>FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 652

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 185 PNARLPAQNLSANRTQAQHPSSETHPGH 102
           PN+ +PA    A+  +  +PSS THPGH
Sbjct: 497 PNSVMPAYGSQASHNKMMNPSSHTHPGH 524

>CCD53_HUMAN (Q9Y3C0) Coiled-coil domain-containing protein 53|
          Length = 194

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +2

Query: 188 LNVVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKES 361
           LN+++ +L   SS    DD  +  SP+ V  VTN    +A +E   ++S +   L+ES
Sbjct: 66  LNILDAKL---SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQES 120

>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
 Frame = -2

Query: 455 QISENLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQ-HQHPTQHCW*H 279
           Q  +  +   Q+ Q    HH+HQ Q +   +       FH       Q H HP Q    H
Sbjct: 234 QQQQQFHDHHQQKQQFHDHHHHQQQQQFHDHQQQQQ-QFHDHQQQQHQFHDHPQQKQQFH 292

Query: 278 GAPALDLQQFQHHHKYQMS*AF 213
             P    Q   HHH+ Q    F
Sbjct: 293 DHPQQQQQFHDHHHQQQQKQQF 314

>FOXC2_MOUSE (Q61850) Forkhead box protein C2 (Forkhead-related protein FKHL14)|
           (Mesenchyme fork head protein 1) (MFH-1 protein)
           (Transcription factor FKH-14)
          Length = 494

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 25/67 (37%), Positives = 29/67 (43%)
 Frame = -2

Query: 212 EALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPGHTHLVSLSGHP*SCTSHTQES*NF 33
           EALS   S P + L A NL+A +  A   S   H  H HL     HP +     Q     
Sbjct: 355 EALSDHPSGPGSPLGALNLAAGQEGALGASGHHHQHHGHL-----HPQAPPPAPQ----- 404

Query: 32  GQPPAPQ 12
             PPAPQ
Sbjct: 405 -PPPAPQ 410

>FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 655

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 14/59 (23%)
 Frame = -2

Query: 206 LSPQHSAPNARLPAQN--------LSANRTQAQH-----PSSETHPGHTHLVS-LSGHP 72
           + P  + PN+R+  QN        +S   +QA H     PSS THPGH    S ++G P
Sbjct: 480 VDPGVAQPNSRVLGQNVMMGPNSVMSTYGSQASHNKMMNPSSHTHPGHAQQTSAVNGRP 538

>YDZ1_SCHPO (O13709) Hypothetical protein C14C4.01c in chromosome I|
          Length = 244

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/66 (27%), Positives = 33/66 (50%)
 Frame = +2

Query: 176 ERLELNVVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLK 355
           E + L   +  LQ       + D+G A+SP+R+ H++++  +     N LK     E + 
Sbjct: 29  ELISLGSSQDALQRSGIRSAHGDSGYASSPLRMEHLSSSTII---INNQLKKIDVNESIP 85

Query: 356 ESYSLH 373
           E+ +LH
Sbjct: 86  ENSTLH 91

>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/89 (24%), Positives = 39/89 (43%)
 Frame = -2

Query: 407 RCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPALDLQQFQHHHKYQ 228
           R + + ++Q     Y++L   ++       + H HP   CW  G   +D++  + + KYQ
Sbjct: 86  RVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSG---VDVETQRQNQKYQ 142

Query: 227 MS*AFEALSPQHSAPNARLPAQNLSANRT 141
                  L P+ S  +   P  N+ A RT
Sbjct: 143 DPFVAVVLDPKRSLES---PYVNIGAFRT 168

>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 355

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
 Frame = -2

Query: 425 QRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQ---HQHPTQHCW*HGAPALDLQ 255
           Q+ Q    HH+HQ Q +    +      FH       Q   H HP Q    H  P    Q
Sbjct: 217 QQQQQFHDHHHHQQQQQQFHDHHQQKQQFHDHHQQQQQQQFHDHPQQQQQFHDHPQQKQQ 276

Query: 254 QFQHHHKYQMS*AF 213
              HHH  Q    F
Sbjct: 277 FHDHHHHQQQKQQF 290

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 20/111 (18%), Positives = 54/111 (48%)
 Frame = +2

Query: 14  EELEVVRNSSSPVYGRYKIMDDQTEILDECGLDVFRMKDAVLECDLPRDSGQVDERLELN 193
           EE++ V ++        K+M++ TEI +  GL+  R + + L+C + + +G    R    
Sbjct: 387 EEIKSVNDNRYITETSNKVMENFTEIKNLGGLEFLRSEASSLDCLIDKVNGTY--RHCCQ 444

Query: 194 VVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKE 346
            +++ +  + S     + G  +  +++    + ++++ +   N K + +K+
Sbjct: 445 ALDEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDTIQKD 495

>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)|
           (KP)
          Length = 634

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 28/113 (24%), Positives = 36/113 (31%)
 Frame = -2

Query: 443 NLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPAL 264
           N  + AQ+      HH+HQ Q +  + +       H        HQ P  H   HG    
Sbjct: 52  NKRTLAQKQHEHHHHHHHQHQHQHQAPHQAH----HHHHHGEVNHQAPQVHQQVHGQDQA 107

Query: 263 DLQQFQHHHKYQMS*AFEALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPG 105
                 HHH+         L PQ        P  N    +TQ      E  PG
Sbjct: 108 HHHHHHHHHQ---------LQPQQLQGTVANPPSNEPVVKTQV---FREARPG 148

>DHET_ACEEU (Q44002) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
          Length = 739

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 106 PGCVSDEGCCA*VRFAERFWAGRRAFG 186
           PG ++D+GCC  V     +W G+  FG
Sbjct: 135 PGNIADKGCCDTVNRGAAYWNGKVYFG 161

>TAL_BUCAP (Q8KA27) Transaldolase (EC 2.2.1.2)|
          Length = 316

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +2

Query: 62  YKIMDDQTEILDECGLDVFRMKDAVLECDLPRDSGQVDERLELNVVEKELQMLSSFDTYD 241
           YKI++   +IL + G+++ +     +       S +VD RL  N  +  L+     D Y+
Sbjct: 67  YKIVNASDKILVDLGVEILKHIPGYI-------SSEVDARLSFNKEKCILKAKKIIDMYE 119

Query: 242 DAGIAASPVRVR 277
           + GI+ + V ++
Sbjct: 120 EKGISRNRVLIK 131

>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)|
           (HRPI) (Fragment)
          Length = 473

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 28/113 (24%), Positives = 36/113 (31%)
 Frame = -2

Query: 443 NLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPAL 264
           N  + AQ+      HH+HQ Q +  + +       H        HQ P  H   HG    
Sbjct: 52  NKRTLAQKQHEHHHHHHHQHQHQHQAPHQAH----HHHHHGEVNHQAPQVHQQVHGQDQA 107

Query: 263 DLQQFQHHHKYQMS*AFEALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPG 105
                 HHH+         L PQ        P  N    +TQ      E  PG
Sbjct: 108 HHHHHHHHHQ---------LQPQQLQGTVANPPSNEPVVKTQV---FREARPG 148

>DHET_ACEPO (P28036) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
          Length = 738

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 106 PGCVSDEGCCA*VRFAERFWAGRRAFG 186
           PG ++D+GCC  V     +W G+  FG
Sbjct: 135 PGNIADKGCCDTVNRGAAYWNGKVYFG 161

>RPOB_LACLA (Q9CEN6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1196

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 239 DDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKESYSLHPFPETDD 394
           +D+  A   V  RH  NN+E++A   + +  S  K+ +  + +  PF E DD
Sbjct: 587 EDSRFANETVMARHTGNNIEVEASTADYMDVS-PKQVIAVAAACIPFLENDD 637

>CAR2_DICDI (P34907) Cyclic AMP receptor 2 (cAMP receptor 2)|
          Length = 375

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 21/90 (23%), Positives = 36/90 (40%)
 Frame = +2

Query: 167 QVDERLELNVVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKE 346
           Q  +RLELN        +       D G  +S V +  ++    L  DAENN+++  E E
Sbjct: 283 QAQQRLELNKNNNNPSPIMRSKNALDNGADSSVVELPCLSKADSLSLDAENNIETPKENE 342

Query: 347 YLKESYSLHPFPETDDYDDTYEFGDVGPLN 436
                +  H     + Y++     ++   N
Sbjct: 343 NQNHHHHHHHHHHHNHYNNNNNNNNINNKN 372

>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/49 (32%), Positives = 20/49 (40%)
 Frame = -2

Query: 314 QHQHPTQHCW*HGAPALDLQQFQHHHKYQMS*AFEALSPQHSAPNARLP 168
           Q+Q P QH   + AP    Q   HHH+ Q       +  Q  A N   P
Sbjct: 25  QYQQPPQHHQHYEAPQHQQQHQHHHHQQQQQQHPVPVPKQEQADNTSAP 73

>TAL_PHOPR (Q6LLF0) Transaldolase (EC 2.2.1.2)|
          Length = 316

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/79 (21%), Positives = 34/79 (43%)
 Frame = +2

Query: 41  SSPVYGRYKIMDDQTEILDECGLDVFRMKDAVLECDLPRDSGQVDERLELNVVEKELQML 220
           +S  Y + +  D   ++ D C +    +   +L+    R S +VD RL  +     ++  
Sbjct: 54  ASIAYAKAQSNDKTQQVADTCDMLAVNIGKEILKVVPGRISTEVDARLSYDTEGSVIKAR 113

Query: 221 SSFDTYDDAGIAASPVRVR 277
                Y+DAGI    + ++
Sbjct: 114 QLIKMYNDAGITNDRILIK 132

>CH60_PARDE (Q9Z462) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 545

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
 Frame = +2

Query: 203 KELQMLSSFDTYDDAGIA----ASPVRVRHVTNNVELD-ADAENNLKSSGEKEYLKESYS 367
           K L+ LS  ++  DAGIA    A    +R +  N  +D A     ++ S +K +   +  
Sbjct: 424 KVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNA-- 481

Query: 368 LHPFPETDDYDDTYEFGDVGP 430
                +T++Y D ++FG + P
Sbjct: 482 -----QTEEYGDMFKFGVIDP 497

>TLR7_MOUSE (P58681) Toll-like receptor 7 precursor|
          Length = 1050

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -2

Query: 404 CHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPALDLQQ 252
           C +N   Q  D ++NSL+++   R  S+  QH  PT          LDL Q
Sbjct: 273 CENNSPLQIHDNAFNSLTELKVLRLHSNSLQHVPPTWFKNMRNLQELDLSQ 323

>DHET_GLUOX (O05542) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
           (G3-ADH subunit I)
          Length = 757

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 106 PGCVSDEGCCA*VRFAERFWAGRRAFG 186
           PG ++D GCC  V     +W G+  FG
Sbjct: 133 PGNIADRGCCDTVSRGAAYWNGKVYFG 159

>MK14B_BRARE (Q9DGE1) Mitogen-activated protein kinase 14b (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38b) (MAP kinase
           p38b) (zp38b)
          Length = 348

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/63 (25%), Positives = 27/63 (42%)
 Frame = +2

Query: 236 YDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKESYSLHPFPETDDYDDTYEF 415
           + D  I A+P+ V  +   + LD D       +    Y  + +     PE D YD ++E 
Sbjct: 271 FADVFIGANPLAVDLLEKMLVLDTDKRITASQALAHPYFAQYHDPDDEPEADPYDQSFES 330

Query: 416 GDV 424
            D+
Sbjct: 331 RDL 333

>RO52_MOUSE (Q62191) 52 kDa Ro protein (Sjoegren syndrome type A antigen)|
           (SS-A) (Ro(SS-A)) (52 kDa ribonucleoprotein autoantigen
           Ro/SS-A) (Tripartite motif protein 21)
          Length = 470

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +2

Query: 275 RHVTNNVE-LDADAENNLKSSGEKEYLKESYSLHPFPETD 391
           RH+ N VE L   A+N  KS+ E   +K    LH F E D
Sbjct: 71  RHIANMVENLKQIAQNTKKSTQETHCMKHGEKLHLFCEED 110

>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 311

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
 Frame = -2

Query: 455 QISENLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFH------RCFSDCFQ-----H 309
           Q  +  +   Q+ Q    HH+HQ Q +   +      L +      + F D  Q     H
Sbjct: 178 QQKQQFHDHQQQQQQFHDHHHHQQQQQFHDHQQQQQQLHNHHHQQQQQFHDYPQQQQQFH 237

Query: 308 QHPTQHCW*HGAPALDLQQFQHHHKYQ 228
            HP Q    H  P    QQF  HH+ Q
Sbjct: 238 DHPQQKQQFHDRPQ-QQQQFHDHHQQQ 263

>SESN3_MOUSE (Q9CYP7) Sestrin-3|
          Length = 492

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
 Frame = +2

Query: 143 CDLPRDSGQVDERLELNVVEKELQMLSSFDTYDDAG-IAASPVRVRHVTNNVELDADAEN 319
           CDL  D          N +E      S+F   D  G + A   R++ +  + E D     
Sbjct: 235 CDLAND----------NSIENTSLAGSNFGIVDSLGELEALMERMKRLQEDREDDETTRE 284

Query: 320 NLKSSGEKE-----YLKESYSLHPFPETDDYDDTYEFGDV 424
            + +  EKE     ++    +LH FP +D  DD     DV
Sbjct: 285 EMTTRFEKEKKESLFVVPGETLHAFPHSDFEDDVIVTADV 324

>MK14B_CYPCA (Q9I958) Mitogen-activated protein kinase 14b (EC 2.7.11.24)|
           (Mitogen-activated protein kinase p38b) (MAP kinase
           p38b) (cp38b)
          Length = 361

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/63 (23%), Positives = 27/63 (42%)
 Frame = +2

Query: 236 YDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKESYSLHPFPETDDYDDTYEF 415
           + D  + A+P+ V  +   + LD D       +    Y  + +     PE D YD ++E 
Sbjct: 271 FADVFVGANPMAVDLLEKMLVLDTDKRITASQALAHPYFAQYHDPDDEPEADPYDQSFES 330

Query: 416 GDV 424
            D+
Sbjct: 331 RDL 333

>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)|
          Length = 544

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 24/72 (33%), Positives = 29/72 (40%), Gaps = 10/72 (13%)
 Frame = -2

Query: 257 QQFQHHHKYQMS*AFEALSPQHSAPNARLPAQNLSANRT-------QAQH---PSSETHP 108
           QQ  HH+    S +    SP HS  N  +   N  A+          A H   P   THP
Sbjct: 99  QQLHHHNNNNNSGSSGGSSPAHSNNNNNINGDNCEASNVAGVGVLPSALHHPQPHPPTHP 158

Query: 107 GHTHLVSLSGHP 72
            HTH  +L  HP
Sbjct: 159 -HTHPHALM-HP 168

>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa|
           helicase (EC 3.6.1.-)
          Length = 2142

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
 Frame = +2

Query: 152 PRDSGQVDERLELNVVEKELQMLSSFDTY-----DDAGIAASPVRVRHVTNNVEL-DADA 313
           P +  Q+DE   +NV  +E +  S  D Y     DDA       R+ H  +   L + +A
Sbjct: 194 PNNEEQIDETYGINVQFEESEEESDNDMYGEIRDDDAQDEGEEARIDHTLHAENLANEEA 253

Query: 314 ENNLKSSGEKEYLKESYSLHP 376
            NN         +K+  SLHP
Sbjct: 254 ANN---------VKKERSLHP 265


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,326,115
Number of Sequences: 219361
Number of extensions: 1287014
Number of successful extensions: 4319
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4305
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)