833778.5| Mouse DNA sequence from clone RP23-404M22 on chromosome X, complete sequence Length = 199554 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 301 ttgtatgtgtgtgtatacatata 323 ||||||||||||||||||||||| Sbjct: 32693 ttgtatgtgtgtgtatacatata 32715 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 94139 tgtatgtgtgtgtatacatata 94160 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 134595 tatgtgtgtgtatacatata 134614
>gb|AC165089.5| Mus musculus BAC clone RP23-85H2 from chromosome 19, complete sequence Length = 247216 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||||| |||||| Sbjct: 116466 tatgtgtgtgtatacatatatatgtgt 116492
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 119306 tgtatgtgtgtgtatacatata 119327
>ref|NM_120069.3| Arabidopsis thaliana RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type peptidase AT4G39090 (RD19) mRNA, complete cds Length = 2514 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 1126 tactggatcatcaagaactcgtgggg 1151
>ref|NM_120068.3| Arabidopsis thaliana ATPase AT4G39080 mRNA, complete cds Length = 4147 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 3761 tactggatcatcaagaactcgtgggg 3736
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 174863 tgtatgtgtgtgtatacatata 174842
>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence Length = 219218 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 216630 tgtgtgtgtatacatatatatgtgta 216655
>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence Length = 206735 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 56829 tgtgtgtgtatacatatatatgtgta 56804
>ref|NM_187324.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1415 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 1019 tactggatcatcaagaactcgtgggg 1044
>ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1059 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 928 tactggatcatcaagaactcgtgggg 953
>gb|BT018299.1| Zea mays clone EL01T0206B09.c mRNA sequence Length = 1209 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 865 tactggatcatcaagaactcgtgggg 890
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 13218 tgtgtgtgtatacatatatatgtgta 13243
>gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosome 1, complete sequence Length = 223166 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 198016 tgtatgtgtgtgtatacatata 197995
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 58482 tgtatgtgtgtgtatacatata 58461
>gb|AC138741.7| Mus musculus chromosome 1, clone RP24-260D21, complete sequence Length = 161846 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 304 tatgtgtgtgtatacatatagatgtg 329 |||||||||||||||||||| ||||| Sbjct: 101053 tatgtgtgtgtatacatatatatgtg 101028
>gb|AC116399.7| Mus musculus chromosome 8, clone RP23-122B13, complete sequence Length = 167868 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 21462 tgtatgtgtgtgtatacatata 21441
>gb|AC144460.31| Mus musculus strain C57BL/6J clone rp23-109m13, complete sequence Length = 212991 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 100636 tgtatgtgtgtgtatacatata 100615
>gb|AC131989.8| Mus musculus chromosome 14, clone RP24-186N15, complete sequence Length = 180932 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||| ||||||||||||| Sbjct: 88872 tgtgtgtgtatagatatagatgtgta 88847
>gb|AC182645.3| Pan troglodytes BAC clone CH251-7F19 from chromosome 10, complete sequence Length = 221731 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 193594 tgtgtgtgtatacatatatatgtgta 193569 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgta 331 |||||||||||||| ||||| ||||||| Sbjct: 194757 tatgtgtgtgtatatatatatatgtgta 194784
>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence Length = 220806 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 169331 tgtatgtgtgtgtatacatata 169352
>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete sequence Length = 148248 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 133143 tgtatgtgtgtgtatacatata 133122
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 15837 tgtatgtgtgtgtatacatata 15816
>gb|AC119893.9| Mus musculus chromosome 1, clone RP24-225A6, complete sequence Length = 179453 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 173043 tgtatgtgtgtgtatacatata 173022
>gb|AC120787.14| Mus musculus chromosome 15, clone RP24-180L12, complete sequence Length = 156603 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 ||||||||||||||||||| || ||||||| Sbjct: 115308 tgtatgtgtgtgtatacatgtatatgtgta 115337
>gb|AC134576.3| Mus musculus BAC clone RP24-68G10 from chromosome 18, complete sequence Length = 249301 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 116997 tgtatgtgtgtgtatacatata 117018
>gb|AC145571.3| Mus musculus BAC clone RP24-450H18 from chromosome Y, complete sequence Length = 212589 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 60392 tgtatgtgtgtgtatacatata 60371
>gb|DQ192032.1|DQ192032S1 Stizostedion vitreum vitreum putative calpain-like protein gene, exons 1 through 14 Length = 10677 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 10409 tgtatgtgtgtgtatatatatatatgtgta 10438
>gb|AC034116.10| Mus musculus chromosome 16, clone RP23-428P5, complete sequence Length = 210023 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 15161 tgtatgtgtgtgtatacatata 15182
>gb|AC164575.7| Mus musculus 10 BAC RP23-455M6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 196723 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 301 ttgtatgtgtgtgtatacatatagatgtgt 330 ||||||||||||||||| ||||| |||||| Sbjct: 49965 ttgtatgtgtgtgtatatatatatatgtgt 49936
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 66133 tgtatgtgtgtgtatacatata 66154
>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence Length = 227648 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 75824 tgtatgtgtgtgtatacatata 75845
>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence Length = 211758 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 23389 tgtgtgtgtatacatatatatgtgta 23364
>gb|AC138093.7| Mus musculus chromosome 16, clone RP24-559J21, complete sequence Length = 123569 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 2257 tgtatgtgtgtgtatacatata 2236
>gb|AY504966.1| Iris hollandica putative cysteine protease 1 (CYS1) mRNA, complete cds Length = 1171 Score = 44.1 bits (22), Expect = 0.42 Identities = 49/58 (84%) Strand = Plus / Plus Query: 24 agcgacggcaccaagtactggatcatgaagaactcgtggggcgggtcgtggggcgagg 81 |||||||| |||||||||||| | |||||||||| ||||| ||||||||| |||| Sbjct: 880 agcgacggaaccaagtactggttggtgaagaactcatgggggacgtcgtggggtgagg 937
>gb|AC118689.16| Mus musculus chromosome 10, clone RP23-293N21, complete sequence Length = 163917 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 109738 tgtgtgtgtatacatatatatgtgta 109713
>gb|AC131341.3| Mus musculus BAC clone RP24-263O10 from chromosome 17, complete sequence Length = 152220 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 85496 tgtatgtgtgtgtatacatata 85475
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 16274 tgtatgtgtgtgtatacatata 16253
>gb|AC124494.4| Mus musculus BAC clone RP23-464P12 from chromosome 13, complete sequence Length = 204177 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 13036 tgtatgtgtgtgtatacatata 13015
>gb|AC130548.3| Mus musculus BAC clone RP24-456F12 from chromosome 5, complete sequence Length = 170929 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 130044 tgtgtgtgtatacatatatatgtgta 130019
>gb|AC132386.3| Mus musculus BAC clone RP23-438O22 from chromosome 5, complete sequence Length = 170182 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 45275 tgtatgtgtgtgtatacatata 45296
>gb|AC110517.9| Mus musculus chromosome 17, clone RP23-13F15, complete sequence Length = 218657 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 124951 tgtatgtgtgtgtatacatata 124972
>gb|AC123864.4| Mus musculus BAC clone RP23-365B24 from chromosome 8, complete sequence Length = 128447 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 ||||||| |||||||||||||| ||||||| Sbjct: 35287 tgtatgtatgtgtatacatatatatgtgta 35258
>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence Length = 194636 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 110399 tgtatgtgtgtgtatacatata 110420 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 ||||||||||||| |||||||| |||||| Sbjct: 110279 tgtatgtgtgtgtgtacatatatatgtgt 110307 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgt 330 |||||||||||||||||| |||||| Sbjct: 110229 tgtgtgtgtatacatatatatgtgt 110253 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 ||||||||||||| |||||||| |||||| Sbjct: 110203 tgtatgtgtgtgtgtacatatatatgtgt 110231
>gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, complete sequence Length = 195739 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 176562 tgtatgtgtgtgtatacatata 176583
>gb|AC121811.2| Mus musculus BAC clone RP23-453O15 from 5, complete sequence Length = 190798 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 17924 tgtatgtgtgtgtatacatata 17945
>gb|AC121917.2| Mus musculus BAC clone RP24-194F23 from 5, complete sequence Length = 178113 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 9118 tgtatgtgtgtgtatacatata 9097
>gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 3488 tgtatgtgtgtgtatacatata 3509
>gb|AC113502.10| Mus musculus chromosome 8, clone RP23-368K14, complete sequence Length = 171107 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 137452 tgtatgtgtgtgtatacatata 137431
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 36777 tgtatgtgtgtgtatacatata 36756
>emb|CR792428.10| Zebrafish DNA sequence from clone CH211-148F24 in linkage group 3, complete sequence Length = 120268 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 23488 tgtatgtgtgtgtatatatatatatgtgta 23459
>emb|Z98950.1|HS507I15 Human DNA sequence from clone RP3-507I15 on chromosome Xq26.3-27.3 Contains a ribosomal protein L36a (RPL36A) pseudogene, complete sequence Length = 123556 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 94628 tgtatgtgtgtgtatatatatatatgtgta 94657
>emb|Z96811.2|HS52D1 Human DNA sequence from clone RP1-52D1 on chromosome Xq21, complete sequence Length = 148691 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 atgtgtgtgtatacatatagatgtgt 330 ||||||||||||||||||| |||||| Sbjct: 20924 atgtgtgtgtatacatatatatgtgt 20949
>emb|AL590966.10| Human DNA sequence from clone RP11-191N8 on chromosome 1 Contains the DUSP10 gene for dual specificity phosphatase 10 (DUSP10), a novel gene and a CpG island, complete sequence Length = 165588 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 88548 tgtatgtgtgtgtatacatata 88569
>emb|AL590011.5| Human DNA sequence from clone RP11-88K15 on chromosome 6 Contains part of the RAB3IP2 gene for RAB3 interacting protein 2 and one CpG island, complete sequence Length = 154979 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 29281 tgtatgtgtgtgtatacatata 29260
>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a peroxisomal biogenesis factor 12 (PEX12) pseudogene, complete sequence Length = 136943 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 22478 tgtatgtgtgtgtatacatata 22499
>emb|AL359258.23| Human DNA sequence from clone RP11-483I13 on chromosome 1 Contains the 5' end of the SLC25A24 gene for solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24, the gene for a novel protein, two novel genes, a pseudogene similar to solute carrier family 25 (mitochondrial carrier; phosphate carrier) member 24 (SLC25A24) and two CpG islands, complete sequence Length = 188622 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 12528 tgtatgtgtgtgtatacatata 12549
>emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on chromosome 9, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 160343 tgtgtgtgtatacatatatatgtgta 160318
>emb|AL354938.12| Human DNA sequence from clone RP11-86L19 on chromosome 9 Contains the 3' end of the SMC2L1 gene for SMC2 structural maintenance of chromosomes 2-like 1 (yeast) (CAPE, CAP-E, hCAP-E), a novel pseudogene and a CpG island, complete sequence Length = 179738 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 151319 tgtatgtgtgtgtatatatatatatgtgta 151348
>emb|AL354752.11| Human DNA sequence from clone RP11-570O20 on chromosome Xq27.1-27.3, complete sequence Length = 69126 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 17616 tgtatgtgtgtgtatacatata 17637
>emb|AL158812.10| Human DNA sequence from clone RP11-157E11 on chromosome 13, complete sequence Length = 173538 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 37328 tgtatgtgtgtgtatacatata 37307
>emb|AL157389.12| Human DNA sequence from clone RP11-248C1 on chromosome 10 Contains the 3' end of the MPHOSPH1 gene for M-phase phosphoprotein 1, a novel gene (DKFZp434P0810) and a CpG island, complete sequence Length = 134267 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 92498 tgtatgtgtgtgtatacatata 92477
>emb|AL136226.9| Human DNA sequence from clone RP3-486D24 on chromosome 6 Contains a ribosomal protein L7A (RPL7A) pseudogene and a CpG island, complete sequence Length = 72553 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 303 gtatgtgtgtgtatacatatag 324 |||||||||||||||||||||| Sbjct: 22393 gtatgtgtgtgtatacatatag 22372
>emb|AL121916.14|HSJ189G13 Human DNA sequence from clone RP1-189G13 on chromosome 20 Contains the RPL7AL2 gene for ribosomal protein L7a like 2 (pseudogene) and part of a ribosomal protein S4 pseudogene, complete sequence Length = 100167 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 atgtgtgtgtatacatatagatgtgt 330 ||||||||||||||||||| |||||| Sbjct: 64025 atgtgtgtgtatacatatatatgtgt 64050
>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3 Contains a NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a novel gene, complete sequence Length = 213084 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 52417 tgtatgtgtgtgtatatatatatatgtgta 52388
>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence Length = 224295 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 188080 tgtatgtgtgtgtatacatata 188101
>emb|AL035469.7|HS46B1 Human DNA sequence from clone RP1-46B1 on chromosome 6q12, complete sequence Length = 158204 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 99359 tgtatgtgtgtgtatacatata 99338
>emb|AL021997.1|HS874C20 Human DNA sequence from clone RP5-874C20 on chromosome 6p22.1-22.3 Contains the 5' end of a novel protein similar to zinc finger protein 306 (ZNF306, ZFP47), the gene for a novel C2H2 type zinc finger protein, a novel gene, a zinc finger protein SRE-ZBP pseudogene and a CpG island, complete sequence Length = 97847 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 79611 tgtatgtgtgtgtatacatata 79632
>gb|AC093331.9| Homo sapiens chromosome 8, clone RP11-59O2, complete sequence Length = 170974 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 74408 tgtatgtgtgtgtatacatata 74429
>emb|Z99953.1|PVZ99953 Phaseolus vulgaris Moldavian encoding cysteine proteinase precursor (clone cp41) Length = 1376 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 967 tactggatcatcaagaactcgtgggg 992
>gb|AY133844.1| Arabidopsis thaliana clone U11713 putative cysteine proteinase RD19A (At4g39090) mRNA, complete cds Length = 1138 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 970 tactggatcatcaagaactcgtgggg 995
>gb|AY080598.1| Arabidopsis thaliana putative cysteine proteinase RD19A (At4g39090) mRNA, complete cds Length = 1249 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 979 tactggatcatcaagaactcgtgggg 1004
>gb|AC084026.14| Homo sapiens chromosome 8, clone RP11-486M23, complete sequence Length = 185759 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 183947 tgtatgtgtgtgtatacatata 183968
>gb|AC153499.7| Mus musculus 10 BAC RP23-478J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207222 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 42899 tgtgtgtgtatacatatatatgtgta 42924
>gb|AC160021.3| Pan troglodytes BAC clone CH251-564M21 from chromosome unknown, complete sequence Length = 201789 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 ||||||| |||||||||||||||||| Sbjct: 136695 tgtgtgtatatacatatagatgtgta 136720
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 130118 tactggatcatcaagaactcgtgggg 130093
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 39 tactggatcatgaagaactcgtgggg 64 ||||||||||| |||||||||||||| Sbjct: 92108 tactggatcatcaagaactcgtgggg 92083
>emb|BX663528.10| Zebrafish DNA sequence from clone DKEYP-47F9 in linkage group 17, complete sequence Length = 193986 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 99326 tgtatgtgtgtgtatatatatatatgtgta 99297
>emb|AL645609.21| Mouse DNA sequence from clone RP23-432O10 on chromosome 11 Contains the 5' end of the Spred2 gene for sprouty protein with EVH-1 domain 2, related sequence and two CpG islands, complete sequence Length = 121493 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 85271 tgtgtgtgtatacatatatatgtgta 85296
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a protease pseuodogene, complete sequence Length = 189417 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 64344 tgtatgtgtgtgtatacatata 64365
>emb|AL645752.9| Mouse DNA sequence from clone RP23-244K22 on chromosome 11 Contains the 5' end of the Gabra1 gene for gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1, complete sequence Length = 116840 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 75612 tgtatgtgtgtgtatacatata 75591
>emb|AL672209.7| Mouse DNA sequence from clone RP23-296N19 on chromosome 11, complete sequence Length = 17284 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 8441 tgtatgtgtgtgtatacatata 8462
>emb|AL603984.7| Mouse DNA sequence from clone RP23-137B16 on chromosome 11 Contains a novel gene, the 5' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two Cpg islands, complete sequence Length = 224602 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 atgtgtgtgtatacatatagatgtgt 330 ||||||||||||||||||| |||||| Sbjct: 108304 atgtgtgtgtatacatatatatgtgt 108329
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 61248 tgtgtgtgtatacatatatatgtgta 61273
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 125474 tgtatgtgtgtgtatacatata 125495
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 506 tgtatgtgtgtgtatacatata 527
>gb|AC087698.5| Homo sapiens chromosome 8, clone RP11-25K19, complete sequence Length = 150750 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 86159 tgtatgtgtgtgtatacatata 86180
>emb|CR382328.14| Mouse DNA sequence from clone RP23-315J18 on chromosome X, complete sequence Length = 215381 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 21711 tgtatgtgtgtgtatacatata 21690
>gb|AC108519.4| Homo sapiens BAC clone RP11-1286E23 from 4, complete sequence Length = 172366 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 40021 tgtatgtgtgtgtatatatatatatgtgta 40050
>gb|AC099771.9| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-72621, Complete Sequence, complete sequence Length = 256933 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 19306 tgtatgtgtgtgtatacatata 19285
>gb|AC099772.3| Mus Musculus Chromosome 5 RP23-319P12 Strain C57Bl6/J, complete sequence Length = 190514 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 173860 tgtatgtgtgtgtatacatata 173839
>gb|AC104826.5| Homo sapiens BAC clone RP11-775M3 from 4, complete sequence Length = 138604 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 ||||||||||| |||||||||| ||||||| Sbjct: 95576 tgtatgtgtgtatatacatatatatgtgta 95547 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 ||||||||||| |||||||||| ||||||| Sbjct: 95509 tgtatgtgtgtatatacatatatatgtgta 95538
>gb|AC108140.4| Homo sapiens BAC clone RP11-395F4 from 4, complete sequence Length = 41700 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 ||||||||||| |||||||||| ||||||| Sbjct: 30718 tgtatgtgtgtatatacatatacatgtgta 30689
>gb|AC104387.5| Homo sapiens chromosome 11, clone CTD-2566K14, complete sequence Length = 159765 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 39014 tgtatgtgtgtgtatacatata 38993 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatata 323 |||||||||||||||||||| Sbjct: 39037 tatgtgtgtgtatacatata 39056
>gb|AC095061.3| Homo sapiens BAC clone RP11-439C3 from 4, complete sequence Length = 133316 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||| ||||||| ||||||| Sbjct: 24329 tgtatgtgtgtgtacacatatatatgtgta 24358 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||| ||||||| ||||||| Sbjct: 24303 tgtatgtgtgtgtacacatatatatgtgta 24332 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||| ||||||| |||||| Sbjct: 24275 tgtatgtgtgtgtacacatatatatgtgt 24303 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||| ||||||| |||||| Sbjct: 24247 tgtatgtgtgtgtacacatatatatgtgt 24275 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||| ||||||| |||||| Sbjct: 24219 tgtatgtgtgtgtacacatatatatgtgt 24247 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||| ||||||| |||||| Sbjct: 24191 tgtatgtgtgtgtacacatatatatgtgt 24219 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgt 330 |||||||||||||| ||||||| |||||| Sbjct: 24163 tgtatgtgtgtgtacacatatatatgtgt 24191
>gb|AC087466.5| Homo sapiens chromosome 15, clone RP11-97H17, complete sequence Length = 64810 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 18591 tgtatgtgtgtgtatacatata 18570
>gb|AC083934.3| Homo sapiens chromosome 8, clone RP11-108L23, complete sequence Length = 157749 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 33288 tgtatgtgtgtgtatacatata 33309
>dbj|AK138784.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430068H18 product:unclassifiable, full insert sequence Length = 3815 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 3681 tgtgtgtgtatacatatatatgtgta 3656
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatatagatgtgta 331 |||||||||||||||| ||||| ||||||| Sbjct: 106482 tgtatgtgtgtgtatatatatatatgtgta 106511
>gb|AC106787.2| Homo sapiens chromosome 5 clone RP11-365I6, complete sequence Length = 129667 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 85298 tgtatgtgtgtgtatacatata 85277
>gb|AC058822.6| Homo sapiens BAC clone RP11-809N18 from 4, complete sequence Length = 170212 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 302 tgtatgtgtgtgtatacatata 323 |||||||||||||||||||||| Sbjct: 88782 tgtatgtgtgtgtatacatata 88803
>gb|AC182491.2| Pan troglodytes BAC clone CH251-394K8 from chromosome 10, complete sequence Length = 168541 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 306 tgtgtgtgtatacatatagatgtgta 331 |||||||||||||||||| ||||||| Sbjct: 37180 tgtgtgtgtatacatatatatgtgta 37155 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 304 tatgtgtgtgtatacatatagatgtgta 331 |||||||||||||| ||||| ||||||| Sbjct: 38343 tatgtgtgtgtatatatatatatgtgta 38370 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,091,567 Number of Sequences: 3902068 Number of extensions: 5091567 Number of successful extensions: 245523 Number of sequences better than 10.0: 1309 Number of HSP's better than 10.0 without gapping: 1329 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 236821 Number of HSP's gapped (non-prelim): 8661 length of query: 488 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 466 effective length of database: 17,147,199,772 effective search space: 7990595093752 effective search space used: 7990595093752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
