ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2m10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_468164.1| Oryza sativa (japonica cultivar-group), mRNA 149 1e-32
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
3dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
4dbj|AK067937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 1e-32
5ref|NM_125142.2| Arabidopsis thaliana ATP binding / protein kina... 60 8e-06
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
7dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
8ref|NM_101493.2| Arabidopsis thaliana ATP binding / protein kina... 58 3e-05
9dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 58 3e-05
10gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 se... 58 3e-05
11gb|AY108770.1| Zea mays PCO069828 mRNA sequence 48 0.032
12gb|AY738149.1| Zea mays salt-inducible protein kinase mRNA, comp... 46 0.13
13emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chr... 46 0.13
14emb|BX470124.2| Human DNA sequence from clone XX-86143B6 on chro... 46 0.13
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
16dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
17dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18gb|DQ154910.1| Triticum aestivum B genome RAB7 (RAB7) and delta-... 42 2.0
19gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer... 40 7.8
20gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, c... 40 7.8
21gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, com... 40 7.8
22gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chrom... 40 7.8
23gb|AC131336.9| Mus musculus chromosome 1, clone RP23-96A20, comp... 40 7.8
24gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, com... 40 7.8
25ref|XM_542503.2| PREDICTED: Canis familiaris similar to SWA-70 p... 40 7.8
26gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete s... 40 7.8
27emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chr... 40 7.8
28emb|AL353625.5| Human DNA sequence from clone RP11-288H12 on chr... 40 7.8
29emb|AL035416.7|HS782L23 Human DNA sequence from clone RP4-782L23... 40 7.8
30emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12... 40 7.8
31emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2 40 7.8
32emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in ... 40 7.8
33gb|AC116105.12| Mus musculus chromosome 1, clone RP23-23A4, comp... 40 7.8
34gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence 40 7.8
35gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence 40 7.8
36gb|AC113175.2| Homo sapiens chromosome 1 clone RP4-781A20, compl... 40 7.8
37gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, com... 40 7.8
38gb|AC100794.2| Homo sapiens chromosome 18, clone CTD-2559F21, co... 40 7.8
39gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, compl... 40 7.8
40gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, comp... 40 7.8
41ref|NM_001022274.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.8
42gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, comp... 40 7.8
43gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I1... 40 7.8
44gb|AF260580.1|AF260579S2 Mus musculus disabled-2 p96 (Dab2) gene... 40 7.8
45gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Can... 40 7.8
46dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
47gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, comple... 40 7.8
48emb|BX276187.8| Zebrafish DNA sequence from clone DKEY-207F13 in... 40 7.8
49emb|AL954329.7| Zebrafish DNA sequence from clone CH211-226C11 i... 40 7.8
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
51emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8

>ref|XM_468164.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2888

 Score =  149 bits (75), Expect = 1e-32
 Identities = 165/195 (84%)
 Strand = Plus / Plus

                                                                        
Query: 198  agatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagttctgggatcgaatc 257
            |||||||||  |||||||||| |||||  | || ||||| ||||||||||| || ||  |
Sbjct: 1992 agatcaggattctgatgtgcatggaagtggtgagcagcagaaaagttctggaattgaggc 2051

                                                                        
Query: 258  tacacccgctgaagctgaagctttgtctaaaggattacagactataaaaaatgatgatct 317
            |||| |||||||||| |||||||| || |||||| ||||||||||||||||||||||  |
Sbjct: 2052 tacaaccgctgaagcagaagctttatcaaaaggactacagactataaaaaatgatgactt 2111

                                                                        
Query: 318  ggaggaaatcaaagagcttggttcgggtacttatgggtcagtctttcatggtaaatggag 377
            ||||||||| |  ||||| ||||| |||||||||||  |||| |  ||||||||||||||
Sbjct: 2112 ggaggaaattagggagctaggttcaggtacttatggtgcagtttaccatggtaaatggag 2171

                           
Query: 378  gggatgtgatgttgc 392
             ||||||||||||||
Sbjct: 2172 aggatgtgatgttgc 2186



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 65
            |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | 
Sbjct: 1788 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 1847

                                                
Query: 66   tgcctctgttaaaaaggccgcactggaagagtctga 101
            ||| |||||||| ||||| ||| | ||||| |||||
Sbjct: 1848 tgcatctgttaagaaggctgcattagaagattctga 1883



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  149 bits (75), Expect = 1e-32
 Identities = 105/115 (91%)
 Strand = Plus / Plus

                                                                            
Query: 457      gatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgtagtttcattc 516
                ||||||||||||||||||||||| || || || ||||||||||||||||| |||||||| 
Sbjct: 33408876 gatttctggaaagaagctcagattctaagttcacttcatcatccaaatgtggtttcattt 33408935

                                                                       
Query: 517      tatggtgttgttcgtgatggtcctgatggaagcttagcgactgttaccgagttta 571
                |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 33408936 tatggtgtagttcgtgacggtcctgatggaagcttagcaactgttactgagttta 33408990



 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                            
Query: 295      cagactataaaaaatgatgatctggaggaaatcaaagagcttggttcgggtacttatggg 354
                ||||||||||||||||||||  |||||||||| |  ||||| ||||| ||||||||||| 
Sbjct: 33408548 cagactataaaaaatgatgacttggaggaaattagggagctaggttcaggtacttatggt 33408607

                                                                            
Query: 355      tcagtctttcatggtaaatggaggggatgtgatgttgccatcaaaagaataaaagctagt 414
                 |||| |  |||||||||||||| |||||||||||||| || ||||| ||||| ||||| 
Sbjct: 33408608 gcagtttaccatggtaaatggagaggatgtgatgttgctattaaaaggataaaggctagc 33408667

                                                
Query: 415      tgctttgacggaaggccatctgagagagagcg 446
                || ||||  || || |||||||||||||||||
Sbjct: 33408668 tgttttgctggcagaccatctgagagagagcg 33408699



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                            
Query: 185      agaatactgatggagatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagtt 244
                ||||||||| |  |||||||||  |||||||||| |||||  | || ||||| |||||||
Sbjct: 33408354 agaatactggtacagatcaggattctgatgtgcatggaagtggtgagcagcagaaaagtt 33408413

                                                                     
Query: 245      ctgggatcgaatctacacccgctgaagctgaagctttgtctaaaggattacag 297
                |||| || ||  ||||| |||||||||| |||||||| || |||||| |||||
Sbjct: 33408414 ctggaattgaggctacaaccgctgaagcagaagctttatcaaaaggactacag 33408466



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                            
Query: 6        agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 65
                |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | 
Sbjct: 33408087 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 33408146

                                                    
Query: 66       tgcctctgttaaaaaggccgcactggaagagtctga 101
                ||| |||||||| ||||| ||| | ||||| |||||
Sbjct: 33408147 tgcatctgttaagaaggctgcattagaagattctga 33408182



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>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1316_E06
          Length = 110197

 Score =  149 bits (75), Expect = 1e-32
 Identities = 105/115 (91%)
 Strand = Plus / Plus

                                                                         
Query: 457   gatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgtagtttcattc 516
             ||||||||||||||||||||||| || || || ||||||||||||||||| |||||||| 
Sbjct: 39495 gatttctggaaagaagctcagattctaagttcacttcatcatccaaatgtggtttcattt 39554

                                                                    
Query: 517   tatggtgttgttcgtgatggtcctgatggaagcttagcgactgttaccgagttta 571
             |||||||| |||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 39555 tatggtgtagttcgtgacggtcctgatggaagcttagcaactgttactgagttta 39609



 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Plus

                                                                         
Query: 295   cagactataaaaaatgatgatctggaggaaatcaaagagcttggttcgggtacttatggg 354
             ||||||||||||||||||||  |||||||||| |  ||||| ||||| ||||||||||| 
Sbjct: 39167 cagactataaaaaatgatgacttggaggaaattagggagctaggttcaggtacttatggt 39226

                                                                         
Query: 355   tcagtctttcatggtaaatggaggggatgtgatgttgccatcaaaagaataaaagctagt 414
              |||| |  |||||||||||||| |||||||||||||| || ||||| ||||| ||||| 
Sbjct: 39227 gcagtttaccatggtaaatggagaggatgtgatgttgctattaaaaggataaaggctagc 39286

                                             
Query: 415   tgctttgacggaaggccatctgagagagagcg 446
             || ||||  || || |||||||||||||||||
Sbjct: 39287 tgttttgctggcagaccatctgagagagagcg 39318



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 93/113 (82%)
 Strand = Plus / Plus

                                                                         
Query: 185   agaatactgatggagatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagtt 244
             ||||||||| |  |||||||||  |||||||||| |||||  | || ||||| |||||||
Sbjct: 38973 agaatactggtacagatcaggattctgatgtgcatggaagtggtgagcagcagaaaagtt 39032

                                                                  
Query: 245   ctgggatcgaatctacacccgctgaagctgaagctttgtctaaaggattacag 297
             |||| || ||  ||||| |||||||||| |||||||| || |||||| |||||
Sbjct: 39033 ctggaattgaggctacaaccgctgaagcagaagctttatcaaaaggactacag 39085



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                         
Query: 6     agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 65
             |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | 
Sbjct: 38706 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 38765

                                                 
Query: 66    tgcctctgttaaaaaggccgcactggaagagtctga 101
             ||| |||||||| ||||| ||| | ||||| |||||
Sbjct: 38766 tgcatctgttaagaaggctgcattagaagattctga 38801



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>dbj|AK067937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122E21, full
            insert sequence
          Length = 2888

 Score =  149 bits (75), Expect = 1e-32
 Identities = 165/195 (84%)
 Strand = Plus / Plus

                                                                        
Query: 198  agatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagttctgggatcgaatc 257
            |||||||||  |||||||||| |||||  | || ||||| ||||||||||| || ||  |
Sbjct: 1992 agatcaggattctgatgtgcatggaagtggtgagcagcagaaaagttctggaattgaggc 2051

                                                                        
Query: 258  tacacccgctgaagctgaagctttgtctaaaggattacagactataaaaaatgatgatct 317
            |||| |||||||||| |||||||| || |||||| ||||||||||||||||||||||  |
Sbjct: 2052 tacaaccgctgaagcagaagctttatcaaaaggactacagactataaaaaatgatgactt 2111

                                                                        
Query: 318  ggaggaaatcaaagagcttggttcgggtacttatgggtcagtctttcatggtaaatggag 377
            ||||||||| |  ||||| ||||| |||||||||||  |||| |  ||||||||||||||
Sbjct: 2112 ggaggaaattagggagctaggttcaggtacttatggtgcagtttaccatggtaaatggag 2171

                           
Query: 378  gggatgtgatgttgc 392
             ||||||||||||||
Sbjct: 2172 aggatgtgatgttgc 2186



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 78/96 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 65
            |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | 
Sbjct: 1788 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 1847

                                                
Query: 66   tgcctctgttaaaaaggccgcactggaagagtctga 101
            ||| |||||||| ||||| ||| | ||||| |||||
Sbjct: 1848 tgcatctgttaagaaggctgcattagaagattctga 1883



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>ref|NM_125142.2| Arabidopsis thaliana ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT5G57610 mRNA, complete cds
          Length = 3413

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                        
Query: 448  ttgatagcggatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgta 507
            |||||||  ||||| ||||||||||| | | |  |||||||  | |||||||||||||| 
Sbjct: 2473 ttgatagaagatttttggaaagaagccctgttattgagctcattgcatcatccaaatgtt 2532

                                                  
Query: 508  gtttcattctatggtgttgttcgtgatggtcctgatgg 545
            || || ||||||||  | ||||||||||||||||||||
Sbjct: 2533 gtgtcgttctatgggatagttcgtgatggtcctgatgg 2570



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                          
Query: 363      tcatggtaaatggaggggatgtgatgttgccatcaaaagaat 404
                |||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 26018766 tcatggtaaatggaggggatctgatgttgctattaaaagaat 26018807



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>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1226_A12
          Length = 113025

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                       
Query: 363   tcatggtaaatggaggggatgtgatgttgccatcaaaagaat 404
             |||||||||||||||||||| ||||||||| || ||||||||
Sbjct: 56624 tcatggtaaatggaggggatctgatgttgctattaaaagaat 56665



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>ref|NM_101493.2| Arabidopsis thaliana ATP binding / protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT1G16270 mRNA, complete cds
          Length = 3667

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 363  tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
            ||||||||||||||| ||||  ||||||||||||||||| |||||
Sbjct: 2634 tcatggtaaatggagaggatcagatgttgccatcaaaaggataaa 2678



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                   
Query: 489  gcttcatcatccaaatgtagtttcattctatggtgttgt 527
            |||||||||||||||||| ||| |||| |||||||||||
Sbjct: 2760 gcttcatcatccaaatgtggttgcattttatggtgttgt 2798



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>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 493   catcatccaaatgtagtttcattctatggtgttgttcgtgatggtcctgatgg 545
             |||||||||||||| || || ||||||||  | ||||||||||||||||||||
Sbjct: 59046 catcatccaaatgttgtgtcgttctatgggatagttcgtgatggtcctgatgg 59098



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>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence
          Length = 114498

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                          
Query: 363   tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
             ||||||||||||||| ||||  ||||||||||||||||| |||||
Sbjct: 21784 tcatggtaaatggagaggatcagatgttgccatcaaaaggataaa 21828



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 489   gcttcatcatccaaatgtagtttcattctatggtgttgt 527
             |||||||||||||||||| ||| |||| |||||||||||
Sbjct: 22035 gcttcatcatccaaatgtggttgcattttatggtgttgt 22073



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>gb|AY108770.1| Zea mays PCO069828 mRNA sequence
          Length = 1493

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 329 aagagcttggttcgggtacttatgggtcagtctttcatggtaaatggaggggatgtgatg 388
           ||||||||||||| || |||| |||  | |||| ||||||||||||||| ||   |||||
Sbjct: 57  aagagcttggttctggaacttttggaactgtctatcatggtaaatggagaggcactgatg 116

                           
Query: 389 ttgccatcaaaagaat 404
           |||| || ||||||||
Sbjct: 117 ttgcaataaaaagaat 132



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>gb|AY738149.1| Zea mays salt-inducible protein kinase mRNA, complete cds
          Length = 972

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 489 gcttcatcatccaaatgtagtttcattctatggtgttgt 527
           |||||||||||||||||| ||  |||| |||||||||||
Sbjct: 309 gcttcatcatccaaatgttgtggcattttatggtgttgt 347



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 364 catggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
           ||||| |||||||||||  ||||||| ||||| || ||||||||
Sbjct: 184 catggaaaatggaggggcagtgatgtagccattaagagaataaa 227



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>emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chromosome 1, complete
             sequence
          Length = 66303

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 94    gagtctgagaagccagtagaggttcag 120
             ||||||||||||||||| |||||||||
Sbjct: 29151 gagtctgagaagccagtggaggttcag 29125



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>emb|BX470124.2| Human DNA sequence from clone XX-86143B6 on chromosome 1, complete
            sequence
          Length = 23128

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 94   gagtctgagaagccagtagaggttcag 120
            ||||||||||||||||| |||||||||
Sbjct: 3914 gagtctgagaagccagtggaggttcag 3888



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 363      tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
                |||||| |||||||||||| ||||||| || || || ||||||||
Sbjct: 14675525 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 14675569



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>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           PAC clone:P0443H10
          Length = 144695

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                        
Query: 363 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
           |||||| |||||||||||| ||||||| || || || ||||||||
Sbjct: 292 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 336



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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 363   tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 407
             |||||| |||||||||||| ||||||| || || || ||||||||
Sbjct: 68523 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 68567



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>gb|DQ154910.1| Triticum aestivum B genome RAB7 (RAB7) and
            delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH)
            genes, partial sequence
          Length = 1900

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 516  ctatggtgttgttcgtgatgg 536
            |||||||||||||||||||||
Sbjct: 1135 ctatggtgttgttcgtgatgg 1115



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>gb|AC153729.1| Mus musculus  BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 250801

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    gaagccagtagaggttcagc 121
              ||||||||||||||||||||
Sbjct: 216084 gaagccagtagaggttcagc 216103



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>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence
          Length = 171004

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    gagtctgagaagccagtaga 113
             ||||||||||||||||||||
Sbjct: 38151 gagtctgagaagccagtaga 38132



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>gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, complete sequence
          Length = 131719

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 299   ctataaaaaatgatgatctggaggaaat 326
             ||||| |||||||||| |||||||||||
Sbjct: 46473 ctatagaaaatgatgagctggaggaaat 46500



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>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete
              sequence
          Length = 176398

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    aaagatggaaagaagtttga 182
              ||||||||||||||||||||
Sbjct: 151515 aaagatggaaagaagtttga 151496



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>gb|AC131336.9| Mus musculus chromosome 1, clone RP23-96A20, complete sequence
          Length = 121355

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   ttctggaaagaagctcagat 479
             ||||||||||||||||||||
Sbjct: 86009 ttctggaaagaagctcagat 86028



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>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence
          Length = 169244

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 299   ctataaaaaatgatgatctggaggaaat 326
             ||||| |||||||||| |||||||||||
Sbjct: 58128 ctatagaaaatgatgagctggaggaaat 58101



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>ref|XM_542503.2| PREDICTED: Canis familiaris similar to SWA-70 protein (LOC485385),
            mRNA
          Length = 2001

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  tgacaaagatggaaagaagt 178
            ||||||||||||||||||||
Sbjct: 1041 tgacaaagatggaaagaagt 1060



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>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence
          Length = 127696

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 363    tcatggtaaatggaggggatgtgatgttgccatcaa 398
              |||||| ||||||||||||  ||||||||| |||||
Sbjct: 116641 tcatggaaaatggaggggaactgatgttgcaatcaa 116676



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>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a
              novel gene, complete sequence
          Length = 183342

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     ctgttaaaaaggccgcactggaag 94
              |||||||||||||| |||||||||
Sbjct: 142641 ctgttaaaaaggcctcactggaag 142618



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>emb|AL353625.5| Human DNA sequence from clone RP11-288H12 on chromosome 6 Contains the 3'
              end of the IGF2R gene for insulin-like growth factor 2
              receptor (cation-independent mannose-6 phosphate receptor,
              Insulin-like growth factor-2 receptor (mannose-6-phosphate
              receptor, cation-independent))(MPRI, CD222, CIMPR, M6P-R),
              the SLC22A1 gene for solute carrier family 22 (organic
              cation  transporter), member 1 (OCT1), a calcium binding
              protein P22 (calcineurin B homolog, SLC9A1 binding protein,
              calcineurin homologous protein) (CHP) (SLC9A1BP) pseudogene
              and two CpG islands, complete sequence
          Length = 148250

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    tggaaagaagctcagatcct 482
              ||||||||||||||||||||
Sbjct: 129896 tggaaagaagctcagatcct 129877



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>emb|AL035416.7|HS782L23 Human DNA sequence from clone RP4-782L23 on chromosome 1p31.2-33
             Contains the 3' end of a novel gene (FLJ10986), two novel
             genes, the 5' end of the HOOK1 gene for hook homolog 1
             (Drosophila) and a CpG island, complete sequence
          Length = 123925

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    ggagaacagattaaatttcc 52
             ||||||||||||||||||||
Sbjct: 23703 ggagaacagattaaatttcc 23722



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>emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12 on chromosome 6q24 Contains
            the gene for hHDC for homolog of Drosophila headcase
            (LOC51696) and part of a novel gene, complete sequence
          Length = 126464

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 497  atccaaatgtagtttcattctatg 520
            ||||||||||||| ||||||||||
Sbjct: 7670 atccaaatgtagtatcattctatg 7647



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>emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2
          Length = 38585

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   aaatgatgatctggaggaaa 325
             ||||||||||||||||||||
Sbjct: 13498 aaatgatgatctggaggaaa 13517



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>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21,
              complete sequence
          Length = 217310

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 292    ttacagactataaaaaatga 311
              ||||||||||||||||||||
Sbjct: 209876 ttacagactataaaaaatga 209857



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>gb|AC116105.12| Mus musculus chromosome 1, clone RP23-23A4, complete sequence
          Length = 214780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 460    ttctggaaagaagctcagat 479
              ||||||||||||||||||||
Sbjct: 198542 ttctggaaagaagctcagat 198523



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>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence
          Length = 196097

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    aaagatggaaagaagtttga 182
              ||||||||||||||||||||
Sbjct: 128168 aaagatggaaagaagtttga 128149



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>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence
          Length = 184706

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    aaagatggaaagaagtttga 182
              ||||||||||||||||||||
Sbjct: 119354 aaagatggaaagaagtttga 119373



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>gb|AC113175.2| Homo sapiens chromosome 1 clone RP4-781A20, complete sequence
          Length = 127627

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ggagaacagattaaatttcc 52
             ||||||||||||||||||||
Sbjct: 10424 ggagaacagattaaatttcc 10405



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>gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, complete sequence
          Length = 146286

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    atgacaaagatggaaagaag 177
              ||||||||||||||||||||
Sbjct: 113330 atgacaaagatggaaagaag 113311



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>gb|AC100794.2| Homo sapiens chromosome 18, clone CTD-2559F21, complete sequence
          Length = 143575

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   atgacaaagatggaaagaag 177
             ||||||||||||||||||||
Sbjct: 22750 atgacaaagatggaaagaag 22731



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>gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, complete sequence
          Length = 101220

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   cttatgggtcagtctttcat 366
             ||||||||||||||||||||
Sbjct: 89200 cttatgggtcagtctttcat 89219



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>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence
          Length = 219258

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    cttatgggtcagtctttcat 366
              ||||||||||||||||||||
Sbjct: 151713 cttatgggtcagtctttcat 151732



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>ref|NM_001022274.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC25H2.13c),
            partial mRNA
          Length = 6600

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 306  aaatgatgatctggaggaaa 325
            ||||||||||||||||||||
Sbjct: 5202 aaatgatgatctggaggaaa 5221



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>gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, complete sequence
          Length = 134365

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   cttatgggtcagtctttcat 366
             ||||||||||||||||||||
Sbjct: 55989 cttatgggtcagtctttcat 55970



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>gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I11, complete sequence
          Length = 195433

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   cttatgggtcagtctttcat 366
             ||||||||||||||||||||
Sbjct: 91986 cttatgggtcagtctttcat 92005



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>gb|AF260580.1|AF260579S2 Mus musculus disabled-2 p96 (Dab2) gene, exons 2 through 15, and
             complete cds
          Length = 29517

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    gagtctgagaagccagtaga 113
             ||||||||||||||||||||
Sbjct: 20578 gagtctgagaagccagtaga 20597



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>gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162273

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   aaatgatgatctggaggaaa 325
             ||||||||||||||||||||
Sbjct: 89575 aaatgatgatctggaggaaa 89594



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 493      catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 536
                |||||||||||||| ||| | |||||||| || |||| ||||||
Sbjct: 24982720 catcatccaaatgttgttgctttctatggggtggttcctgatgg 24982763



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>gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, complete sequence
          Length = 195280

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  aaagatggaaagaagtttga 182
            ||||||||||||||||||||
Sbjct: 4902 aaagatggaaagaagtttga 4883



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>emb|BX276187.8| Zebrafish DNA sequence from clone DKEY-207F13 in linkage group 8,
             complete sequence
          Length = 159887

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   gaaggccatctgagagagag 444
             ||||||||||||||||||||
Sbjct: 87432 gaaggccatctgagagagag 87413



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>emb|AL954329.7| Zebrafish DNA sequence from clone CH211-226C11 in linkage group 23,
              complete sequence
          Length = 194284

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 389    ttgccatcaaaagaataaaa 408
              ||||||||||||||||||||
Sbjct: 129468 ttgccatcaaaagaataaaa 129487



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 493      catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 536
                |||||||||||||| ||| | |||||||| || |||| ||||||
Sbjct: 24910926 catcatccaaatgttgttgctttctatggggtggttcctgatgg 24910969



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>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146686

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 493    catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 536
              |||||||||||||| ||| | |||||||| || |||| ||||||
Sbjct: 124447 catcatccaaatgttgttgctttctatggggtggttcctgatgg 124404


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,721,479
Number of Sequences: 3902068
Number of extensions: 5721479
Number of successful extensions: 128870
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128617
Number of HSP's gapped (non-prelim): 252
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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