Clone Name	baal2g24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	825	0.0
2	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	825	0.0
3	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	825	0.0
4	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	825	0.0
5	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	823	0.0
6	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	823	0.0
7	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	823	0.0
8	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	823	0.0
9	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	823	0.0
10	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	823	0.0
11	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	823	0.0
12	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	823	0.0
13	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	823	0.0
14	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	823	0.0
15	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	823	0.0
16	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	823	0.0
17	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	823	0.0
18	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	823	0.0
19	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	823	0.0
20	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	823	0.0
21	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	823	0.0
22	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	823	0.0
23	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	823	0.0
24	dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	823	0.0
25	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	823	0.0
26	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	823	0.0
27	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	815	0.0
28	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	815	0.0
29	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	815	0.0
30	dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon...	815	0.0
31	dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	815	0.0
32	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	807	0.0
33	gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...	791	0.0
34	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	791	0.0
35	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	791	0.0
36	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	791	0.0
37	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	777	0.0
38	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	777	0.0
39	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	777	0.0
40	dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clon...	696	0.0
41	gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA...	593	e-166
42	dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
43	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	486	e-134
44	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	486	e-134
45	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	486	e-134
46	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	486	e-134
47	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	486	e-134
48	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	486	e-134
49	gb|AY582139.1| Panax ginseng chloroplast, complete genome	486	e-134
50	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	486	e-134
51	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	486	e-134
52	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	478	e-132
53	gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene,...	478	e-132
54	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	478	e-132
55	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	478	e-132
56	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	478	e-132
57	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	472	e-130
58	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	470	e-129
59	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	470	e-129
60	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	470	e-129
61	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	468	e-129
62	gb|DQ481232.1| Populus suaveolens unknown gene	462	e-127
63	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	462	e-127
64	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	454	e-124
65	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	454	e-124
66	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	454	e-124
67	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	454	e-124
68	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	454	e-124
69	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	454	e-124
70	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	454	e-124
71	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	454	e-124
72	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	454	e-124
73	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	454	e-124
74	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	454	e-124
75	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	448	e-123
76	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	448	e-123
77	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	448	e-123
78	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	446	e-122
79	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	446	e-122
80	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	446	e-122
81	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	446	e-122
82	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	446	e-122
83	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	438	e-120
84	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	424	e-115
85	gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial ...	424	e-115
86	ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothet...	420	e-114
87	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	418	e-114
88	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	381	e-102
89	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	381	e-102
90	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	371	1e-99
91	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	371	1e-99
92	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	369	6e-99
93	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	369	6e-99
94	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	361	1e-96
95	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	361	1e-96
96	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	361	1e-96
97	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	353	3e-94
98	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	349	5e-93
99	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	349	5e-93
100	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	349	5e-93
101	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	349	5e-93
102	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	347	2e-92
103	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	345	8e-92
104	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	345	8e-92
105	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	341	1e-90
106	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	341	1e-90
107	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	323	3e-85
108	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	311	1e-81
109	dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clon...	311	1e-81
110	dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clon...	307	2e-80
111	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	301	1e-78
112	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	293	3e-76
113	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	293	3e-76
114	gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA	287	2e-74
115	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	285	7e-74
116	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	281	1e-72
117	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	281	1e-72
118	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	270	4e-69
119	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	254	2e-64
120	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	254	2e-64
121	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	242	9e-61
122	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	236	6e-59
123	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	234	2e-58
124	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	230	3e-57
125	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	230	3e-57
126	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	228	1e-56
127	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	216	5e-53
128	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	216	5e-53
129	dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clon...	216	5e-53
130	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	214	2e-52
131	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	210	3e-51
132	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	208	1e-50
133	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	206	5e-50
134	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	206	5e-50
135	dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D...	206	5e-50
136	dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D...	206	5e-50
137	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	204	2e-49
138	gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str...	204	2e-49
139	dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clon...	204	2e-49
140	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	204	2e-49
141	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	200	3e-48
142	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	198	1e-47
143	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	198	1e-47
144	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	198	1e-47
145	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	196	5e-47
146	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	196	5e-47
147	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	196	5e-47
148	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	196	5e-47
149	gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome...	194	2e-46
150	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	192	7e-46
151	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	192	7e-46
152	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	192	7e-46
153	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	190	3e-45
154	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	190	3e-45
155	gb|L43500.1|RTCCPRRNL Carteria olivieri	190	3e-45
156	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	190	3e-45
157	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	190	3e-45
158	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	190	3e-45
159	emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial se...	188	1e-44
160	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	188	1e-44
161	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	186	5e-44
162	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	186	5e-44
163	emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL ge...	186	5e-44
164	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	184	2e-43
165	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	182	7e-43
166	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	182	7e-43
167	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	182	7e-43
168	emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmati...	182	7e-43
169	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	180	3e-42
170	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	180	3e-42
171	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	180	3e-42
172	emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene...	180	3e-42
173	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	180	3e-42
174	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	176	4e-41
175	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	176	4e-41
176	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	174	2e-40
177	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	174	2e-40
178	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	174	2e-40
179	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	174	2e-40
180	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	174	2e-40
181	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	172	7e-40
182	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	170	3e-39
183	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	170	3e-39
184	gb|AF041468.1| Guillardia theta complete plastid genome	170	3e-39
185	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	168	1e-38
186	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	168	1e-38
187	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	168	1e-38
188	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	167	4e-38
189	gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete se...	167	4e-38
190	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	167	4e-38
191	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	167	4e-38
192	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	167	4e-38
193	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	167	4e-38
194	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	167	4e-38
195	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	167	4e-38
196	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	167	4e-38
197	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	165	2e-37
198	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	165	2e-37
199	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	165	2e-37
200	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	165	2e-37
201	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	165	2e-37
202	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	165	2e-37
203	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	165	2e-37
204	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	165	2e-37
205	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	165	2e-37
206	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	165	2e-37
207	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	165	2e-37
208	dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D...	165	2e-37
209	dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D...	165	2e-37
210	dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic D...	165	2e-37
211	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	165	2e-37
212	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	165	2e-37
213	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	165	2e-37
214	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	161	3e-36
215	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	161	3e-36
216	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	159	1e-35
217	gb|L43540.1|DUNCPRRNL Dunaliella parva	159	1e-35
218	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	159	1e-35
219	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	159	1e-35
220	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	159	1e-35
221	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	157	4e-35
222	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	157	4e-35
223	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	157	4e-35
224	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	157	4e-35
225	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	157	4e-35
226	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	157	4e-35
227	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	157	4e-35
228	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	153	6e-34
229	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	153	6e-34
230	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	153	6e-34
231	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	153	6e-34
232	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	153	6e-34
233	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	153	6e-34
234	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	153	6e-34
235	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	153	6e-34
236	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	153	6e-34
237	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	153	6e-34
238	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	153	6e-34
239	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	153	6e-34
240	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	153	6e-34
241	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	153	6e-34
242	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	153	6e-34
243	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	153	6e-34
244	gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA	153	6e-34
245	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	151	3e-33
246	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	151	3e-33
247	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	151	3e-33
248	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	151	3e-33
249	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	151	3e-33
250	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	151	3e-33
251	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	151	3e-33
252	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	151	3e-33
253	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	151	3e-33
254	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	149	1e-32
255	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	149	1e-32
256	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	149	1e-32
257	emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,...	149	1e-32
258	emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,...	149	1e-32
259	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	147	4e-32
260	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	145	2e-31
261	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	145	2e-31
262	gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large...	143	6e-31
263	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	143	6e-31
264	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	143	6e-31
265	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	143	6e-31
266	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	143	6e-31
267	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	141	2e-30
268	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	141	2e-30
269	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	141	2e-30
270	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	139	1e-29
271	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	139	1e-29
272	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	139	1e-29
273	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	137	4e-29
274	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	137	4e-29
275	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	137	4e-29
276	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	135	1e-28
277	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	135	1e-28
278	dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	135	1e-28
279	dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clon...	135	1e-28
280	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	133	6e-28
281	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	133	6e-28
282	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	131	2e-27
283	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	131	2e-27
284	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	131	2e-27
285	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	131	2e-27
286	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	131	2e-27
287	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	131	2e-27
288	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	129	9e-27
289	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	127	4e-26
290	dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
291	dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic D...	127	4e-26
292	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	125	1e-25
293	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	125	1e-25
294	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	125	1e-25
295	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	125	1e-25
296	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	125	1e-25
297	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	125	1e-25
298	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	125	1e-25
299	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	123	6e-25
300	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	123	6e-25
301	emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gen...	123	6e-25
302	emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	123	6e-25
303	emb|X68915.1|CHCMRRNX3 Chloroplast C.moewusii rrnL gene, exon 3	123	6e-25
304	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	123	6e-25
305	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	121	2e-24
306	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	119	9e-24
307	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	117	4e-23
308	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	117	4e-23
309	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	117	4e-23
310	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	117	4e-23
311	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	117	4e-23
312	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	117	4e-23
313	dbj|AB182581.1| Mycoplasma hyorhinis gene for 23S ribosomal RNA,...	117	4e-23
314	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	117	4e-23
315	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	117	4e-23
316	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	117	4e-23
317	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	117	4e-23
318	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	115	1e-22
319	gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal ...	115	1e-22
320	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	115	1e-22
321	gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete ...	113	5e-22
322	gb|AE017263.1| Mesoplasma florum L1 complete genome	111	2e-21
323	gb|DQ319068.1| Spiroplasma kunkelii 16S ribosomal RNA gene, 16S-...	111	2e-21
324	gb|AE017308.1| Mycoplasma mobile 163K complete genome	109	9e-21
325	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	109	9e-21
326	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	109	9e-21
327	gb|AF443617.2| Mycoplasma hominis thiamine biosynthesis protein ...	109	9e-21
328	gb|AF443616.2| Mycoplasma hominis DNA-dependent RNA polymerase a...	109	9e-21
329	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	109	9e-21
330	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	105	1e-19
331	gb|AY055378.1| Mycoplasma hominis strain PG21 23S ribosomal RNA ...	101	2e-18
332	emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) com...	101	2e-18
333	gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit riboso...	101	2e-18
334	gb|AF277191.1|AF277191 Homo sapiens PNAS-133 mRNA, partial sequence	101	2e-18
335	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	101	2e-18
336	dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D...	101	2e-18
337	dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D...	101	2e-18
338	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	100	8e-18
339	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	100	8e-18
340	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	100	8e-18
341	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	100	8e-18
342	emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4,...	100	8e-18
343	emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome	98	3e-17
344	emb|X13310.1|CHEG23S Euglena gracilis chloroplast 23S ribosomal ...	98	3e-17
345	emb|X12890.1|CHEGRRNC Euglena gracilis rrnC operon containing 16...	98	3e-17
346	emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic D...	96	1e-16
347	emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic D...	96	1e-16
348	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	94	5e-16
349	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	94	5e-16
350	gb|AC150251.1| Uncultured bacterium zdt-33i5 clone zdt-33i5, com...	92	2e-15
351	dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome	92	2e-15
352	emb|X68424.1|BG23SRRN B.globisporus gene for 23S rRNA	90	8e-15
353	gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome...	88	3e-14
354	gb|DQ398104.1| Helicosporidium sp. ex Simulium jonesii plastid, ...	88	3e-14
355	gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosoma...	88	3e-14
356	gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734...	88	3e-14
357	gb|AF263557.1| Secondary endosymbiont of Bactericera cockerelli ...	88	3e-14
358	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	88	3e-14
359	emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Il...	88	3e-14
360	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	86	1e-13
361	gb|AE017245.1| Mycoplasma synoviae 53, complete genome	86	1e-13
362	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	84	5e-13
363	dbj|AB109771.1| Finegoldia magna rrnC operon, complete sequence	84	5e-13
364	dbj|AB109770.1| Finegoldia magna rrnB operon (16S rRNA, 23S rRNA...	84	5e-13
365	dbj|AB109769.1| Finegoldia magna rrnA operon (16S rRNA, 23S rRNA...	84	5e-13
366	dbj|AB109772.2| Finegoldia magna rrnD operon, complete sequence	84	5e-13
367	emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome	82	2e-12
368	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	80	8e-12
369	gb|AY957976.1| Candidatus Accumulibacter phosphatis RC31 23S rib...	80	8e-12
370	gb|AY957974.1| Candidatus Accumulibacter phosphatis RC111 23S ri...	80	8e-12
371	gb|AY957972.1| Candidatus Accumulibacter phosphatis RC102 23S ri...	80	8e-12
372	gb|AY957970.1| Candidatus Accumulibacter phosphatis RC99 23S rib...	80	8e-12
373	gb|AY957964.1| Candidatus Accumulibacter phosphatis RC26 23S rib...	80	8e-12
374	gb|AY957962.1| Uncultured beta proteobacterium RC19 23S ribosoma...	80	8e-12
375	gb|AY957960.1| Candidatus Accumulibacter phosphatis RC29 16S rib...	80	8e-12
376	gb|AY957958.1| Uncultured beta proteobacterium RC62 16S ribosoma...	80	8e-12
377	dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge...	80	8e-12
378	emb|AJ879820.1| Uncultured organism 23S rRNA gene, clone LP4-62	80	8e-12
379	dbj|AB045291.1| Clostridium perfringens rrnJ operon (16S rRNA, t...	80	8e-12
380	dbj|AB045290.1| Clostridium perfringens rrnI operon (16S rRNA, t...	80	8e-12
381	dbj|AB045289.1| Clostridium perfringens rrnH operon (16S rRNA, t...	80	8e-12
382	dbj|AB045288.1| Clostridium perfringens rrnG operon (16S rRNA, 2...	80	8e-12
383	dbj|AB045287.1| Clostridium perfringens rrnF operon (16S rRNA, 2...	80	8e-12
384	dbj|AB045286.1| Clostridium perfringens rrnE operon (16S rRNA, 2...	80	8e-12
385	dbj|AB045285.1| Clostridium perfringens rrnD operon (16S rRNA, 2...	80	8e-12
386	dbj|AB045284.1| Clostridium perfringens rrnC operon (16S rRNA, 2...	80	8e-12
387	dbj|AB045283.1| Clostridium perfringens rrnB operon (16S rRNA, 2...	80	8e-12
388	dbj|AB045282.1| Clostridium perfringens rrnA operon (16S rRNA, 2...	80	8e-12
389	gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome...	78	3e-11
390	gb|AC073393.2|AC073393 Oryza sativa (japonica cultivar-group) ch...	78	3e-11
391	gb|AY033301.1| Uncultured gamma proteobacterium MB11B11 16S ribo...	76	1e-10
392	gb|S60377.1| 23S rRNA [Leuconostoc oenos, Genomic, 2838 nt]	76	1e-10
393	gb|S43424.1| 23S ribosomal RNA [Bacillus stearothermophilus, NCD...	76	1e-10
394	gb|AF245375.1|AF245375 Planctomycete str. 658 23S ribosomal RNA ...	76	1e-10
395	dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge...	76	1e-10
396	emb|X01387.1|BSRRNA23 Bacillus stearothermophilus 23S rRNA	76	1e-10
397	gb|M94178.1|CLORDGA Clostridium botulinum type b 23S ribosomal RNA	76	1e-10
398	gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome	74	5e-10
399	emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A stra...	74	5e-10
400	emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A stra...	74	5e-10
401	emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A stra...	74	5e-10
402	emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A stra...	74	5e-10
403	gb|AY957978.1| Candidatus Accumulibacter phosphatis RC87 23S rib...	74	5e-10
404	gb|AF263560.1| Secondary endosymbiont of Calophya schini 16S rib...	74	5e-10
405	gb|AE002098.2| Neisseria meningitidis MC58, complete genome	74	5e-10
406	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	74	5e-10
407	dbj|AP004792.3| Oryza sativa (japonica cultivar-group) genomic D...	74	5e-10
408	emb|X67300.1|NM23SRRNA N.meningitidis gene for 23S rRNA	74	5e-10
409	emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp...	74	5e-10
410	gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome	74	5e-10
411	gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) m...	74	5e-10
412	gb|M94261.1|CLORDGC Clostridium botulinum type e 23S ribosomal RNA	74	5e-10
413	gb|M94259.1|CLORDGB Clostridium botulinum type b 23S ribosomal RNA	74	5e-10
414	gb|AY458647.1| Uncultured bacterium 580 clone EBAC000-36A07 geno...	72	2e-09
415	gb|AF548142.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	72	2e-09
416	gb|AF548136.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnB)...	72	2e-09
417	gb|AF548135.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnA)...	72	2e-09
418	emb|CR555306.1| Azoarcus sp. EbN1 complete genome	72	2e-09
419	gb|AY957979.1| Rhodocyclus purpureus DSM 168 16S-23S ribosomal R...	72	2e-09
420	gb|AY957968.1| Uncultured beta proteobacterium RC97 23S ribosoma...	72	2e-09
421	gb|AY957957.1| Candidatus Accumulibacter phosphatis RC50 16S rib...	72	2e-09
422	dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl...	72	2e-09
423	gb|AF129499.1|AF129499 Buchnera aphidicola natural-host Schlecht...	72	2e-09
424	dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss...	72	2e-09
425	gb|AY956802.1| Rubrobacter radiotolerans 23S ribosomal RNA gene,...	72	2e-09
426	gb|L08062.1|CLORGADG Clostridium tyrobutyricum 5S, 16S and 23S r...	72	2e-09
427	dbj|AB019250.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	2e-09
428	dbj|AB019249.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	2e-09
429	dbj|AB019248.1| Erysipelothrix tonsillarum genes for 16S rRNA, 2...	72	2e-09
430	dbj|AB019247.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	2e-09
431	gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome	70	7e-09
432	gb|AF548141.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	70	7e-09
433	gb|AF548139.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	7e-09
434	gb|AF548138.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	7e-09
435	gb|AF548137.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	7e-09
436	gb|AE014075.1| Escherichia coli CFT073, complete genome	70	7e-09
437	gb|CP000243.1| Escherichia coli UTI89, complete genome	70	7e-09
438	gb|U00096.2| Escherichia coli K-12 MG1655, complete genome	70	7e-09
439	gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8...	70	7e-09
440	gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2...	70	7e-09
441	gb|AF476102.1| Secondary endosymbiont of Cyphonococcus alpinus 1...	70	7e-09
442	dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome	70	7e-09
443	emb|AJ549515.2|ECL549515 Enterobacter cloacae partial 23S rRNA g...	70	7e-09
444	emb|AJ549514.1|PAG549514 Pantoea agglomerans partial 23S rRNA ge...	70	7e-09
445	emb|AJ549513.1|KOX549513 Klebsiella oxytoca partial 23S rRNA gen...	70	7e-09
446	emb|AJ549512.1|KPN549512 Klebsiella pneumoniae subsp. pneumoniae...	70	7e-09
447	emb|AJ549510.1|CFR549510 Citrobacter freundii partial 23S rRNA g...	70	7e-09
448	emb|AJ549508.1|ECO549508 Escherichia coli partial 23S rRNA gene,...	70	7e-09
449	gb|AF263556.1| Secondary endosymbiont of Aphalaroida inermis 16S...	70	7e-09
450	gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome	70	7e-09
451	dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome	70	7e-09
452	emb|AJ278710.1|ECO278710 Escherichia coli 23S rRNA gene, strain ...	70	7e-09
453	emb|V00348.1|ECRRNBZ E. coli ribosomal operon rrnB encoding the ...	70	7e-09
454	emb|V00331.1|ECRNA3 E. coli gene rrnB (codes for 23S ribosomal RNA)	70	7e-09
455	gb|AF053968.1|AF053968 Escherichia coli strain A 8190 rrlC opero...	70	7e-09
456	gb|AF053967.1|AF053967 Escherichia coli strain ECOR 24 rrlB oper...	70	7e-09
457	gb|AF053966.1|AF053966 Escherichia coli rrlD operon, complete se...	70	7e-09
458	gb|AF053965.1|AF053965 Escherichia coli strain ECOR 40 rrlB oper...	70	7e-09
459	gb|AF053964.1|AF053964 Escherichia coli strain ECOR 52 rrlD oper...	70	7e-09
460	gb|AF053963.1|AF053963 Escherichia coli strain ECOR 35 rrlC oper...	70	7e-09
461	gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro...	70	7e-09
462	dbj|AB031215.1| Bacillus halodurans ygaG, orf, ygxA, rrnH-16S, r...	70	7e-09
463	dbj|AB031214.1| Bacillus halodurans yvgQ, rrnG-16S, trn-lle, trn...	70	7e-09
464	dbj|AB031213.1| Bacillus halodurans ydcI, ydcK, trn-Asn, trn-Ser...	70	7e-09
465	dbj|AB031212.1| Bacillus halodurans orf1, orf2, kbaA, ybaN, rrnE...	70	7e-09
466	dbj|AB031211.1| Bacillus halodurans lysS, rrnC-16S, trn-Ile, trn...	70	7e-09
467	dbj|AB031210.1| Bacillus halodurans dnaX, yaaK, recR, yaaL, bofA...	70	7e-09
468	dbj|AB031209.1| Bacillus halodurans orf1, orf2, rrnA-16S, rrnA-2...	70	7e-09
469	gb|U77928.1|CFU77928 Citrobacter freundii 23S ribosomal RNA (rrl...	70	7e-09
470	gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome	70	7e-09
471	gb|J01695.1|ECORGNB E.coli rRNA operon (rrnB) coding for Glu-tRN...	70	7e-09
472	pdb|2AWB|B Chain B, Crystal Structure Of The Bacterial Ribosome ...	70	7e-09
473	pdb|2AW4|B Chain B, Crystal Structure Of The Bacterial Ribosome ...	70	7e-09
474	gb|U72488.1|CVU72488 Cloning vector pRNA8, complete sequence	70	7e-09
475	dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome	70	7e-09
476	gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6	70	7e-09
477	gb|CP000034.1| Shigella dysenteriae Sd197, complete genome	70	7e-09
478	emb|X87284.1|KP23S1388 K.pneumoniae 23S rRNA gene, ATCC 13883 T	70	7e-09
479	pdb|1P86|0 Chain 0, Real Space Refined Coordinates Of The 50s Su...	70	7e-09
480	pdb|1P85|0 Chain 0, Real Space Refined Coordinates Of The 50s Su...	70	7e-09
481	gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes	70	7e-09
482	pdb|1C2W|B Chain B, 23s Rrna Structure Fitted To A Cryo-Electron...	70	7e-09
483	gb|CP000036.1| Shigella boydii Sb227, complete genome	70	7e-09
484	gb|CP000038.1| Shigella sonnei Ss046, complete genome	70	7e-09
485	dbj|D11459.1|BAC23SRR B. alcalophilus gene for 23S ribosomal RNA...	70	7e-09
486	dbj|D12649.1|ECORRNH E.coli rrnH gene for rRNAs and tRNAs	70	7e-09
487	dbj|AB035926.1| Escherichia coli O157:H7 yaeD, rrsH, ileV, alaV,...	70	7e-09
488	dbj|AB035925.1| Escherichia coli O157:H7 clpB, rrsG, gltW, rrlG,...	70	7e-09
489	dbj|AB035924.1| Escherichia coli O157:H7 purH, rrsE, gltV, rrlE,...	70	7e-09
490	dbj|AB035923.1| Escherichia coli O157:H7 yrdA, rrsD, ileU, alaU,...	70	7e-09
491	dbj|AB035922.1| Escherichia coli O157:H7 yieP, rrsC, gltU, rrlC,...	70	7e-09
492	dbj|AB035921.1| Escherichia coli O157:H7 murI, rrsB, gltT, rrlB,...	70	7e-09
493	dbj|AB035920.1| Escherichia coli O157:H7 hemG, rrsA, ileT, alaT,...	70	7e-09
494	dbj|AB013373.1| Bacillus halodurans C-125 23S, 5S and 16S rRNA g...	70	7e-09
495	gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome	68	3e-08
496	gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome	68	3e-08
497	gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-...	68	3e-08
498	gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete...	68	3e-08
499	gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome	68	3e-08
500	gb|AY224388.1| Bacillus cereus strain BGSC 6A5 rrnM operon, comp...	68	3e-08

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 43188 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 43247

                                                                         
Query: 62    ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 43248 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 43307

                                                                         
Query: 122   cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43308 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 43367

                                                                         
Query: 182   ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43368 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 43427

                                                                         
Query: 242   gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43428 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 43487

                                                                         
Query: 302   cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43488 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 43547

                                                                         
Query: 362   gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43548 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 43607

                 
Query: 422   acat 425
             ||||
Sbjct: 43608 acat 43611



 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21929 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 21870

                                                                         
Query: 62    ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21869 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 21810

                                                                         
Query: 122   cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21809 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 21750

                                                                         
Query: 182   ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21749 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 21690

                                                                         
Query: 242   gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21689 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 21630

                                                                         
Query: 302   cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21629 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 21570

                                                                         
Query: 362   gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21569 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 21510

                 
Query: 422   acat 425
             ||||
Sbjct: 21509 acat 21506



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43690 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 43749

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 43750 atcagtga 43757



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21427 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 21368

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 21367 atcagtga 21360

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122028 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 122087

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122088 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 122147

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122148 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 122207

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122208 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 122267

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122268 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 122327

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122328 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 122387

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122388 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 122447

                  
Query: 422    acat 425
              ||||
Sbjct: 122448 acat 122451



 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 100809 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 100750

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 100749 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 100690

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100689 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 100630

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100629 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 100570

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100569 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 100510

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100509 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 100450

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100449 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 100390

                  
Query: 422    acat 425
              ||||
Sbjct: 100389 acat 100386



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122530 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 122589

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 122590 atcagtga 122597



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100307 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 100248

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 100247 atcagtga 100240

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 122745 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 122804

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122805 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 122864

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122865 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 122924

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122925 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 122984

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122985 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 123044

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123045 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 123104

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123105 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 123164

                  
Query: 422    acat 425
              ||||
Sbjct: 123165 acat 123168



 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 101486 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcg 101427

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 101426 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 101367

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101366 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 101307

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101306 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 101247

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101246 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 101187

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101186 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 101127

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101126 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 101067

                  
Query: 422    acat 425
              ||||
Sbjct: 101066 acat 101063



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123247 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 123306

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 123307 atcagtga 123314



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100984 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 100925

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 100924 atcagtga 100917

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 118364 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagcg 118423

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 118424 ccgtagcgcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatactt 118483

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118484 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 118543

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118544 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 118603

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118604 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 118663

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118664 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 118723

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118724 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 118783

                  
Query: 422    acat 425
              ||||
Sbjct: 118784 acat 118787



 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 96530 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcagttacatacttcagcg 96471

                                                                         
Query: 62    ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
             |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 96470 ccgtagcgcctggtatgagcctcgtggagaagcaatcgctagtccacggggctcatactt 96411

                                                                         
Query: 122   cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96410 cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 96351

                                                                         
Query: 182   ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96350 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 96291

                                                                         
Query: 242   gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96290 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 96231

                                                                         
Query: 302   cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96230 cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 96171

                                                                         
Query: 362   gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96170 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 96111

                 
Query: 422   acat 425
             ||||
Sbjct: 96110 acat 96107



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118866 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118925

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118926 atcagtga 118933



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96028 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 95969

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 95968 atcagtga 95961

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 117146 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 117205

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117206 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 117265

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117266 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 117325

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117326 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 117385

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117386 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 117445

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117446 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 117505

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117506 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 117565

                 
Query: 423    cat 425
              |||
Sbjct: 117566 cat 117568



 Score =  127 bits (64), Expect = 4e-26
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 117647 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 117706

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 117707 atcagtga 117714

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118230 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 118289

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118290 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 118349

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118350 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 118409

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118410 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 118469

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118470 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 118529

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118530 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 118589

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118590 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 118649

                 
Query: 423    cat 425
              |||
Sbjct: 118650 cat 118652



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96926 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 96867

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96866 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 96807

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96806 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 96747

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96746 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 96687

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96686 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 96627

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96626 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 96567

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96566 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 96507

                
Query: 423   cat 425
             |||
Sbjct: 96506 cat 96504



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118731 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118790

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118791 atcagtga 118798



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96425 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96366

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96365 atcagtga 96358

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118230 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 118289

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118290 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 118349

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118350 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 118409

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118410 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 118469

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118470 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 118529

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118530 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 118589

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118590 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 118649

                 
Query: 423    cat 425
              |||
Sbjct: 118650 cat 118652



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96926 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 96867

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96866 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 96807

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96806 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 96747

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96746 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 96687

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96686 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 96627

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96626 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 96567

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96566 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 96507

                
Query: 423   cat 425
             |||
Sbjct: 96506 cat 96504



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118731 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118790

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118791 atcagtga 118798



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96425 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96366

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96365 atcagtga 96358

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118179 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 118238

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118239 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 118298

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118299 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 118358

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118359 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 118418

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118419 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 118478

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118479 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 118538

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118539 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 118598

                 
Query: 423    cat 425
              |||
Sbjct: 118599 cat 118601



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96871 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 96812

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96811 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 96752

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96751 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 96692

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96691 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 96632

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96631 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 96572

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96571 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 96512

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96511 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 96452

                
Query: 423   cat 425
             |||
Sbjct: 96451 cat 96449



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118680 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118739

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118740 atcagtga 118747



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96370 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96311

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96310 atcagtga 96303

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 31509504 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 31509445

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31509444 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 31509385

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509384 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 31509325

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509324 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 31509265

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509264 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 31509205

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509204 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 31509145

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509144 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 31509085

                   
Query: 423      cat 425
                |||
Sbjct: 31509084 cat 31509082



 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Plus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 27320046 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 27320105

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27320106 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 27320165

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 27320166 agcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttcttac 27320225

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320226 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 27320285

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320286 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 27320345

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 27320346 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgtgg 27320405

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320406 aggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagccga 27320465

                   
Query: 423      cat 425
                |||
Sbjct: 27320466 cat 27320468



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                            
Query: 323      tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 382
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11512918 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11512977

                                                           
Query: 383      ggcattggattctcaccaatgttttcgttactcaagccgacat 425
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11512978 ggcattggattctcaccaatgttttcgttactcaagccgacat 11513020



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509003 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 31508944

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 31508943 atcagtga 31508936



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320547 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 27320606

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 27320607 atcagtga 27320614



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513099 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 11513158

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 11513159 atcagtga 11513166

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 83092 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 83151

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 83152 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 83211

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83212 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 83271

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83272 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 83331

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83332 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 83391

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83392 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 83451

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83452 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 83511

                
Query: 423   cat 425
             |||
Sbjct: 83512 cat 83514



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83593 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 83652

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 83653 atcagtga 83660

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 123967 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 123908

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 123907 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 123848

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123847 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 123788

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123787 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 123728

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123727 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 123668

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123667 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 123608

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123607 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 123548

                 
Query: 423    cat 425
              |||
Sbjct: 123547 cat 123545



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 15693 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 15634

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15633 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 15574

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15573 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 15514

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15513 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 15454

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15453 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 15394

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15393 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 15334

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15333 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 15274

                
Query: 423   cat 425
             |||
Sbjct: 15273 cat 15271



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123466 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 123407

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 123406 atcagtga 123399



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15192 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 15133

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 15132 atcagtga 15125

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 142501 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 142442

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 142441 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 142382

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142381 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 142322

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142321 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 142262

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142261 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 142202

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142201 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 142142

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142141 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 142082

                 
Query: 423    cat 425
              |||
Sbjct: 142081 cat 142079



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142000 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 141941

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 141940 atcagtga 141933

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 56918 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 56977

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 56978 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 57037

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57038 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 57097

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57098 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 57157

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57158 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 57217

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57218 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 57277

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57278 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 57337

                
Query: 423   cat 425
             |||
Sbjct: 57338 cat 57340



 Score =  127 bits (64), Expect = 4e-26
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 57419 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 57478

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 57479 atcagtga 57486

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9269853 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 9269794

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9269793 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 9269734

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269733 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 9269674

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269673 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 9269614

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269613 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 9269554

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269553 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 9269494

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269493 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 9269434

                  
Query: 423     cat 425
               |||
Sbjct: 9269433 cat 9269431



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9229353 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 9229294

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9229293 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 9229234

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229233 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 9229174

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229173 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 9229114

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229113 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 9229054

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229053 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 9228994

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228993 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 9228934

                  
Query: 423     cat 425
               |||
Sbjct: 9228933 cat 9228931



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9165941 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 9165882

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9165881 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 9165822

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165821 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 9165762

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165761 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 9165702

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165701 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 9165642

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165641 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 9165582

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165581 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 9165522

                  
Query: 423     cat 425
               |||
Sbjct: 9165521 cat 9165519



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9057767 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 9057708

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9057707 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 9057648

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057647 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 9057588

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057587 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 9057528

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057527 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 9057468

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057467 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 9057408

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057407 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 9057348

                  
Query: 423     cat 425
               |||
Sbjct: 9057347 cat 9057345



 Score =  149 bits (75), Expect = 1e-32
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                            
Query: 55       ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 114
                ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||
Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811

                                                       
Query: 115      catacttcagcgctgcagcgcttggtactcggacctcgg 153
                ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                           
Query: 421     gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269352 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9269293

                       
Query: 481     atcagtga 488
               ||||||||
Sbjct: 9269292 atcagtga 9269285



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                           
Query: 421     gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228852 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9228793

                       
Query: 481     atcagtga 488
               ||||||||
Sbjct: 9228792 atcagtga 9228785



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                           
Query: 421     gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165440 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9165381

                       
Query: 481     atcagtga 488
               ||||||||
Sbjct: 9165380 atcagtga 9165373



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                           
Query: 421     gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057266 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9057207

                       
Query: 481     atcagtga 488
               ||||||||
Sbjct: 9057206 atcagtga 9057199



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                         
Query: 214     aacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 271
               ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaataaggg 5792165

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19939838 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 19939779

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19939778 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 19939719

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939718 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 19939659

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939658 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 19939599

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939598 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 19939539

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939538 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 19939479

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939478 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 19939419

                   
Query: 423      cat 425
                |||
Sbjct: 19939418 cat 19939416



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10275593 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 10275652

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10275653 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 10275712

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275713 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 10275772

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275773 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 10275832

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275833 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 10275892

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275893 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 10275952

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275953 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 10276012

                   
Query: 423      cat 425
                |||
Sbjct: 10276013 cat 10276015



 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10388705 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 10388646

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10388645 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 10388586

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388585 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 10388526

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388525 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 10388466

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388465 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 10388406

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10388405 gactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgcgg 10388346

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388345 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 10388286

                   
Query: 423      cat 425
                |||
Sbjct: 10388285 cat 10388283



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939337 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19939278

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 19939277 atcagtga 19939270



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388204 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 10388145

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 10388144 atcagtga 10388137



 Score =  127 bits (64), Expect = 4e-26
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10276094 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 10276153

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 10276154 atcagtga 10276161



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                       
Query: 445      gcttagccccgttcatcttcagcgcaagggcgctcgatc 483
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 15833473 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15833511

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9240428 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 9240487

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9240488 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 9240547

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240548 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 9240607

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240608 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 9240667

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240668 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 9240727

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240728 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 9240787

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240788 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 9240847

                  
Query: 423     cat 425
               |||
Sbjct: 9240848 cat 9240850



 Score =  206 bits (104), Expect = 5e-50
 Identities = 189/216 (87%), Gaps = 6/216 (2%)
 Strand = Plus / Plus

                                                                           
Query: 2       ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
               |||||||||||||| || ||||||||||||  |||||||||| |     |||||||||||
Sbjct: 3579667 ttttgttgaaggtcatttgagcttttcctgaaagtatggcatgg-----atacttcagcg 3579721

                                                                           
Query: 62      ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
                | || ||  ||||| |||||||||||  ||||||| |||||||||   |||||||||||
Sbjct: 3579722 tcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatatggctcatactt 3579781

                                                                           
Query: 122     cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
               ||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||
Sbjct: 3579782 cagcgctgcagcgcttggtactcggaccttggcttaaggcattttctcta-cccttctta 3579840

                                                   
Query: 182     ccctgaaaaagcagggtcaccttgtgtccttaaacc 217
               ||||||||||| ||||||||||||||||||||||||
Sbjct: 3579841 ccctgaaaaaggagggtcaccttgtgtccttaaacc 3579876



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                           
Query: 421     gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240929 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9240988

                       
Query: 481     atcagtga 488
               ||||||||
Sbjct: 9240989 atcagtga 9240996



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                    
Query: 317      gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaa 368
                ||||||||||||||||| | |||| |||| |||||||| |||| ||||||||
Sbjct: 22198978 gcctgatcttaggccctaattcactctccatggacgaatcttgtggaggaaa 22199029



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 431      agcttcggcagatcgcttagccccgttcatcttcagcgca 470
                ||||| |||||||||||||||||| ||||| |||| ||||
Sbjct: 22199093 agctttggcagatcgcttagccccattcattttcaacgca 22199132

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 31600020 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 31599961

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31599960 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 31599901

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599900 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 31599841

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599840 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 31599781

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599780 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 31599721

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599720 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 31599661

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599660 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 31599601

                   
Query: 423      cat 425
                |||
Sbjct: 31599600 cat 31599598



 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Plus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 27411369 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 27411428

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27411429 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 27411488

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 27411489 agcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttcttac 27411548

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411549 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 27411608

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411609 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 27411668

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 27411669 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgtgg 27411728

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411729 aggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagccga 27411788

                   
Query: 423      cat 425
                |||
Sbjct: 27411789 cat 27411791



 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                            
Query: 323      tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 382
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509681 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11509740

                                                           
Query: 383      ggcattggattctcaccaatgttttcgttactcaagccgacat 425
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509741 ggcattggattctcaccaatgttttcgttactcaagccgacat 11509783



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599519 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 31599460

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 31599459 atcagtga 31599452



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411870 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 27411929

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 27411930 atcagtga 27411937



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509862 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 11509921

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 11509922 atcagtga 11509929

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 46205 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 46264

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 46265 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 46324

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46325 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 46384

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46385 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 46444

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46445 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 46504

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46505 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 46564

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46565 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 46624

                
Query: 423   cat 425
             |||
Sbjct: 46625 cat 46627



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46706 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 46765

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 46766 atcagtga 46773

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 51641 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 51700

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 51701 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 51760

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51761 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 51820

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51821 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 51880

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51881 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 51940

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51941 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 52000

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52001 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 52060

                
Query: 423   cat 425
             |||
Sbjct: 52061 cat 52063



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52142 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 52201

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 52202 atcagtga 52209

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
           insert sequence
          Length = 2146

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 775 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 716

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 715 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 656

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 596

                                                                       
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 536

                                                                       
Query: 243 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 476

                                                                       
Query: 303 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 416

                                                                       
Query: 363 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 356

              
Query: 423 cat 425
           |||
Sbjct: 355 cat 353



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 215

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 214 atcagtga 207

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1500 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 1441

                                                                        
Query: 63   cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1440 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 1381

                                                                        
Query: 123  agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 1321

                                                                        
Query: 183  cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 1261

                                                                        
Query: 243  cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 1201

                                                                        
Query: 303  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 1141

                                                                        
Query: 363  aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 1081

               
Query: 423  cat 425
            |||
Sbjct: 1080 cat 1078



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 940

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 939 atcagtga 932

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
            insert sequence
          Length = 2589

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1371 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 1312

                                                                        
Query: 63   cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1311 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 1252

                                                                        
Query: 123  agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 1192

                                                                        
Query: 183  cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 1132

                                                                        
Query: 243  cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 1072

                                                                        
Query: 303  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 1012

                                                                        
Query: 363  aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 952

               
Query: 423  cat 425
            |||
Sbjct: 951  cat 949



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 811

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 810 atcagtga 803

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
            insert sequence
          Length = 1896

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1500 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 1441

                                                                        
Query: 63   cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1440 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 1381

                                                                        
Query: 123  agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 1321

                                                                        
Query: 183  cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 1261

                                                                        
Query: 243  cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 1201

                                                                        
Query: 303  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 1141

                                                                        
Query: 363  aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 1081

               
Query: 423  cat 425
            |||
Sbjct: 1080 cat 1078



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 940

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 939 atcagtga 932

---

>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full
            insert sequence
          Length = 1310

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                        
Query: 3    tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
            ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1123 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 1064

                                                                        
Query: 63   cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1063 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 1004

                                                                        
Query: 123  agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 944

                                                                        
Query: 183  cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 884

                                                                        
Query: 243  cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883  cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 824

                                                                        
Query: 303  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 764

                                                                        
Query: 363  aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763  aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 704

               
Query: 423  cat 425
            |||
Sbjct: 703  cat 701



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 563

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 562 atcagtga 555

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 19951114 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 19951055

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19951054 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 19950995

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950994 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 19950935

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950934 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 19950875

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950874 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 19950815

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950814 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 19950755

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950754 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 19950695

                   
Query: 423      cat 425
                |||
Sbjct: 19950694 cat 19950692



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10281632 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 10281691

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10281692 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 10281751

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281752 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 10281811

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281812 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 10281871

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281872 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 10281931

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281932 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 10281991

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281992 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 10282051

                   
Query: 423      cat 425
                |||
Sbjct: 10282052 cat 10282054



 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                            
Query: 3        tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
                ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 10394744 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 10394685

                                                                            
Query: 63       cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10394684 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 10394625

                                                                            
Query: 123      agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394624 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 10394565

                                                                            
Query: 183      cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394564 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 10394505

                                                                            
Query: 243      cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394504 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 10394445

                                                                            
Query: 303      gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
                |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 10394444 gactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgcgg 10394385

                                                                            
Query: 363      aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394384 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 10394325

                   
Query: 423      cat 425
                |||
Sbjct: 10394324 cat 10394322



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950613 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19950554

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 19950553 atcagtga 19950546



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394243 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 10394184

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 10394183 atcagtga 10394176



 Score =  127 bits (64), Expect = 4e-26
 Identities = 67/68 (98%)
 Strand = Plus / Plus

                                                                            
Query: 421      gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10282133 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 10282192

                        
Query: 481      atcagtga 488
                ||||||||
Sbjct: 10282193 atcagtga 10282200



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 39/39 (100%)
 Strand = Plus / Plus

                                                       
Query: 445      gcttagccccgttcatcttcagcgcaagggcgctcgatc 483
                |||||||||||||||||||||||||||||||||||||||
Sbjct: 15841714 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15841752

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 118173 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 118232

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118233 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 118292

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118293 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 118352

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118353 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 118412

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118413 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 118472

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118473 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 118532

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118533 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 118592

                 
Query: 423    cat 425
              |||
Sbjct: 118593 cat 118595



 Score =  823 bits (415), Expect = 0.0
 Identities = 421/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96866 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 96807

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96806 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 96747

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96746 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 96687

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96686 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 96627

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96626 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 96567

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96566 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 96507

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96506 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 96447

                
Query: 423   cat 425
             |||
Sbjct: 96446 cat 96444



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118674 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118733

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118734 atcagtga 118741



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96365 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96306

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96305 atcagtga 96298

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 95097 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 95038

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 95037 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 94978

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94977 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 94918

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94917 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 94858

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94857 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 94798

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94797 gactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgcgg 94738

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94737 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 94678

                
Query: 423   cat 425
             |||
Sbjct: 94677 cat 94675



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94596 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 94537

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 94536 atcagtga 94529

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 29161 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 29102

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29101 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 29042

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29041 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 28982

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28981 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 28922

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28921 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 28862

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 28861 gactacgcctttcggcctgatcttaggccctgactcaccctctgtggacgaaccttgcgg 28802

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28801 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 28742

                
Query: 423   cat 425
             |||
Sbjct: 28741 cat 28739



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28660 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 28601

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 28600 atcagtga 28593

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
           insert sequence
          Length = 1345

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 579 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 520

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 519 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 460

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 400

                                                                       
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 340

                                                                       
Query: 243 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 280

                                                                       
Query: 303 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 279 gactacgcctttcggcctgatcctaggccctgactcaccctccgtggacgaaccttgcgg 220

                                                                       
Query: 363 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 160

              
Query: 423 cat 425
           |||
Sbjct: 159 cat 157



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 18  atcagtga 11

---

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
           insert sequence
          Length = 2509

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 644 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 585

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 584 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 525

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 465

                                                                       
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 405

                                                                       
Query: 243 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 404 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacccgttgtccatc 345

                                                                       
Query: 303 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 285

                                                                       
Query: 363 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 225

              
Query: 423 cat 425
           |||
Sbjct: 224 cat 222



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 84

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 83  atcagtga 76

---

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
           insert sequence
          Length = 1383

 Score =  815 bits (411), Expect = 0.0
 Identities = 420/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 588 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 529

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 528 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 469

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 409

                                                                       
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 349

                                                                       
Query: 243 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 348 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccgtc 289

                                                                       
Query: 303 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 229

                                                                       
Query: 363 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 169

              
Query: 423 cat 425
           |||
Sbjct: 168 cat 166



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 28

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 27  atcagtga 20

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  807 bits (407), Expect = 0.0
 Identities = 420/423 (99%), Gaps = 1/423 (0%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 118200 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-cgc 118258

                                                                          
Query: 63     cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118259 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 118318

                                                                          
Query: 123    agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118319 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 118378

                                                                          
Query: 183    cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118379 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 118438

                                                                          
Query: 243    cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118439 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 118498

                                                                          
Query: 303    gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118499 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 118558

                                                                          
Query: 363    aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118559 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 118618

                 
Query: 423    cat 425
              |||
Sbjct: 118619 cat 118621



 Score =  807 bits (407), Expect = 0.0
 Identities = 420/423 (99%), Gaps = 1/423 (0%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 96918 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttca-cgc 96860

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96859 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 96800

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96799 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 96740

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96739 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 96680

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96679 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 96620

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96619 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 96560

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96559 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 96500

                
Query: 423   cat 425
             |||
Sbjct: 96499 cat 96497



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118700 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118759

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 118760 atcagtga 118767



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96418 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96359

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96358 atcagtga 96351

---

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Plus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 20253 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 20312

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20313 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 20372

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 20373 agcgctgcagtgcttggtactcggacctcggctcgaggcattttttctaccccttcttac 20432

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20433 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 20492

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20493 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 20552

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 20553 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgtgg 20612

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 20613 aggaaaccttgggttttcagggcattggattctcaccaatgttttcgttactcaagccga 20672

                
Query: 423   cat 425
             |||
Sbjct: 20673 cat 20675



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20754 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 20813

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 20814 atcagtga 20821

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Plus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 5634112 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcac 5634171

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 5634172 cgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttc 5634231

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634232 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 5634291

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5634292 cctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacctag 5634351

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634352 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 5634411

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634412 gactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 5634471

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634472 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 5634531

                  
Query: 423     cat 425
               |||
Sbjct: 5634532 cat 5634534



 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Plus

                                                                            
Query: 107      acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 166
                |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146

                                                           
Query: 167      ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 209
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13417189

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Plus

                                                                           
Query: 3       tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
               ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 5634101 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcac 5634160

                                                                           
Query: 63      cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
               |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 5634161 cgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttc 5634220

                                                                           
Query: 123     agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634221 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 5634280

                                                                           
Query: 183     cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
               ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5634281 cctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacctag 5634340

                                                                           
Query: 243     cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634341 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 5634400

                                                                           
Query: 303     gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
               |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634401 gactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 5634460

                                                                           
Query: 363     aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634461 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 5634520

                  
Query: 423     cat 425
               |||
Sbjct: 5634521 cat 5634523



 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Plus

                                                                            
Query: 107      acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 166
                |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420

                                                           
Query: 167      ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 209
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13371463

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  791 bits (399), Expect = 0.0
 Identities = 417/423 (98%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 18773 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcac 18714

                                                                         
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
             |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 18713 cgtagcgcctggtatgagcctcgtcgagaagcaatggctagtccacggggctcatacttc 18654

                                                                         
Query: 123   agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18653 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 18594

                                                                         
Query: 183   cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18593 cctgaaaaagcagggtcaccttgcgtccttaaacctataaccatctttcggctaacctag 18534

                                                                         
Query: 243   cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18533 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 18474

                                                                         
Query: 303   gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 362
             |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18473 gactacgcctttcgacctgatcttaggccctgactcaccctccgtggacgaaccttgcgg 18414

                                                                         
Query: 363   aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 422
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18413 aggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccga 18354

                
Query: 423   cat 425
             |||
Sbjct: 18353 cat 18351

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  777 bits (392), Expect = 0.0
 Identities = 417/424 (98%), Gaps = 1/424 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 121971 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcg 122029

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 122030 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 122089

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122090 tcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 122149

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122150 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 122209

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122210 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 122269

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122270 cgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 122329

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122330 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 122389

                  
Query: 422    acat 425
              ||||
Sbjct: 122390 acat 122393



 Score =  777 bits (392), Expect = 0.0
 Identities = 417/424 (98%), Gaps = 1/424 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 100766 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcg 100708

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 100707 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 100648

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100647 tcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 100588

                                                                          
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100587 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 100528

                                                                          
Query: 242    gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100527 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 100468

                                                                          
Query: 302    cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
              |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100467 cgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 100408

                                                                          
Query: 362    gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100407 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 100348

                  
Query: 422    acat 425
              ||||
Sbjct: 100347 acat 100344



 Score =  113 bits (57), Expect = 5e-22
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                       
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 477
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122472 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 122528



 Score =  113 bits (57), Expect = 5e-22
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 477
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100265 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 100209

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  777 bits (392), Expect = 0.0
 Identities = 417/424 (98%), Gaps = 1/424 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 7119 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcg 7061

                                                                        
Query: 62   ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 7060 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 7001

                                                                        
Query: 122  cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7000 tcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 6941

                                                                        
Query: 182  ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6940 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 6881

                                                                        
Query: 242  gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6880 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 6821

                                                                        
Query: 302  cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
            |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6820 cgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 6761

                                                                        
Query: 362  gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6760 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 6701

                
Query: 422  acat 425
            ||||
Sbjct: 6700 acat 6697



 Score =  113 bits (57), Expect = 5e-22
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                     
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 477
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6618 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 6562

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  777 bits (392), Expect = 0.0
 Identities = 417/424 (98%), Gaps = 1/424 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 1707 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttc-gcg 1649

                                                                        
Query: 62   ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1648 ccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatactt 1589

                                                                        
Query: 122  cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 tcgcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 1529

                                                                        
Query: 182  ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 ccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaaccta 1469

                                                                        
Query: 242  gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 gcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccat 1409

                                                                        
Query: 302  cgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
            |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 cgacttagcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 1349

                                                                        
Query: 362  gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 gaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccg 1289

                
Query: 422  acat 425
            ||||
Sbjct: 1288 acat 1285



 Score =  113 bits (57), Expect = 5e-22
 Identities = 57/57 (100%)
 Strand = Plus / Minus

                                                                     
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 477
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc 1150

---

>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full
           insert sequence
          Length = 1809

 Score =  696 bits (351), Expect = 0.0
 Identities = 357/359 (99%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 359 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 300

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 299 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 240

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 180

                                                                       
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 cctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctag 120

                                                                       
Query: 243 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatc 60

                                                                      
Query: 303 gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 361
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59  gactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcg 1

---

>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial
           sequence; chloroplast
          Length = 654

 Score =  593 bits (299), Expect = e-166
 Identities = 299/299 (100%)
 Strand = Plus / Plus

                                                                       
Query: 127 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60

                                                                       
Query: 187 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 120

                                                                       
Query: 247 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 180

                                                                       
Query: 307 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 240

                                                                      
Query: 367 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 299



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 437

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 438 atcagtga 445

---

>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full
            insert sequence
          Length = 1935

 Score =  569 bits (287), Expect = e-159
 Identities = 290/291 (99%)
 Strand = Plus / Minus

                                                                        
Query: 135  cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 194
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114

                                                                        
Query: 195  gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1054

                                                                        
Query: 255  ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 994

                                                                        
Query: 315  cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993  cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 934

                                                               
Query: 375  gttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933  gttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 883



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 745

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 744 atcagtga 737

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 137981 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138040

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138041 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138100

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138101 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138160

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 138161 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 138220

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 138221 agccgacat 138229



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111116 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111057

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111056 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110997

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110996 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110937

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 110936 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 110877

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 110876 agccgacat 110868



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 138309 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 138368

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 138369 tcagtga 138375



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 110788 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 110729

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 110728 tcagtga 110722



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 137875 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 137930

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 137931 ccgtagcgcctggta 137945



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 111222 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 111167

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 111166 ccgtagcgcctggta 111152

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 131252 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131311

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131312 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131371

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131372 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131431

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131432 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131491

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 131492 agccgacat 131500



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105626 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105567

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105566 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105507

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105506 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105447

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105446 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105387

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 105386 agccgacat 105378



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 131580 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 131639

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 131640 tcagtga 131646



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 105298 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 105239

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 105238 tcagtga 105232



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 131146 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 131201

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 131202 ccgtagcgcctggta 131216



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 105732 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 105677

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 105676 ccgtagcgcctggta 105662

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 130144 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 130203

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 130204 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130263

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130264 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130323

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130324 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130383

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 130384 agccgacat 130392



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 104491 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 104432

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 104431 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 104372

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104371 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104312

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 104311 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 104252

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 104251 agccgacat 104243



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 130472 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 130531

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 130532 tcagtga 130538



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 104163 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 104104

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 104103 tcagtga 104097



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||| ||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 130038 ttttgttgaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 130093

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 130094 ccgtagcgcctggta 130108



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||| ||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 104597 ttttgttgaaggccgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 104542

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 104541 ccgtagcgcctggta 104527

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 138835 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 138894

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138895 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138954

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138955 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 139014

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 139015 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 139074

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 139075 agccgacat 139083



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111225 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 111166

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111165 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 111106

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111105 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111046

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 111045 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110986

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 110985 agccgacat 110977



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 139172 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 139231

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 139232 tcagtga 139238



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 110888 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 110829

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 110828 tcagtga 110822



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 138729 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 138784

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 138785 ccgtagcgcctggta 138799



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 111331 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 111276

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 111275 ccgtagcgcctggta 111261

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || |||||||| ||||||||||||||||||
Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 141416 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 141475

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141476 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 141535

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 141536 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 141595

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 141596 agccgacat 141604



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || |||||||| ||||||||||||||||||
Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 111912 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 111853

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111852 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111793

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 111792 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 111733

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 111732 agccgacat 111724



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 141684 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 141743

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 141744 tcagtga 141750



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 111644 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 111585

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 111584 tcagtga 111578



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 67/73 (91%), Gaps = 4/73 (5%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              |||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||
Sbjct: 141252 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 141307

                           
Query: 64     gtagcgcctggta 76
              ||||||| |||||
Sbjct: 141308 gtagcgcttggta 141320



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 67/73 (91%), Gaps = 4/73 (5%)
 Strand = Plus / Minus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              |||||||||||||||||||||||||||||||||||||||| |||    ||||||||||||
Sbjct: 112076 ttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgcc 112021

                           
Query: 64     gtagcgcctggta 76
              ||||||| |||||
Sbjct: 112020 gtagcgcttggta 112008

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              |||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 126344 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 126403

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 126404 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 126463

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126464 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 126523

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 126524 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 126583

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 126584 agccgacat 126592



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              |||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 108578 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 108519

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 108518 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 108459

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108458 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 108399

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 108398 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 108339

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 108338 agccgacat 108330



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 126671 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 126730

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 126731 atcagtga 126738



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 108251 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 108192

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 108191 atcagtga 108184



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 66/73 (90%), Gaps = 4/73 (5%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              |||||||||||||||||||||||||||| ||||||| ||| |||    ||||||||||||
Sbjct: 126240 ttgttgaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgcc 126295

                           
Query: 64     gtagcgcctggta 76
              |||||||||||||
Sbjct: 126296 gtagcgcctggta 126308



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 66/73 (90%), Gaps = 4/73 (5%)
 Strand = Plus / Minus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              |||||||||||||||||||||||||||| ||||||| ||| |||    ||||||||||||
Sbjct: 108682 ttgttgaaggtcgttcgagcttttcctgagagtatgacatgggt----tacttcagcgcc 108627

                           
Query: 64     gtagcgcctggta 76
              |||||||||||||
Sbjct: 108626 gtagcgcctggta 108614

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 135069 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 135128

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 135129 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 135188

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135189 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135248

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135249 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135308

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 135309 agccgacat 135317



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 107356 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 107297

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107296 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107237

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107236 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107177

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107176 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107117

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107116 agccgacat 107108



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 135397 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 135456

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 135457 tcagtga 135463



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107028 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 106969

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106968 tcagtga 106962



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||| | |||    ||||||||||
Sbjct: 134963 ttttgttgaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcg 135018

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 135019 ccgtagcgcctggta 135033



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||| | |||    ||||||||||
Sbjct: 107462 ttttgttgaaggtcgttcgagcttttcctgggagtatggcgtgggt----tacttcagcg 107407

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 107406 ccgtagcgcctggta 107392

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 132700 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 132759

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 132760 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132819

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132820 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132879

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 132939

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 132940 agccgacat 132948



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105271 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105212

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105211 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105152

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105151 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105092

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105091 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105032

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 105031 agccgacat 105023



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 133028 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 133087

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 133088 tcagtga 133094



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 104943 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 104884

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 104883 tcagtga 104877



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||| |||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 132594 ttttgttaaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 132649

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 132650 ccgtagcgcctggta 132664



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||| |||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 105377 ttttgttaaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 105322

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 105321 ccgtagcgcctggta 105307

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 131245 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131304

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131305 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131364

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131365 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131424

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131425 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131484

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 131485 agccgacat 131493



 Score =  486 bits (245), Expect = e-134
 Identities = 293/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105624 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105565

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105564 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105505

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105504 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105445

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105444 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105385

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 105384 agccgacat 105376



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 131573 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 131632

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 131633 tcagtga 131639



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 105296 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 105237

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 105236 tcagtga 105230



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 131139 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 131194

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 131195 ccgtagcgcctggta 131209



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 105730 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 105675

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 105674 ccgtagcgcctggta 105660

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  478 bits (241), Expect = e-132
 Identities = 293/309 (94%), Gaps = 1/309 (0%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 130269 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 130327

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 130328 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130387

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130388 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130447

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130448 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130507

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 130508 agccgacat 130516



 Score =  478 bits (241), Expect = e-132
 Identities = 293/309 (94%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 103176 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 103118

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 103117 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103058

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103057 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 102998

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 102997 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 102938

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 102937 agccgacat 102929



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 130163 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 130218

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 130219 ccgtagcgcctggta 130233



 Score =  115 bits (58), Expect = 1e-22
 Identities = 71/75 (94%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||
Sbjct: 103282 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggt----tacttcagcg 103227

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 103226 ccgtagcgcctggta 103212



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 130596 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 130655

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 130656 tcagtga 130662



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 102849 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 102790

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 102789 tcagtga 102783

---

>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence;
           tRNA-Ala (trnA) gene, complete sequence; hypothetical
           protein gene, complete cds; ACR pseudogene, complete
           sequence; tRNA-Ile (trnI) gene, partial sequence; and
           ORF72 pseudogene, partial sequence; chloroplast genes
           for chloroplast products
          Length = 3026

 Score =  478 bits (241), Expect = e-132
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 185 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60

                                                                       
Query: 245 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 120

                                                                       
Query: 305 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 180

                                                                       
Query: 365 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 240

            
Query: 425 t 425
           |
Sbjct: 241 t 241



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 379

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 380 atcagtga 387

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  478 bits (241), Expect = e-132
 Identities = 292/309 (94%), Gaps = 5/309 (1%)
 Strand = Plus / Minus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781

                                                                         
Query: 177   tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
             |||||||||||||     ||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 87780 tcttaccctgaaa-----gggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726

                                                                         
Query: 237   acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
             ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 87725 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 87666

                                                                         
Query: 297   tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87665 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 87606

                                                                         
Query: 357   ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
             ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 87605 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 87546

                      
Query: 417   agccgacat 425
             |||||||||
Sbjct: 87545 agccgacat 87537



 Score =  111 bits (56), Expect = 2e-21
 Identities = 65/68 (95%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 87458 gacatcccacagcttcggcagatcgcttagtcccgttcatcttcggcgcaagagcgctcg 87399

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 87398 atcagtga 87391



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 67/74 (90%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| |||    |||||||||||
Sbjct: 87885 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgc 87830

                           
Query: 63    cgtagcgcctggta 76
              ||||||| |||||
Sbjct: 87829 tgtagcgcttggta 87816

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  478 bits (241), Expect = e-132
 Identities = 292/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 132436 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 132495

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 132496 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132555

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132556 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132615

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132616 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 132675

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 132676 agccgacat 132684



 Score =  478 bits (241), Expect = e-132
 Identities = 292/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 106213 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 106154

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 106153 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 106094

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106093 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106034

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106033 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105974

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 105973 agccgacat 105965



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 132763 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 132822

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 132823 atcagtga 132830



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 105886 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 105827

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 105826 atcagtga 105819



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 132330 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 132385

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 132386 ccgtagcgcctggta 132400



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 106319 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 106264

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 106263 ccgtagcgcctggta 106249

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  478 bits (241), Expect = e-132
 Identities = 292/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 138186 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138245

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138246 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138305

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138306 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138365

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 138366 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 138425

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 138426 agccgacat 138434



 Score =  478 bits (241), Expect = e-132
 Identities = 292/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111113 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111054

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111053 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110994

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110993 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110934

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 110933 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110874

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 110873 agccgacat 110865



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 138514 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 138573

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 138574 tcagtga 138580



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 110785 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 110726

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 110725 tcagtga 110719



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 138080 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 138135

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 138136 ccgtagcgcctggta 138150



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 111219 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 111164

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 111163 ccgtagcgcctggta 111149

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  472 bits (238), Expect = e-130
 Identities = 293/310 (94%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055

                                                                          
Query: 177    tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 235
              ||||||||||||||| ||| |||||||||| |||||| |||| |||||||||||||||||
Sbjct: 138056 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 138115

                                                                          
Query: 236    aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 295
              |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 138116 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 138175

                                                                          
Query: 296    gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 355
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138176 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 138235

                                                                          
Query: 356    cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 415
              |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 138236 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 138295

                        
Query: 416    aagccgacat 425
              ||||||||||
Sbjct: 138296 aagccgacat 138305



 Score =  472 bits (238), Expect = e-130
 Identities = 293/310 (94%), Gaps = 1/310 (0%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890

                                                                          
Query: 177    tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 235
              ||||||||||||||| ||| |||||||||| |||||| |||| |||||||||||||||||
Sbjct: 111889 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 111830

                                                                          
Query: 236    aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 295
              |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 111829 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 111770

                                                                          
Query: 296    gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 355
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111769 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 111710

                                                                          
Query: 356    cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 415
              |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 111709 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 111650

                        
Query: 416    aagccgacat 425
              ||||||||||
Sbjct: 111649 aagccgacat 111640



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 138385 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 138444

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 138445 tcagtga 138451



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 111560 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 111501

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 111500 tcagtga 111494



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 137950 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 138005

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 138006 ccgtagcgcctggta 138020



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 111995 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 111940

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 111939 ccgtagcgcctggta 111925



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 327    aggccctgactcaccctccgtgga 350
              ||||||||||||||||||||||||
Sbjct: 144304 aggccctgactcaccctccgtgga 144327



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 327    aggccctgactcaccctccgtgga 350
              ||||||||||||||||||||||||
Sbjct: 105641 aggccctgactcaccctccgtgga 105618

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  470 bits (237), Expect = e-129
 Identities = 291/309 (94%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| || ||| |||| ||||||||||||||||||
Sbjct: 131475 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 131534

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131535 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131594

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131595 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131654

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131655 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 131714

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 131715 agccgacat 131723



 Score =  470 bits (237), Expect = e-129
 Identities = 291/309 (94%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| || ||| |||| ||||||||||||||||||
Sbjct: 105289 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 105230

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105229 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105170

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105169 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105110

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105109 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105050

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 105049 agccgacat 105041



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 131802 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 131861

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 131862 atcagtga 131869



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 104962 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 104903

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 104902 atcagtga 104895



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 131369 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 131424

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 131425 ccgtagcgcctggta 131439



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 105395 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 105340

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 105339 ccgtagcgcctggta 105325

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  470 bits (237), Expect = e-129
 Identities = 291/309 (94%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||| | ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1158 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1099

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 1098 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1039

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 979

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 978  ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 919

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 918  agccgacat 910



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                       
Query: 422 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
           ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 830 acatcccgcagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 771

                  
Query: 482 tcagtga 488
           |||||||
Sbjct: 770 tcagtga 764



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 62/75 (82%), Gaps = 11/75 (14%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            ||||||||||||||||||||||       ||||||||||||| |||    ||||||||||
Sbjct: 1257 ttttgttgaaggtcgttcgagc-------gggagtatggcatgggt----tacttcagcg 1209

                           
Query: 62   ccgtagcgcctggta 76
            ||||||| |||||||
Sbjct: 1208 ccgtagcacctggta 1194

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  470 bits (237), Expect = e-129
 Identities = 291/309 (94%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||||||
Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1524 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1465

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 1464 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1405

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1345

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1344 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1285

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 1284 agccgacat 1276



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1196 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 1137

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1136 tcagtga 1130



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 1630 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 1575

                           
Query: 62   ccgtagcgcctggta 76
            |||||||||||||||
Sbjct: 1574 ccgtagcgcctggta 1560

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  468 bits (236), Expect = e-129
 Identities = 291/309 (94%), Gaps = 4/309 (1%)
 Strand = Plus / Minus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869

                                                                         
Query: 177   tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
             ||||||||||||||    |||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 89868 tcttaccctgaaaa----gggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813

                                                                         
Query: 237   acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
             ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 89812 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 89753

                                                                         
Query: 297   tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89752 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 89693

                                                                         
Query: 357   ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
             ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 89692 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 89633

                      
Query: 417   agccgacat 425
             |||||||||
Sbjct: 89632 agccgacat 89624



 Score =  101 bits (51), Expect = 2e-18
 Identities = 63/67 (94%)
 Strand = Plus / Minus

                                                                         
Query: 422   acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
             ||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||||||||
Sbjct: 89544 acatcccacagcttcggcagatcgcttagtcccgttcatcttcggcgcacgagcgctcga 89485

                    
Query: 482   tcagtga 488
             |||||||
Sbjct: 89484 tcagtga 89478



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                              
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttac 50
             |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 89974 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttac 89926

---

>gb|DQ481232.1| Populus suaveolens unknown gene
          Length = 854

 Score =  462 bits (233), Expect = e-127
 Identities = 290/309 (93%)
 Strand = Plus / Minus

                                                                       
Query: 117 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
           ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475

                                                                       
Query: 177 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
           ||||||||||||||| ||||| |||| || |||||| |||| ||||||||||||||||||
Sbjct: 474 tcttaccctgaaaaaacagggacaccgtgcgtccttgaaccgataaccatctttcggcta 415

                                                                       
Query: 237 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
           ||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||
Sbjct: 414 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcgcctgttg 355

                                                                       
Query: 297 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 295

                                                                       
Query: 357 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
           ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 294 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 235

                    
Query: 417 agccgacat 425
           |||||||||
Sbjct: 234 agccgacat 226



 Score =  109 bits (55), Expect = 9e-21
 Identities = 65/67 (97%), Gaps = 1/67 (1%)
 Strand = Plus / Minus

                                                                       
Query: 422 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
           ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 147 acatcccacagcttcggcagatcgcttagccccgttcatcttc-gcgcaagagcgctcga 89

                  
Query: 482 tcagtga 488
           |||||||
Sbjct: 88  tcagtga 82



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                       
Query: 2   ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
           |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 580 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 525

                          
Query: 62  ccgtagcgcctggta 76
           |||||||||||||||
Sbjct: 524 ccgtagcgcctggta 510

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  462 bits (233), Expect = e-127
 Identities = 290/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||||| ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              | ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 130404 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 130463

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130464 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130523

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 130524 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 130583

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 130584 agccgacat 130592



 Score =  462 bits (233), Expect = e-127
 Identities = 290/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||||| ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              | ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 104990 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 104931

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104930 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104871

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 104870 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 104811

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 104810 agccgacat 104802



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 130672 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 130731

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 130732 tcagtga 130738



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 104722 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 104663

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 104662 tcagtga 104656



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 67/74 (90%), Gaps = 4/74 (5%)
 Strand = Plus / Plus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| | |    |||||||||||
Sbjct: 130239 tttgttgaaggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgc 130294

                            
Query: 63     cgtagcgcctggta 76
               |||||||||||||
Sbjct: 130295 tgtagcgcctggta 130308



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 67/74 (90%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| | |    |||||||||||
Sbjct: 105155 tttgttgaaggtcgttcgagcttttcctgggagtatggcatggat----tacttcagcgc 105100

                            
Query: 63     cgtagcgcctggta 76
               |||||||||||||
Sbjct: 105099 tgtagcgcctggta 105086

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 134378 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134437

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 134438 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134497

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134498 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134557

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134558 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134617

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134618 agccgacat 134626



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 107528 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107469

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107468 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107409

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107408 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107349

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107348 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107289

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107288 agccgacat 107280



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134706 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 134765

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134766 tcagtga 134772



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107200 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107141

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107140 tcagtga 107134



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 134272 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 134327

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 134328 ccgtagcgcctggta 134342



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 107634 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 107579

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 107578 ccgtagcgcctggta 107564

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 135415 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 135474

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 135475 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 135534

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135535 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135594

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135595 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135654

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 135655 agccgacat 135663



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 108142 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 108083

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 108082 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 108023

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108022 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107963

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107962 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107903

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107902 agccgacat 107894



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 135743 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 135802

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 135803 tcagtga 135809



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107814 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107755

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107754 tcagtga 107748



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 135320 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 135375

                   
Query: 73     ggtat 77
              |||||
Sbjct: 135376 ggtat 135380



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 108237 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 108182

                   
Query: 73     ggtat 77
              |||||
Sbjct: 108181 ggtat 108177

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134023 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134082

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134083 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134142

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134143 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134202

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134203 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134262

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134263 agccgacat 134271



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107013 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106954

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 106953 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106894

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106893 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106834

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106833 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106774

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 106773 agccgacat 106765



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134351 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 134410

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134411 tcagtga 134417



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106685 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 106626

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106625 tcagtga 106619



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 133928 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 133983

                   
Query: 73     ggtat 77
              |||||
Sbjct: 133984 ggtat 133988



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107108 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107053

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107052 ggtat 107048

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  454 bits (229), Expect = e-124
 Identities = 290/309 (93%), Gaps = 1/309 (0%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            ||||||||||||||| ||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctttcgtccttgaaccgataaccatctttcggcta 1960

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| |  || ||||||||||||||||||||||| ||||||||
Sbjct: 1959 acctagcctcctccgtccctcgggccctacaaggggtagtacaggaatattcacctgttg 1900

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1840

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1839 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1780

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 1779 agccgacat 1771



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1691 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 1632

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1631 tcagtga 1625



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 2124 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 2069

                           
Query: 62   ccgtagcgcctggta 76
            |||||||||||||||
Sbjct: 2068 ccgtagcgcctggta 2054

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134158 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134217

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134218 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134277

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134278 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134337

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134338 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134397

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134398 agccgacat 134406



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107185 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107126

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107125 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107066

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107065 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107006

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107005 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106946

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 106945 agccgacat 106937



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134486 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 134545

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134546 tcagtga 134552



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106857 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 106798

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106797 tcagtga 106791



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 134063 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134118

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134119 ggtat 134123



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107280 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107225

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107224 ggtat 107220

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134156 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134215

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134216 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134275

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134276 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134335

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134336 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134395

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134396 agccgacat 134404



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107182 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107123

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107122 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107063

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107062 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107003

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107002 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106943

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 106942 agccgacat 106934



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134484 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 134543

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134544 tcagtga 134550



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106854 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 106795

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106794 tcagtga 106788



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 134061 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134116

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134117 ggtat 134121



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107277 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107222

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107221 ggtat 107217

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134068 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134127

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134128 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134187

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134188 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134247

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134248 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134307

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134308 agccgacat 134316



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107060 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107001

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107000 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106941

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106940 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106881

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106821

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 106820 agccgacat 106812



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134396 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 134455

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134456 tcagtga 134462



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106732 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 106673

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106672 tcagtga 106666



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 133973 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134028

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134029 ggtat 134033



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107155 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107100

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107099 ggtat 107095

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 134657 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134716

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 134717 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134776

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134777 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134836

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134837 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134896

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134897 agccgacat 134905



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 107750 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107691

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107690 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107631

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107630 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107571

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107570 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107511

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107510 agccgacat 107502



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134985 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 135044

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 135045 tcagtga 135051



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107422 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107363

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107362 tcagtga 107356



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 134551 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 134606

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 134607 ccgtagcgcctggta 134621



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 107856 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 107801

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 107800 ccgtagcgcctggta 107786

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 129007 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 129066

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 129067 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 129126

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129127 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 129186

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| |||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 129187 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 129246

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 129247 agccgacat 129255



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 103449 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 103390

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 103389 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103330

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103329 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 103270

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| |||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 103269 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 103210

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 103209 agccgacat 103201



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 129335 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 129394

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 129395 tcagtga 129401



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 103121 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 103062

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 103061 tcagtga 103055



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 128901 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 128956

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 128957 ccgtagcgcctggta 128971



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 103555 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 103500

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 103499 ccgtagcgcctggta 103485

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134506 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134565

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134566 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134625

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134626 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134685

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134686 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134745

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134746 agccgacat 134754



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107632 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107573

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107572 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107513

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107512 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107453

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107452 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107393

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107392 agccgacat 107384



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134834 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 134893

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134894 tcagtga 134900



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107304 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107245

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107244 tcagtga 107238



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 134411 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134466

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134467 ggtat 134471



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107727 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107672

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107671 ggtat 107667

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134035 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134094

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134095 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134154

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134155 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134214

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134215 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134274

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 134275 agccgacat 134283



 Score =  454 bits (229), Expect = e-124
 Identities = 289/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107027 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106968

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 106967 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106908

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106907 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106848

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106847 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106788

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 106787 agccgacat 106779



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 134363 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 134422

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 134423 tcagtga 134429



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106699 acatcccacagcttcggcagaccgcttagccccgttcatcttcggcgcaagagcgctcga 106640

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106639 tcagtga 106633



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 133940 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 133995

                   
Query: 73     ggtat 77
              |||||
Sbjct: 133996 ggtat 134000



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107122 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107067

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107066 ggtat 107062

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  448 bits (226), Expect = e-123
 Identities = 290/310 (93%), Gaps = 1/310 (0%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| | ||||||| |||| |||| ||||||||||||||||||||
Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745

                                                                        
Query: 177  tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 235
            ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 5744 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 5685

                                                                        
Query: 236  aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 295
            |||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||
Sbjct: 5684 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 5625

                                                                        
Query: 296  gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 355
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5624 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 5565

                                                                        
Query: 356  cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 415
            |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 5564 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 5505

                      
Query: 416  aagccgacat 425
            ||||||||||
Sbjct: 5504 aagccgacat 5495



 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Minus

                                                                        
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 483
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 5413 atcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcgatc 5354

                 
Query: 484  agtga 488
            |||||
Sbjct: 5353 agtga 5349



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatc 44
            ||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 5850 ttttgtttaaggtcgttcgagcttttcttgggagtatggcatc 5808

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  448 bits (226), Expect = e-123
 Identities = 292/314 (92%), Gaps = 5/314 (1%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||| ||||||| ||||||||||
Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463

                                                                          
Query: 177    tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 231
              ||||||||||     |||||||| |||||||||| |||||| |||| |||||||||||||
Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 133523

                                                                          
Query: 232    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 291
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 133524 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 133583

                                                                          
Query: 292    tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 351
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133584 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 133643

                                                                          
Query: 352    gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 411
              |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 133644 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 133703

                            
Query: 412    actcaagccgacat 425
              ||||||||||||||
Sbjct: 133704 actcaagccgacat 133717



 Score =  448 bits (226), Expect = e-123
 Identities = 292/314 (92%), Gaps = 5/314 (1%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||| ||||||| ||||||||||
Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819

                                                                          
Query: 177    tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 231
              ||||||||||     |||||||| |||||||||| |||||| |||| |||||||||||||
Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 106759

                                                                          
Query: 232    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 291
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 106758 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 106699

                                                                          
Query: 292    tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 351
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106698 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 106639

                                                                          
Query: 352    gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 411
              |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 106638 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 106579

                            
Query: 412    actcaagccgacat 425
              ||||||||||||||
Sbjct: 106578 actcaagccgacat 106565



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 133796 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 133855

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 133856 tcagtga 133862



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 106486 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 106427

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 106426 tcagtga 106420



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 133358 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 133413

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 133414 ccgtagcgcctggta 133428



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 106924 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 106869

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 106868 ccgtagcgcctggta 106854

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  448 bits (226), Expect = e-123
 Identities = 290/310 (93%), Gaps = 1/310 (0%)
 Strand = Plus / Plus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||| | ||||| | ||||||| |||| |||| ||||||||||||||||||||
Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180

                                                                         
Query: 177   tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 235
             ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 22181 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 22240

                                                                         
Query: 236   aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 295
             |||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||
Sbjct: 22241 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 22300

                                                                         
Query: 296   gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 355
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22301 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 22360

                                                                         
Query: 356   cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 415
             |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22361 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 22420

                       
Query: 416   aagccgacat 425
             ||||||||||
Sbjct: 22421 aagccgacat 22430



 Score =  113 bits (57), Expect = 5e-22
 Identities = 63/65 (96%)
 Strand = Plus / Plus

                                                                         
Query: 424   atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 483
             ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 22512 atcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcgatc 22571

                  
Query: 484   agtga 488
             |||||
Sbjct: 22572 agtga 22576



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatc 44
             ||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 22075 ttttgtttaaggtcgttcgagcttttcttgggagtatggcatc 22117

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134777 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134836

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134837 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134896

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134897 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134956

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134957 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135016

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 135017 agccgacat 135025



 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107853 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107794

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107793 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107734

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107733 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107674

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107673 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107614

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107613 agccgacat 107605



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 135105 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 135164

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 135165 tcagtga 135171



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107525 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107466

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107465 tcagtga 107459



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 134682 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134737

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134738 ggtat 134742



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107948 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107893

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107892 ggtat 107888

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 3047 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 2988

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 2987 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 2928

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2927 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 2868

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2867 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 2808

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 2807 agccgacat 2799



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2719 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 2660

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 2659 tcagtga 2653



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                        
Query: 13   gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
            ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 3142 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 3087

                 
Query: 73   ggtat 77
            |||||
Sbjct: 3086 ggtat 3082

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            | |||||||||| |  | ||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1522 ttttaccctgaacacaccgggacaccttgcgtccttgaaccgataaccatctttcggcta 1463

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 1462 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1403

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1343

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1342 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 1283

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 1282 agccgacat 1274



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 1195 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 1136

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1135 atcagtga 1128



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 69/75 (92%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            ||||||||||||||||||||||||||||||||||||| |||| |||    ||||||||||
Sbjct: 1628 ttttgttgaaggtcgttcgagcttttcctgggagtatagcatgggt----tacttcagcg 1573

                           
Query: 62   ccgtagcgcctggta 76
            |||||||||||||||
Sbjct: 1572 ccgtagcgcctggta 1558

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 3292 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 3233

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 3232 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 3173

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3172 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 3113

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3112 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 3053

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 3052 agccgacat 3044



 Score =  115 bits (58), Expect = 1e-22
 Identities = 64/66 (96%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2964 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 2905

                  
Query: 482  tcagtg 487
            ||||||
Sbjct: 2904 tcagtg 2899



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                        
Query: 13   gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
            ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 3387 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 3332

                 
Query: 73   ggtat 77
            |||||
Sbjct: 3331 ggtat 3327

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134775 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134834

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134835 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134894

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134895 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134954

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134955 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135014

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 135015 agccgacat 135023



 Score =  446 bits (225), Expect = e-122
 Identities = 288/309 (93%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852

                                                                          
Query: 177    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107851 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107792

                                                                          
Query: 237    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107791 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107732

                                                                          
Query: 297    tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107731 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107672

                                                                          
Query: 357    ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
              ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 107671 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107612

                       
Query: 417    agccgacat 425
              |||||||||
Sbjct: 107611 agccgacat 107603



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 135103 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 135162

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 135163 tcagtga 135169



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 107523 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 107464

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 107463 tcagtga 107457



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Plus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 134680 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 134735

                   
Query: 73     ggtat 77
              |||||
Sbjct: 134736 ggtat 134740



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                          
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
              ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 107946 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 107891

                   
Query: 73     ggtat 77
              |||||
Sbjct: 107890 ggtat 107886

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  438 bits (221), Expect = e-120
 Identities = 292/314 (92%), Gaps = 5/314 (1%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578

                                                                          
Query: 177    tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 231
              |||||||||||||||    ||| |||||||||| |||||| |||| |||| ||| |||||
Sbjct: 140579 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 140638

                                                                          
Query: 232    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 291
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 140639 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 140698

                                                                          
Query: 292    tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 351
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140699 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 140758

                                                                          
Query: 352    gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 411
              |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 140759 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 140818

                            
Query: 412    actcaagccgacat 425
              ||||||||||||||
Sbjct: 140819 actcaagccgacat 140832



 Score =  438 bits (221), Expect = e-120
 Identities = 292/314 (92%), Gaps = 5/314 (1%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079

                                                                          
Query: 177    tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 231
              |||||||||||||||    ||| |||||||||| |||||| |||| |||| ||| |||||
Sbjct: 113078 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 113019

                                                                          
Query: 232    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 291
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 113018 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 112959

                                                                          
Query: 292    tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 351
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112958 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 112899

                                                                          
Query: 352    gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 411
              |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 112898 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 112839

                            
Query: 412    actcaagccgacat 425
              ||||||||||||||
Sbjct: 112838 actcaagccgacat 112825



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 140912 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 140971

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 140972 tcagtga 140978



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 112745 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 112686

                     
Query: 482    tcagtga 488
              |||||||
Sbjct: 112685 tcagtga 112679



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 140473 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 140528

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 140529 ccgtagcgcctggta 140543



 Score =  107 bits (54), Expect = 3e-20
 Identities = 70/75 (93%), Gaps = 4/75 (5%)
 Strand = Plus / Minus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||||||||||||||||||||||||||||||| |||    ||||||||||
Sbjct: 113184 ttttgttgaaggtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcg 113129

                             
Query: 62     ccgtagcgcctggta 76
              |||||||||||||||
Sbjct: 113128 ccgtagcgcctggta 113114

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
            genes, complete sequence; chloroplast
          Length = 3069

 Score =  424 bits (214), Expect = e-115
 Identities = 289/310 (93%), Gaps = 3/310 (0%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| |||| |||| || | ||||||||| |||||||||||||||
Sbjct: 1598 tacttcagcgccgtagcgcctggt-ctcgaacattggctcgaggtattttctctacccct 1540

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            |||||||||||||| |||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1539 tcttaccctgaaaa-gcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1481

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 1480 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1421

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccct-ccgtggacgaac 355
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1420 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctaccgtggacgaac 1361

                                                                        
Query: 356  cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 415
            |||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1360 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 1301

                      
Query: 416  aagccgacat 425
            ||||||||||
Sbjct: 1300 aagccgacat 1291



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||
Sbjct: 1211 acatcccacagcttcggcagatcacttagccccgttcatcttcggcgcaagagcgctcga 1152

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1151 tcagtga 1145



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 67/74 (90%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                        
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
            ||||||||||||||||||||||||||||||||||||||||   |||    ||||||||||
Sbjct: 1644 ttttgttgaaggtcgttcgagcttttcctgggagtatggctagggt----tacttcagcg 1589

                          
Query: 62   ccgtagcgcctggt 75
            ||||||||||||||
Sbjct: 1588 ccgtagcgcctggt 1575

---

>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene
           for chloroplast product
          Length = 1041

 Score =  424 bits (214), Expect = e-115
 Identities = 288/309 (93%), Gaps = 4/309 (1%)
 Strand = Plus / Minus

                                                                       
Query: 117 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
           ||||||||||||| |||||| |||||||| || | |||||||||||||||||||||||||
Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792

                                                                       
Query: 177 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
           | ||||||||||||||||||| |||| || |||||| |||| ||||||||||||||||||
Sbjct: 791 tattaccctgaaaaagcaggggcaccatgcgtccttgaaccgataaccatctttcggcta 732

                                                                       
Query: 237 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
           ||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 731 acctagcctcctccgtccctcgg-accaacaaagggtagtacaggaatattcacctgttg 673

                                                                       
Query: 297 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tccatcgactacg--tttcggcctgatcttaggccctgactcaccctccgtggacgaacc 615

                                                                       
Query: 357 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
           ||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct: 614 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 555

                    
Query: 417 agccgacat 425
           |||||||||
Sbjct: 554 agccgacat 546



 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 468 gacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcg 409

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 408 atcagtga 401



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 41/41 (100%)
 Strand = Plus / Minus

                                                    
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcat 43
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 tttgttgaaggtcgttcgagcttttcctgggagtatggcat 855

---

>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0075K12.8), mRNA
          Length = 858

 Score =  420 bits (212), Expect = e-114
 Identities = 218/220 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 639 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 698

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 699 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 758

                                                                       
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 agcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttac 818

                                                   
Query: 183 cctgaaaaagcagggtcaccttgtgtccttaaacctataa 222
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 cctgaaaaagcagggtcaccttgtgtccttaaacctataa 858

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  418 bits (211), Expect = e-114
 Identities = 275/295 (93%), Gaps = 1/295 (0%)
 Strand = Plus / Minus

                                                                        
Query: 131  agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 190
            ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606

                                                                        
Query: 191  agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 250
            ||||||| ||||||  || ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 1605 agcagggacaccttacgttcttgaaccgataaccatctttcggctaacctagcctcctcc 1546

                                                                        
Query: 251  gtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgc 310
            ||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||| ||
Sbjct: 1545 gtccctcgggaccaacaaggggcagtacaggaatattcacctgttgtccatcgacta-gc 1487

                                                                        
Query: 311  ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacc 370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1486 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaccc 1427

                                                                   
Query: 371  ttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            || ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1426 ttaggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 1372



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1292 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 1233

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1232 tcagtga 1226



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 37/38 (97%)
 Strand = Plus / Minus

                                                  
Query: 13   gtcgttcgagcttttcctgggagtatggcatcggttac 50
            ||||||||||||||||||||||||||||||| ||||||
Sbjct: 1713 gtcgttcgagcttttcctgggagtatggcatgggttac 1676

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  381 bits (192), Expect = e-102
 Identities = 254/271 (93%), Gaps = 4/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 159  ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 214
            ||||||||||||||||||| ||||||||||||||  |||||  ||||||| ||| ||| |
Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978

                                                                        
Query: 215  acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 274
            ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||
Sbjct: 5797 tcaccaatgttttcgttactcaagccgacat 5767



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5687 acatcccacagcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcga 5628

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 5627 tcagtga 5621



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 44
            |||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 6134 ttgttgtaggtcgttcgaacttttcctgggagtatggcatc 6094

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  381 bits (192), Expect = e-102
 Identities = 254/271 (93%), Gaps = 4/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 159  ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 214
            ||||||||||||||||||| ||||||||||||||  |||||  ||||||| ||| ||| |
Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978

                                                                        
Query: 215  acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 274
            ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||
Sbjct: 5797 tcaccaatgttttcgttactcaagccgacat 5767



 Score =  109 bits (55), Expect = 9e-21
 Identities = 64/67 (95%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5687 acatcccacagcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcga 5628

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 5627 tcagtga 5621



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatc 44
            |||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 6134 ttgttgtaggtcgttcgaacttttcctgggagtatggcatc 6094

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  371 bits (187), Expect = 1e-99
 Identities = 283/313 (90%), Gaps = 4/313 (1%)
 Strand = Plus / Plus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 51097 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 51156

                                                                         
Query: 177   t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 232
             |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 51157 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 51216

                                                                         
Query: 233   gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 292
             ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 51217 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 51276

                                                                         
Query: 293   gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 352
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51277 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 51336

                                                                         
Query: 353   aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 412
             ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 51337 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 51396

                          
Query: 413   ctcaagccgacat 425
             |||||||||||||
Sbjct: 51397 ctcaagccgacat 51409



 Score =  371 bits (187), Expect = 1e-99
 Identities = 283/313 (90%), Gaps = 4/313 (1%)
 Strand = Plus / Minus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 38731 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 38672

                                                                         
Query: 177   t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 232
             |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 38671 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 38612

                                                                         
Query: 233   gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 292
             ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 38611 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 38552

                                                                         
Query: 293   gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 352
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38551 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 38492

                                                                         
Query: 353   aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 412
             ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 38491 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 38432

                          
Query: 413   ctcaagccgacat 425
             |||||||||||||
Sbjct: 38431 ctcaagccgacat 38419



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                         
Query: 422   acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
             ||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 51489 acatcccacagcttcggcgaatcgcttagccccgttcatattcggcgcaagagcgctcga 51548

                  
Query: 482   tcagt 486
             |||||
Sbjct: 51549 tcagt 51553



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                         
Query: 422   acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
             ||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 38339 acatcccacagcttcggcgaatcgcttagccccgttcatattcggcgcaagagcgctcga 38280

                  
Query: 482   tcagt 486
             |||||
Sbjct: 38279 tcagt 38275



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Plus

                                                                         
Query: 10    aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
             |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||||
Sbjct: 51059 aaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcg 51114

                   
Query: 70    cctggt 75
             ||||||
Sbjct: 51115 cctggt 51120



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                         
Query: 10    aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
             |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||||
Sbjct: 38769 aaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcg 38714

                   
Query: 70    cctggt 75
             ||||||
Sbjct: 38713 cctggt 38708

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  371 bits (187), Expect = 1e-99
 Identities = 283/313 (90%), Gaps = 4/313 (1%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 5659 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 5600

                                                                        
Query: 177  t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 232
            |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 5599 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 5540

                                                                        
Query: 233  gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 292
            ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 5539 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 5480

                                                                        
Query: 293  gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 352
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5479 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 5420

                                                                        
Query: 353  aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 412
            ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 5419 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 5360

                         
Query: 413  ctcaagccgacat 425
            |||||||||||||
Sbjct: 5359 ctcaagccgacat 5347



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||  ||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 5267 acatcccacagcttcggcgaatcgcttagccccgttcatattcggcgcaagagcgctcga 5208

                 
Query: 482  tcagt 486
            |||||
Sbjct: 5207 tcagt 5203



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
            |||| ||||||||||||||| ||||||||||| | |||    ||||||||||||||||||
Sbjct: 5697 aaggccgttcgagcttttcccgggagtatggcgtgggt----tacttcagcgccgtagcg 5642

                  
Query: 70   cctggt 75
            ||||||
Sbjct: 5641 cctggt 5636

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  369 bits (186), Expect = 6e-99
 Identities = 254/274 (92%), Gaps = 2/274 (0%)
 Strand = Plus / Minus

                                                                        
Query: 152  ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtcct 211
            ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||
Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494

                                                                        
Query: 212  taaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 271
            | |||| |||||||||||| |||||||||||||| ||||||||||| | |||||||||||
Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggg 1434

                                                                        
Query: 272  gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 331
            ||||||||| |||||| |||||||| ||||||||||| | ||||||||||||||||||||
Sbjct: 1433 gtagtacagaaatattcacctgttgcccatcgactac-cgtttcggcctgatcttaggcc 1375

                                                                        
Query: 332  ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 391
            |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 1374 ctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcattgga 1315

                                              
Query: 392  ttctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||| ||||||||||||||||||
Sbjct: 1314 ttctcaccaatgtttgcgttactcaagccgacat 1281



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            |||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||
Sbjct: 1195 acatcccacagcttcggcggatcgcttagccccgttaatcttcggcgcaagagcgctcga 1136

                 
Query: 482  tcagt 486
            |||||
Sbjct: 1135 tcagt 1131



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
            |||||| ||||||||||||||||||||||||| | |||    |||||||||||||||| |
Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570

                  
Query: 70   cctggt 75
            ||||||
Sbjct: 1569 cctggt 1564

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  369 bits (186), Expect = 6e-99
 Identities = 216/226 (95%)
 Strand = Plus / Plus

                                                                          
Query: 200    accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
              |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997

                                                                          
Query: 260    taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
               |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 127057

                                                                          
Query: 320    tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
              |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 127058 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 127117

                                                            
Query: 380    cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 127118 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 127163



 Score =  369 bits (186), Expect = 6e-99
 Identities = 216/226 (95%)
 Strand = Plus / Minus

                                                                         
Query: 200   accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
             |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450

                                                                         
Query: 260   taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
              |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 96390

                                                                         
Query: 320   tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
             |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 96389 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 96330

                                                           
Query: 380   cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 96329 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 96284



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 61/69 (88%), Gaps = 4/69 (5%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              ||||||||||||||||||||||||| |||||||||| ||| |||    ||||||||||||
Sbjct: 126809 ttgttgaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgcc 126864

                       
Query: 64     gtagcgcct 72
               ||||||||
Sbjct: 126865 atagcgcct 126873



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 61/69 (88%), Gaps = 4/69 (5%)
 Strand = Plus / Minus

                                                                         
Query: 4     ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
             ||||||||||||||||||||||||| |||||||||| ||| |||    ||||||||||||
Sbjct: 96638 ttgttgaaggtcgttcgagcttttcttgggagtatgacatgggt----tacttcagcgcc 96583

                      
Query: 64    gtagcgcct 72
              ||||||||
Sbjct: 96582 atagcgcct 96574



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||||| |
Sbjct: 127242 gacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcgcttg 127301

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 127302 atcagtga 127309



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||||| |
Sbjct: 96205 gacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcgcttg 96146

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 96145 atcagtga 96138



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              |||||||||||   ||||| | || ||||||| | |||||||||||||||||| ||||||
Sbjct: 126853 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 126912

               
Query: 177    t 177
              |
Sbjct: 126913 t 126913



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             |||||||||||   ||||| | || ||||||| | |||||||||||||||||| ||||||
Sbjct: 96594 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 96535

              
Query: 177   t 177
             |
Sbjct: 96534 t 96534

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  361 bits (182), Expect = 1e-96
 Identities = 266/294 (90%), Gaps = 5/294 (1%)
 Strand = Plus / Plus

                                                                          
Query: 137    tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 196
              |||||||||||| | ||||| |||||||||||||||||||||||||| | |||||  | |
Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 145041

                                                                          
Query: 197    gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 251
              ||      |||||| |||||| |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 145042 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 145101

                                                                          
Query: 252    tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 311
              |||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 145102 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 145161

                                                                          
Query: 312    tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 371
              ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 145162 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 145221

                                                                    
Query: 372    tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
              | ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 145222 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 145275



 Score =  361 bits (182), Expect = 1e-96
 Identities = 266/294 (90%), Gaps = 5/294 (1%)
 Strand = Plus / Minus

                                                                          
Query: 137    tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 196
              |||||||||||| | ||||| |||||||||||||||||||||||||| | |||||  | |
Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 113421

                                                                          
Query: 197    gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 251
              ||      |||||| |||||| |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 113420 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 113361

                                                                          
Query: 252    tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 311
              |||||| | ||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 113360 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 113301

                                                                          
Query: 312    tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 371
              ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 113300 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 113241

                                                                    
Query: 372    tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
              | ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 113240 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 113187



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| |
Sbjct: 145354 gacatcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagagcgcttg 145413

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 145414 atcagtga 145421



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| |
Sbjct: 113108 gacatcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagagcgcttg 113049

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 113048 atcagtga 113041



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 6      gttgaaggtcgttcgagcttttcctgggagtatggcat 43
              ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 144920 gttgaaggtcgttcgagcttttcttgggagtgtggcat 144957



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 6      gttgaaggtcgttcgagcttttcctgggagtatggcat 43
              ||||||||||||||||||||||| ||||||| ||||||
Sbjct: 113542 gttgaaggtcgttcgagcttttcttgggagtgtggcat 113505

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3020

 Score =  361 bits (182), Expect = 1e-96
 Identities = 215/226 (95%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445

                                                                        
Query: 260  taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
             ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 1385

                                                                        
Query: 320  tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
            |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 1384 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1325

                                                          
Query: 380  cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1324 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 1279



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| |
Sbjct: 1200 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttg 1141

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1140 atcagtga 1133



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 139  gtactcggacctcggctcgaggcattttctctaccc 174
            |||||| ||| | |||||||||||||||||||||||
Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 12   ggtcgttcgagcttttcctgggagtatggcatcggttac 50
            ||||||||||||||||| ||| ||| |||||| ||||||
Sbjct: 1628 ggtcgttcgagcttttcttggaagtgtggcattggttac 1590

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  361 bits (182), Expect = 1e-96
 Identities = 215/226 (95%)
 Strand = Plus / Plus

                                                                          
Query: 200    accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
              |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704

                                                                          
Query: 260    taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
               ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 116764

                                                                          
Query: 320    tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
              |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 116765 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 116824

                                                            
Query: 380    cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 116825 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 116870



 Score =  361 bits (182), Expect = 1e-96
 Identities = 215/226 (95%)
 Strand = Plus / Minus

                                                                         
Query: 200   accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
             |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398

                                                                         
Query: 260   taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
              ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 91338

                                                                         
Query: 320   tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
             |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 91337 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 91278

                                                           
Query: 380   cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 91277 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 91232



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| |
Sbjct: 116949 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttg 117008

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 117009 atcagtga 117016



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| |
Sbjct: 91153 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttg 91094

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 91093 atcagtga 91086



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| |
Sbjct: 116557 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 116616

                     
Query: 177    tcttacc 183
              | |||||
Sbjct: 116617 ttttacc 116623



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| |
Sbjct: 91545 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 91486

                    
Query: 177   tcttacc 183
             | |||||
Sbjct: 91485 ttttacc 91479



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/73 (84%), Gaps = 4/73 (5%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              ||||| ||||||||||||||||||| ||| ||| |||||| | |    ||||||||| ||
Sbjct: 116513 ttgttaaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcacc 116568

                           
Query: 64     gtagcgcctggta 76
              |||||||||||||
Sbjct: 116569 gtagcgcctggta 116581



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 62/73 (84%), Gaps = 4/73 (5%)
 Strand = Plus / Minus

                                                                         
Query: 4     ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
             ||||| ||||||||||||||||||| ||| ||| |||||| | |    ||||||||| ||
Sbjct: 91589 ttgttaaaggtcgttcgagcttttcttggaagtgtggcattgat----tacttcagcacc 91534

                          
Query: 64    gtagcgcctggta 76
             |||||||||||||
Sbjct: 91533 gtagcgcctggta 91521

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  353 bits (178), Expect = 3e-94
 Identities = 214/226 (94%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429

                                                                        
Query: 260  taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
             |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||
Sbjct: 1428 gaccaacaaggggtagtacaggaatattcgcctgttgtccatcgactacgccttttggcc 1369

                                                                        
Query: 320  tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
            ||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct: 1368 tgatcttaggccctgactcaccctccgtggacgaaccttgcagaggaacccttaggtttt 1309

                                                          
Query: 380  cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1308 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 1263



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| |
Sbjct: 1184 gacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttg 1125

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1124 atcagtga 1117



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 173
            ||||||||| | | |||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggacgttggctcgaggcattttctctacc 1497



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 10   aaggtcgttcgagcttttcctgggagtatggcat 43
            ||||||||||||||||||| ||||||| ||||||
Sbjct: 1591 aaggtcgttcgagcttttcttgggagtgtggcat 1558

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  349 bits (176), Expect = 5e-93
 Identities = 216/228 (94%), Gaps = 1/228 (0%)
 Strand = Plus / Plus

                                                                          
Query: 198    tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
              ||||||||  ||||| |||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 114707 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 114765

                                                                          
Query: 258    cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
               | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 114766 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 114825

                                                                          
Query: 318    cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 114826 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 114885

                                                              
Query: 378    ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 114886 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 114933



 Score =  349 bits (176), Expect = 5e-93
 Identities = 216/228 (94%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                         
Query: 198   tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
             ||||||||  ||||| |||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 87413 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 87355

                                                                         
Query: 258   cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
              | |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 87354 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 87295

                                                                         
Query: 318   cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 87294 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 87235

                                                             
Query: 378   ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 87234 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 87187



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| |
Sbjct: 115011 gacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttg 115070

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 115071 atcagtga 115078



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| |
Sbjct: 87109 gacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttg 87050

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 87049 atcagtga 87042



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                      
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcat 43
              ||||| ||||||||||||||||||| ||||||| ||||||
Sbjct: 114576 ttgtttaaggtcgttcgagcttttcttgggagtgtggcat 114615



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                     
Query: 4     ttgttgaaggtcgttcgagcttttcctgggagtatggcat 43
             ||||| ||||||||||||||||||| ||||||| ||||||
Sbjct: 87544 ttgtttaaggtcgttcgagcttttcttgggagtgtggcat 87505



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 134    gcttggtactcggacctcggctcgaggcattttctctacc 173
              ||||||||||||||| | |||| || |||||||| |||||
Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 134   gcttggtactcggacctcggctcgaggcattttctctacc 173
             ||||||||||||||| | |||| || |||||||| |||||
Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  349 bits (176), Expect = 5e-93
 Identities = 278/311 (89%), Gaps = 2/311 (0%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533

                                                                        
Query: 177  tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 234
            || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473

                                                                        
Query: 235  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 294
            ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413

                                                                        
Query: 295  tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353

                                                                        
Query: 355  ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 414
            ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293

                       
Query: 415  caagccgacat 425
            |||||||||||
Sbjct: 1292 caagccgacat 1282



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 420  cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
            ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| 
Sbjct: 1204 cgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctt 1145

                     
Query: 480  gatcagtga 488
            |||||||||
Sbjct: 1144 gatcagtga 1136



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 63/74 (85%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
            ||||| ||||||||||||||||||| ||||||| ||||||  ||    ||||||||||||
Sbjct: 1636 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 1581

                          
Query: 64   gtagcgcctggtat 77
            ||||| ||| ||||
Sbjct: 1580 gtagcacctagtat 1567

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  349 bits (176), Expect = 5e-93
 Identities = 278/311 (89%), Gaps = 2/311 (0%)
 Strand = Plus / Plus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 149653 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 149712

                                                                          
Query: 177    tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 234
              || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 149713 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 149772

                                                                          
Query: 235    taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 294
              ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 149773 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 149832

                                                                          
Query: 295    tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 354
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 149892

                                                                          
Query: 355    ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 414
              ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 149893 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 149952

                         
Query: 415    caagccgacat 425
              |||||||||||
Sbjct: 149953 caagccgacat 149963



 Score =  349 bits (176), Expect = 5e-93
 Identities = 278/311 (89%), Gaps = 2/311 (0%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 119013 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 118954

                                                                          
Query: 177    tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 234
              || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 118953 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 118894

                                                                          
Query: 235    taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 294
              ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 118893 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 118834

                                                                          
Query: 295    tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 354
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 118774

                                                                          
Query: 355    ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 414
              ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 118773 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 118714

                         
Query: 415    caagccgacat 425
              |||||||||||
Sbjct: 118713 caagccgacat 118703



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                          
Query: 420    cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
              ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| 
Sbjct: 150041 cgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctt 150100

                       
Query: 480    gatcagtga 488
              |||||||||
Sbjct: 150101 gatcagtga 150109



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                          
Query: 420    cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
              ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| 
Sbjct: 118625 cgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctt 118566

                       
Query: 480    gatcagtga 488
              |||||||||
Sbjct: 118565 gatcagtga 118557



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 63/74 (85%), Gaps = 4/74 (5%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              ||||| ||||||||||||||||||| ||||||| ||||||  ||    ||||||||||||
Sbjct: 149609 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 149664

                            
Query: 64     gtagcgcctggtat 77
              ||||| ||| ||||
Sbjct: 149665 gtagcacctagtat 149678



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 63/74 (85%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                          
Query: 4      ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
              ||||| ||||||||||||||||||| ||||||| ||||||  ||    ||||||||||||
Sbjct: 119057 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 119002

                            
Query: 64     gtagcgcctggtat 77
              ||||| ||| ||||
Sbjct: 119001 gtagcacctagtat 118988

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete
            sequence
          Length = 3503

 Score =  349 bits (176), Expect = 5e-93
 Identities = 278/311 (89%), Gaps = 2/311 (0%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533

                                                                        
Query: 177  tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 234
            || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473

                                                                        
Query: 235  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 294
            ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413

                                                                        
Query: 295  tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 354
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353

                                                                        
Query: 355  ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 414
            ||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293

                       
Query: 415  caagccgacat 425
            |||||||||||
Sbjct: 1292 caagccgacat 1282



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 420  cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
            ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| 
Sbjct: 1204 cgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctt 1145

                     
Query: 480  gatcagtga 488
            |||||||||
Sbjct: 1144 gatcagtga 1136



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 63/74 (85%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
            ||||| ||||||||||||||||||| ||||||| ||||||  ||    ||||||||||||
Sbjct: 1636 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 1581

                          
Query: 64   gtagcgcctggtat 77
            ||||| ||| ||||
Sbjct: 1580 gtagcacctagtat 1567

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  347 bits (175), Expect = 2e-92
 Identities = 215/227 (94%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| |
Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446

                                                                        
Query: 260  taccaacaagggg-tagtacaggaatattgacctgttgtccatcgactacgcctttcggc 318
             |||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgttgtccatcgactacgcctttcggc 1386

                                                                        
Query: 319  ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 378
            ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 1385 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1326

                                                           
Query: 379  tcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1325 tcggggcattggattctcaccaatgtttgcgttactcaagccgacat 1279



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| |
Sbjct: 1200 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttg 1141

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1140 atcagtga 1133



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 65/73 (89%), Gaps = 4/73 (5%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
            ||||||||||||||||||||||||| ||||||| |||||| |||    ||||||||| ||
Sbjct: 1638 ttgttgaaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcagcacc 1583

                         
Query: 64   gtagcgcctggta 76
            |||||||||||||
Sbjct: 1582 gtagcgcctggta 1570



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||| | | ||||| |||||||||||| | |||| |||| |||||||||||||||
Sbjct: 1594 tacttcagcaccgtagcgcctggtactcggacgttggcttgaggtattttctctacccct 1535

                     
Query: 177  tcttaccct 185
             ||||||||
Sbjct: 1534 ccttaccct 1526

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  345 bits (174), Expect = 8e-92
 Identities = 213/226 (94%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338

                                                                        
Query: 260  taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
             |||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 5278

                                                                        
Query: 320  tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
            |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 5277 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 5218

                                                          
Query: 380  cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5217 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 5172



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 420  cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
            ||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| 
Sbjct: 5094 cgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctt 5035

                     
Query: 480  gatcagtga 488
            |||||||||
Sbjct: 5034 gatcagtga 5026



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 63/74 (85%), Gaps = 4/74 (5%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgcc 63
            ||||| ||||||||||||||||||| ||||||| ||||||  ||    ||||||||||||
Sbjct: 5526 ttgttaaaggtcgttcgagcttttcttgggagtgtggcatgagt----tacttcagcgcc 5471

                          
Query: 64   gtagcgcctggtat 77
            ||||| ||| ||||
Sbjct: 5470 gtagcacctagtat 5457

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  345 bits (174), Expect = 8e-92
 Identities = 207/218 (94%)
 Strand = Plus / Minus

                                                                        
Query: 208  tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 267
            ||||| |||| ||||||||||||||||||||||||||| ||||||||||| | |||| ||
Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgggaccagca 1441

                                                                        
Query: 268  aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
            ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 1440 aggggtagtacaggaatattcgcctgttgtccatcgactacgcctttcggcctgatctta 1381

                                                                        
Query: 328  ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
            |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1380 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1321

                                                  
Query: 388  tggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||| ||||||||||||||||||
Sbjct: 1320 tggattctcaccaatgtttgcgttactcaagccgacat 1283



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| |
Sbjct: 1204 gacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttg 1145

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1144 atcagtga 1137



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 10   aaggtcgttcgagcttttcctgggagtatggcat 43
            |||||||||||||||||||  |||||| ||||||
Sbjct: 1636 aaggtcgttcgagcttttctcgggagtgtggcat 1603

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  341 bits (172), Expect = 1e-90
 Identities = 284/316 (89%), Gaps = 9/316 (2%)
 Strand = Plus / Plus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | |||||||| |||||||  || ||| |||||||||||||||||||||
Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033

                                                                        
Query: 177  tcttaccct----gaaaaa--gcagggtcaccttgtgtccttaaacctataaccatcttt 230
            ||| |||||    ||||||  ||| |||||||||| |||||| |||| |||||||| |||
Sbjct: 5034 tctgaccctccctgaaaaaaggcaaggtcaccttgcgtccttgaaccgataaccattttt 5093

                                                                        
Query: 231  cggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgac 290
            ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||| ||
Sbjct: 5094 cggctaacctagcctcctccgtccctcgggaccaacaaaggatagtacaggaatattcac 5153

                                                                        
Query: 291  ctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg-tgg 349
            ||||||||||||||| || | ||||||||||||||||||||||||||||||| ||| |||
Sbjct: 5154 ctgttgtccatcgacaac-cgtttcggcctgatcttaggccctgactcaccccccgttgg 5212

                                                                        
Query: 350  acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 409
            |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 5213 acgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcg 5272

                            
Query: 410  ttactcaagccgacat 425
            ||||||||||||||||
Sbjct: 5273 ttactcaagccgacat 5288



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                        
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 483
            ||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||
Sbjct: 5370 atcccacagcttcggcagatcgcttagtcccgttcatcttcggtgcaagagcgctcgatc 5429

               
Query: 484  agt 486
            |||
Sbjct: 5430 agt 5432



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                 
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtat 38
            |||||||||||||||||||||||||||||||||||||
Sbjct: 4929 ttttgttgaaggtcgttcgagcttttcctgggagtat 4965

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA
            gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  341 bits (172), Expect = 1e-90
 Identities = 268/296 (90%), Gaps = 8/296 (2%)
 Strand = Plus / Minus

                                                                        
Query: 117  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984

                                                                        
Query: 177  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 236
            |||||||||| ||| |||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 983  tcttaccctgcaaa-gcagggacaccttacgttcttgaaccgataaccatctttcggcta 925

                                                                        
Query: 237  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 296
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 924  acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 865

                                                                        
Query: 297  tccatcgactacgcctttcggcctga--tc----ttaggccctgactcaccctccgtgga 350
            ||||||||||||||||||||| ||||  ||    ||||||||||||||||||||||||||
Sbjct: 864  tccatcgactacgcctttcgg-ctgacgtcacgtttaggccctgactcaccctccgtgga 806

                                                                    
Query: 351  cgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 406
            ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 805  cgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgttt 750



 Score =  117 bits (59), Expect = 4e-23
 Identities = 65/67 (97%)
 Strand = Plus / Minus

                                                                       
Query: 422 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
           ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 655 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 596

                  
Query: 482 tcagtga 488
           |||||||
Sbjct: 595 tcagtga 589



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 60/65 (92%), Gaps = 4/65 (6%)
 Strand = Plus / Minus

                                                                        
Query: 13   gtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 72
            ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||
Sbjct: 1078 gtcgttcgagcttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcct 1023

                 
Query: 73   ggtat 77
            |||||
Sbjct: 1022 ggtat 1018



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 42/42 (100%)
 Strand = Plus / Minus

                                                      
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcat 43
            ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1666 ttttgttgaaggtcgttcgagcttttcctgggagtatggcat 1625

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  323 bits (163), Expect = 3e-85
 Identities = 205/219 (93%)
 Strand = Plus / Minus

                                                                          
Query: 207    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 266
              |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct: 145425 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 145366

                                                                          
Query: 267    aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 326
              |||||| ||||| |||||||| ||| |||||||||| ||||||||| |||||||||||||
Sbjct: 145365 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 145306

                                                                          
Query: 327    aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 386
              ||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 145305 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 145246

                                                     
Query: 387    ttggattctcaccaatgttttcgttactcaagccgacat 425
              |||||||||||||||||||||||||||||||||||||||
Sbjct: 145245 ttggattctcaccaatgttttcgttactcaagccgacat 145207



 Score =  323 bits (163), Expect = 3e-85
 Identities = 205/219 (93%)
 Strand = Plus / Plus

                                                                         
Query: 207   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 266
             |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct: 87426 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 87485

                                                                         
Query: 267   aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 326
             |||||| ||||| |||||||| ||| |||||||||| ||||||||| |||||||||||||
Sbjct: 87486 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 87545

                                                                         
Query: 327   aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 386
             ||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct: 87546 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 87605

                                                    
Query: 387   ttggattctcaccaatgttttcgttactcaagccgacat 425
             |||||||||||||||||||||||||||||||||||||||
Sbjct: 87606 ttggattctcaccaatgttttcgttactcaagccgacat 87644



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |
Sbjct: 145128 gacatcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttg 145069

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 145068 atcagtga 145061



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |
Sbjct: 87723 gacatcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttg 87782

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 87783 atcagtga 87790



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                          
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
              |||||| |||| | ||||| | |||||||||| | |||||||||||||||||||||||||
Sbjct: 145503 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 145444



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             |||||| |||| | ||||| | |||||||||| | |||||||||||||||||||||||||
Sbjct: 87348 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 87407



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 55/63 (87%), Gaps = 4/63 (6%)
 Strand = Plus / Minus

                                                                          
Query: 10     aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
              ||||||||||||||||||| ||||||| |||||| |||    |||||| |||||||||||
Sbjct: 145541 aaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcg 145486

                 
Query: 70     cct 72
              |||
Sbjct: 145485 cct 145483



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 55/63 (87%), Gaps = 4/63 (6%)
 Strand = Plus / Plus

                                                                         
Query: 10    aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 69
             ||||||||||||||||||| ||||||| |||||| |||    |||||| |||||||||||
Sbjct: 87310 aaggtcgttcgagcttttcttgggagtgtggcatgggt----tacttcggcgccgtagcg 87365

                
Query: 70    cct 72
             |||
Sbjct: 87366 cct 87368

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  311 bits (157), Expect = 1e-81
 Identities = 204/217 (94%), Gaps = 2/217 (0%)
 Strand = Plus / Plus

                                                                          
Query: 209    ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 267
              |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| 
Sbjct: 137767 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 137825

                                                                          
Query: 268    aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
              | ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||
Sbjct: 137826 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 137885

                                                                          
Query: 328    ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
              |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 137886 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 137945

                                                   
Query: 388    tggattctcaccaatgttttcgttactcaagccgaca 424
              ||||||||||||||||||| |||||||||||||||||
Sbjct: 137946 tggattctcaccaatgtttgcgttactcaagccgaca 137982



 Score =  311 bits (157), Expect = 1e-81
 Identities = 204/217 (94%), Gaps = 2/217 (0%)
 Strand = Plus / Minus

                                                                         
Query: 209   ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 267
             |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| 
Sbjct: 84110 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 84052

                                                                         
Query: 268   aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
             | ||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||
Sbjct: 84051 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 83992

                                                                         
Query: 328   ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 83991 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 83932

                                                  
Query: 388   tggattctcaccaatgttttcgttactcaagccgaca 424
             ||||||||||||||||||| |||||||||||||||||
Sbjct: 83931 tggattctcaccaatgtttgcgttactcaagccgaca 83895



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                          
Query: 420    cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
              ||||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| 
Sbjct: 138066 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 138125

                       
Query: 480    gatcagtga 488
              |||||||||
Sbjct: 138126 gatcagtga 138134



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                         
Query: 420   cgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 479
             ||||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| 
Sbjct: 83811 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 83752

                      
Query: 480   gatcagtga 488
             |||||||||
Sbjct: 83751 gatcagtga 83743



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 117    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 175
              ||||||||||| | ||||| || ||||||||| | ||||||||||||| ||||||||||
Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 59/68 (86%), Gaps = 4/68 (5%)
 Strand = Plus / Plus

                                                                          
Query: 6      gttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgt 65
              ||||||||||||||| ||||||| ||||||| ||||||  ||    ||||||||||||||
Sbjct: 137631 gttgaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgt 137686

                      
Query: 66     agcgcctg 73
              ||||||||
Sbjct: 137687 agcgcctg 137694



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 59/68 (86%), Gaps = 4/68 (5%)
 Strand = Plus / Minus

                                                                         
Query: 6     gttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgt 65
             ||||||||||||||| ||||||| ||||||| ||||||  ||    ||||||||||||||
Sbjct: 84246 gttgaaggtcgttcgggcttttcttgggagtgtggcatgagt----tacttcagcgccgt 84191

                     
Query: 66    agcgcctg 73
             ||||||||
Sbjct: 84190 agcgcctg 84183



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 175
             ||||||||||| | ||||| || ||||||||| | ||||||||||||| ||||||||||
Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146

---

>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full
           insert sequence
          Length = 425

 Score =  311 bits (157), Expect = 1e-81
 Identities = 163/165 (98%)
 Strand = Plus / Minus

                                                                       
Query: 3   tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 165 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 106

                                                                       
Query: 63  cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatacttc 122
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 105 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggctcatacttc 46

                                                        
Query: 123 agcgctgcagcgcttggtactcggacctcggctcgaggcattttc 167
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  agcgctgcagcgcttggtactcggacctcggctcgaggcattttc 1

---

>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full
           insert sequence
          Length = 1663

 Score =  307 bits (155), Expect = 2e-80
 Identities = 155/155 (100%)
 Strand = Plus / Minus

                                                                       
Query: 271 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 388

                                                                       
Query: 331 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 328

                                              
Query: 391 attctcaccaatgttttcgttactcaagccgacat 425
           |||||||||||||||||||||||||||||||||||
Sbjct: 327 attctcaccaatgttttcgttactcaagccgacat 293



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 155

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 154 atcagtga 147

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  301 bits (152), Expect = 1e-78
 Identities = 209/228 (91%)
 Strand = Plus / Minus

                                                                        
Query: 198  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
            ||||||||| ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 1505 tcaccttgtatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446

                                                                        
Query: 258  cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
             | || || ||||||| |||||||||||||  ||||||||||||||||| ||||||||||
Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386

                                                                        
Query: 318  cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
            ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326

                                                            
Query: 378  ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 1278



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||
Sbjct: 1198 acatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttga 1139

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1138 tcagtga 1132

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  293 bits (148), Expect = 3e-76
 Identities = 208/228 (91%)
 Strand = Plus / Minus

                                                                        
Query: 198  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
            ||||||||  ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 5538 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 5479

                                                                        
Query: 258  cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
             | || || ||||||| |||||||||||||  ||||||||||||||||| ||||||||||
Sbjct: 5478 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 5419

                                                                        
Query: 318  cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
            ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 5418 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 5359

                                                            
Query: 378  ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5358 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 5311



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||
Sbjct: 5231 acatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttga 5172

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 5171 tcagtga 5165

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3257

 Score =  293 bits (148), Expect = 3e-76
 Identities = 208/228 (91%)
 Strand = Plus / Minus

                                                                        
Query: 198  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
            ||||||||  ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 1505 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446

                                                                        
Query: 258  cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
             | || || ||||||| |||||||||||||  ||||||||||||||||| ||||||||||
Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386

                                                                        
Query: 318  cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
            ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326

                                                            
Query: 378  ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacat 1278



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 62/67 (92%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||| ||
Sbjct: 1198 acatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgcttga 1139

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1138 tcagtga 1132

---

>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA
          Length = 519

 Score =  287 bits (145), Expect = 2e-74
 Identities = 148/149 (99%)
 Strand = Plus / Plus

                                                                       
Query: 277 acaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgac 336
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1   acaggaatattgacctgttgtccatcgagtacgcctttcggcctgatcttaggccctgac 60

                                                                       
Query: 337 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 120

                                        
Query: 397 accaatgttttcgttactcaagccgacat 425
           |||||||||||||||||||||||||||||
Sbjct: 121 accaatgttttcgttactcaagccgacat 149



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 287

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 288 atcagtga 295

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3349

 Score =  285 bits (144), Expect = 7e-74
 Identities = 207/228 (90%)
 Strand = Plus / Minus

                                                                        
Query: 198  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 257
            ||||||||| ||||| |||| || ||||| ||||||| || ||||||| |||||||||||
Sbjct: 1500 tcaccttgtatccttgaaccgatcaccatttttcggccaatctagccttctccgtccctc 1441

                                                                        
Query: 258  cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 317
             | || || ||||||| |||||||||||||  ||||||||||||||||| ||||||||||
Sbjct: 1440 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1381

                                                                        
Query: 318  cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 377
            ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1380 cctaatcttaggccctgactaaccctccgtggacgaaccttgcggaggaacccttaggtt 1321

                                                            
Query: 378  ttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1320 ttcggggcattggattctcaccaatgtttccgttactcaagccgacat 1273



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 423  catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 482
            |||||||||||||||||||| ||||||| ||| ||||||||| |||| || ||||| |||
Sbjct: 1192 catcccacagcttcggcagaccgcttagtcccattcatcttcggcgcgagagcgcttgat 1133

                  
Query: 483  cagtga 488
            ||||||
Sbjct: 1132 cagtga 1127

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
            (rrl) gene, complete sequence; chloroplast gene for
            chloroplast product
          Length = 2875

 Score =  281 bits (142), Expect = 1e-72
 Identities = 200/218 (91%), Gaps = 1/218 (0%)
 Strand = Plus / Minus

                                                                        
Query: 209  ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 268
            |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 1481 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 1422

                                                                        
Query: 269  ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
                || ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 1421 ataagtggtacaggaatattaacctgttgtccatcgactgcgcctttcggcctcatctta 1362

                                                                        
Query: 328  ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
            |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 1361 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1302

                                                  
Query: 388  tggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||| ||||||||||||||||||
Sbjct: 1301 tggattctcaccaatgtttgcgttactcaagccgacat 1264



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 1183 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 1124

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1123 atcagtga 1116



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 13   gtcgttcgagcttttcctgggagtatggcatcggttac 50
            |||||||||||||||| |||||||||||||| ||||||
Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 153  gctcgaggcattttctctacc 173
            |||||||||||||||||||||
Sbjct: 1518 gctcgaggcattttctctacc 1498

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  281 bits (142), Expect = 1e-72
 Identities = 200/218 (91%), Gaps = 1/218 (0%)
 Strand = Plus / Plus

                                                                          
Query: 209    ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 268
              |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 123784 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 123843

                                                                          
Query: 269    ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
                  || ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 123844 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 123903

                                                                          
Query: 328    ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
              |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 123904 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 123963

                                                    
Query: 388    tggattctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||||| ||||||||||||||||||
Sbjct: 123964 tggattctcaccaatgtttgcgttactcaagccgacat 124001



 Score =  281 bits (142), Expect = 1e-72
 Identities = 200/218 (91%), Gaps = 1/218 (0%)
 Strand = Plus / Minus

                                                                         
Query: 209   ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 268
             |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 96082 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 96023

                                                                         
Query: 269   ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
                 || ||||||||||||| |||||||||||||||||| ||||||||||||| ||||||
Sbjct: 96022 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 95963

                                                                         
Query: 328   ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
             |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 95962 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 95903

                                                   
Query: 388   tggattctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||||| ||||||||||||||||||
Sbjct: 95902 tggattctcaccaatgtttgcgttactcaagccgacat 95865



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 124082 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 124141

                      
Query: 481    atcagtga 488
              ||||||||
Sbjct: 124142 atcagtga 124149



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 95784 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 95725

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 95724 atcagtga 95717



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 13     gtcgttcgagcttttcctgggagtatggcatcggttac 50
              |||||||||||||||| |||||||||||||| ||||||
Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 13    gtcgttcgagcttttcctgggagtatggcatcggttac 50
             |||||||||||||||| |||||||||||||| ||||||
Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 153    gctcgaggcattttctctacc 173
              |||||||||||||||||||||
Sbjct: 123747 gctcgaggcattttctctacc 123767



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   gctcgaggcattttctctacc 173
             |||||||||||||||||||||
Sbjct: 96119 gctcgaggcattttctctacc 96099

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  270 bits (136), Expect = 4e-69
 Identities = 184/199 (92%), Gaps = 2/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 229  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 286
            |||||||| | ||||||||||||||||||    | || |||||||||||||||||||| |
Sbjct: 1577 ttcggctagcttagcctcctccgtccctcttattgccgacaaggggtagtacaggaatct 1518

                                                                        
Query: 287  tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 346
            |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 1517 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1458

                                                                        
Query: 347  tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 406
            ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1457 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1398

                               
Query: 407  tcgttactcaagccgacat 425
             ||||||||||||||||||
Sbjct: 1397 gcgttactcaagccgacat 1379



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 1298 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 1239

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1238 atcagtga 1231

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  254 bits (128), Expect = 2e-64
 Identities = 182/199 (91%), Gaps = 2/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 229  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 286
            |||||||| | ||||||||||||||||||    | || | |||| ||||||||||||| |
Sbjct: 1460 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1401

                                                                        
Query: 287  tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 346
            |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 1400 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1341

                                                                        
Query: 347  tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 406
            ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1281

                               
Query: 407  tcgttactcaagccgacat 425
             ||||||||||||||||||
Sbjct: 1280 gcgttactcaagccgacat 1262



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 1181 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 1122

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1121 atcagtga 1114

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  254 bits (128), Expect = 2e-64
 Identities = 182/199 (91%), Gaps = 2/199 (1%)
 Strand = Plus / Minus

                                                                        
Query: 229  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 286
            |||||||| | ||||||||||||||||||    | || | |||| ||||||||||||| |
Sbjct: 1473 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1414

                                                                        
Query: 287  tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 346
            |||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||
Sbjct: 1413 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1354

                                                                        
Query: 347  tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 406
            ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1294

                               
Query: 407  tcgttactcaagccgacat 425
             ||||||||||||||||||
Sbjct: 1293 gcgttactcaagccgacat 1275



 Score =  103 bits (52), Expect = 5e-19
 Identities = 64/68 (94%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||
Sbjct: 1194 gacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcg 1135

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1134 atcagtga 1127

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2888

 Score =  242 bits (122), Expect = 9e-61
 Identities = 200/226 (88%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            ||||||| |||||||||| ||||||||| ||||| |||| |||||| ||||||||||| |
Sbjct: 1484 accttgtatccttaaaccgataaccatcattcggataacttagccttctccgtccctcag 1425

                                                                        
Query: 260  taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 319
                || || |  | ||||||||||||| ||| ||| |||||||| | ||||| ||||||
Sbjct: 1424 agttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctgtcggcc 1365

                                                                        
Query: 320  tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 379
            | |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 1364 tcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1305

                                                          
Query: 380  cggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1304 cggggcattggattctcaccaatgtttgcgttactcaagccgacat 1259



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| ||||| ||
Sbjct: 1180 acatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagcgcttga 1121

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1120 tcagtga 1114

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  236 bits (119), Expect = 6e-59
 Identities = 202/227 (88%), Gaps = 2/227 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| ||
Sbjct: 4519 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 4461

                                                                        
Query: 260  tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 318
            ||   || || |  | ||||||||||||||||| ||| |||||||| | |||||||||||
Sbjct: 4460 tagttaataaagaatggtacaggaatattgaccagttatccatcgattgcgcctttcggc 4401

                                                                        
Query: 319  ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 378
            || |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 4400 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 4341

                                                           
Query: 379  tcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 4340 tcggggcattggattcccaccaatgtttgcgttactcaagccgacat 4294



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| ||||| ||
Sbjct: 4214 acatcccacagtttcggcaaatcgcttagtcccgttcatcttcggcgcaagagcgcttga 4155

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 4154 tcagtga 4148

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score =  234 bits (118), Expect = 2e-58
 Identities = 217/250 (86%)
 Strand = Plus / Plus

                                                                        
Query: 118  acttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 177
            |||||| || || ||||| ||||||||| || | |||| |||| ||||||||||||||||
Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292

                                                                        
Query: 178  cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaa 237
             | ||| | |||||  |||| |||||||  ||||| |||| |||||||| |||| |||||
Sbjct: 2293 ttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttttctgctaa 2352

                                                                        
Query: 238  cctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgt 297
            ||||||||||||||| |||| | ||||||||| |||||||| |||||||| |||| ||||
Sbjct: 2353 cctagcctcctccgtacctcgggaccaacaagaggtagtactggaatattcacctcttgt 2412

                                                                        
Query: 298  ccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacct 357
            ||||||||||| ||||||||||| |||||||||||| |||||||||||||||| ||||||
Sbjct: 2413 ccatcgactacacctttcggcctaatcttaggccctaactcaccctccgtggatgaacct 2472

                      
Query: 358  tgcggaggaa 367
            ||||||||||
Sbjct: 2473 tgcggaggaa 2482



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Plus

                                                      
Query: 2    ttttgttgaaggtcgttcgagcttttcctgggagtatggcat 43
            ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2186 ttttgttgaaggtcgttcgagcttttcctaggagtatggcat 2227



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            ||||||||| ||||||  |||||||||||||||  ||||||||  | ||||| |||||||
Sbjct: 2625 gacatcccatagcttcaacagatcgcttagcccaattcatctttggtgcaagtgcgctcg 2684

                    
Query: 481  atcagtga 488
            || |||||
Sbjct: 2685 attagtga 2692



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                           
Query: 376  ttttcggggcattggattctcaccaatgttt 406
            ||||| |||||||||||||||||||||||||
Sbjct: 2497 ttttcagggcattggattctcaccaatgttt 2527

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score =  230 bits (116), Expect = 3e-57
 Identities = 143/152 (94%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 1451 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 1392

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 1391 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 1332

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1331 ctcaccaatgttttcgttactcaagccgacat 1300



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 428  cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 487
            |||||||||||||||  |||||| ||||||||| ||  ||||||| ||||| || |||||
Sbjct: 1194 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 1135

             
Query: 488  a 488
            |
Sbjct: 1134 a 1134

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score =  230 bits (116), Expect = 3e-57
 Identities = 143/152 (94%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 3220 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 3161

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 3160 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 3101

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 3100 ctcaccaatgttttcgttactcaagccgacat 3069



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 428  cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 487
            |||||||||||||||  |||||| ||||||||| ||  ||||||| ||||| || |||||
Sbjct: 2963 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 2904

             
Query: 488  a 488
            |
Sbjct: 2903 a 2903

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2886

 Score =  228 bits (115), Expect = 1e-56
 Identities = 201/227 (88%), Gaps = 2/227 (0%)
 Strand = Plus / Minus

                                                                        
Query: 200  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 259
            ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| ||
Sbjct: 1485 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 1427

                                                                        
Query: 260  tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 318
            ||   || || |  | ||||||||||||| ||| ||| |||||||| | |||||||||||
Sbjct: 1426 tagttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctttcggc 1367

                                                                        
Query: 319  ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 378
            || |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 1366 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1307

                                                           
Query: 379  tcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 1306 tcggggcattggattcccaccaatgtttgcgttactcaagccgacat 1260



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| ||||| ||
Sbjct: 1180 acatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagcgcttga 1121

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1120 tcagtga 1114

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2571

 Score =  216 bits (109), Expect = 5e-53
 Identities = 142/153 (92%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||||||||||| |||||||||||||||   |||||| ||
Sbjct: 1416 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 1357

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||
Sbjct: 1356 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 1297

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||| |||||||||||||||
Sbjct: 1296 tctcaccaatgttttcgctactcaagccgacat 1264



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||| ||||||||||||||  ||||||| ||||| ||| ||| ||||||| ||||| |
Sbjct: 1181 gacatctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttg 1122

                    
Query: 481  atcagtga 488
            | ||||||
Sbjct: 1121 accagtga 1114

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  216 bits (109), Expect = 5e-53
 Identities = 142/153 (92%)
 Strand = Plus / Plus

                                                                          
Query: 273    tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
              ||||||||||||||| |||||||||||||||| |||||||||||||||   |||||| ||
Sbjct: 114246 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 114305

                                                                          
Query: 333    tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
              ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||
Sbjct: 114306 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 114365

                                               
Query: 393    tctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||| |||||||||||||||
Sbjct: 114366 tctcaccaatgttttcgctactcaagccgacat 114398



 Score =  216 bits (109), Expect = 5e-53
 Identities = 142/153 (92%)
 Strand = Plus / Minus

                                                                         
Query: 273   tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
             ||||||||||||||| |||||||||||||||| |||||||||||||||   |||||| ||
Sbjct: 87742 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 87683

                                                                         
Query: 333   tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
             ||||| ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||
Sbjct: 87682 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 87623

                                              
Query: 393   tctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||| |||||||||||||||
Sbjct: 87622 tctcaccaatgttttcgctactcaagccgacat 87590



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                          
Query: 421    gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
              |||||| ||||||||||||||  ||||||| ||||| ||| ||| ||||||| ||||| |
Sbjct: 114481 gacatctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttg 114540

                      
Query: 481    atcagtga 488
              | ||||||
Sbjct: 114541 accagtga 114548



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             |||||| ||||||||||||||  ||||||| ||||| ||| ||| ||||||| ||||| |
Sbjct: 87507 gacatctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttg 87448

                     
Query: 481   atcagtga 488
             | ||||||
Sbjct: 87447 accagtga 87440

---

>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full
           insert sequence
          Length = 819

 Score =  216 bits (109), Expect = 5e-53
 Identities = 109/109 (100%)
 Strand = Plus / Minus

                                                                       
Query: 317 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 376
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 748

                                                            
Query: 377 tttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttcggggcattggattctcaccaatgttttcgttactcaagccgacat 699



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 561

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 560 atcagtga 553

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
            sequence; chloroplast
          Length = 2661

 Score =  214 bits (108), Expect = 2e-52
 Identities = 141/152 (92%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| ||||||||||||||||||||||||   ||||||||||
Sbjct: 1437 agtacaggaatattaacctgttttccatcgactacgcctttcggcctcgccttaggccct 1378

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1377 gactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1318

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| ||||||||||||||||||
Sbjct: 1317 ctcaccaatgtttgcgttactcaagccgacat 1286



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 428  cacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
            ||||||||||||||  ||||||| ||||||||| ||| |||||||
Sbjct: 1182 cacagcttcggcaggccgcttagtcccgttcattttcggcgcaag 1138

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2737

 Score =  210 bits (106), Expect = 3e-51
 Identities = 190/218 (87%), Gaps = 5/218 (2%)
 Strand = Plus / Minus

                                                                        
Query: 208  tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 267
            ||||| ||||||||||||| ||| || ||||||||||| ||||||||||| | |     |
Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccctcggga-----a 1443

                                                                        
Query: 268  aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
             ||||||||| ||||||||| |||| ||||||||| ||||  |||||| |  ||||||||
Sbjct: 1442 gggggtagtataggaatattaacctattgtccatcaactaaacctttcagtatgatctta 1383

                                                                        
Query: 328  ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 387
            || ||||||||||||| ||||||||||||||||| ||||| |||| ||||||||||||||
Sbjct: 1382 ggacctgactcaccctacgtggacgaaccttgcgaaggaacccttaggttttcggggcat 1323

                                                  
Query: 388  tggattctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||| ||||||||||||||||||
Sbjct: 1322 tggattctcaccaatgtttgcgttactcaagccgacat 1285



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            |||||||||||||||||| | |||||||  ||| ||||| ||| ||||||| ||||||||
Sbjct: 1201 acatcccacagcttcggcgggtcgcttattcccattcatattcggcgcaagagcgctcga 1142

                 
Query: 482  tcagt 486
            |||||
Sbjct: 1141 tcagt 1137



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 17   ttcgagcttttcctgggagtatggcat 43
            |||||||||||||||||||||| ||||
Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 153  gctcgaggcattttctctaccccttc 178
            ||||||||||||||||||||| ||||
Sbjct: 1534 gctcgaggcattttctctacctcttc 1509

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2834

 Score =  208 bits (105), Expect = 1e-50
 Identities = 141/153 (92%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| ||||||| ||||||||| |||||||||||||||  |||||| ||
Sbjct: 1602 tagtacaggaatattaacctgttttccatcgacgacgcctttcggcctggccttaggtcc 1543

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 1542 tgactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1483

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||| ||||||||||||||||||
Sbjct: 1482 tctcaccaatgtttgcgttactcaagccgacat 1450



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 426  cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
            ||||||||||||||||  ||||||| ||||||||| ||| |||||||
Sbjct: 1247 cccacagcttcggcaggccgcttagtcccgttcattttcggcgcaag 1201

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 7514

 Score =  206 bits (104), Expect = 5e-50
 Identities = 140/152 (92%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 1632 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1573

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1572 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1513

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1512 ctcaccaatgttttcgttactcaagccgacat 1481



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
            ||||||||||||||||||| ||||||| ||||||||| ||| |||||||
Sbjct: 1329 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaag 1281

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  206 bits (104), Expect = 5e-50
 Identities = 137/148 (92%)
 Strand = Plus / Minus

                                                                        
Query: 278  caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 337
            |||||||||| ||||| |  ||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1408 caggaatattaacctgatagccatcgactacgcctttcggccttatcttaggacctgact 1349

                                                                        
Query: 338  caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 397
            |||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||||
Sbjct: 1348 caccctccgtggacgagccttgcggaggaacccttagggtttcggggcattggattctca 1289

                                        
Query: 398  ccaatgttttcgttactcaagccgacat 425
            |||||||||||| |||||||||||||||
Sbjct: 1288 ccaatgttttcgctactcaagccgacat 1261



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 231  cggctaacctagcctcctccgtccctc 257
            |||||||||||||||||| ||||||||
Sbjct: 1455 cggctaacctagcctccttcgtccctc 1429

---

>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577B11
          Length = 180355

 Score =  206 bits (104), Expect = 5e-50
 Identities = 189/216 (87%), Gaps = 6/216 (2%)
 Strand = Plus / Plus

                                                                         
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
             |||||||||||||| || ||||||||||||  |||||||||| |     |||||||||||
Sbjct: 58173 ttttgttgaaggtcatttgagcttttcctgaaagtatggcatgg-----atacttcagcg 58227

                                                                         
Query: 62    ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
              | || ||  ||||| |||||||||||  ||||||| |||||||||   |||||||||||
Sbjct: 58228 tcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatatggctcatactt 58287

                                                                         
Query: 122   cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
             ||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||
Sbjct: 58288 cagcgctgcagcgcttggtactcggaccttggcttaaggcattttctcta-cccttctta 58346

                                                 
Query: 182   ccctgaaaaagcagggtcaccttgtgtccttaaacc 217
             ||||||||||| ||||||||||||||||||||||||
Sbjct: 58347 ccctgaaaaaggagggtcaccttgtgtccttaaacc 58382

---

>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0672D01
          Length = 146954

 Score =  206 bits (104), Expect = 5e-50
 Identities = 189/216 (87%), Gaps = 6/216 (2%)
 Strand = Plus / Plus

                                                                          
Query: 2      ttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcg 61
              |||||||||||||| || ||||||||||||  |||||||||| |     |||||||||||
Sbjct: 135384 ttttgttgaaggtcatttgagcttttcctgaaagtatggcatgg-----atacttcagcg 135438

                                                                          
Query: 62     ccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggctcatactt 121
               | || ||  ||||| |||||||||||  ||||||| |||||||||   |||||||||||
Sbjct: 135439 tcataacgtttggtacgagcctcgtggtaaagcaatggctagtccatatggctcatactt 135498

                                                                          
Query: 122    cagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttctta 181
              ||||||||||||||||||||||||||||| ||||  |||||||||||||| |||||||||
Sbjct: 135499 cagcgctgcagcgcttggtactcggaccttggcttaaggcattttctcta-cccttctta 135557

                                                  
Query: 182    ccctgaaaaagcagggtcaccttgtgtccttaaacc 217
              ||||||||||| ||||||||||||||||||||||||
Sbjct: 135558 ccctgaaaaaggagggtcaccttgtgtccttaaacc 135593

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2754

 Score =  204 bits (103), Expect = 2e-49
 Identities = 169/191 (88%), Gaps = 5/191 (2%)
 Strand = Plus / Minus

                                                                        
Query: 235  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 294
            ||||||||||| ||||||||||| |||     | ||||||||||||||||||| |||| |
Sbjct: 1490 taacctagcctactccgtccctcggta-----agggggtagtacaggaatattaacctat 1436

                                                                        
Query: 295  tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 354
            |||||||| ||||  |||||| |  |||||||||| ||||||||||||| ||||||||||
Sbjct: 1435 tgtccatcaactaaacctttcagtatgatcttaggacctgactcaccctacgtggacgaa 1376

                                                                        
Query: 355  ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 414
            ||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1375 ccttgcgaaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1316

                       
Query: 415  caagccgacat 425
            |||||||||||
Sbjct: 1315 caagccgacat 1305



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            |||||||||||||||||| |||||||||  ||||||||| ||| ||||||| ||||||||
Sbjct: 1230 acatcccacagcttcggcggatcgcttattcccgttcatattcggcgcaagagcgctcga 1171

                 
Query: 482  tcagt 486
            |||||
Sbjct: 1170 tcagt 1166



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 17   ttcgagcttttcctgggagtatggcat 43
            |||||||||||||||||||||| ||||
Sbjct: 1604 ttcgagcttttcctgggagtatagcat 1578

---

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Plus

                                                                         
Query: 323   tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 382
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63490 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 63549

                                                        
Query: 383   ggcattggattctcaccaatgttttcgttactcaagccgacat 425
             |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63550 ggcattggattctcaccaatgttttcgttactcaagccgacat 63592



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Plus

                                                                         
Query: 421   gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63671 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 63730

                     
Query: 481   atcagtga 488
             ||||||||
Sbjct: 63731 atcagtga 63738

---

>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full
            insert sequence
          Length = 1463

 Score =  204 bits (103), Expect = 2e-49
 Identities = 103/103 (100%)
 Strand = Plus / Minus

                                                                        
Query: 323  tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 382
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1179 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 1120

                                                       
Query: 383  ggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1119 ggcattggattctcaccaatgttttcgttactcaagccgacat 1077



 Score =  135 bits (68), Expect = 1e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                       
Query: 421 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 939

                   
Query: 481 atcagtga 488
           ||||||||
Sbjct: 938 atcagtga 931

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score =  204 bits (103), Expect = 2e-49
 Identities = 139/151 (92%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| |||||||| | | ||| ||||||||||||||||||||||||   |||||| ||||
Sbjct: 3241 gtacgggaatattaatccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3182

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3181 actcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattc 3122

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||| |||||||||||||||
Sbjct: 3121 tcaccaatgttttcgctactcaagccgacat 3091



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
            ||||||||||||||||||| || |||||| ||| ||||| ||| |||||
Sbjct: 2994 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgca 2946

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score =  200 bits (101), Expect = 3e-48
 Identities = 140/153 (91%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||| ||
Sbjct: 1443 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctggtcttaggtcc 1384

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 1383 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1324

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||||
Sbjct: 1323 tctcaccaatgttttcgttactcaagccgacat 1291

---

>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3669

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 1407 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1348

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1347 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1288

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| ||||||||||||||||||
Sbjct: 1287 ctcaccaatgtttgcgttactcaagccgacat 1256



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 424  atcccacagcttcggcagatc 444
            |||||||||||||||||||||
Sbjct: 1171 atcccacagcttcggcagatc 1151

---

>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                         
Query: 274   agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
             |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 26216 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 26157

                                                                         
Query: 334   gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
             |||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 26156 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 26097

                                             
Query: 394   ctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||| ||||||||||||||||||
Sbjct: 26096 ctcaccaatgtttgcgttactcaagccgacat 26065



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   atcccacagcttcggcagatc 444
             |||||||||||||||||||||
Sbjct: 25980 atcccacagcttcggcagatc 25960

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||  |||||||||||||| |||| ||||   ||||||||||
Sbjct: 3164 agtacaggaatattaacctgtcatccatcgactacgcttttcagcctcgccttaggccct 3105

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||
Sbjct: 3104 gactcaccctccgtggacgaaccttccagaggaaaccttaggttttcggggcattggatt 3045

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||| |||| ||||||||||
Sbjct: 3044 ctcaccaatgttttcgctacttaagccgacat 3013

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score =  196 bits (99), Expect = 5e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| ||||||| ||||||||| ||||| || |||||||||||||| ||
Sbjct: 3599 tagtacaggaatattaacctgttttccatcgacgacgccgtttggcctgatcttaggtcc 3540

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 3539 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 3480

                                           
Query: 393  tctcaccaatgttttcgttactcaagccgac 423
            |||||||||||||||||||||||||||||||
Sbjct: 3479 tctcaccaatgttttcgttactcaagccgac 3449

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2840

 Score =  196 bits (99), Expect = 5e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 1412 gtacaggaattttgacctgttgtccatcgactacgcctttcggcatcatcttaggccctg 1353

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||||||||| ||||||||| |||| || ||||| |||| |||||||||||||| ||||||
Sbjct: 1352 actcacccttcgtggacgagccttccgaaggaacccttaggttttcggggcatgggattc 1293

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| | |||| ||||||||||||||||||
Sbjct: 1292 tcacccacgtttgcgttactcaagccgacat 1262

---

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score =  196 bits (99), Expect = 5e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||| |||||||||||||| |||| ||||   |||||||||||
Sbjct: 189405 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 189346

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 189345 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 189286

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||| |||| ||||||||||
Sbjct: 189285 tcaccaatgttttcgctacttaagccgacat 189255



 Score =  196 bits (99), Expect = 5e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||| |||||||||||||| |||| ||||   |||||||||||
Sbjct: 150962 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 150903

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 150902 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 150843

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||| |||| ||||||||||
Sbjct: 150842 tcaccaatgttttcgctacttaagccgacat 150812



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
              ||||||||||||||||||| ||  ||||| ||||||||| ||| |||||
Sbjct: 189177 acatcccacagcttcggcaaattacttagtcccgttcattttcggcgca 189129



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
              ||||||||||||||||||| ||  ||||| ||||||||| ||| |||||
Sbjct: 150734 acatcccacagcttcggcaaattacttagtcccgttcattttcggcgca 150686

---

>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S
            rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and
            ITS1, strain SAG 45.88
          Length = 3065

 Score =  196 bits (99), Expect = 5e-47
 Identities = 138/151 (91%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| |||||||| ||| ||| ||||||||||||||||||||||||   |||||| ||||
Sbjct: 1894 gtacgggaatattaacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 1835

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 1834 actaaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattt 1775

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||| |||||||||||||||
Sbjct: 1774 tcaccaatgttttcgctactcaagccgacat 1744



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||| || |||||| ||| ||||| ||| ||||||| ||||| ||
Sbjct: 1626 acatcccacagcttcggcaaatagcttagtccctttcattttcggcgcaagagcgcttga 1567

                   
Query: 482  tcagtga 488
             ||||||
Sbjct: 1566 ccagtga 1560

---

>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0073M15, complete sequence
          Length = 143071

 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821

                                                           
Query: 63    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 108
             ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4038

 Score =  192 bits (97), Expect = 7e-46
 Identities = 139/153 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| ||||||| ||||||||| |||||||| |||||  ||||||| ||
Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||||
Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacat 1344

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score =  192 bits (97), Expect = 7e-46
 Identities = 139/153 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| ||||||| ||||||||| |||||||| |||||  ||||||| ||
Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||||
Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacat 1344

---

>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 36.94
          Length = 4420

 Score =  192 bits (97), Expect = 7e-46
 Identities = 139/153 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||||||||| | ||||||||||||||| || ||||| ||
Sbjct: 3096 tagtacaggaatattaacctgttgtccatcaattacgcctttcggcctcattttaggtcc 3037

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| ||||||||||||||| |||| | |||||| |||| ||||| |||||||||||||
Sbjct: 3036 tgactaaccctccgtggacgagccttccagaggaatccttaggtttccggggcattggat 2977

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||| |||||||||||||||
Sbjct: 2976 tctcaccaatgttttcgctactcaagccgacat 2944

---

>gb|L42986.1|RTCCPRGOLA Carteria lunzensis
          Length = 4448

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| ||||||||| ||||||||||||||  ||||||| |||
Sbjct: 1494 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1435

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||| ||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1434 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1375

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1374 ctcaccaatgttttcgttactcaagccgacat 1343

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| |||||||||||||||||||||||||  |||||| || 
Sbjct: 1559 agtacaggaatattaacctgttttccatcgactacgcctttcggcctggccttaggtccc 1500

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||| ||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1499 gactaaccccccatggacgagcctagtggaggaagccttaggttttcggggcattggatt 1440

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1439 ctcaccaatgttttcgttactcaagccgacat 1408



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 426  cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
            ||||||||||||||||| ||||||| ||||||||| ||| |||||||
Sbjct: 1314 cccacagcttcggcagaccgcttagtcccgttcattttcggcgcaag 1268

---

>gb|L43500.1|RTCCPRRNL Carteria olivieri
          Length = 5667

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| ||||||||||||||| ||||||||   ||||||||||
Sbjct: 2034 agtacaggaatattaacctgttttccatcgactacgccattcggcctcgccttaggccct 1975

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || |||||||||||||  |||||| |||| ||||||||||||||||||||
Sbjct: 1974 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1915

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||
Sbjct: 1914 ctcaccaatgttttcgttactcaagccaacat 1883

---

>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3978

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||| |||
Sbjct: 1480 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctaatcttaggtcct 1421

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| || ||||||||||| | ||||||| ||   ||||||||||||||||||||
Sbjct: 1420 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1361

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            | ||||||||||||||||||||||||||||||
Sbjct: 1360 cacaccaatgttttcgttactcaagccgacat 1329



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 428  cacagcttcggcagatcgcttagccccg 455
            ||||||||||||||||| ||||| ||||
Sbjct: 1212 cacagcttcggcagatcacttagtcccg 1185

---

>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2888

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||| |||||||||||||||  |||||| |||
Sbjct: 1581 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctggccttaggtcct 1522

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| ||  |||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1521 gactcaccccccacggacgaacctggtggaggaacccttaggttttcggggcattggatt 1462

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1461 ctcaccaatgttttcgttactcaagccgacat 1430

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2622

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| |||||| ||||||||||||||||||   ||||| |||
Sbjct: 1401 agtacaggaatattaacctgttttccatcaactacgcctttcggcctggctttaggtcct 1342

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| ||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1341 gactaaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1282

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| ||||||||||||||||||
Sbjct: 1281 ctcaccaatgtttgcgttactcaagccgacat 1250

---

>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104259

 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Minus

                                                                         
Query: 107   acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 166
             |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834

                                                        
Query: 167   ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 209
             |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 15791

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||| |||||||||||||| |||| ||||   |||||| ||||
Sbjct: 190328 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 190269

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 190268 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 190209

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||| |||| ||||||||||
Sbjct: 190208 tcaccaatgttttcgctacttaagccgacat 190178



 Score =  188 bits (95), Expect = 1e-44
 Identities = 137/151 (90%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||| |||||||||||||| |||| ||||   |||||| ||||
Sbjct: 151755 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 151696

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              |||||||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||
Sbjct: 151695 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 151636

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||| |||| ||||||||||
Sbjct: 151635 tcaccaatgttttcgctacttaagccgacat 151605



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
              ||||||||||||||||||| ||  ||||| ||||||||| ||| |||||
Sbjct: 190100 acatcccacagcttcggcaaattacttagtcccgttcattttcggcgca 190052



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
              ||||||||||||||||||| ||  ||||| ||||||||| ||| |||||
Sbjct: 151527 acatcccacagcttcggcaaattacttagtcccgttcattttcggcgca 151479

---

>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 6750

 Score =  186 bits (94), Expect = 5e-44
 Identities = 136/150 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 2896 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 2837

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| ||  |||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 2836 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 2777

                                          
Query: 394  ctcaccaatgttttcgttactcaagccgac 423
            ||||||||||||||||||||||||||||||
Sbjct: 2776 ctcaccaatgttttcgttactcaagccgac 2747

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  186 bits (94), Expect = 5e-44
 Identities = 139/154 (90%)
 Strand = Plus / Minus

                                                                        
Query: 272  gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 331
            |||||||||||||||  |||||||||||||| | | | || || || || | |||||| |
Sbjct: 1376 gtagtacaggaatataaacctgttgtccatcaattgcaccatttggtctcaccttaggtc 1317

                                                                        
Query: 332  ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 391
            |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1316 ctgactcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattgga 1257

                                              
Query: 392  ttctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||| ||||||||||||||||||
Sbjct: 1256 ttctcaccaatgtttgcgttactcaagccgacat 1223



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                        
Query: 421  gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 480
            |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||
Sbjct: 1140 gacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcg 1081

                    
Query: 481  atcagtga 488
            ||||||||
Sbjct: 1080 atcagtga 1073

---

>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2
          Length = 655

 Score =  186 bits (94), Expect = 5e-44
 Identities = 136/150 (90%)
 Strand = Plus / Minus

                                                                       
Query: 274 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
           |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 150 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 91

                                                                       
Query: 334 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
           ||||||||| ||  |||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 90  gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 31

                                         
Query: 394 ctcaccaatgttttcgttactcaagccgac 423
           ||||||||||||||||||||||||||||||
Sbjct: 30  ctcaccaatgttttcgttactcaagccgac 1

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  184 bits (93), Expect = 2e-43
 Identities = 139/153 (90%), Gaps = 1/153 (0%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            |||||||||||| || ||||||| |||||||||| |||| |||||| |||||||||| ||
Sbjct: 1823 tagtacaggaatgtt-acctgttatccatcgactgcgccattcggcttgatcttaggtcc 1765

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||||||||  ||||||||||||||||| ||||| |||| ||||||| |||||||||||
Sbjct: 1764 tgactcaccccacgtggacgaaccttgcgtaggaatccttaggttttcagggcattggat 1705

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||| ||||||||||||||||||
Sbjct: 1704 tctcaccaatgtttgcgttactcaagccgacat 1672



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 428  cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 487
            ||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||||||||||||
Sbjct: 1579 cacagcttcggcagaccgcttagtcccgttcattttcggcgcaagagcgctcgatcagtg 1520

             
Query: 488  a 488
            |
Sbjct: 1519 a 1519

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 137909 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 137850

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              |||||||||||| ||||||| ||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 137849 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 137790

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||| || ||||||||| |||||
Sbjct: 137789 ctcaccaatgtttgcgctactcaagctgacat 137758



 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Plus

                                                                         
Query: 274   agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
             |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 47635 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 47694

                                                                         
Query: 334   gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
             |||||||||||| ||||||| ||||| ||||||| |||| ||||||||||||||||||||
Sbjct: 47695 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 47754

                                             
Query: 394   ctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||| || ||||||||| |||||
Sbjct: 47755 ctcaccaatgtttgcgctactcaagctgacat 47786



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                               
Query: 424    atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
              ||||||||||||||||||   |||||| ||||||||| ||| |||||||
Sbjct: 137668 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaag 137620



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 424   atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
             ||||||||||||||||||   |||||| ||||||||| ||| |||||||
Sbjct: 47876 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaag 47924

---

>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-AstI gene
          Length = 4859

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||| ||||||||   |||||| |||
Sbjct: 1484 agtacaggaatattaacctgtttgccatcgactacgccgttcggcctcgccttaggtcct 1425

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| || ||||||| ||||| ||||||| |||| ||||| ||||||||||||||
Sbjct: 1424 gactcaccccccatggacgagccttgtggaggaacccttaggtttccggggcattggatt 1365

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1364 ctcaccaatgttttcgttactcaagccgacat 1333



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 424  atcccacagcttcggcagatcgcttagccccg 455
            ||||||||||||||||||| ||||||| ||||
Sbjct: 1185 atcccacagcttcggcagaccgcttagtcccg 1154

---

>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal
            RNA (rrnL), site-specific DNA endonuclease I-CpaI,
            site-specific DNA endonuclease I-CpaIII, site-specific
            DNA endonuclease I-CpaIV, site-specific DNA endonuclease
            I-CpaV genes
          Length = 8217

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| ||  |||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||
Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacat 1551

---

>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1
          Length = 2219

 Score =  182 bits (92), Expect = 7e-43
 Identities = 137/152 (90%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||||||||||||||||||   |||||| |||
Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| ||  |||||||||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||
Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacat 1551

---

>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Minus

                                                                           
Query: 275     gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
               ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || |
Sbjct: 1666872 gtacaggaatattgacctgttatccatcgactacgcctttcggcctgaccttaggaccag 1666813

                                                                           
Query: 335     actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
               ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 1666812 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1666753

                                              
Query: 395     tcaccaatgttttcgttactcaagccgacat 425
               ||||| ||||||||| |||||||||||||||
Sbjct: 1666752 tcacccatgttttcgctactcaagccgacat 1666722

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||  |||||||| ||||| ||||||||  ||||||| ||
Sbjct: 2875 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 2816

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 2815 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 2756

                                           
Query: 393  tctcaccaatgttttcgttactcaagccgac 423
            |||||||||||||||||||||||||||||||
Sbjct: 2755 tctcaccaatgttttcgttactcaagccgac 2725

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Plus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||| ||||||||| ||||| || |||||  ||||||| ||||
Sbjct: 150948 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 151007

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||||
Sbjct: 151008 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 151067

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              |||||||||||||||||||||||||||||||
Sbjct: 151068 tcaccaatgttttcgttactcaagccgacat 151098



 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Minus

                                                                         
Query: 275   gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
             ||||||||||||| ||||||| ||||||||| ||||| || |||||  ||||||| ||||
Sbjct: 43255 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 43196

                                                                         
Query: 335   actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
             ||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||||
Sbjct: 43195 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 43136

                                            
Query: 395   tcaccaatgttttcgttactcaagccgacat 425
             |||||||||||||||||||||||||||||||
Sbjct: 43135 tcaccaatgttttcgttactcaagccgacat 43105

---

>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2
          Length = 659

 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Minus

                                                                       
Query: 273 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
           ||||||||||||||| |||||||  |||||||| ||||| ||||||||  ||||||| ||
Sbjct: 151 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 92

                                                                       
Query: 333 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
           ||||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||
Sbjct: 91  tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 32

                                          
Query: 393 tctcaccaatgttttcgttactcaagccgac 423
           |||||||||||||||||||||||||||||||
Sbjct: 31  tctcaccaatgttttcgttactcaagccgac 1

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score =  180 bits (91), Expect = 3e-42
 Identities = 136/151 (90%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||| ||||||||| ||||| || |||||  ||||||| ||||
Sbjct: 1427 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 1368

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||| || ||||||||||| | ||||||| |||| |||||||||||||||||||||
Sbjct: 1367 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 1308

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||||||||||||||||
Sbjct: 1307 tcaccaatgttttcgttactcaagccgacat 1277

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score =  176 bits (89), Expect = 4e-41
 Identities = 137/153 (89%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||  |||||||||||||||||||||||   |||||| ||
Sbjct: 7149 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 7090

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||||||||| | ||||||||||| |   ||||| |||| |||||||||||||||||||
Sbjct: 7089 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 7030

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||| ||||||||||||||||||
Sbjct: 7029 tctcaccaatgtttgcgttactcaagccgacat 6997

---

>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2715

 Score =  176 bits (89), Expect = 4e-41
 Identities = 137/153 (89%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||  |||||||||||||||||||||||   |||||| ||
Sbjct: 1500 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 1441

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||||||||| | ||||||||||| |   ||||| |||| |||||||||||||||||||
Sbjct: 1440 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 1381

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||| ||||||||||||||||||
Sbjct: 1380 tctcaccaatgtttgcgttactcaagccgacat 1348

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              |||||||||||||| |||||||  ||||||||||||||  |||||||   |||||| |||
Sbjct: 154770 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 154829

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              ||||||||| ||  ||||||||||||  |||||| |||| ||||||||||||||||||||
Sbjct: 154830 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 154889

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||||||||||||||||||||||
Sbjct: 154890 ctcaccaatgttttcgttactcaagccgacat 154921



 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                         
Query: 274   agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
             |||||||||||||| |||||||  ||||||||||||||  |||||||   |||||| |||
Sbjct: 79122 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 79063

                                                                         
Query: 334   gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
             ||||||||| ||  ||||||||||||  |||||| |||| ||||||||||||||||||||
Sbjct: 79062 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 79003

                                             
Query: 394   ctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||||||||||||||||||
Sbjct: 79002 ctcaccaatgttttcgttactcaagccgacat 78971



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 424    atcccacagcttcggcagatcgcttagccccg 455
              |||||| ||||||||||||| |||||| ||||
Sbjct: 155032 atcccatagcttcggcagattgcttagtcccg 155063



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 424   atcccacagcttcggcagatcgcttagccccg 455
             |||||| ||||||||||||| |||||| ||||
Sbjct: 78860 atcccatagcttcggcagattgcttagtcccg 78829

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial
            sequence
          Length = 2446

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||| ||||| || ||| ||||||||||||||||||| ||||||||   |||||| |||
Sbjct: 1028 agtacgggaattttaacccgttgtccatcgactacgccgttcggcctcgccttaggtcct 969

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||||||| |||||||||| |||||||||||||| || |||||||||||||||||
Sbjct: 968  gactaaccctccggggacgaacctggcggaggaaaccttagggtttcggggcattggatt 909

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| || |||||||||||||||
Sbjct: 908  ctcaccaatgtttgcgctactcaagccgacat 877



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 424 atcccacagcttcggcagatcgcttagccccgttcat 460
           ||||||||||||||| | |||||||||||||||||||
Sbjct: 792 atcccacagcttcggtacatcgcttagccccgttcat 756

---

>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 4173

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||  |||||||  ||||||||||||||| |||||||   |||||| |||
Sbjct: 1587 agtacaggaatataaacctgtttgccatcgactacgcctgtcggcctcgccttaggtcct 1528

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||| | |||||||||||||   ||||| |||| ||||||||||||||||||||
Sbjct: 1527 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcggggcattggatt 1468

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1467 ctcaccaatgttttcgttactcaagccgacat 1436

---

>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2864

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||||||||||||  |||||| ||||||||| ||||||||||||||  ||||||| |||
Sbjct: 1670 agtacaggaatattcgcctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1611

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||| ||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1610 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1551

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||| ||||||||||
Sbjct: 1550 ctcaccaatgttttcgttacttaagccgacat 1519

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| |||||||||||| |||||||| |||  |||||| |||
Sbjct: 1464 agtacaggaatattaacctgttctccatcgactacacctttcggtctggccttaggtcct 1405

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| ||||| | ||||||||||| |   ||||| |||| ||||||||||||||||||||
Sbjct: 1404 gactaacccttcatggacgaacctagtaaaggaacccttaggttttcggggcattggatt 1345

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1344 ctcaccaatgttttcgttactcaagccgacat 1313



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
            ||||||||||||||||||| ||||||| ||||||||| ||| |||||||
Sbjct: 1192 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaag 1144

---

>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene,
            partial sequence
          Length = 2440

 Score =  172 bits (87), Expect = 7e-40
 Identities = 135/151 (89%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| |||||||| ||| ||||||||||||||||||||||||||||   |||||| || |
Sbjct: 1025 gtacgggaatattaacccgttgtccatcgactacgcctttcggcctcgccttaggtcccg 966

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||| |||||||| |||| || ||||||||||||||||||
Sbjct: 965  actaaccctccgcggacgagccttccggaggaacccttagggtttcggggcattggattc 906

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||| |||||||||||||||
Sbjct: 905  tcaccaatgttttcgctactcaagccgacat 875

---

>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score =  170 bits (86), Expect = 3e-39
 Identities = 180/210 (85%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                         
Query: 210   cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 269
             |||||||| ||||||| | |||||||   ||||||| ||||||||| |  ||||||||| 
Sbjct: 17574 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 17633

                                                                         
Query: 270   gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 329
                 |||||||||||||| ||||||| |||||||| |||||  || | ||| | ||||||
Sbjct: 17634 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 17692

                                                                         
Query: 330   ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 389
              |||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||||
Sbjct: 17693 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 17752

                                           
Query: 390   gattctcaccaatgttttcgttactcaagc 419
             |||||||||||||||||||| |||||||||
Sbjct: 17753 gattctcaccaatgttttcgctactcaagc 17782



 Score =  170 bits (86), Expect = 3e-39
 Identities = 180/210 (85%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 269
            |||||||| ||||||| | |||||||   ||||||| ||||||||| |  ||||||||| 
Sbjct: 3292 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 3233

                                                                        
Query: 270  gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 329
                |||||||||||||| ||||||| |||||||| |||||  || | ||| | ||||||
Sbjct: 3232 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 3174

                                                                        
Query: 330  ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 389
             |||||||||||||||| |||||| |||| |||||||| |||||||||||||||||||||
Sbjct: 3173 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 3114

                                          
Query: 390  gattctcaccaatgttttcgttactcaagc 419
            |||||||||||||||||||| |||||||||
Sbjct: 3113 gattctcaccaatgttttcgctactcaagc 3084

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2691

 Score =  170 bits (86), Expect = 3e-39
 Identities = 137/154 (88%)
 Strand = Plus / Minus

                                                                        
Query: 272  gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 331
            |||||||||||||||| ||||||| ||||||||||||||| || ||| | | ||||||  
Sbjct: 1380 gtagtacaggaatattaacctgttatccatcgactacgccgtttggctttaccttaggtt 1321

                                                                        
Query: 332  ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 391
            |||||||||||| || ||||||||||| || ||||| |||||||||||||||||| ||||
Sbjct: 1320 ctgactcaccctacgcggacgaaccttccgtaggaatccttgggttttcggggcactgga 1261

                                              
Query: 392  ttctcaccaatgttttcgttactcaagccgacat 425
            ||||||||| ||||| ||||||||||||||||||
Sbjct: 1260 ttctcaccagtgtttgcgttactcaagccgacat 1227



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||||
Sbjct: 1144 acatctcacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcga 1085

                   
Query: 482  tcagtga 488
            |||||||
Sbjct: 1084 tcagtga 1078

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score =  170 bits (86), Expect = 3e-39
 Identities = 161/186 (86%)
 Strand = Plus / Plus

                                                                         
Query: 240   tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 299
             |||||| |||||||||||  || ||||||    |||||| |||||||| ||| |||||||
Sbjct: 38992 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 39051

                                                                         
Query: 300   atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 359
             ||   ||||||||||||||||   |||||| ||||||| |||||||| |||||| |||| 
Sbjct: 39052 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 39111

                                                                         
Query: 360   cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 419
             |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 39112 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 39171

                   
Query: 420   cgacat 425
             ||||||
Sbjct: 39172 cgacat 39177



 Score =  170 bits (86), Expect = 3e-39
 Identities = 161/186 (86%)
 Strand = Plus / Minus

                                                                         
Query: 240   tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 299
             |||||| |||||||||||  || ||||||    |||||| |||||||| ||| |||||||
Sbjct: 20408 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 20349

                                                                         
Query: 300   atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 359
             ||   ||||||||||||||||   |||||| ||||||| |||||||| |||||| |||| 
Sbjct: 20348 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 20289

                                                                         
Query: 360   cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 419
             |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20288 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 20229

                   
Query: 420   cgacat 425
             ||||||
Sbjct: 20228 cgacat 20223



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                         
Query: 424   atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 483
             ||||||||||||||||| ||  ||||| |||  |||| ||| ||||| | ||||| ||||
Sbjct: 39254 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 39313

                  
Query: 484   agtga 488
             |||||
Sbjct: 39314 agtga 39318



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 424   atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 483
             ||||||||||||||||| ||  ||||| |||  |||| ||| ||||| | ||||| ||||
Sbjct: 20146 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 20087

                  
Query: 484   agtga 488
             |||||
Sbjct: 20086 agtga 20082

---

>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CelI gene
          Length = 3779

 Score =  168 bits (85), Expect = 1e-38
 Identities = 136/153 (88%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||  |||||||| ||||||||||||||   |||||| ||
Sbjct: 1469 tagtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttagggcc 1410

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            |||||||||| || ||||||||||| | ||||||| ||   |||||||||||||||||||
Sbjct: 1409 tgactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggat 1350

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            ||| |||||||||||||||||||||||||||||
Sbjct: 1349 tctaaccaatgttttcgttactcaagccgacat 1317

---

>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2786

 Score =  168 bits (85), Expect = 1e-38
 Identities = 136/153 (88%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||||||||||||| |||||||  ||||||||| ||||||||||||||  |||||| ||
Sbjct: 1539 tagtacaggaatattcacctgtttgccatcgactgcgcctttcggcctggccttaggtcc 1480

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||| ||| |||||| |||  ||| |||| |||| |||||||||||||||||||
Sbjct: 1479 tgactaacccaccgcggacgaccctaccggtggaacccttaggttttcggggcattggat 1420

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||| ||||||||||||||||||
Sbjct: 1419 tctcaccaatgtttgcgttactcaagccgacat 1387

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score =  168 bits (85), Expect = 1e-38
 Identities = 118/129 (91%)
 Strand = Plus / Minus

                                                                        
Query: 297  tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 356
            |||||||||||||| |||| ||||   |||||| |||||||||||||||| |||||||||
Sbjct: 2936 tccatcgactacgcttttcagcctcgccttaggtcctgactcaccctccgcggacgaacc 2877

                                                                        
Query: 357  ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 416
            || | ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2876 ttccagaggaaaccttaggttttcggggcattggattctcaccaatgttttcgctactca 2817

                     
Query: 417  agccgacat 425
            |||||||||
Sbjct: 2816 agccgacat 2808



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
            ||||||||||||||||| || |||||| ||||||||| ||| |||||
Sbjct: 2731 atcccacagcttcggcaaattgcttagtcccgttcattttcggcgca 2685

---

>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Plus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              |||||||||||||| ||| |||  ||||||||||||||| |||||||  ||||||| |||
Sbjct: 170075 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 170134

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| |||||||
Sbjct: 170135 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 170194

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              |||||||  |||| ||||||||||||||||||
Sbjct: 170195 ctcaccagcgtttgcgttactcaagccgacat 170226



 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              |||||||||||||| ||| |||  ||||||||||||||| |||||||  ||||||| |||
Sbjct: 122851 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 122792

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| |||||||
Sbjct: 122791 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 122732

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              |||||||  |||| ||||||||||||||||||
Sbjct: 122731 ctcaccagcgtttgcgttactcaagccgacat 122700



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 429    acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
              |||||||||||||  ||||||| ||||||||| ||| |||| || ||||| || ||||||
Sbjct: 170310 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 170369



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 429    acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
              |||||||||||||  ||||||| ||||||||| ||| |||| || ||||| || ||||||
Sbjct: 122616 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 122557

---

>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence
          Length = 116699

 Score =  167 bits (84), Expect = 4e-38
 Identities = 136/152 (89%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                         
Query: 117   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 176
             ||||||||||| | ||||| | ||||||| |||| |||| ||| ||||||||||||||||
Sbjct: 77396 tacttcagcgccggagcgcctcgtactcgaaccttggctggagccattttctctacccct 77455

                                                                         
Query: 177   tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 235
             ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 77456 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 77515

                                             
Query: 236   aacctagcctcctccgtccctccgtaccaaca 267
             |||||||||||||||||||||| | |||||||
Sbjct: 77516 aacctagcctcctccgtccctcgggaccaaca 77547



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 2     ttttgttgaaggtcgttcgagcttttcctgggagtatggcatc 44
             ||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 77350 ttttgtttaaggtcgttcgagcttttcttgggagtatggcatc 77392

---

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              ||||||||||| ||||||||||  ||||||||||||||||||| |||   |||||| |||
Sbjct: 193281 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 193222

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              |||||||||| | |||||||||||||   ||||| |||| |||||||||| |||||||||
Sbjct: 193221 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 193162

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||| ||||||||||||||||||
Sbjct: 193161 ctcaccaatgtttgcgttactcaagccgacat 193130



 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Plus

                                                                          
Query: 274    agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
              ||||||||||| ||||||||||  ||||||||||||||||||| |||   |||||| |||
Sbjct: 143501 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 143560

                                                                          
Query: 334    gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
              |||||||||| | |||||||||||||   ||||| |||| |||||||||| |||||||||
Sbjct: 143561 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 143620

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              ||||||||||||| ||||||||||||||||||
Sbjct: 143621 ctcaccaatgtttgcgttactcaagccgacat 143652



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 424    atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 471
              ||||||||||||||||||  ||||||| ||||||||| ||| ||||||
Sbjct: 193044 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaa 192997



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 424    atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 471
              ||||||||||||||||||  ||||||| ||||||||| ||| ||||||
Sbjct: 143738 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaa 143785

---

>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 6713

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||||||||| || ||||||| ||||||||||||||||||||||||   |||||| |||
Sbjct: 3003 agtacaggaatcttaacctgttttccatcgactacgcctttcggccttgccttaggtcct 2944

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||| || ||||||||||| | ||||||| ||   ||||||||||||||||||||
Sbjct: 2943 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 2884

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            || |||||||||||||||||||||||| ||||
Sbjct: 2883 cttaccaatgttttcgttactcaagccaacat 2852

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||||||| || | |||||||| ||||||| ||||||||||| |||  ||||||| |||
Sbjct: 1873 agtacaggattagtaacctgttgcccatcgaatacgcctttcgaccttttcttaggacct 1814

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||| ||| | ||||||| |||| ||||||||||||||||||||
Sbjct: 1813 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1754

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||||||||
Sbjct: 1753 ctcaccaatgttttcgttactcaagccgacat 1722

---

>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2937

 Score =  167 bits (84), Expect = 4e-38
 Identities = 135/152 (88%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||| |||  ||||||||||||||| |||||||  ||||||| |||
Sbjct: 1442 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 1383

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| |||||||
Sbjct: 1382 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 1323

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            |||||||  |||| ||||||||||||||||||
Sbjct: 1322 ctcaccagcgtttgcgttactcaagccgacat 1291



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 429  acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
            |||||||||||||  ||||||| ||||||||| ||| |||| || ||||| || ||||||
Sbjct: 1207 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 1148

---

>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2920

 Score =  167 bits (84), Expect = 4e-38
 Identities = 129/144 (89%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| ||||||| |||||||||||||||  |||||||   |||||| |||
Sbjct: 1669 agtacaggaatattaacctgttttccatcgactacgccgctcggcctcgccttaggtcct 1610

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || |||||||||||||  |||||| |||| ||||||||||||||||||||
Sbjct: 1609 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1550

                                    
Query: 394  ctcaccaatgttttcgttactcaa 417
            ||||||||||||||||||||||||
Sbjct: 1549 ctcaccaatgttttcgttactcaa 1526

---

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score =  167 bits (84), Expect = 4e-38
 Identities = 132/148 (89%)
 Strand = Plus / Plus

                                                                           
Query: 274     agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
               ||||| |||||||||||| ||||||||||||||||||||||||||||   |||||| || 
Sbjct: 2333412 agtactggaatattgaccagttgtccatcgactacgcctttcggcctcgccttaggtccc 2333471

                                                                           
Query: 334     gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
               |||| ||||| || |||||| |||| || ||||| ||||||| |||||||||||||||||
Sbjct: 2333472 gactaacccttcgcggacgagccttccgaaggaacccttggggtttcggggcattggatt 2333531

                                           
Query: 394     ctcaccaatgttttcgttactcaagccg 421
               |||||||||||||||| |||||||||||
Sbjct: 2333532 ctcaccaatgttttcgctactcaagccg 2333559



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                           
Query: 427     ccacagcttcggcagatcgcttagccccgttcatcttcagcgca 470
               |||||||||||| | ||| ||||| ||||||||| ||| |||||
Sbjct: 2333647 ccacagcttcggtacatcacttagtcccgttcattttcggcgca 2333690

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score =  167 bits (84), Expect = 4e-38
 Identities = 136/152 (89%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              |||| ||||| |||||| ||| ||||||||||||||||||||||||   |||||| ||||
Sbjct: 114014 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 114073

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 393
              ||||||||| ||||||||| |||| || | |||| |||| ||||||||||||||||||||
Sbjct: 114074 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 114133

                                              
Query: 394    ctcaccaatgttttcgttactcaagccgacat 425
              |||||||||||||||| |||||||||||||||
Sbjct: 114134 ctcaccaatgttttcgctactcaagccgacat 114165



 Score =  167 bits (84), Expect = 4e-38
 Identities = 136/152 (89%), Gaps = 1/152 (0%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| ||||| |||||| ||| ||||||||||||||||||||||||   |||||| ||||
Sbjct: 3503 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3444

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 393
            ||||||||| ||||||||| |||| || | |||| |||| ||||||||||||||||||||
Sbjct: 3443 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 3384

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||| |||||||||||||||
Sbjct: 3383 ctcaccaatgttttcgctactcaagccgacat 3352



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                          
Query: 422    acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
              ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| ||
Sbjct: 114254 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 114313

                     
Query: 482    tcagtga 488
               ||||||
Sbjct: 114314 ccagtga 114320



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                        
Query: 422  acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 481
            ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| ||
Sbjct: 3263 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 3204

                   
Query: 482  tcagtga 488
             ||||||
Sbjct: 3203 ccagtga 3197

---

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 320997 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 320938

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 320937 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 320878

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||| ||||||||| |||||||||||||||
Sbjct: 320877 tcacccatgttttcgctactcaagccgacat 320847



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                         
Query: 430    cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
              ||||||||| | | ||||||||||||||||| ||| ||||| |  ||||||| ||||||
Sbjct: 320762 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtga 320704

---

>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3916

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 3420 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3361

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 3360 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3301

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 3300 tcacccatgttttcgctactcaagccgacat 3270

---

>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3917

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 3421 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3362

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 3361 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3302

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 3301 tcacccatgttttcgctactcaagccgacat 3271

---

>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial
            sequence; tRNA-Ile and tRNA-Ala genes, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 4141

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 3645 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3586

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 3585 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3526

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 3525 tcacccatgttttcgctactcaagccgacat 3495

---

>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S
            ribosomal RNA, and 5S ribosomal RNA genes, complete
            sequence; chloroplast
          Length = 5026

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| |||||||| ||| |||||||||||||||||| |||| ||||   |||||| ||||
Sbjct: 3149 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 3090

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || ||||||
Sbjct: 3089 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 3030

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| || ||||||||||||||||||||||
Sbjct: 3029 tcacctatattttcgttactcaagccgacat 2999

---

>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence
          Length = 38521

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Plus

                                                                         
Query: 275   gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
             ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 19460 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 19519

                                                                         
Query: 335   actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
             ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 19520 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 19579

                                            
Query: 395   tcaccaatgttttcgttactcaagccgacat 425
             ||||| ||||||||| |||||||||||||||
Sbjct: 19580 tcacccatgttttcgctactcaagccgacat 19610



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 430   cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
             ||||||||| | | ||||||||||||||||| ||| ||||| |  ||||||| ||||||
Sbjct: 19695 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtga 19753

---

>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence
          Length = 37884

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Plus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 1214 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 1273

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 1274 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1333

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 1334 tcacccatgttttcgctactcaagccgacat 1364



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 430  cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 488
            ||||||||| | | ||||||||||||||||| ||| ||||| |  ||||||| ||||||
Sbjct: 1449 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtga 1507

---

>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 316486 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 316427

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 316426 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 316367

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||| ||||||||| |||||||||||||||
Sbjct: 316366 tcacccatgttttcgctactcaagccgacat 316336

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4181

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| ||||
Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| ||||||
Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| |||||||||||||||||||||||||
Sbjct: 1341 tcaccgatgttttcgttactcaagccgacat 1311

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                           
Query: 275     gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
               ||||||||||||| ||||||||||||||||||||||  ||| ||||   |||||| ||||
Sbjct: 1659901 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1659842

                                                                           
Query: 335     actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
               ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1659841 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1659782

                                              
Query: 395     tcaccaatgttttcgttactcaagccgacat 425
               ||||| ||||||||| |||||||||||||||
Sbjct: 1659781 tcacccatgttttcgctactcaagccgacat 1659751



 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 275     gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
               ||||||||||||| ||||||||||||||||||||||  ||| ||||   |||||| ||||
Sbjct: 1048843 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1048902

                                                                           
Query: 335     actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
               ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1048903 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1048962

                                              
Query: 395     tcaccaatgttttcgttactcaagccgacat 425
               ||||| ||||||||| |||||||||||||||
Sbjct: 1048963 tcacccatgttttcgctactcaagccgacat 1048993

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  165 bits (83), Expect = 2e-37
 Identities = 92/95 (96%)
 Strand = Plus / Minus

                                                                           
Query: 268     aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
               |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 9725496 aggggtagtacaggtatattgacatgttgtccatcgactacgcctttcagcctgatctta 9725437

                                                  
Query: 328     ggccctgactcaccctccgtggacgaaccttgcgg 362
               |||||||||||||||||||||||||||||||||||
Sbjct: 9725436 ggccctgactcaccctccgtggacgaaccttgcgg 9725402



 Score =  165 bits (83), Expect = 2e-37
 Identities = 89/91 (97%)
 Strand = Plus / Minus

                                                                          
Query: 3      tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 814488 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 814429

                                             
Query: 63     cgtagcgcctggtatgagcctcgtggagaag 93
              ||||| |||||||||||||||||||||||||
Sbjct: 814428 cgtagtgcctggtatgagcctcgtggagaag 814398



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Minus

                                                              
Query: 82       ctcgtggagaagcaattgctagt----ccacggggctcatacttca 123
                |||||||||||||||| ||||||    | |||||||||||||||||
Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778

---

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score =  165 bits (83), Expect = 2e-37
 Identities = 89/91 (97%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 23696 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 23637

                                            
Query: 63    cgtagcgcctggtatgagcctcgtggagaag 93
             ||||| |||||||||||||||||||||||||
Sbjct: 23636 cgtagtgcctggtatgagcctcgtggagaag 23606

---

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score =  165 bits (83), Expect = 2e-37
 Identities = 89/91 (97%)
 Strand = Plus / Minus

                                                                         
Query: 3     tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 62
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92619 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 92560

                                            
Query: 63    cgtagcgcctggtatgagcctcgtggagaag 93
             ||||| |||||||||||||||||||||||||
Sbjct: 92559 cgtagtgcctggtatgagcctcgtggagaag 92529

---

>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0033K18
          Length = 138487

 Score =  165 bits (83), Expect = 2e-37
 Identities = 92/95 (96%)
 Strand = Plus / Minus

                                                                         
Query: 268   aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 327
             |||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 34567 aggggtagtacaggtatattgacatgttgtccatcgactacgcctttcagcctgatctta 34508

                                                
Query: 328   ggccctgactcaccctccgtggacgaaccttgcgg 362
             |||||||||||||||||||||||||||||||||||
Sbjct: 34507 ggccctgactcaccctccgtggacgaaccttgcgg 34473

---

>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions
          Length = 3282

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||||||||||||||||||  ||| ||||   |||||| ||||
Sbjct: 1663 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1604

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 1603 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1544

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 1543 tcacccatgttttcgctactcaagccgacat 1513

---

>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1
          Length = 1965

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| ||||
Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| ||||||
Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| |||||||||||||||||||||||||
Sbjct: 1341 tcaccgatgttttcgttactcaagccgacat 1311

---

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 275     gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
               ||||||||||||| ||||||||||||||||||||||  ||| ||||   |||||| ||||
Sbjct: 2656885 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 2656944

                                                                           
Query: 335     actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
               ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 2656945 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 2657004

                                              
Query: 395     tcaccaatgttttcgttactcaagccgacat 425
               ||||| ||||||||| |||||||||||||||
Sbjct: 2657005 tcacccatgttttcgctactcaagccgacat 2657035



 Score =  165 bits (83), Expect = 2e-37
 Identities = 134/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              ||||||||||||| ||||||||||||||||||||||  ||| ||||   |||||| ||||
Sbjct: 572036 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 571977

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| ||||||
Sbjct: 571976 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 571917

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||| ||||||||| |||||||||||||||
Sbjct: 571916 tcacccatgttttcgctactcaagccgacat 571886

---

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score =  161 bits (81), Expect = 3e-36
 Identities = 135/153 (88%)
 Strand = Plus / Plus

                                                                         
Query: 273   tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
             ||||||||||||||| ||||||| |||||||||||||   |||  |||   |||||| ||
Sbjct: 26411 tagtacaggaatattaacctgttatccatcgactacgttgttcaaccttgccttaggacc 26470

                                                                         
Query: 333   tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
             ||||| ||||| |||||||||||||| |  |||||||||| |||||||||||||||||||
Sbjct: 26471 tgacttacccttcgtggacgaaccttccaaaggaaaccttaggttttcggggcattggat 26530

                                              
Query: 393   tctcaccaatgttttcgttactcaagccgacat 425
             ||||||||||||||||| |||||||||||||||
Sbjct: 26531 tctcaccaatgttttcgctactcaagccgacat 26563



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                
Query: 422   acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 472
             ||||||||||||||||||| ||  ||||||||||||||| ||| |||||||
Sbjct: 26641 acatcccacagcttcggcaaattacttagccccgttcattttcggcgcaag 26691

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  161 bits (81), Expect = 3e-36
 Identities = 138/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| |||| |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaacctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial
            sequence; and rrnL and putative site-specific DNA
            endonuclease (rrnL) genes, complete cds; chloroplast
            genes for chloroplast products
          Length = 4502

 Score =  159 bits (80), Expect = 1e-35
 Identities = 134/152 (88%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||||||||| |||||||||| |||||||||||||||||||| |||   |||||| |||
Sbjct: 1450 agtacaggaatgttgacctgttttccatcgactacgcctttcgacctcgccttaggacct 1391

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| ||||| | ||||||| |||||   ||||| |||| |||||||||| |||||||||
Sbjct: 1390 gactaacccttcatggacgagccttgtaaaggaacccttaggttttcgggccattggatt 1331

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| ||||||||||||||||||
Sbjct: 1330 ctcaccaatgtttgcgttactcaagccgacat 1299



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 471
            ||||||||||||||||||  ||||||| ||||||||| ||| ||||||
Sbjct: 1213 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaa 1166

---

>gb|L43540.1|DUNCPRRNL Dunaliella parva
          Length = 5685

 Score =  159 bits (80), Expect = 1e-35
 Identities = 134/152 (88%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||| ||||||||||||||   |||||| |||
Sbjct: 1940 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttaggacct 1881

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||||||| | ||||||| ||   ||||||||||||||||||||
Sbjct: 1880 gactaaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1821

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||||||||||||||||| ||||
Sbjct: 1820 ctcaccaatgttttcgttactcaagccaacat 1789

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                        
Query: 290  cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 349
            |||||||||||||| || |||| |||||||| | ||||||||||||||||||| ||||||
Sbjct: 1385 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1326

                                                                        
Query: 350  acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 409
            |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| ||
Sbjct: 1325 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1266

                            
Query: 410  ttactcaagccgacat 425
            ||||||||||||||||
Sbjct: 1265 ttactcaagccgacat 1250

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2901

 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                        
Query: 290  cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 349
            |||||||||||||| || |||| |||||||| | ||||||||||||||||||| ||||||
Sbjct: 1398 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1339

                                                                        
Query: 350  acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 409
            |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| ||
Sbjct: 1338 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1279

                            
Query: 410  ttactcaagccgacat 425
            ||||||||||||||||
Sbjct: 1278 ttactcaagccgacat 1263

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score =  159 bits (80), Expect = 1e-35
 Identities = 122/136 (89%)
 Strand = Plus / Minus

                                                                        
Query: 290  cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 349
            |||||||||||||| || |||| |||||||| | ||||||||||||||||||| ||||||
Sbjct: 5972 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 5913

                                                                        
Query: 350  acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 409
            |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| ||
Sbjct: 5912 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 5853

                            
Query: 410  ttactcaagccgacat 425
            ||||||||||||||||
Sbjct: 5852 ttactcaagccgacat 5837

---

>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                         
Query: 275   gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
             |||| |||||||| ||| |||||||||||||||||| |||| ||||   |||||| ||||
Sbjct: 48953 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 49012

                                                                         
Query: 335   actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
             ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || ||||||
Sbjct: 49013 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 49072

                                            
Query: 395   tcaccaatgttttcgttactcaagccgacat 425
              |||| || ||||||||||||||||||||||
Sbjct: 49073 ccacctatattttcgttactcaagccgacat 49103



 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||| |||||||| ||| |||||||||||||||||| |||| ||||   |||||| ||||
Sbjct: 5406 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 5347

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || ||||||
Sbjct: 5346 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 5287

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
             |||| || ||||||||||||||||||||||
Sbjct: 5286 ccacctatattttcgttactcaagccgacat 5256

---

>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            |||||||||| |||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 5200 gtacaggaatgttgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 5259

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 5260 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 5319

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| ||||||||| |||||||||||||||
Sbjct: 5320 tcacccatgttttcgctactcaagccgacat 5350

---

>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              |||||||||| |||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 212572 gtacaggaatgttgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 212513

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 212512 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 212453

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||| ||||||||| |||||||||||||||
Sbjct: 212452 tcacccatgttttcgctactcaagccgacat 212422

---

>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3498

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| ||||
Sbjct: 1480 gtacaggaatattaacctgttttccatcgacgacgccatttggcctggtcttaggtcctg 1421

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| ||||||
Sbjct: 1420 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1361

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| |||||||||||||||||||| ||||
Sbjct: 1360 tcaccgatgttttcgttactcaagccaacat 1330

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2571

 Score =  157 bits (79), Expect = 4e-35
 Identities = 161/187 (86%), Gaps = 1/187 (0%)
 Strand = Plus / Minus

                                                                        
Query: 240  tagcctcctccgtccctccgtaccaa-caaggggtagtacaggaatattgacctgttgtc 298
            |||||| ||||||||||| ||||||| |||   | ||||||||||| || |||||||| |
Sbjct: 1444 tagccttctccgtccctcggtaccaaacaatttgcagtacaggaatgttaacctgttggc 1385

                                                                        
Query: 299  catcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacctt 358
            |||||  |||||||||||||||   |||||| ||||||||||||||| ||||||| ||| 
Sbjct: 1384 catcggatacgcctttcggcctctccttaggtcctgactcaccctccatggacgagccta 1325

                                                                        
Query: 359  gcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaag 418
              | ||||| |||| ||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1324 ctgaaggaacccttaggttttcggagcattggattctcaccaatgtttgcgttactcaag 1265

                   
Query: 419  ccgacat 425
            |||||||
Sbjct: 1264 ccgacat 1258



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 423  catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 482
            |||| ||||||||||||||  ||||||| ||||||||| ||| ||||||| ||||| || 
Sbjct: 1179 catctcacagcttcggcaggccgcttagtcccgttcattttcggcgcaagagcgcttgac 1120

                  
Query: 483  cagtga 488
            ||||||
Sbjct: 1119 cagtga 1114

---

>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1
          Length = 2668

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                        
Query: 275  gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
            ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| ||||
Sbjct: 1480 gtacaggaatattaacctgttttccatcgacgacgccatttggcctggtcttaggtcctg 1421

                                                                        
Query: 335  actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
            ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| ||||||
Sbjct: 1420 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1361

                                           
Query: 395  tcaccaatgttttcgttactcaagccgacat 425
            ||||| |||||||||||||||||||| ||||
Sbjct: 1360 tcaccgatgttttcgttactcaagccaacat 1330

---

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score =  157 bits (79), Expect = 4e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 275    gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 334
              |||||||||| |||||||||| ||||||||||||||||||||||||   |||||| || |
Sbjct: 356873 gtacaggaatgttgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 356814

                                                                          
Query: 335    actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 394
              ||| |||||||| |||||| |||  |||||||| |||| || ||||||||||| ||||||
Sbjct: 356813 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 356754

                                             
Query: 395    tcaccaatgttttcgttactcaagccgacat 425
              ||||| ||||||||| |||||||||||||||
Sbjct: 356753 tcacccatgttttcgctactcaagccgacat 356723

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacat 1251

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2696

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacat 1251

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacat 1251

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  153 bits (77), Expect = 6e-34
 Identities = 137/157 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 328
            ||||||||||| ||||||| | || |||||||||  |||  |||||| |  |||||||| 
Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349

                                                                        
Query: 329  gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 388
            | ||||||||||||| |||||| |||||||| | ||||| |||| |||||||||||||||
Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289

                                                 
Query: 389  ggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||||||||||||| ||||||||||||||||||
Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacat 1252

---

>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA
          Length = 2957

 Score =  153 bits (77), Expect = 6e-34
 Identities = 134/153 (87%)
 Strand = Plus / Minus

                                                                        
Query: 273  tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 332
            ||||| ||||||||| |||  ||||||||||||||||| |||| ||||   |||||| ||
Sbjct: 1316 tagtataggaatattaacccattgtccatcgactacgcttttcagcctcgccttaggtcc 1257

                                                                        
Query: 333  tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 392
            ||||| |||||||| |||||| |||| ||||||||||||| ||||||| |||||| ||||
Sbjct: 1256 tgacttaccctccgcggacgagccttccggaggaaaccttaggttttcagggcatcggat 1197

                                             
Query: 393  tctcaccaatgttttcgttactcaagccgacat 425
            ||||||| ||||||||| |||||||||||||||
Sbjct: 1196 tctcacccatgttttcgctactcaagccgacat 1164

---

>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA
          Length = 212

 Score =  153 bits (77), Expect = 6e-34
 Identities = 105/113 (92%), Gaps = 1/113 (0%)
 Strand = Plus / Plus

                                                                       
Query: 313 ttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacctt 372
           |||||||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 64  ttcggcctgatgataggccctgactcaccctccgtggac-aaccttgcggaggaaccctt 122

                                                                
Query: 373 gggttttcggggcattggattctcaccaatgttttcgttactcaagccgacat 425
            |||||||| ||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 123 aggttttcgaggcattggattctcaccaacgtttgcgttactcaagccgacat 175

---

>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial
            sequence
          Length = 2444

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||| ||||| || ||| ||||||||||||||||| |||||| |||   ||||||||| 
Sbjct: 1029 agtactggaatcttcaccagttgtccatcgactacgtctttcgacctcgccttaggcccc 970

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||||||| |||||| |||| |||||||| |||| || |||| ||||||||||||
Sbjct: 969  gactcaccctccgcggacgagccttccggaggaacccttaggatttcagggcattggatt 910

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| || |||||||||||||||
Sbjct: 909  ctcaccaatgtttgcgctactcaagccgacat 878

---

>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||| ||||| || ||| ||||||||||||||||| |||||| |||   ||||||||| 
Sbjct: 1027 agtactggaatcttcaccagttgtccatcgactacgtctttcgacctcgccttaggcccc 968

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            ||||||||||||| |||||| |||| |||||||| |||| || |||| ||||||||||||
Sbjct: 967  gactcaccctccgcggacgagccttccggaggaacccttaggatttcagggcattggatt 908

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| || |||||||||||||||
Sbjct: 907  ctcaccaatgtttgcgctactcaagccgacat 876

---

>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||| |||||||||||| |||||||||||||||||||| |||||||   |||||| |||
Sbjct: 1024 agtaccggaatattgaccggttgtccatcgactacgcctctcggcctcgccttaggtcct 965

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||||||| |||||| |||| |||||||| |||| || |||||||| || |||||
Sbjct: 964  gactaaccctccgcggacgagccttccggaggaacccttaggatttcggggtatgggatt 905

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            |||||| || |||||| |||||||||||||||
Sbjct: 904  ctcacccatattttcgctactcaagccgacat 873



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 427 ccacagcttcggcagatcgcttagccccgttcat 460
           |||||||||||| | ||| |||||||||||||||
Sbjct: 790 ccacagcttcggtacatcacttagccccgttcat 757

---

>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene
          Length = 3334

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            ||||||||||| ||||||||||  ||||||||||| |||||||| ||   |||||| |||
Sbjct: 1430 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 1371

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| ||||||| ||||||||||||| | ||||| |||| |||||||||||||  |||||
Sbjct: 1370 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 1311

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            |||||| ||||||||||||||||| |||||||
Sbjct: 1310 ctcaccgatgttttcgttactcaaaccgacat 1279

---

>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2863

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  |||||||| ||||||||||||||   |||||| |||
Sbjct: 1426 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttaggacct 1367

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| |||| || ||||||| ||| | ||||||| ||   ||||||||||||||||||||
Sbjct: 1366 gactaaccccccatggacgagcctagtggaggaacccaacggttttcggggcattggatt 1307

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            || |||||||||||||||||||||||||||||
Sbjct: 1306 cttaccaatgttttcgttactcaagccgacat 1275

---

>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2610

 Score =  151 bits (76), Expect = 3e-33
 Identities = 133/152 (87%)
 Strand = Plus / Minus

                                                                        
Query: 274  agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 333
            |||||||||||||| |||||||  ||||||||||||||||||| |||   |||||| |||
Sbjct: 1415 agtacaggaatattaacctgtttgccatcgactacgcctttcgacctcgccttaggacct 1356

                                                                        
Query: 334  gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 393
            |||| ||||| | ||||||| |||||   ||||| |||| |||||||||| |||||||||
Sbjct: 1355 gactaacccttcatggacgagccttgtaaaggaacccttaggttttcgggacattggatt 1296

                                            
Query: 394  ctcaccaatgttttcgttactcaagccgacat 425
            ||||||||||||| ||||||||||||||||||
Sbjct: 1295 ctcaccaatgtttgcgttactcaagccgacat 1264



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 424  atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 471
            ||||||||||||||||||  ||||||| ||||||||| ||| ||||||
Sbjct: 1178 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaa 1131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,718,157
Number of Sequences: 3902068
Number of extensions: 2718157
Number of successful extensions: 44434
Number of sequences better than 10.0: 1550
Number of HSP's better than 10.0 without gapping: 1553
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 38140
Number of HSP's gapped (non-prelim): 5948
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---