ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2k05 |
|---|---|
| Clone Library Name | barley_pub |
>CR1GA_BACTU (Q45746) Pesticidal crystal protein cry1Ga (Insecticidal| delta-endotoxin CryIG(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1166 Score = 38.5 bits (88), Expect = 0.011 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 281 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 460 Q ++R+A T D + + G I +G S + +QY R R AGF +PF +S Sbjct: 506 QRYRVRIRYASTTDLQFYTNINGTTINIGNFSSTMDSGDDLQYGRFRVAGFTTPFTFSDA 565 Query: 461 TVTSAVDA 484 T + A Sbjct: 566 NSTFTIGA 573
>CR1BB_BACTU (Q45739) Pesticidal crystal protein cry1Bb (Insecticidal| delta-endotoxin CryIB(b)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1229 Score = 37.4 bits (85), Expect = 0.026 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 281 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 460 Q ++R+A T D F + G + +G SR + ++Y R AGF +PF + Sbjct: 555 QRYRVRIRYASTTDLQFFTRINGTTVNIGNFSRTMNRGDNLEYRSFRTAGFSTPFNFLNA 614 Query: 461 TVTSAVDA 484 T + A Sbjct: 615 QSTFTLGA 622
>CR1BC_BACTM (Q45774) Pesticidal crystal protein cry1Bc (Insecticidal| delta-endotoxin CryIB(c)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1233 Score = 37.4 bits (85), Expect = 0.026 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +2 Query: 281 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 460 Q ++R+A T D F + G + +G SR + ++Y R AGF +PF + Sbjct: 555 QRYRVRIRYASTTDLQFFTRINGTTVNIGNFSRTMNRGDNLEYRSFRTAGFSTPFNFLNA 614 Query: 461 TVTSAVDA 484 T + A Sbjct: 615 QSTFTLGA 622
>PK3CG_PIG (O02697) Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic| subunit gamma isoform (EC 2.7.1.153) (PI3-kinase p110 subunit gamma) (PtdIns-3-kinase subunit p110) (PI3K) (PI3Kgamma) (p120-PI3K) Length = 1102 Score = 33.9 bits (76), Expect = 0.28 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +2 Query: 269 KASWQELHDKVRFAETRDGASF-RTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPF 445 K W E++DK + +T D + + L + Q+ V+ R +ET+ ++R NA Sbjct: 103 KGQWYEIYDKYQVVQTLDCLRYWKVLHRSPGQIHVVQRHAPSEETLAFQRQLNA----LI 158 Query: 446 GYSTPTVTSAVD 481 GY V++ D Sbjct: 159 GYDVTDVSNVHD 170
>CR1JA_BACTU (Q45738) Pesticidal crystal protein cry1Ja (Insecticidal| delta-endotoxin CryIJ(a)) (Crystaline entomocidal protoxin) (133 kDa crystal protein) Length = 1167 Score = 33.9 bits (76), Expect = 0.28 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 2/83 (2%) Frame = +2 Query: 263 TGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSP 442 TG S Q ++R+A T D F + G ++ G R + ++ R AGF +P Sbjct: 504 TGPLS-QRYRVRIRYASTTDLQFFTRINGTSVNQGNFQRTMNRGDNLESGNFRTAGFSTP 562 Query: 443 FGYST--PTVTSAVDAICSLEWY 505 F +S T T A + E Y Sbjct: 563 FSFSNAQSTFTLGTQAFSNQEVY 585
>XSP1_ARATH (Q9LLL8) Xylem serine proteinase 1 precursor (EC 3.4.21.-) (AtXSP1)| (Cucumisin-like protein) Length = 749 Score = 33.9 bits (76), Expect = 0.28 Identities = 19/80 (23%), Positives = 33/80 (41%) Frame = +2 Query: 38 ARSILKAALIQRKIKSNVSLNDGDGGNIEDITTSTGASGRKIAGSMFASESSLEVRGGTD 217 AR +L ++K+K V + GG +E S G +G I + + + + T Sbjct: 385 ARYCFSDSLDRKKVKGKVMVCRMGGGGVESTIKSYGGAGAIIVSDQYLDNAQIFMAPATS 444 Query: 218 ITLDALDAYLKYLEGTGKAS 277 + D +Y+ T AS Sbjct: 445 VNSSVGDIIYRYINSTRSAS 464
>CR1ID_BACTU (Q9XDL1) Pesticidal crystal protein cry1Id (Insecticidal| delta-endotoxin CryII(d)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 33.5 bits (75), Expect = 0.37 Identities = 18/63 (28%), Positives = 29/63 (46%) Frame = +2 Query: 296 KVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTPTVTSA 475 ++R+A T + ++ G AI G S E + Y+ R GF +PF +S T Sbjct: 562 RIRYASTTNLEFHTSINGKAINQGNFSATMNRGEDLDYKAFRTVGFTTPFSFSNAQSTFT 621 Query: 476 VDA 484 + A Sbjct: 622 IGA 624
>CR1IA_BACTK (Q45752) Pesticidal crystal protein cry1Ia (Insecticidal| delta-endotoxin CryII(a)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 32.7 bits (73), Expect = 0.63 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +2 Query: 281 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 460 Q ++R+A T D ++ G AI G S E + Y+ R GF +PF + Sbjct: 557 QRYRVRIRYASTTDLQFHTSINGKAINQGNFSATMNRGEDLDYKTFRTVGFTTPFSFLDV 616 Query: 461 TVTSAVDA 484 T + A Sbjct: 617 QSTFTIGA 624
>CR1FB_BACTM (O66377) Pesticidal crystal protein cry1Fb (Insecticidal| delta-endotoxin CryIF(b)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1169 Score = 32.3 bits (72), Expect = 0.82 Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 2/83 (2%) Frame = +2 Query: 263 TGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSP 442 TG S Q ++R+A T D F + G ++ G R ++ R AGF +P Sbjct: 509 TGPLS-QRYRVRIRYASTTDLQFFTRINGTSVNQGNFQRTMNRGGNLESGNFRTAGFSTP 567 Query: 443 FGYST--PTVTSAVDAICSLEWY 505 F +S T T A + E Y Sbjct: 568 FSFSNAQSTFTLGTQAFSNQEVY 590
>CR1IC_BACTU (O87404) Pesticidal crystal protein cry1Ic (Insecticidal| delta-endotoxin CryII(c)) (Crystaline entomocidal protoxin) (81 kDa crystal protein) Length = 719 Score = 32.0 bits (71), Expect = 1.1 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = +2 Query: 281 QELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETIQYERDRNAGFLSPFGYSTP 460 Q ++ +A T D ++ G AI G S E + Y+ R GF +PF +S Sbjct: 557 QRYRVRMSYASTTDLQFHTSINGKAINQGNFSATMNRGEDLDYKTFRTVGFTTPFSFSDV 616 Query: 461 TVTSAVDA 484 T + A Sbjct: 617 QSTFTIGA 624
>CHOD_STRS0 (P12676) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 546 Score = 31.6 bits (70), Expect = 1.4 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +2 Query: 143 GASGRKIAGSMFASESSLEVRGGTDITLDALD-AYLKYLEGTGKASWQELHDKVRFAETR 319 G R+ AG + S + EV G + +LD YL GTGK + Q LH +T+ Sbjct: 235 GYMQREAAGEVPKSALATEVIYGNNHGKQSLDKTYLAAALGTGKVTIQTLHQVKTIRQTK 294 Query: 320 DG 325 DG Sbjct: 295 DG 296
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = +2 Query: 101 DGDGGNIEDITTSTGASGRKIAGSMFASES-SLEVRGGTDITLDALDAYLKYLEGTGKAS 277 D GG++EDI STG+ + G + + S + V G D+ + A+ A Sbjct: 122 DAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISA------------ 169 Query: 278 WQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAY 391 A+ RD AS G I + VI+R+ Y Sbjct: 170 ----------AKQRDSAS-----GGMIDVAVITRKDGY 192
>ATKB2_LISIN (Q926K7) Potassium-transporting ATPase B chain 2 (EC 3.6.3.12)| (Potassium-translocating ATPase B chain 2) (ATP phosphohydrolase [potassium-transporting] B chain 2) (Potassium-binding and translocating subunit B 2) Length = 686 Score = 30.8 bits (68), Expect = 2.4 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%) Frame = +2 Query: 53 KAALIQRKIKSNVSLNDGDGGNI---------EDITTSTGASGRKIAGSMFASESSLEVR 205 K LI I +++ N +G +I ED+ T+ + I + S +++ Sbjct: 329 KNYLIHYAILASIQDNTPEGKSIVTLGKDLLKEDLDTNDIRENQFIEFTAQTRMSGVDLA 388 Query: 206 GGTDITLDALDAYLKYLEGTGKASWQELHDKV 301 GT I A DA +KY++ G +L DKV Sbjct: 389 DGTRIRKGAYDAIIKYIKNIGGEIPHDLEDKV 420
>UBPY_CAEEL (Q09931) Probable ubiquitin carboxyl-terminal hydrolase K02C4.3 (EC| 3.1.2.15) (Ubiquitin thioesterase) (Ubiquitin-specific processing protease) (Deubiquitinating enzyme) Length = 1302 Score = 30.4 bits (67), Expect = 3.1 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Frame = +2 Query: 227 DALDAY-LKYLEGTGKASWQELHDKVRFAETRDGASFRTLFGNAIQLGVISRRRAYQETI 403 DA AY L Y+ A W DK+ E +F T+ + +Q V+ +R ++E + Sbjct: 781 DAPSAYMLMYVRSD--AEWLVSADKLTALE-----AFETIPPD-LQEKVLQKRDEFKEKL 832 Query: 404 QYERDRNAGFLSPFGYSTPTVTSAVDAICSLEWY 505 Q R+ F +PTV S + S WY Sbjct: 833 QRFRENKEFNYQQFSVDSPTVQSTEETPSSFSWY 866
>CRYD_SYNY3 (P77967) Cryptochrome DASH| Length = 489 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = +2 Query: 305 FAETRDG---ASFRTLFGNAIQLGVISRRRAYQETIQYERDR 421 + ETR+G A + + F + LG +S R YQE +YE++R Sbjct: 236 YKETRNGMVGADYSSKFSPWLALGCLSPRFIYQEVKRYEQER 277
>PMD1_YEAST (P32634) Negative regulator of sporulation PMD1| Length = 1753 Score = 29.3 bits (64), Expect = 7.0 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%) Frame = -3 Query: 348 PNSVRNEAPSLVSAKRTLSCNSCQLAFPVPSRYFR*ASKASSVISVPPLTSSELSDAN-- 175 P+S+ +P+ + R S +A P SR AS AS+ SV TS ++N Sbjct: 851 PSSISKASPAEKAFSRRKSSALRFIASPNQSRQTSFASTASTA-SVVSSTSGRRRNSNQI 909 Query: 174 --IEPAIFLPDAPVLVVISSMFPP 109 + + LP++P+L V++ PP Sbjct: 910 SHLGSSASLPNSPILPVLNIPLPP 933
>MCS4_SCHPO (P87323) Response regulator mcs4 (Mitotic catastrophe suppressor 4)| Length = 522 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/64 (26%), Positives = 29/64 (45%) Frame = -3 Query: 270 FPVPSRYFR*ASKASSVISVPPLTSSELSDANIEPAIFLPDAPVLVVISSMFPPSPSFKE 91 FP+ + A + S + PP SSEL + P+ +L V+ + +P F + Sbjct: 35 FPIRISQYYDAPELSIRVVAPPNASSELQSRELS-----PNESILFVMETYYPHGQDFND 89 Query: 90 TLLL 79 LL+ Sbjct: 90 ALLV 93
>RUVX_CHLCV (Q822T1) Putative Holliday junction resolvase (EC 3.1.-.-)| Length = 163 Score = 28.9 bits (63), Expect = 9.1 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = -2 Query: 427 SIAISLILNSFLVSSPPRYDSKLNC 353 +IA +LIL SFL SSPP+ K C Sbjct: 133 TIAATLILTSFLESSPPKIFLKKTC 157
>ERF5_NICSY (Q9LW48) Ethylene-responsive transcription factor 5| (Ethylene-responsive element-binding factor 5 homolog) (EREBP-4) (NsERF4) Length = 282 Score = 28.9 bits (63), Expect = 9.1 Identities = 21/80 (26%), Positives = 38/80 (47%) Frame = +2 Query: 176 FASESSLEVRGGTDITLDALDAYLKYLEGTGKASWQELHDKVRFAETRDGASFRTLFGNA 355 FA+E R GT + L D ++ + +A+++ K + A+F+ F N Sbjct: 149 FAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNNE 208 Query: 356 IQLGVISRRRAYQETIQYER 415 I+ V S R+ +ET+ E+ Sbjct: 209 IRPLVNSSRKRVRETVNEEQ 228
>HTPG_BRAJA (Q89CK8) Chaperone protein htpG (Heat shock protein htpG) (High| temperature protein G) Length = 625 Score = 28.9 bits (63), Expect = 9.1 Identities = 18/42 (42%), Positives = 24/42 (57%) Frame = +2 Query: 134 TSTGASGRKIAGSMFASESSLEVRGGTDITLDALDAYLKYLE 259 TS+G SG +IA + + E + V GT+I L D KYLE Sbjct: 156 TSSGGSGFEIARA--SEEDAARVTRGTEIVLHLKDDAKKYLE 195 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,224,027 Number of Sequences: 219361 Number of extensions: 1453956 Number of successful extensions: 3796 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 3719 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3795 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
