ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal3a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_470395.1| Oryza sativa (japonica cultivar-group), mRNA 480 e-132
2ref|XM_470394.1| Oryza sativa (japonica cultivar-group), mRNA 480 e-132
3dbj|AK100284.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
4gb|AY106668.1| Zea mays PCO087459 mRNA sequence 357 2e-95
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 6e-34
6gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 153 6e-34
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
8emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 i... 44 0.40
9gb|AF241734.2| Homo sapiens chromosome X clone RP1-34M10 map p11... 42 1.6
10gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11... 42 1.6
11gb|AC175363.2| Pan troglodytes chromosome X clone CH251-7A1 map ... 42 1.6
12emb|AL670662.7| Human DNA sequence from clone XXbac-93B10 on chr... 42 1.6
13gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, co... 40 6.3
14gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, com... 40 6.3
15gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, co... 40 6.3
16emb|Y15839.1|CHY15839 Cochliobolus heterostrophus pkc1, fat1 genes 40 6.3
17gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 40 6.3
18emb|CR859591.1| Pongo pygmaeus mRNA; cDNA DKFZp468N195 (from clo... 40 6.3
19gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, com... 40 6.3
20gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosom... 40 6.3
21gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, comp... 40 6.3
22gb|AF132039.1|AF132039 Mus musculus BAC 118I7 chromosome 6 Gpr37... 40 6.3
23gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 6.3
24gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome... 40 6.3
25gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Canc... 40 6.3

>ref|XM_470395.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score =  480 bits (242), Expect = e-132
 Identities = 408/463 (88%), Gaps = 2/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 64
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 450

                                                                       
Query: 65  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 124
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 451 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 510

                                                                       
Query: 125 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 184
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 511 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 570

                                                                       
Query: 185 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 243
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 571 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 629

                                                                       
Query: 244 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 303
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 630 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 689

                                                                       
Query: 304 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 363
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 690 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 749

                                                                       
Query: 364 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 423
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 750 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 809

                                                      
Query: 424 gtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
            ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 810 ctttatcaatcagacaattggaggaagatcctctactggagac 852



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>ref|XM_470394.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1472

 Score =  480 bits (242), Expect = e-132
 Identities = 408/463 (88%), Gaps = 2/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 64
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 330 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 389

                                                                       
Query: 65  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 124
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 390 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 449

                                                                       
Query: 125 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 184
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 450 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 509

                                                                       
Query: 185 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 243
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 510 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 568

                                                                       
Query: 244 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 303
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 569 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 628

                                                                       
Query: 304 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 363
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 629 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 688

                                                                       
Query: 364 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 423
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 689 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 748

                                                      
Query: 424 gtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
            ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 749 ctttatcaatcagacaattggaggaagatcctctactggagac 791



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>dbj|AK100284.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075D13, full
           insert sequence
          Length = 1659

 Score =  480 bits (242), Expect = e-132
 Identities = 408/463 (88%), Gaps = 2/463 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaaga 64
           ||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 391 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaaga 450

                                                                       
Query: 65  tcctaaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaa 124
            || |||||||||||||||||||||||||||||||| || ||||| ||  ||||||||||
Sbjct: 451 ccccaaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaa 510

                                                                       
Query: 125 ggtcgttgaagcgaatgaggcagnnnnnnngcttgtcttctctgagaaggatgccagttg 184
           ||| || |||| ||| |||| ||       |||||||||||| ||||||||||| |||||
Sbjct: 511 ggtggtcgaagtgaacgaggaagaaaggaagcttgtcttctcagagaaggatgcaagttg 570

                                                                       
Query: 185 gt-cattgtactcttctcaagtaaagattggtggtatctatgatggaattgttggttcag 243
           || || |  | ||||||| ||| |||||||||| |||||||||||||||||| |||||||
Sbjct: 571 gttcactc-attcttctctagtcaagattggtgctatctatgatggaattgtcggttcag 629

                                                                       
Query: 244 tgttccactatggtgcatttgttcacctgcaatttcctgatggaaattatcatctcactg 303
           | |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 630 ttttccactacggtgcatttgttcatctgcgatttcctgatggaaattatcatcttactg 689

                                                                       
Query: 304 gtctcgtacatatctctgaggtctcttgggatcttgtccaagatgtccaagattttctaa 363
           | || |||||||||||||||||||||||||||||||||||||||||||  |||||| |||
Sbjct: 690 gccttgtacatatctctgaggtctcttgggatcttgtccaagatgtccgggattttttaa 749

                                                                       
Query: 364 ccgaaggtgataccgtcaaggtcatagtggtgaatgttgatgcggagaaatcaaggatag 423
             ||||||||||| ||||||||||||||||||||  |||||  |||||| ||||||||||
Sbjct: 750 atgaaggtgatactgtcaaggtcatagtggtgaacattgatatggagaagtcaaggatag 809

                                                      
Query: 424 gtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
            ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 810 ctttatcaatcagacaattggaggaagatcctctactggagac 852



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>gb|AY106668.1| Zea mays PCO087459 mRNA sequence
          Length = 814

 Score =  357 bits (180), Expect = 2e-95
 Identities = 368/433 (84%)
 Strand = Plus / Plus

                                                                       
Query: 23  cgtgcccaaccctctcctcagccccgcgcattggtgtaaagatcctaaaaggcccattca 82
           |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||
Sbjct: 1   cgtgcccaaccctctcctcagccccgcgcactggtgtaaagaccccaaaaggcccatcca 60

                                                                       
Query: 83  agatgttacaaaggacctagtaggttcctctgtttctgtcaaggtcgttgaagcgaatga 142
           ||||||||| || |||||||||||  | ||  ||||||||||||| | ||||| ||||||
Sbjct: 61  agatgttacgaaagacctagtaggaacgtccatttctgtcaaggtggctgaagtgaatga 120

                                                                       
Query: 143 ggcagnnnnnnngcttgtcttctctgagaaggatgccagttggtcattgtactcttctca 202
           ||  |        ||||||||||||||||||||||| |||||||||   |||||||| | 
Sbjct: 121 ggaggaaaagaaacttgtcttctctgagaaggatgctagttggtcaacatactcttcccg 180

                                                                       
Query: 203 agtaaagattggtggtatctatgatggaattgttggttcagtgttccactatggtgcatt 262
           | |||||||||| |  ||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 181 aataaagattggcgacatctatgatggaattgtgggctcagtgttccactatggtgcatt 240

                                                                       
Query: 263 tgttcacctgcaatttcctgatggaaattatcatctcactggtctcgtacatatctctga 322
           ||||||||||| |||||||||||||   |||||||| ||||| || ||||||||||| ||
Sbjct: 241 tgttcacctgcgatttcctgatggattatatcatcttactggccttgtacatatctcgga 300

                                                                       
Query: 323 ggtctcttgggatcttgtccaagatgtccaagattttctaaccgaaggtgataccgtcaa 382
           ||| |||||||||||||||||||| ||| | |||||||||| |||||| ||| | |||||
Sbjct: 301 ggtgtcttgggatcttgtccaagacgtcaaggattttctaaacgaaggggatgctgtcaa 360

                                                                       
Query: 383 ggtcatagtggtgaatgttgatgcggagaaatcaaggataggtttgtcaatcaggcaatt 442
           ||||||||| |||||  |||||  |  ||| |||||||||| ||| || ||||| ||| |
Sbjct: 361 ggtcatagttgtgaacattgatatgacgaagtcaaggatagctttatctatcagacaact 420

                        
Query: 443 ggaggaagatcct 455
           |||||||||||||
Sbjct: 421 ggaggaagatcct 433



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 285      ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 344
                |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 35218670 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 35218611

                                                                     
Query: 345      gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 397
                |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 35218610 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 35218558



 Score =  129 bits (65), Expect = 9e-27
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                            
Query: 155      gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 213
                |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 35218879 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 35218821

                                                                            
Query: 214      gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 273
                ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 35218820 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 35218761

                             
Query: 274      aatttcctgatgg 286
                 ||||||||||||
Sbjct: 35218760 gatttcctgatgg 35218748



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 5        caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 63
                ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 35219534 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 35219476



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 407      ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
                |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 35218092 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 35218033



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 69       aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 127
                |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 35219319 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 35219261



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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                         
Query: 285   ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 344
             |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 97431 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 97372

                                                                  
Query: 345   gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 397
             |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 97371 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 97319



 Score =  129 bits (65), Expect = 9e-27
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                         
Query: 155   gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 213
             |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 97640 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 97582

                                                                         
Query: 214   gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 273
             ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 97581 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 97522

                          
Query: 274   aatttcctgatgg 286
              ||||||||||||
Sbjct: 97521 gatttcctgatgg 97509



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                        
Query: 5     caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 63
             ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 98295 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 98237



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                         
Query: 407   ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
             |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 96853 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 96794



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 69    aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 127
             |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 98080 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 98022



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 6e-34
 Identities = 104/113 (92%)
 Strand = Plus / Minus

                                                                            
Query: 285      ggaaattatcatctcactggtctcgtacatatctctgaggtctcttgggatcttgtccaa 344
                |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 35308742 ggaaattatcatcttactggccttgtacatatctctgaggtctcttgggatcttgtccaa 35308683

                                                                     
Query: 345      gatgtccaagattttctaaccgaaggtgataccgtcaaggtcatagtggtgaa 397
                |||||||  |||||| |||  ||||||||||| ||||||||||||||||||||
Sbjct: 35308682 gatgtccgggattttttaaatgaaggtgatactgtcaaggtcatagtggtgaa 35308630



 Score =  129 bits (65), Expect = 9e-27
 Identities = 118/133 (88%), Gaps = 2/133 (1%)
 Strand = Plus / Minus

                                                                            
Query: 155      gcttgtcttctctgagaaggatgccagttggt-cattgtactcttctcaagtaaagattg 213
                |||||||||||| ||||||||||| ||||||| || |  | ||||||| ||| |||||||
Sbjct: 35308951 gcttgtcttctcagagaaggatgcaagttggttcactc-attcttctctagtcaagattg 35308893

                                                                            
Query: 214      gtggtatctatgatggaattgttggttcagtgttccactatggtgcatttgttcacctgc 273
                ||| |||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||
Sbjct: 35308892 gtgctatctatgatggaattgtcggttcagttttccactacggtgcatttgttcatctgc 35308833

                             
Query: 274      aatttcctgatgg 286
                 ||||||||||||
Sbjct: 35308832 gatttcctgatgg 35308820



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 56/59 (94%)
 Strand = Plus / Minus

                                                                           
Query: 5        caactccatgcagggcttcgtgcccaaccctctcctcagccccgcgcattggtgtaaag 63
                ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 35309606 caactccctccagggcttcgtgcccaaccctctccttagccccgcgcattggtgtaaag 35309548



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                            
Query: 407      ggagaaatcaaggataggtttgtcaatcaggcaattggaggaagatcctctgctggagac 466
                |||||| |||||||||| ||| |||||||| |||||||||||||||||||| ||||||||
Sbjct: 35308164 ggagaagtcaaggatagctttatcaatcagacaattggaggaagatcctctactggagac 35308105



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 69       aaaaggcccattcaagatgttacaaaggacctagtaggttcctctgtttctgtcaaggt 127
                |||||||||||||||||||||||||||||||| || ||||| ||  |||||||||||||
Sbjct: 35309391 aaaaggcccattcaagatgttacaaaggaccttgtgggttcttccatttctgtcaaggt 35309333



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>emb|BX897696.12| Zebrafish DNA sequence from clone DKEY-111B14 in linkage group 20,
              complete sequence
          Length = 175787

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     ttcaagatgttacaaaggacct 100
              ||||||||||||||||||||||
Sbjct: 129532 ttcaagatgttacaaaggacct 129553



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>gb|AF241734.2| Homo sapiens chromosome X clone RP1-34M10 map p11.4, complete
            sequence
          Length = 119916

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 422  aggtttgtcaatcaggcaatt 442
            |||||||||||||||||||||
Sbjct: 2335 aggtttgtcaatcaggcaatt 2315



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>gb|AC108881.3| Homo sapiens chromosome X clone RP11-21D3 map p11.4, complete sequence
          Length = 163215

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   aggtttgtcaatcaggcaatt 442
             |||||||||||||||||||||
Sbjct: 86788 aggtttgtcaatcaggcaatt 86768



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>gb|AC175363.2| Pan troglodytes chromosome X clone CH251-7A1 map human ortholog p11.4,
             complete sequence
          Length = 221738

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   aggtttgtcaatcaggcaatt 442
             |||||||||||||||||||||
Sbjct: 44184 aggtttgtcaatcaggcaatt 44164



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>emb|AL670662.7| Human DNA sequence from clone XXbac-93B10 on chromosome 6, complete
             sequence
          Length = 115723

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 422   aggtttgtcaatcaggcaatt 442
             |||||||||||||||||||||
Sbjct: 39296 aggtttgtcaatcaggcaatt 39276



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>gb|AC101689.12| Mus musculus chromosome 1, clone RP23-217C21, complete sequence
          Length = 189241

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   taggttcctctgtttctgtc 122
             ||||||||||||||||||||
Sbjct: 92672 taggttcctctgtttctgtc 92691



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>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence
          Length = 174823

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ccactatggtgcatttgttc 267
              ||||||||||||||||||||
Sbjct: 102890 ccactatggtgcatttgttc 102871



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>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence
          Length = 199993

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    aatttcctgatggaaattat 293
              ||||||||||||||||||||
Sbjct: 136706 aatttcctgatggaaattat 136687



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>emb|Y15839.1|CHY15839 Cochliobolus heterostrophus pkc1, fat1 genes
          Length = 9313

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 383  ggtcatagtggtgaatgttgatgc 406
            ||||||||| ||||||||||||||
Sbjct: 7396 ggtcatagtagtgaatgttgatgc 7373



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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    tgttcacctgcaatttcctgatgg 286
              ||||||| ||||||||||||||||
Sbjct: 141081 tgttcacttgcaatttcctgatgg 141058



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>emb|CR859591.1| Pongo pygmaeus mRNA; cDNA DKFZp468N195 (from clone DKFZp468N195)
          Length = 515

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  ggcttcgtgcccaaccctct 37
           ||||||||||||||||||||
Sbjct: 237 ggcttcgtgcccaaccctct 256



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>gb|AC102433.8| Mus musculus chromosome 8, clone RP24-119F15, complete sequence
          Length = 157000

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ccactatggtgcatttgttc 267
             ||||||||||||||||||||
Sbjct: 19462 ccactatggtgcatttgttc 19481



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>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete
             sequence
          Length = 162362

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 411   aaatcaaggataggtttgtcaatcaggcaatt 442
             |||||||| || ||||||||||||||| ||||
Sbjct: 52950 aaatcaagtatgggtttgtcaatcaggaaatt 52981



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>gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, complete sequence
          Length = 77514

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  tgttcacctgcaatttcctgatgg 286
            ||||||| ||||||||||||||||
Sbjct: 9159 tgttcacttgcaatttcctgatgg 9136



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>gb|AF132039.1|AF132039 Mus musculus BAC 118I7 chromosome 6 Gpr37 gene, complete sequence
          Length = 98491

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   agtaggttcctctgtttctg 120
             ||||||||||||||||||||
Sbjct: 55144 agtaggttcctctgtttctg 55125



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 393    gtgaatgttgatgcggagaa 412
              ||||||||||||||||||||
Sbjct: 772373 gtgaatgttgatgcggagaa 772392



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>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence
          Length = 219548

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 411    aaatcaaggataggtttgtcaatcaggcaatt 442
              |||||||| || ||||||||||||||| ||||
Sbjct: 189008 aaatcaagtatgggtttgtcaatcaggaaatt 189039



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>gb|AC153888.3| Mus musculus 6 BAC RP23-428L22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse6 BAC Library) complete sequence
          Length = 178961

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   agtaggttcctctgtttctg 120
             ||||||||||||||||||||
Sbjct: 77948 agtaggttcctctgtttctg 77967


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,830,600
Number of Sequences: 3902068
Number of extensions: 3830600
Number of successful extensions: 68233
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68138
Number of HSP's gapped (non-prelim): 90
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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