ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2m03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 1229 bits (620), Expect = 0.0 Identities = 634/638 (99%), Gaps = 3/638 (0%) Strand = Plus / Plus Query: 1 cttaacacttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccg 60 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 912 cttaacacttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccg 971 Query: 61 ccctctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 ccctctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagca 1031 Query: 121 gcagaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1032 gcagaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccg 1091 Query: 181 tggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1092 tggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcc 1151 Query: 241 tgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 tgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcg 1211 Query: 301 agaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 agaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 1271 Query: 361 ccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 ccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccg 1331 Query: 421 gcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagcccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1332 gcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagcccc 1391 Query: 481 acgctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1392 acgctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggt 1451 Query: 541 cgattgatcgctcaaattggacgtgtcgtcatgcatgcatcatattgattaattgtacgc 600 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1452 cgattgatcgctcaaattggacgtgtcg---tgcatgcatcatattgattaattgtacgc 1508 Query: 601 tatatgtatgtatatgttttctactctactctactcta 638 |||||||||||||||||||||||||||||||||||||| Sbjct: 1509 tatatgtatgtatatgttttctactctactctactcta 1546
>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor Length = 662 Score = 1223 bits (617), Expect = 0.0 Identities = 631/635 (99%), Gaps = 3/635 (0%) Strand = Plus / Plus Query: 4 aacacttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccgccc 63 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aacacttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccgccc 60 Query: 64 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 120 Query: 124 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 180 Query: 184 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 240 Query: 244 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 300 Query: 304 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 360 Query: 364 tgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcg 420 Query: 424 agaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacg 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacg 480 Query: 484 ctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcga 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcga 540 Query: 544 ttgatcgctcaaattggacgtgtcgtcatgcatgcatcatattgattaattgtacgctat 603 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 541 ttgatcgctcaaattggacgtgtcg---tgcatgcatcatattgattaattgtacgctat 597 Query: 604 atgtatgtatatgttttctactctactctactcta 638 ||||||||||||||||||||||||||||||||||| Sbjct: 598 atgtatgtatatgttttctactctactctactcta 632
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 148996 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 148940 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 148939 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 148880 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 148879 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 148820 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 148819 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 148760 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 148759 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 148700 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 148699 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 148657
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 13892 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 13836 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 13835 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 13776 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 13775 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 13716 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 13715 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 13656 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 13655 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 13596 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 13595 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 13553
>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full insert sequence Length = 703 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 193 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 249 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 250 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 309 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 310 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 369 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 370 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 429 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 430 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 489 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 490 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 532
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 71546 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 71602 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 71603 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 71662 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 71663 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 71722 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 71723 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 71782 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 71783 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 71842 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 71843 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 71885
>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 676 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 175 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 231 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 232 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 291 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 292 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 351 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 352 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 411 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 412 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 471 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 472 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 514
>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 745 Score = 337 bits (170), Expect = 3e-89 Identities = 300/343 (87%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 180 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 239 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 187 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 243 Query: 240 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 299 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 244 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 303 Query: 300 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 359 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 304 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacaaggac 363 Query: 360 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 419 || || || ||||||| || | ||||| || || |||||||||||||||||||||||| Sbjct: 364 gcggttccgagcggcgtcaacttgtccaaaatatcgcaggaggagtacctcaacgccccc 423 Query: 420 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 479 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 424 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggnttctactgcgagccg 483 Query: 480 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 522 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 484 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 526
>gb|AY104253.1| Zea mays PCO133617 mRNA sequence Length = 1001 Score = 246 bits (124), Expect = 8e-62 Identities = 238/276 (86%) Strand = Plus / Plus Query: 254 cggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagaccatcacctt 313 ||||| ||| || |||||||||| | | |||| ||||||||||||||| |||||||| || Sbjct: 462 cggcgggctcgtcttcgagcccagccagttcaccgtcaaggccggcgacaccatcacatt 521 Query: 314 caagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctccgg 373 ||||||||||||||| | |||||||||||| || |||||||| |||| ||||| ||| Sbjct: 522 caagaacaacgccggcttcccgcacaacgtcgtcttcgacgaagacgaggtgccgagcgg 581 Query: 374 cgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgagaccttctc 433 |||||||| | |||||||||| |||||||||||||||||||| || |||||||||| ||| Sbjct: 582 cgtcgacgccaccaagatctcgcaggaggagtacctcaacgcgccaggcgagacctactc 641 Query: 434 cgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctggggccgg 493 ||||||||||||||| || || ||||||||||||||||||||||| || || ||||| Sbjct: 642 cgtcaccctcaccgtgccgggaacctacggcttctactgcgagccgcatcaaggagccgg 701 Query: 494 catggtcggaaaggtcaccgtcaactaatgaagcta 529 |||||||| ||| ||||||||||||||| |||||| Sbjct: 702 aatggtcggcaagatcaccgtcaactaattaagcta 737
>dbj|AB252146.1| Triticum aestivum Tamyb3 mRNA for myb-related protein, partial cds Length = 825 Score = 99.6 bits (50), Expect = 1e-17 Identities = 60/62 (96%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 42 tagcaagcagccatggccgccctctcctctgcag-ccgtgtccgtcccttccttcgccgc 100 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133 tagctagcagccatggccgccctctcctctgcagcccgtgtccgtcccttccttcgccgc 74 Query: 101 cg 102 || Sbjct: 73 cg 72 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 126 agcagcaggatggttgtgcgcgcttccctgg 156 |||||||||||||| |||||||| ||||||| Sbjct: 47 agcagcaggatggtggtgcgcgcgtccctgg 17
>gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, complete cds; nuclear gene for plastid product Length = 787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 451 ccggcacctacggcttctactgcgagccccacgctggggccggcatg 497 ||||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 390 ccggcacatacggcgtctactgcgagccccatgctggcgccggcatg 436
>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 358 ||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 320 ttcaagaacaacgccgggttcccgcacaatgtgttgttcgatgagga 366
>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter AT1G76100 mRNA, complete cds Length = 771 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 326 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 374
>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 516 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 301 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 349
>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment Length = 16202 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 8687 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 8735
>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 746 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 337 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 385
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 10610 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 10562
>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor Length = 773 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 306 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 358 |||||||||||||||||||| |||| ||| ||||| || || ||||||||||| Sbjct: 350 atcaccttcaagaacaacgctgggttcccacacaatgtcgtcttcgacgagga 402
>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds Length = 1447 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 957 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 1005
>emb|X04693.1|SOPCG Spinach gene for plastocyanin Length = 1000 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctcc 371 ||||||||||| ||||| | ||| |||||||| ||||| |||||||||| | |||||| Sbjct: 542 ttcaagaacaatgccggattcccccacaacgtagtgtttgacgaggacgagattccctcc 601 Query: 372 ggcgtcgacg 381 || ||||||| Sbjct: 602 ggtgtcgacg 611
>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence Length = 701 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 360 ||||||||||| || |||| ||| |||||||| |||||||| ||||||| Sbjct: 343 ttcaagaacaatgctgggttcccacacaacgttgtgttcgatgaggacg 391
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 48.1 bits (24), Expect = 0.037 Identities = 27/28 (96%) Strand = Plus / Plus Query: 167 cgccagcgcggccgtggccatggccgcc 194 |||||||||||| ||||||||||||||| Sbjct: 3177030 cgccagcgcggcggtggccatggccgcc 3177057
>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds Length = 577 Score = 48.1 bits (24), Expect = 0.037 Identities = 72/88 (81%) Strand = Plus / Plus Query: 289 tcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgt 348 ||||| ||||||||||| | | |||| ||||||||| || | ||| |||||| | || | Sbjct: 227 tcaagtccggcgagaccgtgaacttcgtgaacaacgctggcttcccccacaacatcgtct 286 Query: 349 tcgacgaggacgccgtgccctccggcgt 376 |||||||||| ||| | ||||||||||| Sbjct: 287 tcgacgaggatgccatcccctccggcgt 314 Score = 44.1 bits (22), Expect = 0.57 Identities = 79/98 (80%) Strand = Plus / Plus Query: 405 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 464 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 343 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 402 Query: 465 ttctactgcgagccccacgctggggccggcatggtcgg 502 | |||||||||||||||| || || ||||||||||| Sbjct: 403 tactactgcgagccccaccagggcgctggcatggtcgg 440
>gb|DQ213132.1| Taeniopygia guttata clone 0058P0029F06 KIAA0878-like mRNA, complete sequence Length = 757 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 114 cgcagcagcagaagcagcaggat 136 ||||||||||||||||||||||| Sbjct: 141 cgcagcagcagaagcagcaggat 119
>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b Length = 699 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 311 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgc 361 |||||||||||| ||||||| ||| || ||||| | |||||||||||||| Sbjct: 322 cttcaagaacaatgccgggttcccacataacgttctcttcgacgaggacgc 372
>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone BACR28I14, complete sequence Length = 161601 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgttttcta 623 ||||||||||||||||||||||| Sbjct: 14878 tatatgtatgtatatgttttcta 14856
>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR44K17, complete sequence Length = 166863 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgttttcta 623 ||||||||||||||||||||||| Sbjct: 137841 tatatgtatgtatatgttttcta 137819
>gb|AE003695.2| Drosophila melanogaster chromosome 3R, section 33 of 118 of the complete sequence Length = 225655 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgttttcta 623 ||||||||||||||||||||||| Sbjct: 169136 tatatgtatgtatatgttttcta 169114
>gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-transferase gene Length = 14707 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgttttcta 623 ||||||||||||||||||||||| Sbjct: 8840 tatatgtatgtatatgttttcta 8862
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Minus Query: 453 ggcacctacggcttctactgcgagccccacgctggggccggcatggtcgg 502 |||||||||| || |||||||||||||||| || || ||||||||||| Sbjct: 962984 ggcacctacgactactactgcgagccccaccgcggtgctggcatggtcgg 962935
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 467 ctactgcgagccccacgctggggccggcatggtcggaaaggt 508 |||||||||||||||| ||| ||||||||||| || ||||| Sbjct: 903783 ctactgcgagccccaccgtggtgccggcatggttggcaaggt 903742
>ref|XM_510225.1| PREDICTED: Pan troglodytes similar to Tm9sf1 protein (LOC453233), mRNA Length = 1542 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1008 cagaagcagcaggatggttgtg 987
>ref|NM_001014842.1| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 2, mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>ref|NM_006405.5| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 1, mRNA Length = 2449 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>emb|CR859801.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1634 (from clone DKFZp469F1634) Length = 2227 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1370 cagaagcagcaggatggttgtg 1349
>emb|BX161390.1|CNSLT1I7O human full-length cDNA clone CS0DC007YI17 of Neuroblastoma of Homo sapiens (human) Length = 2354 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1576 cagaagcagcaggatggttgtg 1555
>gb|BC010856.2| Homo sapiens transmembrane 9 superfamily member 1, transcript variant 1, mRNA (cDNA clone MGC:9160 IMAGE:3899246), complete cds Length = 2121 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1265 cagaagcagcaggatggttgtg 1244
>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA, complete cds; nuclear gene for chloroplast product Length = 620 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Plus Query: 405 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 464 ||||| ||||||||||||||||||| ||| ||| || ||| | ||||| |||||| Sbjct: 364 tacctgaacgcccccggcgagacctactcgctcaagctgaccaccgccggcgagtacggc 423 Query: 465 ttctactgcgagccccac 482 | |||||||||||||||| Sbjct: 424 tactactgcgagccccac 441 Score = 44.1 bits (22), Expect = 0.57 Identities = 73/90 (81%) Strand = Plus / Plus Query: 287 cgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggt 346 ||||||| ||||||||||||| | |||| ||||||||| || | ||| |||||| | || Sbjct: 246 cgtcaagtccggcgagaccattaacttcgtgaacaacgctggcttcccccacaacatcgt 305 Query: 347 gttcgacgaggacgccgtgccctccggcgt 376 ||||| ||||| ||| | ||||| ||||| Sbjct: 306 cttcgatgaggatgccatcccctcgggcgt 335
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 617 ttttctactctactctactcta 638 |||||||||||||||||||||| Sbjct: 79575 ttttctactctactctactcta 79554
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gccggcgccatgctgctgggcg 213 |||||||||||||||||||||| Sbjct: 4921238 gccggcgccatgctgctgggcg 4921217
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence Length = 152059 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 ccggcgagaccatcaccttcaa 316 |||||||||||||||||||||| Sbjct: 108213 ccggcgagaccatcaccttcaa 108234
>emb|CR621520.1| full-length cDNA clone CS0DI012YJ08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1903 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1386 cagaagcagcaggatggttgtg 1365
>emb|CR618221.1| full-length cDNA clone CS0DC014YA08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2107 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1311 cagaagcagcaggatggttgtg 1290
>emb|CR614922.1| full-length cDNA clone CS0DI016YC09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1806 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1021 cagaagcagcaggatggttgtg 1000
>emb|CR606704.1| full-length cDNA clone CS0DI067YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2167 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1367 cagaagcagcaggatggttgtg 1346
>emb|CR604869.1| full-length cDNA clone CS0DA001YH23 of Neuroblastoma of Homo sapiens (human) Length = 2136 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1310 cagaagcagcaggatggttgtg 1289
>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306, section 468 of 469 of the complete genome Length = 10947 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gccggcgccatgctgctgggcg 213 |||||||||||||||||||||| Sbjct: 5924 gccggcgccatgctgctgggcg 5903
>gb|DQ207951.1| Comamonas sp. CNB-1 putative regulatory protein (cnbR), putative ferredoxin (orf1), 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit (cnbCa), 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit (cnbCb), 2-amino-5-chloromuconic semialdehyde dehydrogenase (cnbD), putative 2-keto-4-pentenoate hydratase (cnbE), putative 4-oxalocrotonate decarboxylase (cnbF), 4-oxalocrotonate tautomerase (cnbG), 2-amino-5-chloromuconate deaminase (cnbH), and putative 2-keto-4-pentenoate hydratase (cnbI) genes, complete cds Length = 10644 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 cgtggccatggccgccggcgcc 200 |||||||||||||||||||||| Sbjct: 7634 cgtggccatggccgccggcgcc 7655
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 tgggtgccaacggcggcgtgct 262 |||||||||||||||||||||| Sbjct: 1090565 tgggtgccaacggcggcgtgct 1090586
>dbj|AK179003.1| Mus musculus cDNA, clone:Y0G0108L13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000034311, based on BLAT search Length = 67 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcagga 135 |||||||||||||||||||||| Sbjct: 1 cgcagcagcagaagcagcagga 22
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 cgtcccttccttcgccgccgcc 104 |||||||||||||||||||||| Sbjct: 1160557 cgtcccttccttcgccgccgcc 1160578
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194815 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 19476 cagaagcagcaggatggttgtg 19455
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 295 ccggcgagaccatcaccttcaa 316 |||||||||||||||||||||| Sbjct: 478061 ccggcgagaccatcaccttcaa 478082
>gb|AE003435.3| Drosophila melanogaster chromosome X, section 19 of 74 of the complete sequence Length = 290042 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 617 ttttctactctactctactcta 638 |||||||||||||||||||||| Sbjct: 5079 ttttctactctactctactcta 5058
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 192 gccggcgccatgctgctgggcg 213 |||||||||||||||||||||| Sbjct: 4922474 gccggcgccatgctgctgggcg 4922453
>emb|BX161494.1|CNSLT1I7P human full-length cDNA clone CS0DJ012YD11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 2002 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1538 cagaagcagcaggatggttgtg 1517
>gb|U94831.1|HSU94831 Homo sapiens multispanning membrane protein mRNA, complete cds Length = 2114 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgtg 143 |||||||||||||||||||||| Sbjct: 1263 cagaagcagcaggatggttgtg 1242
>gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE) gene, complete cds Length = 3380 Score = 44.1 bits (22), Expect = 0.57 Identities = 64/78 (82%) Strand = Plus / Plus Query: 405 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 464 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 2589 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 2648 Query: 465 ttctactgcgagccccac 482 | |||||||||||||||| Sbjct: 2649 tactactgcgagccccac 2666
>dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin precursor, complete cds Length = 816 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 ccccggcacctacggcttctactgcgagcc 478 |||||||||||||| |||||||||||||| Sbjct: 504 ccccggcacctacgagttctactgcgagcc 533
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctata 640 ||||||||||||||||||||| Sbjct: 10739 tctactctactctactctata 10719
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 81036 ttctactctactctactctat 81016 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 81111 ttctactctactctactcta 81092 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 81060 tctactctactctactctat 81041
>gb|AC150415.3| Branchiostoma floridae clone CH302-62D14, complete sequence Length = 147823 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 tttctactctactctactcta 638 ||||||||||||||||||||| Sbjct: 9733 tttctactctactctactcta 9753
>gb|AF101236.1| Naja sputatrix neutral phospholipase A2 (NPLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctata 640 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 5229 ttctactctactctactcta 5210 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 5218 tctactctactctactctat 5199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 5193 ttctactctactctactcta 5174
>gb|AF101235.1| Naja sputatrix acidic phospholipase A2 (APLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctata 640 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 5229 ttctactctactctactcta 5210 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 5218 tctactctactctactctat 5199 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 5193 ttctactctactctactcta 5174
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 cgcggccgtggccatggccgc 193 ||||||||||||||||||||| Sbjct: 1916416 cgcggccgtggccatggccgc 1916436 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 cggcggcgtgctggtgttcg 270 |||||||||||||||||||| Sbjct: 1997585 cggcggcgtgctggtgttcg 1997604
>gb|AC150492.2| Bos taurus BAC CH240-454H24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 185197 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatggt 139 |||||||||| |||||||||||||| Sbjct: 127287 gcagcagcagcagcagcaggatggt 127263
>ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07414.4) partial mRNA Length = 2712 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 gcggccgtggccatggccgcc 194 ||||||||||||||||||||| Sbjct: 2525 gcggccgtggccatggccgcc 2505
>ref|XM_588051.2| PREDICTED: Bos taurus similar to NPC1 (Niemann-Pick disease, type C1, gene)-like 1 (LOC539550), mRNA Length = 4002 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 3828 gcagcagcagaagcagcagga 3848
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 116498 gcagcagcagaagcagcagga 116478
>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence Length = 46427 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 2437 gcagcagcagaagcagcagga 2417
>ref|XR_002749.1| PREDICTED: Mus musculus similar to THO complex subunit 4 (Tho4) (RNA and export factor binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) (LOC670007), mRNA Length = 2938 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 2398 gcagcagcagaagcagcagga 2418 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 2155 gcagcagcagaagcagcagga 2175
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence Length = 186047 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 15 aggctagctctcctcctctgc 35 ||||||||||||||||||||| Sbjct: 148698 aggctagctctcctcctctgc 148678
>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence Length = 190880 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 10295 gcagcagcagaagcagcagga 10275
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 23610 ttctactctactctactctat 23590
>emb|CR722792.2|CNS0GKNI Tetraodon nigroviridis full-length cDNA Length = 1143 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 741 gcagcagcagaagcagcagga 761
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 agaccatcaccttcaagaaca 321 ||||||||||||||||||||| Sbjct: 1887121 agaccatcaccttcaagaaca 1887141 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gaaggccgccagcgcggccg 180 |||||||||||||||||||| Sbjct: 4793247 gaaggccgccagcgcggccg 4793228
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 atatgtatgtatatgttttct 622 ||||||||||||||||||||| Sbjct: 54158 atatgtatgtatatgttttct 54178
>emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chromosome 10 Contains two novel genes, complete sequence Length = 134826 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 116585 gcagcagcagaagcagcagga 116605
>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88017 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgttttc 621 ||||||||||||||||||||| Sbjct: 15105 tatatgtatgtatatgttttc 15125
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 cggcgagaccatcaccttcaagaac 320 |||| |||||||||||||||||||| Sbjct: 246840 cggcaagaccatcaccttcaagaac 246816
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 tggtgttcgacgaggacgccg 363 ||||||||||||||||||||| Sbjct: 9760 tggtgttcgacgaggacgccg 9780
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192275 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 13606 gcagcagcagaagcagcagga 13626 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 13363 gcagcagcagaagcagcagga 13383
>dbj|AK074734.1| Homo sapiens cDNA FLJ90253 fis, clone NT2RM4000284, highly similar to Human IgG Fc receptor hFcRn mRNA Length = 2674 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 cgcagcagcagaagcagcaggatgg 138 ||||||||||| ||||||||||||| Sbjct: 1854 cgcagcagcagcagcagcaggatgg 1830
>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513 Length = 679 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 ccaacgacttcagcgtcaaggccgg 298 |||||||||||| |||||||||||| Sbjct: 209 ccaacgacttcaccgtcaaggccgg 233
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 274 ccaacgacttcagcgtcaaggccgg 298 |||||||||||| |||||||||||| Sbjct: 1916264 ccaacgacttcaccgtcaaggccgg 1916240
>gb|AC010626.6| Homo sapiens chromosome 5 clone CTD-2138K21, complete sequence Length = 160312 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 cagcagcagaagcagcaggat 136 ||||||||||||||||||||| Sbjct: 5651 cagcagcagaagcagcaggat 5671
>gb|AC091990.2| Homo sapiens chromosome 5 clone RP11-82D20, complete sequence Length = 177470 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 cagcagcagaagcagcaggat 136 ||||||||||||||||||||| Sbjct: 47516 cagcagcagaagcagcaggat 47496
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgttttc 621 ||||||||||||||||||||| Sbjct: 80609 tatatgtatgtatatgttttc 80589
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 cgtcaaggccggcgagaccat 307 ||||||||||||||||||||| Sbjct: 1713828 cgtcaaggccggcgagaccat 1713808
>gb|AC012629.9| Homo sapiens chromosome 5 clone CTD-2154B17, complete sequence Length = 171603 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 cagcagcagaagcagcaggat 136 ||||||||||||||||||||| Sbjct: 12898 cagcagcagaagcagcaggat 12878
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 181 tggccatggccgccggcgccatgctgctgggcg 213 ||||| ||||||||| |||| |||||||||||| Sbjct: 1408585 tggccctggccgccgacgccgtgctgctgggcg 1408617
>gb|AC159909.8| Mus musculus 10 BAC RP23-312M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184546 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 101275 ttctactctactctactctat 101295 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 101295 ttctactctactctactcta 101314
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 56194 gcagcagcagaagcagcagga 56174
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ggccgtggccatggccgccggcgcc 200 |||||||||||||||||||| |||| Sbjct: 41984392 ggccgtggccatggccgccgccgcc 41984416
>gb|AY235187.1| Meleagris gallopavo clone MNT-222 microsatellite sequence Length = 741 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcaggatggt 139 |||||||||| |||||||||||||| Sbjct: 524 gcagcagcagcagcagcaggatggt 548
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ggccgtggccatggccgccggcgcc 200 |||||||||||||||||||| |||| Sbjct: 86469 ggccgtggccatggccgccgccgcc 86493
>ref|XM_574076.1| PREDICTED: Rattus norvegicus similar to urocortin III (LOC498791), mRNA Length = 720 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 265 gcagcagcagaagcagcagga 245
>ref|XM_573777.1| PREDICTED: Rattus norvegicus transmembrane 9 superfamily member 1 (predicted) (Tm9sf1_predicted), mRNA Length = 2465 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgt 142 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl aminopeptidase gene, partial cds; 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase gene, complete cds; and 2,5 dichloro-2,5 cyclohexadiene-1,4 diol dehydrogenase gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 357 gacgccgtgccctccggcgtcgacg 381 |||||||||||| |||||||||||| Sbjct: 182 gacgccgtgcccgccggcgtcgacg 158
>ref|XM_308922.2| Anopheles gambiae str. PEST ENSANGP00000012810 (ENSANGG00000010321), partial mRNA Length = 2103 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 1152 gcagcagcagaagcagcagga 1172
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 19418 ttctactctactctactctat 19438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 19438 ttctactctactctactcta 19457
>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the complete sequence Length = 307324 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 214138 gcagcagcagaagcagcagga 214118
>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2, complete sequence Length = 70979 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 60677 ttctactctactctactctat 60697
>gb|BC081891.1| Rattus norvegicus transmembrane 9 superfamily member 1, mRNA (cDNA clone MGC:93788 IMAGE:7109579), complete cds Length = 2441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgt 142 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>ref|NM_001012155.1| Rattus norvegicus transmembrane 9 superfamily member 1 (Tm9sf1), mRNA Length = 2441 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cagaagcagcaggatggttgt 142 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 53788 gcagcagcagaagcagcagga 53768
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 306 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 358 ||||| ||||||||||| || || | ||| |||||||| || ||||||||||| Sbjct: 47310 atcacgttcaagaacaatgctggtttccctcacaacgttgtcttcgacgagga 47362
>gb|AC115939.8| Mus musculus chromosome 3, clone RP24-549I13, complete sequence Length = 178373 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactctat 639 ||||||||||||||||||||| Sbjct: 172943 ttctactctactctactctat 172923
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 85822 gcagcagcagaagcagcagga 85802 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagga 135 ||||||||||||||||||||| Sbjct: 85579 gcagcagcagaagcagcagga 85559
>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence Length = 181148 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 catgcgcagcagcagaagcagcag 133 ||||||||||||||| |||||||| Sbjct: 70230 catgcgcagcagcagcagcagcag 70253
>gb|AC099884.12| Mus musculus chromosome 15, clone RP23-11F24, complete sequence Length = 265797 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 594 tgtacgctatatgtatgtatatgt 617 |||||| ||||||||||||||||| Sbjct: 81926 tgtacgatatatgtatgtatatgt 81949
>gb|AC123743.11| Mus musculus chromosome 5, clone RP24-116M4, complete sequence Length = 177350 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 19643 tctactctactctactctat 19624
>ref|XM_512289.1| PREDICTED: Pan troglodytes similar to semaphorin 6B isoform 1 precursor; semaphorin Z; semaphorin VIB (LOC455607), mRNA Length = 2444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 586 gcagcagcagaagcagcagg 567
>ref|XM_483748.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1139 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 ggccatggccgccggcgcca 201 |||||||||||||||||||| Sbjct: 118 ggccatggccgccggcgcca 99
>ref|XM_467761.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1221 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tccgtcccttccttcgccgccgcc 104 |||| ||||||||||||||||||| Sbjct: 167 tccgccccttccttcgccgccgcc 144
>ref|XM_469441.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2195 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 281 gcagcagcagaagcagcagg 300
>ref|XM_479160.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1666 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 166 gcagcagcagaagcagcagg 185
>ref|NM_032108.2| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.3, mRNA Length = 3805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>ref|NM_020241.2| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.1, mRNA Length = 2005 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>ref|NM_133327.1| Homo sapiens sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B (SEMA6B), transcript variant SEMA6B.2, mRNA Length = 2500 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 93 gcagcagcagaagcagcagg 74
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 30296 cgcagcagcagaagcagcag 30315
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 catgcgcagcagcagaagcagcag 133 ||||||||||||||| |||||||| Sbjct: 1722322 catgcgcagcagcagcagcagcag 1722345
>gb|AE017348.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 8, complete sequence Length = 1194300 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caacggcggcgtgctggtgt 267 |||||||||||||||||||| Sbjct: 1000597 caacggcggcgtgctggtgt 1000616
>gb|AY548484.1| Frog virus 3, complete genome Length = 105903 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gccatggccgccctctcctc 70 |||||||||||||||||||| Sbjct: 48564 gccatggccgccctctcctc 48545
>gb|AC005179.1| Homo sapiens chromosome 5, P1 clone 1041F10 (LBNL H88), complete sequence Length = 59765 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 atgtatgtatatgttttcta 623 |||||||||||||||||||| Sbjct: 37299 atgtatgtatatgttttcta 37318
>gb|AC007893.8| Drosophila melanogaster clone BACR02E15, complete sequence Length = 182430 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 atgcgcagcagcagaagcagcagg 134 ||||||| |||||||||||||||| Sbjct: 100614 atgcgcaacagcagaagcagcagg 100637
>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence Length = 170718 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 112470 cgcagcagcagaagcagcag 112451
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gttcgacgaggacgccgtgccctc 370 |||| ||||||||||||||||||| Sbjct: 4219622 gttcaacgaggacgccgtgccctc 4219645 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gccgtggccatggccgccgg 196 |||||||||||||||||||| Sbjct: 638240 gccgtggccatggccgccgg 638221
>ref|XM_414139.1| PREDICTED: Gallus gallus similar to MGC64570 protein (LOC415777), partial mRNA Length = 3916 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 1371 gcagcagcagaagcagcagg 1390
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 cgcggccgtggccatggccgccggcgcc 200 |||||||| |||||||||||||| |||| Sbjct: 67609 cgcggccgcggccatggccgccgccgcc 67582
>gb|BC059162.1| Rattus norvegicus Unknown (protein for MGC:72996), mRNA (cDNA clone MGC:72996 IMAGE:6888425), complete cds Length = 1290 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 679 gcagcagcagaagcagcagg 660
>gb|BC019547.1| Mus musculus RIKEN cDNA 2010004O20 gene, mRNA (cDNA clone MGC:28484 IMAGE:4164765), complete cds Length = 1276 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 698 gcagcagcagaagcagcagg 679
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 137767 tctactctactctactctat 137748
>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 59328 tctactctactctactctat 59347
>gb|AY050669.2| Drosophila melanogaster PKC-potentiated PP1 inhibitory protein mRNA, complete cds Length = 2344 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 228 cgcagcagcagaagcagcag 247
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 27971244 gcagcagcagaagcagcagg 27971225 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcaggatgg 138 ||||||||||||||||||| |||| Sbjct: 19055556 gcagcagcagaagcagcagaatgg 19055579
>gb|BC026747.1| Mus musculus LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), mRNA (cDNA clone MGC:25600 IMAGE:4024321), complete cds Length = 943 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 482 cgcagcagcagaagcagcag 501
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatgg 138 ||||||||||||||||||| |||| Sbjct: 102021 gcagcagcagaagcagcagaatgg 101998
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 53782 gcagcagcagaagcagcagg 53801
>gb|AC147876.1| Homo sapiens BAC clone RP11-718M20 from 4, complete sequence Length = 119938 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 23507 ttctactctactctactcta 23526
>ref|XM_980131.1| PREDICTED: Mus musculus hypothetical protein LOC670239 (LOC670239), mRNA Length = 789 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 472 gcagcagcagaagcagcagg 453 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 442 gcagcagcagaagcagcagg 423 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 283 gcagcagcagaagcagcagg 264
>ref|XM_990592.1| PREDICTED: Mus musculus hypothetical protein LOC676508 (LOC676508), mRNA Length = 789 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 472 gcagcagcagaagcagcagg 453 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 442 gcagcagcagaagcagcagg 423 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 283 gcagcagcagaagcagcagg 264
>ref|XM_001002299.1| PREDICTED: Mus musculus hypothetical protein LOC668564 (LOC668564), mRNA Length = 780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 463 gcagcagcagaagcagcagg 444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 433 gcagcagcagaagcagcagg 414 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 274 gcagcagcagaagcagcagg 255
>gb|AY491539.1| Nicotiana tabacum voucher Et4-10 ERT10 (ERT10) mRNA, partial cds Length = 457 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 312 ttcaagaacaacgccgggtacccgcacaacgt 343 ||||||||||| ||||||| ||| |||||||| Sbjct: 246 ttcaagaacaatgccgggttcccccacaacgt 277
>gb|AC139350.3| Mus musculus BAC clone RP24-254D18 from chromosome 15, complete sequence Length = 161300 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 40812 tatatgtatgtatatgtttt 40793
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ccaagatctcccaggaggag 404 |||||||||||||||||||| Sbjct: 74211 ccaagatctcccaggaggag 74230
>ref|XM_838442.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1359) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 catgcgcagcagcagaagcagcag 133 ||||||||||||||| |||||||| Sbjct: 100 catgcgcagcagcagcagcagcag 123
>ref|XM_855865.1| PREDICTED: Canis familiaris hypothetical protein LOC608180 (LOC608180), mRNA Length = 1041 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ccttccttcgccgccgccac 106 |||||||||||||||||||| Sbjct: 662 ccttccttcgccgccgccac 681
>emb|CT025613.9| Mouse DNA sequence from clone RP23-208M16 on chromosome 13, complete sequence Length = 166222 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 23419 ttctactctactctactcta 23400 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 23358 tctactctactctactctat 23339
>emb|Z99292.1|SPAC17A2 S.pombe chromosome I cosmid c17A2 Length = 36642 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 27445 tctactctactctactctat 27464
>ref|XM_960955.1| Plasmodium falciparum 3D7 DNA repair protein (rad50) partial mRNA Length = 6711 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 3409 tatatgtatgtatatgtttt 3390
>ref|XM_572256.1| Cryptococcus neoformans var. neoformans JEC21 Rab guanyl-nucleotide exchange factor (CNH00630) partial mRNA Length = 3246 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 caacggcggcgtgctggtgt 267 |||||||||||||||||||| Sbjct: 111 caacggcggcgtgctggtgt 130
>gb|AC127412.4| Mus musculus BAC clone RP23-234O14 from chromosome 16, complete sequence Length = 225685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 132159 tctactctactctactctat 132178
>ref|XM_807410.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510283.80) partial mRNA Length = 1101 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 969 gcagcagcagaagcagcagg 988
>gb|BC020421.1| Homo sapiens Fc fragment of IgG, receptor, transporter, alpha, mRNA (cDNA clone IMAGE:2900361) Length = 1852 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 1659 gcagcagcagcagcagcaggatgg 1636
>ref|XM_810126.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053503823.50) partial mRNA Length = 1098 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 966 gcagcagcagaagcagcagg 985
>gb|AC015909.14| Homo sapiens chromosome 17, clone RP11-893F2, complete sequence Length = 217746 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 4597 gcagcagcagcagcagcaggatgg 4620
>gb|AY150217.1| Ambystoma tigrinum stebbensi virus, complete genome Length = 106332 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gccatggccgccctctcctc 70 |||||||||||||||||||| Sbjct: 79984 gccatggccgccctctcctc 79965
>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence Length = 199993 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 catgcgcagcagcagaagcagcag 133 |||| ||||||||||||||||||| Sbjct: 2563 catgagcagcagcagaagcagcag 2540
>gb|AC108409.8| Mus musculus chromosome 19, clone RP23-84G7, complete sequence Length = 270854 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 237396 ttctactctactctactcta 237377 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 237385 tctactctactctactctat 237366
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 97019 tatatgtatgtatatgtttt 97038
>gb|AC160629.6| Medicago truncatula clone mth2-24p23, complete sequence Length = 64145 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 14997 tatatgtatgtatatgtttt 15016
>emb|CR339051.6| Zebrafish DNA sequence from clone DKEY-223N8 in linkage group 7, complete sequence Length = 176851 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 5751 ttctactctactctactcta 5770
>gb|AC147365.4| Medicago truncatula clone mth2-10f9, complete sequence Length = 89850 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 64661 tatatgtatgtatatgtttt 64642
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 257910 cgcagcagcagaagcagcag 257929
>emb|Z99291.1|HS308I13 Human DNA sequence from clone RP1-308I13 on chromosome 1p35-36.3 Contains part of a novel gene, complete sequence Length = 96608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 atgcatcatattgattaatt 594 |||||||||||||||||||| Sbjct: 33691 atgcatcatattgattaatt 33672
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 cctgggcaagaaggccgcca 171 |||||||||||||||||||| Sbjct: 4712080 cctgggcaagaaggccgcca 4712099
>emb|AL445204.3| Human DNA sequence from clone RP11-232K22 on chromosome 13 Contains the 3' end of a novel gene, complete sequence Length = 129923 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 5678 tctactctactctactctat 5659
>emb|AL355512.22| Human DNA sequence from clone RP11-525A16 on chromosome 10 Contains the DUSP5 gene for dual specificity phosphatase 5 (HVH3), two novel genes, a high-mobility group box 3 (HMGB3) pseudogene and a CpG island, complete sequence Length = 199785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 tatgtatgtatatgttttct 622 |||||||||||||||||||| Sbjct: 154770 tatgtatgtatatgttttct 154751
>emb|AL354869.11| Human DNA sequence from clone RP11-600P1 on chromosome 13 Contains a heat shock 60kDa protein 1 (chaperonin) (HSPD1) pseudogene, a novel gene and a ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 197634 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 agcagcagaagcagcaggat 136 |||||||||||||||||||| Sbjct: 110035 agcagcagaagcagcaggat 110016
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 caaggccggcgagaccatca 309 |||||||||||||||||||| Sbjct: 2396512 caaggccggcgagaccatca 2396531
>emb|AL157780.12| Human DNA sequence from clone RP11-98E22 on chromosome 9q33.1-33.3 Contains a CpG island, complete sequence Length = 160114 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 156120 tctactctactctactctat 156139 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 156050 tctactctactctactctat 156069 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 156044 ttctactctactctactcta 156063
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 38497 tctactctactctactctat 38516
>ref|XM_961473.1| PREDICTED: Tribolium castaneum similar to nuclear oncoprotein skia (LOC655004), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 tcccttccttcgccgccgcc 104 |||||||||||||||||||| Sbjct: 1337 tcccttccttcgccgccgcc 1356
>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189219 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 87652 tatatgtatgtatatgtttt 87671
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 catcaccttcaagaacaacgccgg 328 |||||||||||| ||||||||||| Sbjct: 1002222 catcaccttcaacaacaacgccgg 1002199
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 241110 tatatgtatgtatatgtttt 241129
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 590 taattgtacgctatatgtatgtatatgt 617 |||||||| | ||||||||||||||||| Sbjct: 13474 taattgtatgttatatgtatgtatatgt 13447
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gttcgacgaggacgccgtgccctc 370 |||| ||||||||||||||||||| Sbjct: 60577 gttcaacgaggacgccgtgccctc 60600
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gccgtggccatggccgccgg 196 |||||||||||||||||||| Sbjct: 294881 gccgtggccatggccgccgg 294862
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcggccgtggccatggccgc 193 |||||||||||||||||||| Sbjct: 382 gcggccgtggccatggccgc 363
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 agaaggccgccagcgcggcc 179 |||||||||||||||||||| Sbjct: 233726 agaaggccgccagcgcggcc 233707
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gcggccgtggccatggccgc 193 |||||||||||||||||||| Sbjct: 293652 gcggccgtggccatggccgc 293633 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 agaaggccgccagcgcggcc 179 |||||||||||||||||||| Sbjct: 177814 agaaggccgccagcgcggcc 177795
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 agaaggccgccagcgcggcc 179 |||||||||||||||||||| Sbjct: 236086 agaaggccgccagcgcggcc 236105
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gcggccgtggccatggccgc 193 |||||||||||||||||||| Sbjct: 76379 gcggccgtggccatggccgc 76398
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 451 ccggcacctacggcttctactgcgagccccac 482 ||||||||| || || |||||||||||||||| Sbjct: 59995 ccggcaccttcgactactactgcgagccccac 60026
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 gttcgacgaggacgccgtgccctc 370 |||| ||||||||||||||||||| Sbjct: 96604 gttcaacgaggacgccgtgccctc 96627
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gccgtggccatggccgccgg 196 |||||||||||||||||||| Sbjct: 295032 gccgtggccatggccgccgg 295013
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 ccgtcaccctcaccgtccccggca 456 |||||||| ||||||||||||||| Sbjct: 231553 ccgtcaccgtcaccgtccccggca 231576
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16, complete sequence Length = 155702 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 atgtatgtatatgttttcta 623 |||||||||||||||||||| Sbjct: 155318 atgtatgtatatgttttcta 155299
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 412 acgcccccggcgagaccttc 431 |||||||||||||||||||| Sbjct: 76965 acgcccccggcgagaccttc 76984
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cggcggcgtgctggtgttcg 270 |||||||||||||||||||| Sbjct: 23564 cggcggcgtgctggtgttcg 23545
>emb|AL844607.4| Mouse DNA sequence from clone RP24-280G18 on chromosome 4, complete sequence Length = 160298 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 accatcaccttcaagaacaa 322 |||||||||||||||||||| Sbjct: 5651 accatcaccttcaagaacaa 5632
>gb|AC151908.8| Mus musculus BAC clone RP23-109A22 from chromosome 8, complete sequence Length = 233606 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 100912 gcagcagcagaagcagcagg 100931
>ref|NM_198781.1| Rattus norvegicus Unknown (protein for MGC:72996) (MGC72996), mRNA Length = 1290 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 679 gcagcagcagaagcagcagg 660
>emb|AL844601.4| Mouse DNA sequence from clone RP23-245J22 on chromosome 4, complete sequence Length = 166294 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 12615 tctactctactctactctat 12596
>emb|CR456624.7| Zebrafish DNA sequence from clone CH211-69E5 in linkage group 13, complete sequence Length = 172195 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 cgctatatgtatgtatatgt 617 |||||||||||||||||||| Sbjct: 90542 cgctatatgtatgtatatgt 90561
>gb|AY603379.1| Mus musculus hepatocyte odd protein shuttling protein (Hops) mRNA, complete cds Length = 1110 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 673 gcagcagcagaagcagcagg 654
>gb|AY603378.1| Rattus norvegicus hepatocyte odd protein shuttling protein (Hops) mRNA, complete cds Length = 1381 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 791 gcagcagcagaagcagcagg 772
>gb|AC107909.5| Homo sapiens chromosome 8, clone CTD-2340D6, complete sequence Length = 149001 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 9980 ttctactctactctactcta 9961 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 9929 tctactctactctactctat 9910
>emb|BX470065.7| Zebrafish DNA sequence from clone DKEY-105H11 in linkage group 24, complete sequence Length = 198444 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 142819 tatatgtatgtatatgtttt 142838
>emb|BX465841.9| Zebrafish DNA sequence from clone CH211-198K5 in linkage group 21, complete sequence Length = 83186 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 28723 ttctactctactctactcta 28704 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 28717 tctactctactctactctat 28698 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 28656 ttctactctactctactcta 28637 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 28645 tctactctactctactctat 28626 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 28584 ttctactctactctactcta 28565 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 28573 tctactctactctactctat 28554
>gb|AC104986.5| Homo sapiens chromosome 8, clone RP11-410L14, complete sequence Length = 153411 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 22913 tctactctactctactctat 22932
>gb|DQ450368.1| Uncultured bacterium clone X16 16S ribosomal RNA gene, partial sequence Length = 361 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ggtgttcgacgaggacgccg 363 |||||||||||||||||||| Sbjct: 67 ggtgttcgacgaggacgccg 86
>gb|DQ167730.1| Drosophila simulans putative Cyp28c1 protein (Cyp28c1) gene, exons 1 through 5 and partial cds Length = 1580 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 164 ggccgccagcgcggccgtggccatggcc 191 ||||||||| |||||| ||||||||||| Sbjct: 1562 ggccgccagtgcggccttggccatggcc 1535
>gb|AC026339.23| Homo sapiens 12 BAC RP11-109A15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 55087 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 38098 ttctactctactctactcta 38079 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 38057 tctactctactctactctat 38038
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gaaggccgccagcgcggccg 180 |||||||||||||||||||| Sbjct: 5339692 gaaggccgccagcgcggccg 5339673 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 cggcgagaccatcaccttcaagaa 319 |||| ||||||||||||||||||| Sbjct: 1631008 cggcaagaccatcaccttcaagaa 1631031
>emb|CR614236.1| full-length cDNA clone CL0BB004ZB08 of Neuroblastoma of Homo sapiens (human) Length = 1888 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 1693 gcagcagcagcagcagcaggatgg 1670
>dbj|AK075510.1| Homo sapiens cDNA PSEC0208 fis, clone HEMBA1003252, highly similar to IGG RECEPTOR FCRN LARGE SUBUNIT P51 PRECURSOR Length = 1730 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 1033 gcagcagcagcagcagcaggatgg 1010
>tpg|BK003116.1| TPA: TPA_inf: Drosophila melanogaster HDC18498 (HDC18498) gene, partial cds Length = 1319 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 catgcgcagcagcagaagcagcag 133 ||||||||||||||| |||||||| Sbjct: 599 catgcgcagcagcagcagcagcag 622
>gb|AC010619.7| Homo sapiens chromosome 19 clone CTD-3148I10, complete sequence Length = 179394 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 112239 gcagcagcagcagcagcaggatgg 112216
>dbj|AK055164.1| Homo sapiens cDNA FLJ30602 fis, clone BRAWH2009558 Length = 2268 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcaggatgg 138 |||||||||| ||||||||||||| Sbjct: 265 gcagcagcagcagcagcaggatgg 288
>ref|NM_164942.1| Drosophila melanogaster CG17124-RB, transcript variant B (CG17124), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>ref|NM_144114.3| Drosophila melanogaster CG14494-RA (CG14494), mRNA Length = 516 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 443 cgcagcagcagaagcagcag 462
>ref|NM_143485.2| Drosophila melanogaster CG7814-RA (CG7814), mRNA Length = 3085 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 atgcgcagcagcagaagcagcagg 134 ||||||| |||||||||||||||| Sbjct: 56 atgcgcaacagcagaagcagcagg 79
>ref|NM_135606.2| Drosophila melanogaster CG17124-RA, transcript variant A (CG17124), mRNA Length = 1242 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>gb|AY095067.1| Drosophila melanogaster RE14405 full insert cDNA Length = 1258 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 227 cgcagcagcagaagcagcag 246
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cggcggcgtgctggtgttcg 270 |||||||||||||||||||| Sbjct: 48670 cggcggcgtgctggtgttcg 48651
>gb|AC097513.2| Homo sapiens BAC clone RP11-419E3 from 4, complete sequence Length = 151389 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 atatgtatgtatatgttttc 621 |||||||||||||||||||| Sbjct: 75049 atatgtatgtatatgttttc 75068
>dbj|AK143470.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched library, clone:E860006K03 product:LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 759 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 323 cgcagcagcagaagcagcag 342
>dbj|AK167784.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730024C18 product:LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae), full insert sequence Length = 799 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 363 cgcagcagcagaagcagcag 382
>gb|AC182460.2| Gallus gallus BAC clone CH261-132N3 from chromosome ul, complete sequence Length = 212965 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 159833 tctactctactctactctat 159814
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 63796 gcagcagcagaagcagcagg 63815
>gb|AC099023.1| Drosophila melanogaster, chromosome 2R, region 56X-57A, BAC clone BACR48L22, complete sequence Length = 180814 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 155911 gcagcagcagaagcagcagg 155892
>gb|AC099012.1| Drosophila melanogaster, chromosome 2R, region 56F-57X, BAC clone BACR23F24, complete sequence Length = 183592 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 110180 gcagcagcagaagcagcagg 110199
>gb|AC009309.4| Homo sapiens BAC clone RP11-301O19 from 2, complete sequence Length = 170720 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 162484 tctactctactctactctat 162465
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gcgccatgctgctgggcggg 215 |||||||||||||||||||| Sbjct: 3039756 gcgccatgctgctgggcggg 3039775
>gb|AC177806.2| Gallus gallus BAC clone CH261-13L12 from chromosome ul, complete sequence Length = 250495 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 89054 tctactctactctactctat 89035
>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence Length = 273403 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 190056 gcagcagcagaagcagcagg 190075
>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 38955 ttctactctactctactcta 38936 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 38904 tctactctactctactctat 38885
>emb|BX936465.15| Zebrafish DNA sequence from clone CH211-95J16 in linkage group 18, complete sequence Length = 116706 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 tatatgtatgtatatgtttt 620 |||||||||||||||||||| Sbjct: 4677 tatatgtatgtatatgtttt 4696
>dbj|AK003847.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110020C01 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 773 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 335 cgcagcagcagaagcagcag 354
>dbj|AK010910.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510005B08 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 335 cgcagcagcagaagcagcag 354
>gb|AY051546.1| Drosophila melanogaster GH19431 full length cDNA Length = 3095 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 atgcgcagcagcagaagcagcagg 134 ||||||| |||||||||||||||| Sbjct: 56 atgcgcaacagcagaagcagcagg 79
>dbj|AK089028.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430036L24 product:U6 snRNA-associated SM-like protein 4, full insert sequence Length = 786 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 352 cgcagcagcagaagcagcag 371
>gb|AC124805.3| Branchiostoma floridae, clone -25B24, complete sequence Length = 67731 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 41208 tctactctactctactctat 41227
>gb|AC160392.2| Mus musculus BAC clone RP23-240E9 from chromosome 9, complete sequence Length = 199695 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 69008 ttctactctactctactcta 68989
>dbj|AK036340.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630059E20 product:unclassifiable, full insert sequence Length = 4703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 2984 ttctactctactctactcta 2965
>gb|AC009110.10| Homo sapiens chromosome 16 clone RP11-467O15, complete sequence Length = 188763 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 tctactctactctactctat 639 |||||||||||||||||||| Sbjct: 95794 tctactctactctactctat 95813
>gb|AC007351.40|AC007351 Homo sapiens 12 BAC RP11-492N15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195501 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 619 ttctactctactctactcta 638 |||||||||||||||||||| Sbjct: 101952 ttctactctactctactcta 101933
>gb|AC092221.1|AC092221 Drosophila melanogaster, chromosome 2L, region 22A-22C, BAC clone BACR16D07, complete sequence Length = 170868 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 141406 cgcagcagcagaagcagcag 141425
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 agaccatcaccttcaagaac 320 |||||||||||||||||||| Sbjct: 4353267 agaccatcaccttcaagaac 4353248
>dbj|AK008109.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010004O20 product:hypothetical Ubiquitin domain containing protein, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcagcagcagaagcagcagg 134 |||||||||||||||||||| Sbjct: 676 gcagcagcagaagcagcagg 657
>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR28G24, complete sequence Length = 171375 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 atatgtatgtatatgttttc 621 |||||||||||||||||||| Sbjct: 57060 atatgtatgtatatgttttc 57041
>gb|AY029323.1| Regina ranavirus clone PstI-4.9A orf2-like protein gene, complete cds Length = 4911 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 gccatggccgccctctcctc 70 |||||||||||||||||||| Sbjct: 2423 gccatggccgccctctcctc 2404
>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR13N02, complete sequence Length = 172479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 35800 cgcagcagcagaagcagcag 35781
>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone BACR04D05, complete sequence Length = 154730 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cgcagcagcagaagcagcag 133 |||||||||||||||||||| Sbjct: 113321 cgcagcagcagaagcagcag 113302
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 atgtatgtatatgttttcta 623 |||||||||||||||||||| Sbjct: 5454669 atgtatgtatatgttttcta 5454650
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 cgcggccgtggccatggccgccggcgcc 200 |||||||| |||||||||||||| |||| Sbjct: 21862175 cgcggccgcggccatggccgccgccgcc 21862148
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 ggccatggccgccggcgcca 201 |||||||||||||||||||| Sbjct: 27885679 ggccatggccgccggcgcca 27885698 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,691,318 Number of Sequences: 3902068 Number of extensions: 5691318 Number of successful extensions: 187965 Number of sequences better than 10.0: 342 Number of HSP's better than 10.0 without gapping: 347 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 181599 Number of HSP's gapped (non-prelim): 6314 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
