>emb|X66874.1|PV70HSP P.vulgaris mRNA for 70 kD heat shock protein
          Length = 2405

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 25   cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtga 78
            |||||||| ||||||||||| |||||||| || || |||||||| |||||||||
Sbjct: 2105 cagggtggtggtgaccaggctccagaggcagaatatgaggaggtcaagaagtga 2158

>gb|AY104983.1| Zea mays PCO092463 mRNA sequence
          Length = 2588

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 25   cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtga 78
            ||||||||||| |||||||| || ||||| ||||| |||||||| |||||||||
Sbjct: 2115 cagggtggcggcgaccaggcgccggaggcagagtatgaggaggttaagaagtga 2168

>ref|XM_468043.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2332

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
            |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 2063 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 2122

                 
Query: 75   gtgaa 79
            |||||
Sbjct: 2123 gtgaa 2127

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 15       aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
                |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 32707534 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 32707475

                     
Query: 75       gtgaa 79
                |||||
Sbjct: 32707474 gtgaa 32707470

>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1448_G06
          Length = 136823

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 15    aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
             |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 35769 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 35710

                  
Query: 75    gtgaa 79
             |||||
Sbjct: 35709 gtgaa 35705

>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1611_C08
          Length = 135386

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 15     aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
              |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 134905 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 134846

                   
Query: 75     gtgaa 79
              |||||
Sbjct: 134845 gtgaa 134841

>dbj|AK065228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H04, full
            insert sequence
          Length = 2397

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
            |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 2063 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 2122

                 
Query: 75   gtgaa 79
            |||||
Sbjct: 2123 gtgaa 2127

>dbj|AK060740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D07, full
            insert sequence
          Length = 1675

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 15   aggagggtcgcagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaa 74
            |||||| || ||||| || || || ||||| |||||||| |||||||||||||| |||||
Sbjct: 1383 aggaggatctcagggcggaggcgagcaggctccagaggctgagtacgaggaggtcaagaa 1442

                 
Query: 75   gtgaa 79
            |||||
Sbjct: 1443 gtgaa 1447

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 25     cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtgaa 79
              ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 745489 cagggcggaggtgaccaggctcctgaggctgagtatgaggaggtcaagaagtgaa 745435

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 25     cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtgaa 79
              ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 745487 cagggcggaggtgaccaggctcctgaggctgagtatgaggaggtcaagaagtgaa 745433

>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 25    cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtgaa 79
             ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 41034 cagggcggaggtgaccaggctcctgaggctgagtatgaggaggtcaagaagtgaa 40980

>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16,
              complete sequence
          Length = 160053

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 25     cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtgaa 79
              ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 131370 cagggcggaggtgaccaggctcctgaggctgagtatgaggaggtcaagaagtgaa 131316

>dbj|AK103835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148E17, full
            insert sequence
          Length = 2485

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 25   cagggtggcggtgaccaggccccagaggccgagtacgaggaggtgaagaagtgaa 79
            ||||| || ||||||||||| || ||||| ||||| |||||||| ||||||||||
Sbjct: 2103 cagggcggaggtgaccaggctcctgaggctgagtatgaggaggtcaagaagtgaa 2157

>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 46.1 bits (23), Expect = 0.064
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 23     cgcagggtggcggtgaccaggcc 45
              |||||||||||||||||||||||
Sbjct: 238325 cgcagggtggcggtgaccaggcc 238303

>emb|AL589733.20| Human DNA sequence from clone RP11-164L23 on chromosome 6 Contains the
             5' end of a novel gene, the gene for HGC6.1.1 protein, the
             KNSL3 gene for kinesin-like 3, the gene for a novel
             protein and 5 CpG islands, complete sequence
          Length = 201088

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 88    cccagcccagccccaccttct 108
             |||||||||||||||||||||
Sbjct: 85482 cccagcccagccccaccttct 85502

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 84      ctgccccagcccagccccacc 104
               |||||||||||||||||||||
Sbjct: 2848447 ctgccccagcccagccccacc 2848467

>emb|AL021811.1|ATF10M6 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M6 (ESSAII project)
          Length = 93353

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 46    ccagaggccgagtacgaggaggtgaagaagtga 78
             |||||||| ||||||||||| ||||| ||||||
Sbjct: 66873 ccagaggcagagtacgaggaagtgaaaaagtga 66905

>emb|AL161580.2|ATCHRIV76 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 76
          Length = 165698

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 46     ccagaggccgagtacgaggaggtgaagaagtga 78
              |||||||| ||||||||||| ||||| ||||||
Sbjct: 133490 ccagaggcagagtacgaggaagtgaaaaagtga 133458

>ref|XM_323944.1| Neurospora crassa OR74A hypothetical protein (NCU04589.1) partial
            mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   accaggccccagaggccgag 57
            ||||||||||||||||||||
Sbjct: 1184 accaggccccagaggccgag 1165

>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete
             sequence
          Length = 213181

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    ccccagcccagccccacctt 106
             ||||||||||||||||||||
Sbjct: 44518 ccccagcccagccccacctt 44499

>ref|XM_953197.1| Neurospora crassa OR74A hypothetical protein (NCU04589.1) partial
            mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   accaggccccagaggccgag 57
            ||||||||||||||||||||
Sbjct: 1184 accaggccccagaggccgag 1165

>gb|AC115880.11| Mus musculus chromosome 9, clone RP24-365N15, complete sequence
          Length = 202851

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    cccagcccagccccaccttc 107
             ||||||||||||||||||||
Sbjct: 61446 cccagcccagccccaccttc 61427

>emb|Y15994.1|HSMTM1 Homo sapiens 47kB DNA fragment from Xq28, proximal to MTM1 gene
          Length = 47300

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    gccccagcccagccccacct 105
             ||||||||||||||||||||
Sbjct: 35160 gccccagcccagccccacct 35141

>ref|XM_389704.1| Gibberella zeae PH-1 chromosome 4 conserved hypothetical protein
            (FG09528.1) partial mRNA
          Length = 2253

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   aggccccagaggccgagtac 60
            ||||||||||||||||||||
Sbjct: 1520 aggccccagaggccgagtac 1539

>ref|XM_849105.1| PREDICTED: Canis familiaris hypothetical protein LOC611437
           (LOC611437), mRNA
          Length = 1126

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  ctgccccagcccagccccac 103
           ||||||||||||||||||||
Sbjct: 341 ctgccccagcccagccccac 360

>emb|AJ698040.1| Suillus bovinus tubb1 gene for beta-tubulin 1, exons 1-10
          Length = 2544

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   agaggccgagtacgaggagg 67
            ||||||||||||||||||||
Sbjct: 2195 agaggccgagtacgaggagg 2214

>emb|BX294012.1|NC80A10 Neurospora crassa DNA linkage group V Cosmid contig 80A10
          Length = 161126

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    accaggccccagaggccgag 57
             ||||||||||||||||||||
Sbjct: 90981 accaggccccagaggccgag 91000

>emb|AJ630366.1| Canis familiaris MHC class II region on chromosome CFA12, partial
             sequence, BAC clone 21p19, containing partial col11a2
             gene, RXRB, SLC39A7, HSD17B8, RING1, VPS52, RPS18 and
             B3GALT4 genes, C12H6orf11 ORF, KE2, RAB2L, TAPBP, ZNF297
             and DAXX genes
          Length = 143626

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    cccagcccagccccaccttc 107
             ||||||||||||||||||||
Sbjct: 83177 cccagcccagccccaccttc 83158

>gb|AC092980.5| Homo sapiens 3 BAC RP11-756L14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 136111

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   ttggctgtaataaaattttgctcc 178
             ||||||||||||||||| ||||||
Sbjct: 64534 ttggctgtaataaaattgtgctcc 64511

>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    gccccagcccagccccacct 105
             ||||||||||||||||||||
Sbjct: 85352 gccccagcccagccccacct 85371

>gb|AF020663.1|HSMTM01 Homo sapiens myotubularin (MTM1) gene, promoter and exon 1
          Length = 4273

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 86  gccccagcccagccccacct 105
           ||||||||||||||||||||
Sbjct: 914 gccccagcccagccccacct 895

>gb|AY112730.1| Suillus bovinus beta-tubulin mRNA, complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   agaggccgagtacgaggagg 67
            ||||||||||||||||||||
Sbjct: 1335 agaggccgagtacgaggagg 1354

>gb|AC148396.3| Medicago truncatula chromosome 2 BAC clone mth2-17k4, complete sequence
          Length = 108273

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 37    gaccaggccccagaggccgagtacgaggaggtgaagaagt 76
             |||||||| |||||||| || || || |||||||||||||
Sbjct: 38770 gaccaggctccagaggcagaatatgaagaggtgaagaagt 38809

>gb|AF049067.1|AF049067 Pinus radiata cytochrome P450 (PRE74) mRNA, complete cds
          Length = 1990

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 68  tgaagaagtgaagaagctgc 87
           ||||||||||||||||||||
Sbjct: 804 tgaagaagtgaagaagctgc 823

>gb|AC136957.1| Homo sapiens chromosome X clone RP11-477H13 map q28, complete sequence
          Length = 166719

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gccccagcccagccccacct 105
              ||||||||||||||||||||
Sbjct: 119267 gccccagcccagccccacct 119248

>gb|AC109994.2| Homo sapiens chromosome X clone CTD-2537J14 map q28, complete sequence
          Length = 198434

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gccccagcccagccccacct 105
              ||||||||||||||||||||
Sbjct: 123538 gccccagcccagccccacct 123519


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,866,810
Number of Sequences: 3902068
Number of extensions: 2866810
Number of successful extensions: 60394
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60272
Number of HSP's gapped (non-prelim): 122
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)