>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 335      gcctgaggtacatattcctgctcaacaa 362
                ||||||||||||| ||||||||||||||
Sbjct: 32365662 gcctgaggtacattttcctgctcaacaa 32365635

>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1143G03
          Length = 137770

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 335   gcctgaggtacatattcctgctcaacaa 362
             ||||||||||||| ||||||||||||||
Sbjct: 45159 gcctgaggtacattttcctgctcaacaa 45132

>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0053G03
          Length = 101901

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 335   gcctgaggtacatattcctgctcaacaa 362
             ||||||||||||| ||||||||||||||
Sbjct: 97947 gcctgaggtacattttcctgctcaacaa 97920

>gb|AC132614.3| Mus musculus BAC clone RP23-298K1 from 6, complete sequence
          Length = 198160

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 332   caagcctgaggtacatattcctg 354
             |||||||||||||||||||||||
Sbjct: 78683 caagcctgaggtacatattcctg 78661

>gb|AC137967.14| Mus musculus chromosome 10, clone RP24-323I24, complete sequence
          Length = 199669

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 304   ctgaggaaatcagaggtatgc 324
             |||||||||||||||||||||
Sbjct: 26313 ctgaggaaatcagaggtatgc 26293

>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence
          Length = 216612

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   ctgaggaaatcagaggtatgc 324
             |||||||||||||||||||||
Sbjct: 66717 ctgaggaaatcagaggtatgc 66737

>emb|Z48334.1|CEF10B5 Caenorhabditis elegans Cosmid F10B5, complete sequence
          Length = 29132

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 354   gctcaacaatttctttttcgtagaa 378
             |||||||||| ||||||||||||||
Sbjct: 28861 gctcaacaatatctttttcgtagaa 28837

>ref|NM_063312.2| Caenorhabditis elegans RNA-dependent RNA polymerase Family family
            member (rrf-3) (rrf-3) mRNA, complete cds
          Length = 5384

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 354  gctcaacaatttctttttcgtagaa 378
            |||||||||| ||||||||||||||
Sbjct: 4912 gctcaacaatatctttttcgtagaa 4888

>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    attcctgctcaacaatttcttttt 371
              |||||||||||||| |||||||||
Sbjct: 148988 attcctgctcaacactttcttttt 148965

>gb|AC123073.4| Mus musculus BAC clone RP23-111E4 from 6, complete sequence
          Length = 191693

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 304   ctgaggaaatcagaggtatgctcagatc 331
             |||||||||||||| |||| ||||||||
Sbjct: 13029 ctgaggaaatcagaagtattctcagatc 13002

>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced
          Length = 1285452

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aggaggacaaatgggctatt 132
              ||||||||||||||||||||
Sbjct: 889950 aggaggacaaatgggctatt 889931

>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete
              sequence
          Length = 152632

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     gttggagacacgaggagaca 61
              ||||||||||||||||||||
Sbjct: 142622 gttggagacacgaggagaca 142603

>emb|AL606689.4|OSJN00078 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042N22,
            complete sequence
          Length = 152676

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   gttggagacacgaggagaca 61
            ||||||||||||||||||||
Sbjct: 3764 gttggagacacgaggagaca 3745

>gb|AC023948.13| Homo sapiens chromosome 8, clone RP11-669B22, complete sequence
          Length = 195981

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aggaggacaaatgggctatt 132
              ||||||||||||||||||||
Sbjct: 115517 aggaggacaaatgggctatt 115498

>gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosome 17, complete
             sequence
          Length = 183535

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   gatgcttcttggggacatgt 464
             ||||||||||||||||||||
Sbjct: 93734 gatgcttcttggggacatgt 93715

>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene,
              alternatively spliced, complete cds
          Length = 1421559

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    aggaggacaaatgggctatt 132
              ||||||||||||||||||||
Sbjct: 889950 aggaggacaaatgggctatt 889931

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 42      gttggagacacgaggagaca 61
               ||||||||||||||||||||
Sbjct: 1483598 gttggagacacgaggagaca 1483579

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 437      gctatattgatgcttcttgg 456
                ||||||||||||||||||||
Sbjct: 16654397 gctatattgatgcttcttgg 16654416

>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   gctatattgatgcttcttgg 456
             ||||||||||||||||||||
Sbjct: 31452 gctatattgatgcttcttgg 31471

>dbj|AP004884.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0519B12
          Length = 147542

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   gctatattgatgcttcttgg 456
             ||||||||||||||||||||
Sbjct: 96364 gctatattgatgcttcttgg 96383

>gb|AC121247.2| Homo sapiens chromosome 3 clone RP11-3B7, complete sequence
          Length = 170787

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    catggaggaggacaaatggg 127
              ||||||||||||||||||||
Sbjct: 126228 catggaggaggacaaatggg 126209

>gb|AC147617.3| Mus musculus BAC clone RP23-442G17 from 6, complete sequence
          Length = 192625

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 304   ctgaggaaatcagaggtatgctcagatc 331
             |||||||||||||| |||| ||||||||
Sbjct: 78629 ctgaggaaatcagaagtattctcagatc 78656

>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 348    attcctgctcaacaatttcttttt 371
              |||||||||||||| |||||||||
Sbjct: 123857 attcctgctcaacactttcttttt 123834

>emb|AL663063.14| Mouse DNA sequence from clone RP23-407H16 on chromosome 2, complete
              sequence
          Length = 211815

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ggaagcccaaagcatattca 24
              ||||||||||||||||||||
Sbjct: 164299 ggaagcccaaagcatattca 164318

>dbj|AP005404.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-94H14, complete
             sequence
          Length = 142000

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    tatcaagcatgatggaggag 96
             ||||||||||||||||||||
Sbjct: 72304 tatcaagcatgatggaggag 72285


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,835,081
Number of Sequences: 3902068
Number of extensions: 3835081
Number of successful extensions: 69513
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69406
Number of HSP's gapped (non-prelim): 107
length of query: 493
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 471
effective length of database: 17,147,199,772
effective search space: 8076331092612
effective search space used: 8076331092612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)