ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2g22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 466 e-128
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
3dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
4dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
5gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 44 0.45
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.45
7gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 44 0.45
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
9gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.45
10gb|AC104215.11| Mus musculus chromosome 7, clone RP23-44I18, com... 42 1.8
11ref|XM_610035.2| PREDICTED: Bos taurus similar to Liprin-alpha 4... 42 1.8
12ref|NM_001009553.1| Homo sapiens nanos homolog 1 (Drosophila) (N... 42 1.8
13ref|NM_199461.2| Homo sapiens nanos homolog 1 (Drosophila) (NANO... 42 1.8
14gb|AF458985.1| Homo sapiens EC_Rep1a mRNA, complete cds 42 1.8
15emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chr... 42 1.8
16dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.8
17emb|AJ328986.1|HSA328986 Homo sapiens genomic sequence surroundi... 42 1.8
18gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, com... 42 1.8
19ref|XM_917520.2| PREDICTED: Mus musculus similar to Spectrin bet... 40 7.0
20gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 7.0
21gb|AF527964.1| Mycobacterium avium isolate locus 8 insertion seq... 40 7.0
22gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.0
23dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
24dbj|AK119955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
25gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 40 7.0
26gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, comple... 40 7.0
27emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chr... 40 7.0

>dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008K20, full
           insert sequence
          Length = 1951

 Score =  466 bits (235), Expect = e-128
 Identities = 397/451 (88%)
 Strand = Plus / Plus

                                                                       
Query: 63  ccgccgccggcgcgggccgagtcgctcaccgtcgccttccccgtctccaaggcccgagag 122
           ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 279 ccgccgccggcgcgggccgagtcgctcaccgtcgcgttccctgtctccaaggcccgcgag 338

                                                                       
Query: 123 gtgaaccgggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcgta 182
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| 
Sbjct: 339 gtgaaccgggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcgtg 398

                                                                       
Query: 183 gaccccaccttcaaccaccaagactgggaccagaaacttcagcagacgatggtggagatg 242
           || ||||||||||| |||||||| ||||||  || ||| |||||||| ||||||||||||
Sbjct: 399 gatcccaccttcaatcaccaagattgggacatgagactgcagcagaccatggtggagatg 458

                                                                       
Query: 243 ttcccgctgaaatcggcagacgccgcctacggcaagatcagcgggatggtgtccacgcta 302
           ||||||||||||||||  || |||||||| || ||||||||||||||| ||||||| || 
Sbjct: 459 ttcccgctgaaatcggaggatgccgcctatggtaagatcagcgggatgctgtccacactc 518

                                                                       
Query: 303 ggggaccctttcacaaagatcatcacccccaaggaatatcagagtttcaagatcggaagc 362
           || || || ||||| |||||||||| ||||||||||||||||||||||| ||| ||||||
Sbjct: 519 ggcgatccgttcaccaagatcatcagccccaaggaatatcagagtttcaggattggaagc 578

                                                                       
Query: 363 gatgggaatttgcaaggggttggcatattcataaatagggaccctgccaccggacgcttg 422
           ||||||| | | |||||||||||  | |||||||| | ||| |||  | | |||||||||
Sbjct: 579 gatgggagtgtccaaggggttggggtgttcataaacaaggagcctagctctggacgcttg 638

                                                                       
Query: 423 cttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcgat 482
           ||||||||| |||||||||| || |||||||| ||  |||||||| | || | |||||||
Sbjct: 639 cttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcgat 698

                                          
Query: 483 gagctagttgagatcaatgggaatagtgttt 513
           || |||||||||||| ||||||| |||||||
Sbjct: 699 gaactagttgagatcgatgggaagagtgttt 729



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                            
Query: 121      aggtgaaccgggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcg 180
                |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 12189189 aggtgaaccgggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcg 12189248

                                        
Query: 181      tagaccccaccttcaaccaccaag 204
                | || ||||||||||| |||||||
Sbjct: 12189249 tggatcccaccttcaatcaccaag 12189272



 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                            
Query: 222      cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 281
                |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 12189414 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 12189473

                                                                       
Query: 282      agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 336
                ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 12189474 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 12189528



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                            
Query: 63       ccgccgccggcgcgggccgagtcgctcaccgtcgccttccccgtctccaaggcccgagag 122
                ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 12189027 ccgccgccggcgcgggccgagtcgctcaccgtcgcgttccctgtctccaaggcccgcgag 12189086

                   
Query: 123      gtg 125
                |||
Sbjct: 12189087 gtg 12189089



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 422      gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 481
                |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 12189793 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 12189852

                                     
Query: 482      tgagctagttgagatcaatgg 502
                ||| |||||||||||| ||||
Sbjct: 12189853 tgaactagttgagatcgatgg 12189873



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 334      aggaatatcagagtttcaagatcggaagcgatgggaatttgcaaggggttgg 385
                |||||||||||||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 12189624 aggaatatcagagtttcaggattggaagcgatgggagtgtccaaggggttgg 12189675



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 63      ccgccgccggcgcgggccga 82
               ||||||||||||||||||||
Sbjct: 7105103 ccgccgccggcgcgggccga 7105122



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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                         
Query: 121   aggtgaaccgggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcg 180
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26211 aggtgaaccgggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcg 26270

                                     
Query: 181   tagaccccaccttcaaccaccaag 204
             | || ||||||||||| |||||||
Sbjct: 26271 tggatcccaccttcaatcaccaag 26294



 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                         
Query: 222   cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 281
             |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 26436 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 26495

                                                                    
Query: 282   agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 336
             ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 26496 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 26550



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                         
Query: 63    ccgccgccggcgcgggccgagtcgctcaccgtcgccttccccgtctccaaggcccgagag 122
             ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 26049 ccgccgccggcgcgggccgagtcgctcaccgtcgcgttccctgtctccaaggcccgcgag 26108

                
Query: 123   gtg 125
             |||
Sbjct: 26109 gtg 26111



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 422   gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 481
             |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 26815 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 26874

                                  
Query: 482   tgagctagttgagatcaatgg 502
             ||| |||||||||||| ||||
Sbjct: 26875 tgaactagttgagatcgatgg 26895



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 334   aggaatatcagagtttcaagatcggaagcgatgggaatttgcaaggggttgg 385
             |||||||||||||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 26646 aggaatatcagagtttcaggattggaagcgatgggagtgtccaaggggttgg 26697



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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score =  135 bits (68), Expect = 2e-28
 Identities = 80/84 (95%)
 Strand = Plus / Plus

                                                                          
Query: 121    aggtgaaccgggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcg 180
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 131978 aggtgaaccgggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcg 132037

                                      
Query: 181    tagaccccaccttcaaccaccaag 204
              | || ||||||||||| |||||||
Sbjct: 132038 tggatcccaccttcaatcaccaag 132061



 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                          
Query: 222    cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 281
              |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 132203 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 132262

                                                                     
Query: 282    agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 336
              ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 132263 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 132317



 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Plus

                                                                          
Query: 63     ccgccgccggcgcgggccgagtcgctcaccgtcgccttccccgtctccaaggcccgagag 122
              ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||
Sbjct: 131816 ccgccgccggcgcgggccgagtcgctcaccgtcgcgttccctgtctccaaggcccgcgag 131875

                 
Query: 123    gtg 125
              |||
Sbjct: 131876 gtg 131878



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 422    gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 481
              |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 132582 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 132641

                                   
Query: 482    tgagctagttgagatcaatgg 502
              ||| |||||||||||| ||||
Sbjct: 132642 tgaactagttgagatcgatgg 132662



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                  
Query: 334    aggaatatcagagtttcaagatcggaagcgatgggaatttgcaaggggttgg 385
              |||||||||||||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 132413 aggaatatcagagtttcaggattggaagcgatgggagtgtccaaggggttgg 132464



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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 57      ttcaccccgccgccggcgcggg 78
               ||||||||||||||||||||||
Sbjct: 2455903 ttcaccccgccgccggcgcggg 2455924



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 134     gcagaggacgctggtggaggca 155
               ||||||||||||||||||||||
Sbjct: 7982644 gcagaggacgctggtggaggca 7982623



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>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 221    tcagcagacgatggtggagatgttcc 246
              |||||||| |||||||||||||||||
Sbjct: 100549 tcagcagaggatggtggagatgttcc 100574



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 134     gcagaggacgctggtggaggca 155
               ||||||||||||||||||||||
Sbjct: 7980479 gcagaggacgctggtggaggca 7980458



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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0081I10, complete sequence
          Length = 143298

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 134   gcagaggacgctggtggaggca 155
             ||||||||||||||||||||||
Sbjct: 50007 gcagaggacgctggtggaggca 49986



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>gb|AC104215.11| Mus musculus chromosome 7, clone RP23-44I18, complete sequence
          Length = 235147

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 481  atgagctagttgagatcaatg 501
            |||||||||||||||||||||
Sbjct: 4523 atgagctagttgagatcaatg 4503



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>ref|XM_610035.2| PREDICTED: Bos taurus similar to Liprin-alpha 4 (Protein tyrosine
            phosphatase receptor type f polypeptide-interacting
            protein alpha 4) (PTPRF-interacting protein alpha 4)
            (LOC531537), mRNA
          Length = 1713

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 213  cagaaacttcagcagacgatg 233
            |||||||||||||||||||||
Sbjct: 1147 cagaaacttcagcagacgatg 1167



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>ref|NM_001009553.1| Homo sapiens nanos homolog 1 (Drosophila) (NANOS1), transcript
          variant 2, mRNA
          Length = 3935

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 ccccgccgccggcgcgggccg 81
          |||||||||||||||||||||
Sbjct: 59 ccccgccgccggcgcgggccg 39



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>ref|NM_199461.2| Homo sapiens nanos homolog 1 (Drosophila) (NANOS1), transcript
          variant 1, mRNA
          Length = 4627

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 ccccgccgccggcgcgggccg 81
          |||||||||||||||||||||
Sbjct: 59 ccccgccgccggcgcgggccg 39



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>gb|AF458985.1| Homo sapiens EC_Rep1a mRNA, complete cds
          Length = 4035

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 61 ccccgccgccggcgcgggccg 81
          |||||||||||||||||||||
Sbjct: 59 ccccgccgccggcgcgggccg 39



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>emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chromosome 10 Contains a
              pseudogene similar to part of lactate dehydrogenase A
              (LDH1) (LDHD), two novel genes, the NANOS1 gene for nanos
              homolog 1 (Drosophila) and one CpG island, complete
              sequence
          Length = 119104

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 61     ccccgccgccggcgcgggccg 81
              |||||||||||||||||||||
Sbjct: 114035 ccccgccgccggcgcgggccg 114015



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 83      gtcgctcaccgtcgccttccccgtc 107
               ||||||||||||||||||| |||||
Sbjct: 6732875 gtcgctcaccgtcgccttcgccgtc 6732899



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>emb|AJ328986.1|HSA328986 Homo sapiens genomic sequence surrounding NotI site, clone
          NL1-HH6R
          Length = 727

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 61 ccccgccgccggcgcgggccg 81
          |||||||||||||||||||||
Sbjct: 74 ccccgccgccggcgcgggccg 94



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>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence
          Length = 126085

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 481  atgagctagttgagatcaatg 501
            |||||||||||||||||||||
Sbjct: 9807 atgagctagttgagatcaatg 9827



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>ref|XM_917520.2| PREDICTED: Mus musculus similar to Spectrin beta chain, brain 4
           (Spectrin, non-erythroid beta chain 4) (Beta-V spectrin)
           (BSPECV) (LOC640524), mRNA
          Length = 11049

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 tggtggaggcatgggggctg 164
           ||||||||||||||||||||
Sbjct: 90  tggtggaggcatgggggctg 71



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 3       gccgctgggctcgccgccgc 22
               ||||||||||||||||||||
Sbjct: 3107556 gccgctgggctcgccgccgc 3107575



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>gb|AF527964.1| Mycobacterium avium isolate locus 8 insertion sequence IS901
          putative transport protein and IS901 protein genes,
          complete cds
          Length = 2421

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 64 cgccgccggcgcgggccgag 83
          ||||||||||||||||||||
Sbjct: 10 cgccgccggcgcgggccgag 29



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 62      cccgccgccggcgcgggccg 81
               ||||||||||||||||||||
Sbjct: 3020113 cccgccgccggcgcgggccg 3020094



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>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0080E19
          Length = 152755

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     ccgccgccggcgcgggccga 82
              ||||||||||||||||||||
Sbjct: 125890 ccgccgccggcgcgggccga 125909



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>dbj|AK119955.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C09, full
           insert sequence
          Length = 1151

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  ccgccgccggcgcgggccga 82
           ||||||||||||||||||||
Sbjct: 362 ccgccgccggcgcgggccga 381



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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 221   tcagcagacgatggtggagatgtt 244
             ||||||||||||| ||||||||||
Sbjct: 13065 tcagcagacgatgatggagatgtt 13088



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>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence
          Length = 195652

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 333   aaggaatatcagagtttcaagatc 356
             |||||||||||||| |||||||||
Sbjct: 75337 aaggaatatcagaggttcaagatc 75360



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>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete
              sequence
          Length = 194045

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    tggtggaggcatgggggctg 164
              ||||||||||||||||||||
Sbjct: 102196 tggtggaggcatgggggctg 102177


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,382,890
Number of Sequences: 3902068
Number of extensions: 3382890
Number of successful extensions: 64055
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63358
Number of HSP's gapped (non-prelim): 696
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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