| Clone Name | baal2k11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL451005.9| Human DNA sequence from clone RP11-92B10 on chromosome X Contains the 5' end of a variant of the CUL4B gene for cullin 4B and the 5' end of a variant of the gene for MCT-1 protein (MCT-1), complete sequence Length = 26768 Score = 42.1 bits (21), Expect = 0.13 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gggaaacccaggaacgtggat 52 ||||||||||||||||||||| Sbjct: 17573 gggaaacccaggaacgtggat 17593
>gb|AC100740.8| Mus musculus chromosome 1, clone RP24-421N21, complete sequence Length = 146835 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 gggaaacccaggaacgtgg 50 ||||||||||||||||||| Sbjct: 61480 gggaaacccaggaacgtgg 61498
>gb|AC166124.4| Mus musculus chromosome 1, clone RP23-105N9, complete sequence Length = 226615 Score = 38.2 bits (19), Expect = 2.0 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 gggaaacccaggaacgtgg 50 ||||||||||||||||||| Sbjct: 163737 gggaaacccaggaacgtgg 163755
>gb|AC150866.2| Bos taurus BAC CH240-290G4 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 170911 Score = 36.2 bits (18), Expect = 7.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 33 ggaaacccaggaacgtgg 50 |||||||||||||||||| Sbjct: 102567 ggaaacccaggaacgtgg 102584
>ref|XM_418096.1| PREDICTED: Gallus gallus similar to Wnt-9b protein precursor (Wnt-15) (Wnt-14b) (LOC419973), mRNA Length = 2734 Score = 36.2 bits (18), Expect = 7.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cgtctccgccaagccggg 34 |||||||||||||||||| Sbjct: 516 cgtctccgccaagccggg 499
>gb|AC129020.4| Mus musculus BAC clone RP23-234A5 from chromosome 16, complete sequence Length = 192668 Score = 36.2 bits (18), Expect = 7.7 Identities = 21/22 (95%) Strand = Plus / Plus Query: 24 gccaagccgggaaacccaggaa 45 ||||||| |||||||||||||| Sbjct: 98359 gccaagcagggaaacccaggaa 98380
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 36.2 bits (18), Expect = 7.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 33 ggaaacccaggaacgtgg 50 |||||||||||||||||| Sbjct: 1276710 ggaaacccaggaacgtgg 1276693
>gb|AY753294.1| Gallus gallus wingless-type MMTV integration site family member 9b (WNT9b) mRNA, partial cds Length = 980 Score = 36.2 bits (18), Expect = 7.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 cgtctccgccaagccggg 34 |||||||||||||||||| Sbjct: 123 cgtctccgccaagccggg 106
>gb|AC006080.1|AC006080 Homo sapiens chromosome 17, clone hRPK.394_K_10, complete sequence Length = 191111 Score = 36.2 bits (18), Expect = 7.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 33 ggaaacccaggaacgtgg 50 |||||||||||||||||| Sbjct: 132688 ggaaacccaggaacgtgg 132705 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 230,758 Number of Sequences: 3902068 Number of extensions: 230758 Number of successful extensions: 52031 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51985 Number of HSP's gapped (non-prelim): 46 length of query: 55 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 35 effective length of database: 17,155,003,908 effective search space: 600425136780 effective search space used: 600425136780 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)