ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2i05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 246 5e-62
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 246 5e-62
3emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb... 246 5e-62
4emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial se... 246 5e-62
5dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
6gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded p... 90 7e-15
7dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome 78 3e-11
8gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome 72 2e-09
9dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 64 4e-07
10gb|U16134.1|SSU16134 Synechococcus sp. Clp protease putative reg... 64 4e-07
11gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 64 4e-07
12gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete se... 62 2e-06
13ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPa... 58 3e-05
14ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predic... 58 3e-05
15emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, B... 58 3e-05
16gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, c... 58 3e-05
17dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
18dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds 58 3e-05
19emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4,... 58 3e-05
20dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone... 58 3e-05
21gb|CP000097.1| Synechococcus sp. CC9902, complete genome 56 1e-04
22gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, c... 56 1e-04
23emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA 54 4e-04
24dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 54 4e-04
25gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 50 0.006
26emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BA... 50 0.006
27gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co... 48 0.025
28gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subuni... 48 0.025
29ref|NM_114414.1| Arabidopsis thaliana ATP binding / protein bind... 46 0.099
30gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 46 0.099
31gb|AF041468.1| Guillardia theta complete plastid genome 46 0.099
32gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ... 44 0.39
33ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase... 42 1.5
34gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromo... 42 1.5
35gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosom... 42 1.5
36emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 m... 42 1.5
37emb|AL954255.1| Pan troglodytes chromosome 22 clone PTB-044C19 m... 42 1.5
38gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, compl... 42 1.5
39gb|AC099561.2| Homo sapiens chromosome 1 clone RP11-193H16, comp... 42 1.5
40gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromo... 42 1.5
41gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene enco... 42 1.5
42emb|BX833282.1|CNS09YXM Arabidopsis thaliana Full-length cDNA Co... 42 1.5
43dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.5
44emb|AL732368.12| Mouse DNA sequence from clone RP23-417N12 on ch... 42 1.5
45gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome... 40 6.1
46gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, com... 40 6.1
47gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosom... 40 6.1
48gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, comple... 40 6.1
49ref|XM_537382.2| PREDICTED: Canis familiaris similar to Proteaso... 40 6.1
50ref|XM_855106.1| PREDICTED: Canis familiaris similar to Proteaso... 40 6.1
51ref|XM_855030.1| PREDICTED: Canis familiaris similar to Proteaso... 40 6.1
52ref|XM_854997.1| PREDICTED: Canis familiaris similar to Proteaso... 40 6.1
53emb|AL928709.36| Zebrafish DNA sequence from clone CH211-127L5 i... 40 6.1
54emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on ch... 40 6.1
55emb|AL050325.20|HSJ824F16 Human DNA sequence from clone RP5-824F... 40 6.1
56gb|BC035974.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypepti... 40 6.1
57gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome... 40 6.1
58gb|AC161408.4| Mus musculus chromosome 1, clone RP24-329G10, com... 40 6.1
59ref|NM_001358.2| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypep... 40 6.1
60emb|CR618033.1| full-length cDNA clone CS0DI020YF01 of Placenta ... 40 6.1
61gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, comp... 40 6.1
62emb|BX908736.10| Zebrafish DNA sequence from clone CH211-229C8 i... 40 6.1
63emb|BX323835.9| Zebrafish DNA sequence from clone DKEYP-22F6 in ... 40 6.1
64gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, comp... 40 6.1
65gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3... 40 6.1
66gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, comple... 40 6.1
67gb|AF279891.1| Homo sapiens dead box protein 15 mRNA, complete cds 40 6.1
68dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.1
69emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chro... 40 6.1
70emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, ... 40 6.1
71emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 i... 40 6.1
72emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-4... 40 6.1
73dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP... 40 6.1
74gb|AC003691.1|AC003691 Human Chromosome 11q23 PAC clone pDJ254e1... 40 6.1
75gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complet... 40 6.1
76dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clo... 40 6.1
77dbj|AB001636.1| Homo sapiens mRNA for ATP-dependent RNA helicase... 40 6.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  246 bits (124), Expect = 5e-62
 Identities = 336/406 (82%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                           
Query: 48      tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 107
               ||||| ||||||||||||| ||| |  ||| ||||||||| || |  |||||||||||||
Sbjct: 7099820 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 7099761

                                                                           
Query: 108     gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 167
               |||||  | | ||||  |  |||||||||||||| || |||||| |||||||||||||||
Sbjct: 7099760 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 7099701

                                                                           
Query: 168     caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 227
               | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| ||||
Sbjct: 7099700 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7099641

                                                                           
Query: 228     gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 287
               |||||||||  | ||      |||||||||| || || ||||||||||||||||   | |
Sbjct: 7099640 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7099584

                                                                           
Query: 288     gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 347
               |||||||||||||||||   |||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 7099583 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7099524

                                                                           
Query: 348     ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 407
               |||| ||||| |||||||| || ||||| || || || ||  |||| |||||||||||||
Sbjct: 7099523 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7099464

                                                             
Query: 408     gaactgagcaagttctattgggtctggttggagaaggcactggtat 453
               | ||||||||| |||| ||||||||| |||||||||| ||||||||
Sbjct: 7099463 gtactgagcaaattctcttgggtctgattggagaagggactggtat 7099418
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  246 bits (124), Expect = 5e-62
 Identities = 336/406 (82%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                           
Query: 48      tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 107
               ||||| ||||||||||||| ||| |  ||| ||||||||| || |  |||||||||||||
Sbjct: 7099699 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 7099640

                                                                           
Query: 108     gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 167
               |||||  | | ||||  |  |||||||||||||| || |||||| |||||||||||||||
Sbjct: 7099639 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 7099580

                                                                           
Query: 168     caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 227
               | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| ||||
Sbjct: 7099579 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7099520

                                                                           
Query: 228     gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 287
               |||||||||  | ||      |||||||||| || || ||||||||||||||||   | |
Sbjct: 7099519 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7099463

                                                                           
Query: 288     gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 347
               |||||||||||||||||   |||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 7099462 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7099403

                                                                           
Query: 348     ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 407
               |||| ||||| |||||||| || ||||| || || || ||  |||| |||||||||||||
Sbjct: 7099402 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7099343

                                                             
Query: 408     gaactgagcaagttctattgggtctggttggagaaggcactggtat 453
               | ||||||||| |||| ||||||||| |||||||||| ||||||||
Sbjct: 7099342 gtactgagcaaattctcttgggtctgattggagaagggactggtat 7099297
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>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 68450

 Score =  246 bits (124), Expect = 5e-62
 Identities = 336/406 (82%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                         
Query: 48    tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 107
             ||||| ||||||||||||| ||| |  ||| ||||||||| || |  |||||||||||||
Sbjct: 67506 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 67447

                                                                         
Query: 108   gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 167
             |||||  | | ||||  |  |||||||||||||| || |||||| |||||||||||||||
Sbjct: 67446 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 67387

                                                                         
Query: 168   caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 227
             | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| ||||
Sbjct: 67386 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 67327

                                                                         
Query: 228   gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 287
             |||||||||  | ||      |||||||||| || || ||||||||||||||||   | |
Sbjct: 67326 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 67270

                                                                         
Query: 288   gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 347
             |||||||||||||||||   |||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 67269 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 67210

                                                                         
Query: 348   ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 407
             |||| ||||| |||||||| || ||||| || || || ||  |||| |||||||||||||
Sbjct: 67209 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 67150

                                                           
Query: 408   gaactgagcaagttctattgggtctggttggagaaggcactggtat 453
             | ||||||||| |||| ||||||||| |||||||||| ||||||||
Sbjct: 67149 gtactgagcaaattctcttgggtctgattggagaagggactggtat 67104
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>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of
            cultivar Nipponbare of ssp. japonica of Oryza sativa
            (rice), complete sequence
          Length = 45687

 Score =  246 bits (124), Expect = 5e-62
 Identities = 336/406 (82%), Gaps = 3/406 (0%)
 Strand = Plus / Minus

                                                                        
Query: 48   tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 107
            ||||| ||||||||||||| ||| |  ||| ||||||||| || |  |||||||||||||
Sbjct: 8120 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 8061

                                                                        
Query: 108  gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 167
            |||||  | | ||||  |  |||||||||||||| || |||||| |||||||||||||||
Sbjct: 8060 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 8001

                                                                        
Query: 168  caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 227
            | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| ||||
Sbjct: 8000 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7941

                                                                        
Query: 228  gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 287
            |||||||||  | ||      |||||||||| || || ||||||||||||||||   | |
Sbjct: 7940 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7884

                                                                        
Query: 288  gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 347
            |||||||||||||||||   |||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 7883 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7824

                                                                        
Query: 348  ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 407
            |||| ||||| |||||||| || ||||| || || || ||  |||| |||||||||||||
Sbjct: 7823 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7764

                                                          
Query: 408  gaactgagcaagttctattgggtctggttggagaaggcactggtat 453
            | ||||||||| |||| ||||||||| |||||||||| ||||||||
Sbjct: 7763 gtactgagcaaattctcttgggtctgattggagaagggactggtat 7718
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>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full
           insert sequence
          Length = 3088

 Score =  238 bits (120), Expect = 1e-59
 Identities = 336/406 (82%), Gaps = 4/406 (0%)
 Strand = Plus / Plus

                                                                       
Query: 48  tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 107
           ||||| ||||||||||||| ||| |  ||| ||||||||| || |  |||||||||||||
Sbjct: 120 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 179

                                                                       
Query: 108 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 167
           |||||  | | ||||  |  |||||||||||||| || |||||| |||||||||||||||
Sbjct: 180 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 239

                                                                       
Query: 168 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 227
           | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| ||||
Sbjct: 240 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 299

                                                                       
Query: 228 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 287
           |||||||||  | ||      |||||||||| || || ||||||||||||||||   | |
Sbjct: 300 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 356

                                                                       
Query: 288 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 347
           ||||||||||||||||| |  ||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 357 gacggggaaggcgtgct-cgcttgtaaccagatcgatgtttgagaggttcactgagaaag 415

                                                                       
Query: 348 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 407
           |||| ||||| |||||||| || ||||| || || || ||  |||| |||||||||||||
Sbjct: 416 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 475

                                                         
Query: 408 gaactgagcaagttctattgggtctggttggagaaggcactggtat 453
           | ||||||||| |||| ||||||||| |||||||||| ||||||||
Sbjct: 476 gtactgagcaaattctcttgggtctgattggagaagggactggtat 521
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>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast
           protein mRNA, complete cds
          Length = 3239

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 96/113 (84%)
 Strand = Plus / Plus

                                                                       
Query: 341 gagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaac 400
           |||||||| || || || |||||||| || || |||||||| ||||| || |||||||| 
Sbjct: 340 gagaaagcaatcaaagtgataatgctagctcaggaggaagcaagacgtcttggtcacaat 399

                                                                
Query: 401 tttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtat 453
           |||||||||||||||||  |||| ||||||||  |||| ||||||||||||||
Sbjct: 400 tttgtcggaactgagcagattcttttgggtcttattggtgaaggcactggtat 452
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>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                          
Query: 335    tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
              |||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||| | || 
Sbjct: 122308 tttactgaaaaagctataaaagtcataatgctagcacaggaagaagctagacgcttagga 122367

                                     
Query: 395    cacaactttgtcggaactgagca 417
              || || |||||||||||||||||
Sbjct: 122368 cataattttgtcggaactgagca 122390
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>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                          
Query: 335    tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
              |||||||| ||||||||||| ||||| ||||| |||||||| ||||| |||||| | || 
Sbjct: 120962 tttactgaaaaagctataaaagtcatcatgctagcacaagaagaagctagacgcttaggc 121021

                                      
Query: 395    cacaactttgtcggaactgagcaa 418
              || |||||||| || |||||||||
Sbjct: 121022 cataactttgttggtactgagcaa 121045
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                           
Query: 335     tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
               ||||| |||||||| || |||||||| ||||| || || ||||||||| | |||||||||
Sbjct: 1362460 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 1362519

                                       
Query: 395     cacaactttgtcggaactgagcaa 418
               || ||||| ||||| || ||||||
Sbjct: 1362520 cataacttcgtcggcaccgagcaa 1362543
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>gb|U16134.1|SSU16134 Synechococcus sp. Clp protease putative regulatory subunit (clpC)
           gene, complete cds
          Length = 2935

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Plus

                                                                       
Query: 335 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
           ||||| |||||||| || |||||||| ||||| || || ||||||||| | |||||||||
Sbjct: 356 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 415

                                   
Query: 395 cacaactttgtcggaactgagcaa 418
           || ||||| ||||| || ||||||
Sbjct: 416 cataacttcgtcggcaccgagcaa 439
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 71/84 (84%)
 Strand = Plus / Minus

                                                                          
Query: 335    tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
              ||||| |||||||| || |||||||| ||||| || || ||||||||| | |||||||||
Sbjct: 258423 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 258364

                                      
Query: 395    cacaactttgtcggaactgagcaa 418
              || ||||| ||||| || ||||||
Sbjct: 258363 cataacttcgtcggcaccgagcaa 258340
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>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence
          Length = 129513

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 97/119 (81%)
 Strand = Plus / Minus

                                                                         
Query: 335   tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
             ||||| ||||||||||| || || || ||| | || || |||||||| || || ||||| 
Sbjct: 40053 tttacggagaaagctatcaaagttattatgttggctcaggaggaagcaaggcggctggga 39994

                                                                        
Query: 395   cacaactttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtat 453
             ||||| ||||| |||||||| ||  |||||||||||||  |||| ||||| ||||||||
Sbjct: 39993 cacaattttgttggaactgaacagattctattgggtcttattggtgaaggaactggtat 39935
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>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding /
           nuclease/ nucleoside-triphosphatase/ nucleotide binding
           / protein binding AT3G48870 (ATCLPC) mRNA, complete cds
          Length = 3130

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 310 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 369
           |||| ||| ||| ||||| ||| | ||||| |||||||| || ||||||||||||||  |
Sbjct: 433 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 492

                                                                       
Query: 370 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 429
            |||||||||||  |  | || || || |||||||| || ||||||||| | || |||||
Sbjct: 493 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 552

                                
Query: 430 tctggttggagaaggcactgg 450
           |||  |||||||||| |||||
Sbjct: 553 tctaattggagaagggactgg 573
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>ref|XM_472335.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2667

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 353 aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 412
           ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || 
Sbjct: 199 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 258

                            
Query: 413 gagcaagttctattggg 429
           |||||| ||||| ||||
Sbjct: 259 gagcaaattctactggg 275
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>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18
          Length = 82912

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Minus

                                                                         
Query: 310   tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 369
             |||| ||| ||| ||||| ||| | ||||| |||||||| || ||||||||||||||  |
Sbjct: 74121 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 74062

                                                                         
Query: 370   acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 429
              |||||||||||  |  | || || || |||||||| || ||||||||| | || |||||
Sbjct: 74061 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 74002

                                  
Query: 430   tctggttggagaaggcactgg 450
             |||  |||||||||| |||||
Sbjct: 74001 tctaattggagaagggactgg 73981
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>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds
          Length = 3105

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 310 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 369
           |||| ||| ||| ||||| ||| | ||||| |||||||| || ||||||||||||||  |
Sbjct: 433 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 492

                                                                       
Query: 370 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 429
            |||||||||||  |  | || || || |||||||| || ||||||||| | || |||||
Sbjct: 493 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 552

                                
Query: 430 tctggttggagaaggcactgg 450
           |||  |||||||||| |||||
Sbjct: 553 tctaattggagaagggactgg 573
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                            
Query: 353      aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 412
                ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || 
Sbjct: 19615390 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 19615331

                                 
Query: 413      gagcaagttctattggg 429
                |||||| ||||| ||||
Sbjct: 19615330 gagcaaattctactggg 19615314
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>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds
          Length = 3090

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 113/141 (80%)
 Strand = Plus / Plus

                                                                       
Query: 310 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 369
           |||| ||| ||| ||||| ||| | ||||| |||||||| || ||||||||||||||  |
Sbjct: 418 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 477

                                                                       
Query: 370 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 429
            |||||||||||  |  | || || || |||||||| || ||||||||| | || |||||
Sbjct: 478 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 537

                                
Query: 430 tctggttggagaaggcactgg 450
           |||  |||||||||| |||||
Sbjct: 538 tctaattggagaagggactgg 558
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>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07,
             complete sequence
          Length = 166410

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                         
Query: 353   aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 412
             ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || 
Sbjct: 66116 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 66057

                              
Query: 413   gagcaagttctattggg 429
             |||||| ||||| ||||
Sbjct: 66056 gagcaaattctactggg 66040
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>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175,
             complete sequence
          Length = 108582

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 92/113 (81%)
 Strand = Plus / Minus

                                                                         
Query: 341   gagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaac 400
             |||||||| || ||||| || |||||  | || ||||| |||||||| |||||||| || 
Sbjct: 68572 gagaaagcaatcaaggttattatgctttcccaggaggaggcgagacggctgggtcataat 68513

                                                                  
Query: 401   tttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtat 453
             ||||| ||||| || ||  | || |||||||| ||||| ||||||||||||||
Sbjct: 68512 tttgttggaacagaacagatcctgttgggtcttgttggtgaaggcactggtat 68460
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 82/100 (82%)
 Strand = Plus / Minus

                                                                           
Query: 319     agcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagagga 378
               ||||||||||||  | ||||| ||||| || || || || || ||||| || ||||||||
Sbjct: 1355512 agcgatgttcgaacggtttaccgagaaggccatcaaagtgatcatgctggcccaagagga 1355453

                                                       
Query: 379     agcgagacgcctgggtcacaactttgtcggaactgagcaa 418
               |||  || | || ||||||||||| |||||||||||||||
Sbjct: 1355452 agctcgaaggcttggtcacaacttcgtcggaactgagcaa 1355413
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>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds
          Length = 5429

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 338  actgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcac 397
            ||||||||||| ||||| ||||| ||||| || ||||| || || ||||| || ||||||
Sbjct: 1078 actgagaaagcaataaaagtcattatgcttgcccaagaagaggccagacgactaggtcac 1137

                    
Query: 398  aactttgt 405
            ||||||||
Sbjct: 1138 aactttgt 1145
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>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA
          Length = 2837

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 323 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagc 381
           ||||| ||||| ||||||||||||||||| ||||| || ||||| || || ||||||||
Sbjct: 123 atgtttgagaggtttactgagaaagctatcaaggttattatgcttgctcaggaggaagc 181
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 78/95 (82%)
 Strand = Plus / Plus

                                                                           
Query: 356     gtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaactgag 415
               ||||| |||||||| || ||||||||  | |||||||| ||||| || || |||||||||
Sbjct: 2344441 gtcattatgctcgctcaggaggaagcacgtcgcctgggacacaatttcgtaggaactgag 2344500

                                                  
Query: 416     caagttctattgggtctggttggagaaggcactgg 450
               ||| ||||  ||||| || | |||||||| |||||
Sbjct: 2344501 caaattctcctgggtttgatgggagaaggaactgg 2344535
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                           
Query: 362     atgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagtt 421
               |||||||| || ||||||||  | |||||||| ||||| || || |||||||||||| ||
Sbjct: 5457309 atgctcgctcaggaggaagcacgtcgcctgggacacaatttcgtaggaactgagcaaatt 5457250

                                            
Query: 422     ctattgggtctggttggagaaggcactgg 450
               ||  ||||| || | |||||||| |||||
Sbjct: 5457249 ctcctgggtttgatgggagaaggaactgg 5457221
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>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21
          Length = 110980

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 321   cgatgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaag 380
             ||||||| ||| | |||||||||||||| || |||||||||| | | || ||||||||||
Sbjct: 15633 cgatgtttgagcgttttactgagaaagcaattaaggtcataacgttggctcaagaggaag 15692

              
Query: 381   c 381
             |
Sbjct: 15693 c 15693
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>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                         
Query: 335   tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
             ||||| |||||||| || ||||| || ||||| || |||||||||||  || |  |||||
Sbjct: 33478 tttacagagaaagcaatcaaggttatcatgcttgcccaagaggaagctcgaagattgggt 33537

                                     
Query: 395   cacaactttgtcggaactgagcaa 418
             ||||| ||||| || |||||||||
Sbjct: 33538 cacaattttgttggtactgagcaa 33561
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>gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene,
           complete cds; chloroplast
          Length = 2454

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 335 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 394
           ||||| |||||||| || ||||| || ||||| || |||||||||||  || |  |||||
Sbjct: 13  tttacagagaaagcaatcaaggttatcatgcttgcccaagaggaagctcgaagattgggt 72

                                   
Query: 395 cacaactttgtcggaactgagcaa 418
           ||||| ||||| || |||||||||
Sbjct: 73  cacaattttgttggtactgagcaa 96
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>ref|NM_114414.1| Arabidopsis thaliana ATP binding / protein binding AT3G45450 mRNA,
           complete cds
          Length = 1026

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 335 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagc 381
           |||||||||||||| || |||||||||| | | || |||||||||||
Sbjct: 13  tttactgagaaagcaattaaggtcataacgttggctcaagaggaagc 59
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                      
Query: 347     gctataaaggtcataatgctcgcacaagaggaagcgaga 385
               |||||||| ||||| ||||| || |||||||||||||||
Sbjct: 1013800 gctataaaagtcattatgcttgcccaagaggaagcgaga 1013762
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>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 335 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagc 381
           ||||| |||||||||||||| || || |||||||| ||||| |||||
Sbjct: 741 tttacagagaaagctataaaagttattatgctcgctcaagaagaagc 787
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>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 344   aaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaacttt 403
             ||||| ||||| || || ||||| || ||||| ||||| |||||| | ||||||||||||
Sbjct: 55295 aaagcaataaaagttatcatgcttgctcaagaagaagctagacgcttaggtcacaacttt 55354

               
Query: 404   gt 405
             ||
Sbjct: 55355 gt 55356
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>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC)
           mRNA, complete cds
          Length = 3183

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
           ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| 
Sbjct: 435 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 494

                                        
Query: 383 agacgcctgggtcacaactttgtcggaac 411
           ||| | || || ||||| ||||| |||||
Sbjct: 495 agaagactaggccacaattttgtgggaac 523
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>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete
              sequence
          Length = 191785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 3      ttctttctccctctctcggtctctc 27
              ||||||||||||||||| |||||||
Sbjct: 122018 ttctttctccctctctctgtctctc 121994
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>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete sequence
          Length = 194665

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 3      ttctttctccctctctcggtctctc 27
              |||||||||||||||||| ||||||
Sbjct: 127093 ttctttctccctctctcgctctctc 127069
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>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete
             sequence
          Length = 180777

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 3     ttctttctccctctctcggtctctc 27
             ||||||||||||||||| |||||||
Sbjct: 51090 ttctttctccctctctctgtctctc 51066
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>emb|AL954255.1| Pan troglodytes chromosome 22 clone PTB-044C19 map 22q22.3, complete
              sequence
          Length = 177268

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 3      ttctttctccctctctcggtctctc 27
              ||||||||||||||||| |||||||
Sbjct: 149269 ttctttctccctctctctgtctctc 149245
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>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds
          Length = 3125

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
           ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| 
Sbjct: 410 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 469

                                        
Query: 383 agacgcctgggtcacaactttgtcggaac 411
           ||| | || || ||||| ||||| |||||
Sbjct: 470 agaagactaggccacaattttgtgggaac 498
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>gb|AC099561.2| Homo sapiens chromosome 1 clone RP11-193H16, complete sequence
          Length = 163453

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     ttctttctccctctctcggtctctc 27
             ||||||||||||||||| |||||||
Sbjct: 25565 ttctttctccctctctctgtctctc 25589
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>gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromosome 5, complete
             sequence
          Length = 147307

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 3     ttctttctccctctctcggtctctc 27
             ||||||||||||||||| |||||||
Sbjct: 46075 ttctttctccctctctctgtctctc 46051
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>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast
           protein, complete cds
          Length = 2912

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
           ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| 
Sbjct: 383 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 442

                                        
Query: 383 agacgcctgggtcacaactttgtcggaac 411
           ||| | || || ||||| ||||| |||||
Sbjct: 443 agaagactaggccacaattttgtgggaac 471
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>emb|BX833282.1|CNS09YXM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZE05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
           ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| 
Sbjct: 386 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 445

                                        
Query: 383 agacgcctgggtcacaactttgtcggaac 411
           ||| | || || ||||| ||||| |||||
Sbjct: 446 agaagactaggccacaattttgtgggaac 474
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>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7
          Length = 68726

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 72/89 (80%)
 Strand = Plus / Minus

                                                                         
Query: 323   atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
             ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| 
Sbjct: 22010 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 21951

                                          
Query: 383   agacgcctgggtcacaactttgtcggaac 411
             ||| | || || ||||| ||||| |||||
Sbjct: 21950 agaagactaggccacaattttgtgggaac 21922
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>emb|AL732368.12| Mouse DNA sequence from clone RP23-417N12 on chromosome X, complete
              sequence
          Length = 177727

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 3      ttctttctccctctctcggtctctc 27
              ||||||||||||||||| |||||||
Sbjct: 130864 ttctttctccctctctctgtctctc 130888
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>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence
          Length = 196946

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||||||||||| |||||||
Sbjct: 92791 tctttctccctctctctgtctctc 92814
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>gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, complete sequence
          Length = 181313

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tctccctctctcggtctctc 27
             ||||||||||||||||||||
Sbjct: 39852 tctccctctctcggtctctc 39871
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>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence
          Length = 175604

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 4      tctttctccctctctcggtctctc 27
              |||||||||||||||| |||||||
Sbjct: 117953 tctttctccctctctctgtctctc 117976
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>gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, complete sequence
          Length = 171128

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 3      ttctttctccctctctcggtctct 26
              |||||||||||||||||| |||||
Sbjct: 108172 ttctttctccctctctcgctctct 108195
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>ref|XM_537382.2| PREDICTED: Canis familiaris similar to Proteasome activator complex
           subunit 2 (Proteasome activator 28-beta subunit)
           (PA28beta) (PA28b) (Activator of multicatalytic protease
           subunit 2) (11S regulator complex beta subunit)
           (REG-beta), transcript variant 1 (LOC480258), mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 caggaggactccctcaatgt 164
           ||||||||||||||||||||
Sbjct: 300 caggaggactccctcaatgt 319
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>ref|XM_855106.1| PREDICTED: Canis familiaris similar to Proteasome activator complex
           subunit 2 (Proteasome activator 28-beta subunit)
           (PA28beta) (PA28b) (Activator of multicatalytic protease
           subunit 2) (11S regulator complex beta subunit)
           (REG-beta), transcript variant 5 (LOC480258), mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 caggaggactccctcaatgt 164
           ||||||||||||||||||||
Sbjct: 132 caggaggactccctcaatgt 151
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>ref|XM_855030.1| PREDICTED: Canis familiaris similar to Proteasome activator complex
           subunit 2 (Proteasome activator 28-beta subunit)
           (PA28beta) (PA28b) (Activator of multicatalytic protease
           subunit 2) (11S regulator complex beta subunit)
           (REG-beta), transcript variant 3 (LOC480258), mRNA
          Length = 738

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 caggaggactccctcaatgt 164
           ||||||||||||||||||||
Sbjct: 126 caggaggactccctcaatgt 145
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>ref|XM_854997.1| PREDICTED: Canis familiaris similar to Proteasome activator complex
           subunit 2 (Proteasome activator 28-beta subunit)
           (PA28beta) (PA28b) (Activator of multicatalytic protease
           subunit 2) (11S regulator complex beta subunit)
           (REG-beta), transcript variant 2 (LOC480258), mRNA
          Length = 767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 caggaggactccctcaatgt 164
           ||||||||||||||||||||
Sbjct: 189 caggaggactccctcaatgt 208
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>emb|AL928709.36| Zebrafish DNA sequence from clone CH211-127L5 in linkage group 17,
             complete sequence
          Length = 166456

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tctccctctctcggtctctc 27
             ||||||||||||||||||||
Sbjct: 95954 tctccctctctcggtctctc 95973
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>emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on chromosome 9p13.3-21.3
              Contains a CMT1A duplicated region transcript 15 (CDRT15)
              pseudogene, a pseudogene similar to part of solute carrier
              family 4 (anion exchanger), member 1, adaptor protein
              (SLC4A1AP), a novel pseudogene and a RNA binding motif
              protein, X chromosome (RBMX) (HNRPG) pseudogene, complete
              sequence
          Length = 163677

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 3      ttctttctccctctctcggtctct 26
              ||||||||||||||||| ||||||
Sbjct: 100675 ttctttctccctctctctgtctct 100652
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>emb|AL050325.20|HSJ824F16 Human DNA sequence from clone RP5-824F16 on chromosome 20 Contains the
             5' end of the ANGPT4 gene for angiopoietin 4, part of the
             gene for a novel protein similar to mouse thrombospondin
             type 1 domain protein R-spondin and a CpG island, complete
             sequence
          Length = 139330

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||||||||||| |||||||
Sbjct: 16686 tctttctccctctctctgtctctc 16663
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>gb|BC035974.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15, mRNA (cDNA
           clone MGC:32617 IMAGE:4806964), complete cds
          Length = 3018

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ttctttctccctctctcggtctct 26
           |||||||||||||||||| |||||
Sbjct: 323 ttctttctccctctctcgctctct 300
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>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence
          Length = 182898

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     tctccctctctcggtctctc 27
             ||||||||||||||||||||
Sbjct: 59095 tctccctctctcggtctctc 59076
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>gb|AC161408.4| Mus musculus chromosome 1, clone RP24-329G10, complete sequence
          Length = 154449

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      tctccctctctcggtctctc 27
              ||||||||||||||||||||
Sbjct: 126808 tctccctctctcggtctctc 126827
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>ref|NM_001358.2| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15 (DHX15),
           mRNA
          Length = 3019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ttctttctccctctctcggtctct 26
           |||||||||||||||||| |||||
Sbjct: 336 ttctttctccctctctcgctctct 313
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>emb|CR618033.1| full-length cDNA clone CS0DI020YF01 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 caggaggactccctcaatgt 164
           ||||||||||||||||||||
Sbjct: 823 caggaggactccctcaatgt 842
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>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence
          Length = 168708

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 4    tctttctccctctctcggtctctc 27
            |||||||||||||||| |||||||
Sbjct: 5284 tctttctccctctctctgtctctc 5261
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>emb|BX908736.10| Zebrafish DNA sequence from clone CH211-229C8 in linkage group 18,
             complete sequence
          Length = 159047

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   ctcaatgttggcaatgtcattaaa 180
             |||||||||||||||||| |||||
Sbjct: 40765 ctcaatgttggcaatgtctttaaa 40742
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>emb|BX323835.9| Zebrafish DNA sequence from clone DKEYP-22F6 in linkage group 14,
             complete sequence
          Length = 172378

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||| |||||||||||||||
Sbjct: 41841 tctttctctctctctcggtctctc 41818
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>gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, complete sequence
          Length = 126746

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 4      tctttctccctctctcggtctctc 27
              |||||||||||||||| |||||||
Sbjct: 108729 tctttctccctctctctgtctctc 108706
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>gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3, complete sequence
          Length = 160770

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||||||||||| |||||||
Sbjct: 26012 tctttctccctctctctgtctctc 26035
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>gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, complete sequence
          Length = 154891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ctccctctctcggtctctca 28
             ||||||||||||||||||||
Sbjct: 91377 ctccctctctcggtctctca 91396
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>gb|AF279891.1| Homo sapiens dead box protein 15 mRNA, complete cds
          Length = 2441

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ttctttctccctctctcggtctct 26
           |||||||||||||||||| |||||
Sbjct: 168 ttctttctccctctctcgctctct 145
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 77/96 (80%)
 Strand = Plus / Plus

                                                                           
Query: 323     atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 382
               ||||| || |||||||| |||||||| || || || || ||| | || || |||||||| 
Sbjct: 2215509 atgtttgaaagatttaccgagaaagcaatcaaagtgatcatgttggcccaggaggaagcc 2215568

                                                   
Query: 383     agacgcctgggtcacaactttgtcggaactgagcaa 418
                | |||||||| ||||||||||| || || ||||||
Sbjct: 2215569 cgtcgcctgggacacaactttgtgggtaccgagcaa 2215604
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>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete
             sequence
          Length = 97756

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||||||||||| |||||||
Sbjct: 14190 tctttctccctctctctgtctctc 14213
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>emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, complete sequence
          Length = 168257

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     ttctccctctctcggtctctcatc 30
             ||||||||||||| ||||||||||
Sbjct: 93273 ttctccctctctctgtctctcatc 93250
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>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16,
             complete sequence
          Length = 195410

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     ttctccctctctcggtctctcatc 30
             ||||||||||||| ||||||||||
Sbjct: 56819 ttctccctctctctgtctctcatc 56842
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>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 194815

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   caggaggactccctcaatgt 164
             ||||||||||||||||||||
Sbjct: 64564 caggaggactccctcaatgt 64583
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>dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-660I20, complete
             sequence
          Length = 171287

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   aaagctataaaggtcataat 363
             ||||||||||||||||||||
Sbjct: 10908 aaagctataaaggtcataat 10889
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>gb|AC003691.1|AC003691 Human Chromosome 11q23 PAC clone pDJ254e13, complete sequence
          Length = 65020

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     tctttctccctctctcggtctctc 27
             |||||||||||||||| |||||||
Sbjct: 33190 tctttctccctctctctgtctctc 33167
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>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence
          Length = 218283

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 4      tctttctccctctctcggtctctc 27
              |||||||||||||||| |||||||
Sbjct: 125697 tctttctccctctctctgtctctc 125720
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>dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320,
              anti-oncogene region, section 3/3
          Length = 254437

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    aaagctataaaggtcataat 363
              ||||||||||||||||||||
Sbjct: 219225 aaagctataaaggtcataat 219206
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>dbj|AB001636.1| Homo sapiens mRNA for ATP-dependent RNA helicase #46, complete cds
          Length = 3028

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 3   ttctttctccctctctcggtctct 26
           |||||||||||||||||| |||||
Sbjct: 329 ttctttctccctctctcgctctct 306


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,171,101
Number of Sequences: 3902068
Number of extensions: 3171101
Number of successful extensions: 62721
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 62465
Number of HSP's gapped (non-prelim): 252
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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