>CCNK_HUMAN (O75909) Cyclin-K|
          Length = 357

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 557 CLFVAASAEETCSNCFDMLSTALAILRFV 471
           CLF+A   EET   C D++ TA ++L  V
Sbjct: 99  CLFLAGKVEETPKKCKDIIKTARSLLNDV 127

>CARB_PSEPK (Q88DU6) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)|
           (Carbamoyl-phosphate synthetase ammonia chain)
          Length = 1073

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 273 SHVIGARTFSLIYALHELLELRQYIRQAAIPKHDRP 166
           S+V+G R   ++Y   EL EL++Y+R+A    +D P
Sbjct: 716 SYVLGGRAMEIVY---ELDELKRYLREAVQVSNDSP 748

>MTRD_METTM (P80183) Tetrahydromethanopterin S-methyltransferase subunit D (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit D)
          Length = 233

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 100 AMATHTGVAASKVLILVGAGLTGSI 174
           AMAT TGV     ++  GAGLTG I
Sbjct: 32  AMATATGVGTGTAMLAAGAGLTGLI 56

>MTRD_METTH (O27230) Tetrahydromethanopterin S-methyltransferase subunit D (EC|
           2.1.1.86) (N5-methyltetrahydromethanopterin--coenzyme M
           methyltransferase subunit D)
          Length = 233

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +1

Query: 100 AMATHTGVAASKVLILVGAGLTGSI 174
           AMAT TGV     ++  GAGLTG I
Sbjct: 32  AMATATGVGTGTAMLAAGAGLTGLI 56

>CCNK_MOUSE (O88874) Cyclin-K|
          Length = 554

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 557 CLFVAASAEETCSNCFDMLSTALAILRFV 471
           CLF+A   EET   C D++ TA ++L  V
Sbjct: 99  CLFLAGKVEETPKKCKDIIKTARSLLNDV 127

>MYO1_SCHPO (Q9Y7Z8) Myosin-1|
          Length = 1217

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 267 HGSYPSSDSAFSPRSQRFNFVKAHYHIEWQIGLRRWFIVLHTASSCSWSI 416
           H    ++DSAF+   QR NF+ ++ H E +   +  FIV H A   ++SI
Sbjct: 496 HADSAAADSAFA---QRLNFLSSNPHFEQR---QNQFIVKHYAGDVTYSI 539

>VIT_BOMMO (Q27309) Vitellogenin precursor [Contains: Vitellin light chain|
           (VL); Vitellin light chain rare isoform; Vitellin heavy
           chain rare isoform; Vitellin heavy chain (VH)]
          Length = 1782

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +3

Query: 171 DRASEWPPVGCIGGAPGAHEGRKSRRRFERL*HGSYPSSDSAFSPRSQRFNFVKAHYH 344
           D  +EWP  G +  A        +++  +      Y SS S+ S  S  FNF + H H
Sbjct: 304 DSGAEWPRAGAMRPAQSILYSLSTKQMTKH-----YESSSSSSSSESHEFNFPEQHEH 356

>Y4XP_RHISN (P55708) Putative cysteine synthase (EC 2.5.1.47) (O-acetylserine|
           sulfhydrylase) (O-acetylserine (Thiol)-lyase) (CSase)
          Length = 336

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 85  RRKGMAMATHTGVAASKVLILVGAG-LTGSIV 177
           RRKG+ +   TG A  K L  +GAG LTG++V
Sbjct: 260 RRKGLLVGGSTGGAIYKALEFIGAGKLTGTVV 291

>DXR_CORGL (Q8NP10) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 392

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/64 (32%), Positives = 30/64 (46%)
 Frame = +1

Query: 118 GVAASKVLILVGAGLTGSIVLRNGRLSDVLAELQELMKGVNQGEGSSAYDMALIQAQIRH 297
           GV   K+LIL   G  G+  L      DV+A+  +  + V    G S  D+ + QAQ   
Sbjct: 2   GVVTKKILILGSTGSIGTQAL------DVIADNSDKFEVVGIAAGGSQPDLVISQAQQLG 55

Query: 298 LAQE 309
           LA +
Sbjct: 56  LAAD 59

>VTFP_BPT7 (P03748) Tail fiber protein|
          Length = 553

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 259 AYDMALIQAQIRHLAQEVRDLT 324
           AYD+ + Q Q  H+A+E RDLT
Sbjct: 96  AYDLNVAQIQTMHVAEEARDLT 117

>VTFP_BPT3 (P10308) Tail fiber protein|
          Length = 557

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 259 AYDMALIQAQIRHLAQEVRDLT 324
           AYD+ + Q Q  H+A+E RDLT
Sbjct: 96  AYDLNVAQIQTMHVAEEARDLT 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,420,128
Number of Sequences: 219361
Number of extensions: 1416879
Number of successful extensions: 4317
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4316
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)