>POLR_ASGVP (P36309) Genome polyprotein (241 kDa polyprotein) (ORF1|
           polyprotein) [Contains: Putative RNA-directed RNA
           polymerase/Helicase (EC 2.7.7.48) (EC 3.6.1.-); Coat
           protein]
          Length = 2105

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 225 TPSSLPLLTTHAFFLPSKQTDSHSHPIS 308
           TP    LLT H   L      SHSHPIS
Sbjct: 48  TPEDQELLTKHGLTLAPIGFKSHSHPIS 75


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,675,254
Number of Sequences: 219361
Number of extensions: 410844
Number of successful extensions: 1032
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)