>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 101/114 (88%), Gaps = 7/114 (6%)
 Strand = Plus / Minus

                                                                         
Query: 43    tgtaactttatctggttaggttt--atgttcaaag--ttgatagagtgact-cagtgtgg 97
             |||||||| ||||| ||||||||  |||||||||   |||| | ||||||| ||||||||
Sbjct: 54636 tgtaacttaatctgtttaggtttttatgttcaaaagtttgacatagtgacttcagtgtgg 54577

                                                                   
Query: 98    ggggatgaggctagttatgattttgtagctaggttaattcttccatttgctttt 151
             ||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 54576 ggg-atgcggctagttatgattttgtagctaggtt-attcttccatttgctttt 54525



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 171   cattccaactgtgcattgtagcatctt 197
             |||||||||||||||||||||||||||
Sbjct: 54508 cattccaactgtgcattgtagcatctt 54482

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 101/114 (88%), Gaps = 7/114 (6%)
 Strand = Plus / Minus

                                                                            
Query: 43       tgtaactttatctggttaggttt--atgttcaaag--ttgatagagtgact-cagtgtgg 97
                |||||||| ||||| ||||||||  |||||||||   |||| | ||||||| ||||||||
Sbjct: 21241162 tgtaacttaatctgtttaggtttttatgttcaaaagtttgacatagtgacttcagtgtgg 21241103

                                                                      
Query: 98       ggggatgaggctagttatgattttgtagctaggttaattcttccatttgctttt 151
                ||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 21241102 ggg-atgcggctagttatgattttgtagctaggtt-attcttccatttgctttt 21241051



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                           
Query: 171      cattccaactgtgcattgtagcatctt 197
                |||||||||||||||||||||||||||
Sbjct: 21241034 cattccaactgtgcattgtagcatctt 21241008

>gb|AC153009.4| Mus musculus BAC clone RP23-408I18 from chromosome 9, complete sequence
          Length = 194871

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   ttcttccatttgcttttatata 156
             ||||||||||||||||||||||
Sbjct: 57688 ttcttccatttgcttttatata 57667

>gb|AC026100.19| Homo sapiens 3 BAC RP11-449F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 209521

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 105   aggctagttatgattttgtagc 126
             ||||||||||||||||||||||
Sbjct: 74157 aggctagttatgattttgtagc 74136

>dbj|AP002840.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-159N11, complete
             sequence
          Length = 177031

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 80    tagagtgactcagtgtgggggg 101
             ||||||||||||||||||||||
Sbjct: 71606 tagagtgactcagtgtgggggg 71627

>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0049B20, complete sequence
          Length = 131337

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   attcttccatttgcttttata 154
             |||||||||||||||||||||
Sbjct: 52714 attcttccatttgcttttata 52734

>gb|AY061747.1| Bugula dentata cytochrome c oxidase subunit I (COI) gene, partial
           cds; mitochondrial gene for mitochondrial product
          Length = 545

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 205 tttatcatcaaatctagctca 225
           |||||||||||||||||||||
Sbjct: 284 tttatcatcaaatctagctca 304

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 134      attcttccatttgcttttata 154
                |||||||||||||||||||||
Sbjct: 26999426 attcttccatttgcttttata 26999446

>gb|AC012448.10| Homo sapiens BAC clone RP11-320H11 from 2, complete sequence
          Length = 17838

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 200  atgtgtttatcatcaaatctagctc 224
            |||| ||||||||||||||||||||
Sbjct: 2280 atgtctttatcatcaaatctagctc 2256

>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence
          Length = 278172

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    ttaattcttccatttgctttt 151
              |||||||||||||||||||||
Sbjct: 173124 ttaattcttccatttgctttt 173144

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 134      attcttccatttgcttttata 154
                |||||||||||||||||||||
Sbjct: 27326479 attcttccatttgcttttata 27326499

>gb|U43282.1| Caenorhabditis elegans cosmid T22E5, complete sequence
          Length = 34497

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   tcaaatctagctcagaaaat 231
             ||||||||||||||||||||
Sbjct: 14276 tcaaatctagctcagaaaat 14257

>ref|XM_644245.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (316.t00007)
            partial mRNA
          Length = 1323

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  ttaattcttccatttgcttt 150
            ||||||||||||||||||||
Sbjct: 1168 ttaattcttccatttgcttt 1149

>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome
          Length = 236120

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 131   ttaattcttccatttgcttttata 154
             |||||| |||||||||||||||||
Sbjct: 96685 ttaatttttccatttgcttttata 96662

>gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complete sequence
          Length = 168742

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    agcatcttgaatgtgtttat 209
              ||||||||||||||||||||
Sbjct: 107832 agcatcttgaatgtgtttat 107851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,483,669
Number of Sequences: 3902068
Number of extensions: 2483669
Number of successful extensions: 44791
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44731
Number of HSP's gapped (non-prelim): 58
length of query: 247
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 225
effective length of database: 17,147,199,772
effective search space: 3858119948700
effective search space used: 3858119948700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)