ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2j14 |
|---|---|
| Clone Library Name | barley_pub |
>ALK_HUMAN (Q9UM73) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1620 Score = 29.6 bits (65), Expect = 2.0 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -2 Query: 50 WGWEXRLGFGVGGRG 6 WGWE R GFG GG G Sbjct: 913 WGWETRGGFGGGGGG 927
>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1621 Score = 29.6 bits (65), Expect = 2.0 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -2 Query: 50 WGWEXRLGFGVGGRG 6 WGWE R GFG GG G Sbjct: 917 WGWETRGGFGGGGGG 931
>RR19_PORPU (P51310) Chloroplast 30S ribosomal protein S19| Length = 92 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = +3 Query: 207 RQLREGQFPDLNLLXVVEALNTGG 278 R + +G F D++LL +EALNT G Sbjct: 3 RSIHKGPFIDVSLLTRIEALNTSG 26
>PROA_COREF (Q8FN87) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 438 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +3 Query: 171 RRRTTKASEAADRQLREGQFPDLNLLXVVEALNTGGLTLH 290 + R A + L + PD++ L VV AL G+T+H Sbjct: 269 KTRRCSVCNATETALIDSALPDVDKLRVVRALQDAGVTVH 308
>GYRA_MYCLE (Q57532) DNA gyrase subunit A (EC 5.99.1.3) [Contains: Mle gyrA| intein] Length = 1273 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = -3 Query: 307 VRQAH*WRVRPPVLSASTTXSKFRSGNCPSRSCRSAASDALVVRLLFG 164 VR A W +R P++ GN P + R S +VRLLFG Sbjct: 98 VRMAQPWSLRYPLVDGQGNFGS--PGNDPPAAMRYCVSGNSLVRLLFG 143
>CCNK_MOUSE (O88874) Cyclin-K| Length = 554 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = -1 Query: 276 PQY*VLQPLXASSGPETVPPEVVGLQPPTP 187 P Y L P AS P T+PP G PP P Sbjct: 458 PSYGALPP--ASFPPPTIPPPTPGYPPPPP 485
>NBR1_PONPY (Q5RC94) Next to BRCA1 gene 1 protein (Neighbor of BRCA1 gene 1| protein) Length = 894 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 3/42 (7%) Frame = -1 Query: 303 DRLINGE*DPQY*VLQPLXASSGP-ETVP--PEVVGLQPPTP 187 +RL GE PQ + + +S ETVP PEVV L PP P Sbjct: 709 ERLPGGENQPQEHSISDIFTTSQTLETVPLIPEVVELPPPLP 750
>IF2_BURPS (Q63TP8) Translation initiation factor IF-2| Length = 975 Score = 27.3 bits (59), Expect = 9.8 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Frame = -2 Query: 287 ESETPSI-ECFNHXKQVQVRKLSLPK-LSVCSLRRLGSPSPLWNPCRTXRAHAAAM---K 123 E+E +I E N ++ QV+ + PK + + + L P + AAA K Sbjct: 256 EAEARAIREMMNTPRRAQVKAVEPPKPAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAK 315 Query: 122 PQA*GKPI---XPPGEFRRLAGVGXSGWGWEXRLGFGVGGRGE 3 A G P P G+ + G G SGW + G+ RG+ Sbjct: 316 KPASGAPAPAAAPAGDRTKKPGTGKSGWQDDAAKRRGIKTRGD 358
>IF2_BURP1 (Q3JSY9) Translation initiation factor IF-2| Length = 975 Score = 27.3 bits (59), Expect = 9.8 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Frame = -2 Query: 287 ESETPSI-ECFNHXKQVQVRKLSLPK-LSVCSLRRLGSPSPLWNPCRTXRAHAAAM---K 123 E+E +I E N ++ QV+ + PK + + + L P + AAA K Sbjct: 256 EAEARAIREMMNTPRRAQVKAVEPPKPAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAK 315 Query: 122 PQA*GKPI---XPPGEFRRLAGVGXSGWGWEXRLGFGVGGRGE 3 A G P P G+ + G G SGW + G+ RG+ Sbjct: 316 KPASGAPAPAAAPAGDRTKKPGTGKSGWQDDAAKRRGIKTRGD 358
>IF2_BURMA (Q62KK9) Translation initiation factor IF-2| Length = 975 Score = 27.3 bits (59), Expect = 9.8 Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Frame = -2 Query: 287 ESETPSI-ECFNHXKQVQVRKLSLPK-LSVCSLRRLGSPSPLWNPCRTXRAHAAAM---K 123 E+E +I E N ++ QV+ + PK + + + L P + AAA K Sbjct: 256 EAEARAIREMMNTPRRAQVKAVEPPKPAEPPAAKAAEAKGTLHKPAKPAGEAAAARPAAK 315 Query: 122 PQA*GKPI---XPPGEFRRLAGVGXSGWGWEXRLGFGVGGRGE 3 A G P P G+ + G G SGW + G+ RG+ Sbjct: 316 KPASGAPAPAAAPAGDRTKKPGTGKSGWQDDAAKRRGIKTRGD 358
>DDR1_RAT (Q63474) Epithelial discoidin domain-containing receptor 1| precursor (EC 2.7.10.1) (Epithelial discoidin domain receptor 1) (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (Protein- Length = 910 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = -2 Query: 185 GSPSPLW-NPCRTXRAHAAAMKPQA*GKPIXPP 90 G P+P W P T M+P+ G P+ PP Sbjct: 525 GPPTPAWAKPTNTQACSGDYMEPEKPGAPLLPP 557
>SN1L2_HUMAN (Q9H0K1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 926 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Frame = -1 Query: 261 LQPLXASSGPETVPP---EVVGLQPPTP 187 LQPL ++SGP PP ++ QPP P Sbjct: 799 LQPLPSTSGPRAAPPLPTQLQQQQPPPP 826
>DDR1_MOUSE (Q03146) Epithelial discoidin domain-containing receptor 1| precursor (EC 2.7.10.1) (Epithelial discoidin domain receptor 1) (Tyrosine kinase DDR) (Discoidin receptor tyrosine kinase) (Tyrosine-protein kinase CAK) (Cell adhesion kinase) (Protei Length = 911 Score = 27.3 bits (59), Expect = 9.8 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%) Frame = -2 Query: 185 GSPSPLW-NPCRTXRAHAAAMKPQA*GKPIXPP 90 G P+P W P T M+P+ G P+ PP Sbjct: 526 GPPTPAWAKPTNTQACSGDYMEPEKPGAPLLPP 558
>HMIN_DROME (P05527) Homeobox protein invected| Length = 576 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +2 Query: 191 VGGCRPTTSGGTVSGPELAXSG*STQYWGSHSPLMSLSXTGSPL 322 +G GG+VSG S S G+ SPL + +G PL Sbjct: 296 IGALSGNIGGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPL 339 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,387,101 Number of Sequences: 219361 Number of extensions: 732212 Number of successful extensions: 1905 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1845 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1905 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
