ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468587.1| Oryza sativa (japonica cultivar-group), predic... 159 1e-35
2dbj|AK066740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 1e-35
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 139 1e-29
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
5gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
6gb|BT018692.1| Zea mays clone EL01N0512E07.d mRNA sequence 74 5e-10
7gb|AY110713.1| Zea mays CL7875_1 mRNA sequence 60 7e-06
8gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 42 1.7
9gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 40 6.8
10ref|XM_363563.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.8
11gb|AC147132.3| Mus musculus BAC clone RP24-189K3 from chromosome... 40 6.8
12gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome... 40 6.8
13gb|AC147638.2| Mus musculus BAC clone RP23-181L5 from chromosome... 40 6.8
14ref|XM_909704.2| PREDICTED: Mus musculus RIKEN cDNA 1700012H05 g... 40 6.8
15emb|AL138744.41| Human DNA sequence from clone RP13-257M1 on chr... 40 6.8
16ref|NM_029660.1| Mus musculus RIKEN cDNA 1700012H05 gene (170001... 40 6.8
17dbj|AK005907.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.8
18emb|Z78015.1|CER02D5 Caenorhabditis elegans Cosmid R02D5, comple... 40 6.8
19gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 40 6.8 
>ref|XM_468587.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 759

 Score =  159 bits (80), Expect = 1e-35
 Identities = 140/160 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   gctctcccgcttcccggactccggcaacttccgcggcctcgccttcgtcaccttcgagtc 63
           |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 309 gctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgagtc 368

                                                                       
Query: 64  agatgaagttgccctgaaatctctggagcttgatggatacaaaattggtaacaggtttat 123
           | | || || |   |||| ||||| |||||||| |||| ||||||||| |||||||||||
Sbjct: 369 aaacgaggtggtaatgaagtctcttgagcttgacggattcaaaattggcaacaggtttat 428

                                                   
Query: 124 gagggttgaaagatgcaggattactgctagctcgaagagg 163
           ||| ||||||||||||||| |  ||||| |||||||||||
Sbjct: 429 gagagttgaaagatgcaggttggctgctggctcgaagagg 468



 Score =  131 bits (66), Expect = 2e-27
 Identities = 111/126 (88%)
 Strand = Plus / Plus

                                                                       
Query: 286 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 345
           |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || ||
Sbjct: 591 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 650

                                                                       
Query: 346 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 405
           ||||||||| |||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct: 651 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 710

                 
Query: 406 gcgcgg 411
           ||||||
Sbjct: 711 gcgcgg 716
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>dbj|AK066740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082B19, full
           insert sequence
          Length = 1092

 Score =  159 bits (80), Expect = 1e-35
 Identities = 140/160 (87%)
 Strand = Plus / Plus

                                                                       
Query: 4   gctctcccgcttcccggactccggcaacttccgcggcctcgccttcgtcaccttcgagtc 63
           |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 445 gctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgagtc 504

                                                                       
Query: 64  agatgaagttgccctgaaatctctggagcttgatggatacaaaattggtaacaggtttat 123
           | | || || |   |||| ||||| |||||||| |||| ||||||||| |||||||||||
Sbjct: 505 aaacgaggtggtaatgaagtctcttgagcttgacggattcaaaattggcaacaggtttat 564

                                                   
Query: 124 gagggttgaaagatgcaggattactgctagctcgaagagg 163
           ||| ||||||||||||||| |  ||||| |||||||||||
Sbjct: 565 gagagttgaaagatgcaggttggctgctggctcgaagagg 604



 Score =  139 bits (70), Expect = 1e-29
 Identities = 148/174 (85%)
 Strand = Plus / Plus

                                                                       
Query: 286 gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 345
           |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || ||
Sbjct: 727 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 786

                                                                       
Query: 346 tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 405
           ||||||||| |||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct: 787 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 846

                                                                 
Query: 406 gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 459
           ||||||  ||||  | |||||| | |||||| |||  ||||||| |||||||||
Sbjct: 847 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 900
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  139 bits (70), Expect = 1e-29
 Identities = 148/174 (85%)
 Strand = Plus / Plus

                                                                           
Query: 286     gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 345
               |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || ||
Sbjct: 1303634 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 1303693

                                                                           
Query: 346     tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 405
               ||||||||| |||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct: 1303694 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 1303753

                                                                     
Query: 406     gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 459
               ||||||  ||||  | |||||| | |||||| |||  ||||||| |||||||||
Sbjct: 1303754 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 1303807



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                         
Query: 4       gctctcccgcttcccggactccggcaacttccgcggcctcgccttcgtcaccttcgag 61
               |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 1302676 gctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgag 1302733



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 113     aacaggtttatgagggttgaaagatgcaggattactgctagctcgaagagg 163
               |||||||||||||| ||||||||||||||| |  ||||| |||||||||||
Sbjct: 1303461 aacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagagg 1303511
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  139 bits (70), Expect = 1e-29
 Identities = 148/174 (85%)
 Strand = Plus / Plus

                                                                           
Query: 286     gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 345
               |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || ||
Sbjct: 1303632 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 1303691

                                                                           
Query: 346     tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 405
               ||||||||| |||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct: 1303692 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 1303751

                                                                     
Query: 406     gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 459
               ||||||  ||||  | |||||| | |||||| |||  ||||||| |||||||||
Sbjct: 1303752 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 1303805



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                         
Query: 4       gctctcccgcttcccggactccggcaacttccgcggcctcgccttcgtcaccttcgag 61
               |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 1302674 gctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgag 1302731



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                  
Query: 113     aacaggtttatgagggttgaaagatgcaggattactgctagctcgaagagg 163
               |||||||||||||| ||||||||||||||| |  ||||| |||||||||||
Sbjct: 1303459 aacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagagg 1303509
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>gb|AC098695.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1126B12,
              complete sequence
          Length = 146241

 Score =  139 bits (70), Expect = 1e-29
 Identities = 148/174 (85%)
 Strand = Plus / Plus

                                                                          
Query: 286    gattgcatcaataagatttgccatcgacaagagaacaggagattctcgtggcttctgcca 345
              |||| |||| ||||| ||||| ||| ||||||||||||| ||||||||||| || || ||
Sbjct: 108536 gatttcatcgataaggtttgctatcaacaagagaacaggtgattctcgtggtttttgtca 108595

                                                                          
Query: 346    tgttgatttcgaggacgatgaatcgcttgagaaagctgtcgggatgaatcaatctgaact 405
              ||||||||| |||||||| || ||||||||||| ||||| || |||||||||||||||||
Sbjct: 108596 tgttgattttgaggacgacgagtcgcttgagaaggctgtaggaatgaatcaatctgaact 108655

                                                                    
Query: 406    gcgcggaagacccgtgaagatagcgtatgctatcatcaacagggcctgaaggct 459
              ||||||  ||||  | |||||| | |||||| |||  ||||||| |||||||||
Sbjct: 108656 gcgcggccgacctatcaagatatcatatgctgtcagtaacaggggctgaaggct 108709



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                        
Query: 4      gctctcccgcttcccggactccggcaacttccgcggcctcgccttcgtcaccttcgag 61
              |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 107578 gctctctcgcttcccggactccggcaacttccgcggcctcgcgttcgtctccttcgag 107635



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                                 
Query: 113    aacaggtttatgagggttgaaagatgcaggattactgctagctcgaagagg 163
              |||||||||||||| ||||||||||||||| |  ||||| |||||||||||
Sbjct: 108363 aacaggtttatgagagttgaaagatgcaggttggctgctggctcgaagagg 108413
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>gb|BT018692.1| Zea mays clone EL01N0512E07.d mRNA sequence
          Length = 1700

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                       
Query: 206 ggctgcctctcggcttatgtcggcaatctctcatggaacatcagtgagaaggatttgaga 265
           |||||||||||||||||||| || ||||||| ||||||| ||| ||| || || ||| ||
Sbjct: 79  ggctgcctctcggcttatgttggtaatctcttatggaacgtcattgaaaatgacttgcga 138

                                                                       
Query: 266 gatttcttcaaatcgtcaaggattgcatcaataagatttgccatcgacaagagaacagga 325
           ||||||||||  || || | |||||||| | |||| || | ||| ||||| ||||| || 
Sbjct: 139 gatttcttcagctcatcgaagattgcattagtaaggttcgtcattgacaaaagaactggg 198

                                        
Query: 326 gattctcgtggcttctgccatgttgattt 354
           | ||| | |||||| || |||||||||||
Sbjct: 199 ggttcccatggcttttgtcatgttgattt 227
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>gb|AY110713.1| Zea mays CL7875_1 mRNA sequence
          Length = 655

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                             
Query: 195 agaagcccgatggctgcctctcggcttatgtcggcaatctctcatggaac 244
           ||||| |||| |||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 602 agaagtccgaaggctgcctctcggcatatgttggcaacctctcatggaac 553
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>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 22    ctccggcaacttccgcggcctcgccttcg 50
             |||||||||||||| |||||||| |||||
Sbjct: 63500 ctccggcaacttcctcggcctcgacttcg 63528
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>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 121   tatgagggttgaaagatgca 140
             ||||||||||||||||||||
Sbjct: 57070 tatgagggttgaaagatgca 57089
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>ref|XM_363563.1| Magnaporthe grisea 70-15 hypothetical protein (MG01489.4) partial
            mRNA
          Length = 2940

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tctgccatgttgatttcgag 358
            ||||||||||||||||||||
Sbjct: 2183 tctgccatgttgatttcgag 2164
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>gb|AC147132.3| Mus musculus BAC clone RP24-189K3 from chromosome 7, complete sequence
          Length = 189225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   aaattggtaacaggtttatg 124
             ||||||||||||||||||||
Sbjct: 91568 aaattggtaacaggtttatg 91549
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>gb|AC132462.4| Mus musculus BAC clone RP23-35F22 from chromosome 7, complete sequence
          Length = 194641

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    tcgccttcgtcaccttcgag 61
             ||||||||||||||||||||
Sbjct: 97151 tcgccttcgtcaccttcgag 97132
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>gb|AC147638.2| Mus musculus BAC clone RP23-181L5 from chromosome 7, complete
            sequence
          Length = 196114

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 105  aaattggtaacaggtttatg 124
            ||||||||||||||||||||
Sbjct: 4386 aaattggtaacaggtttatg 4367
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>ref|XM_909704.2| PREDICTED: Mus musculus RIKEN cDNA 1700012H05 gene (1700012H05Rik),
           mRNA
          Length = 1612

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  tcgccttcgtcaccttcgag 61
           ||||||||||||||||||||
Sbjct: 492 tcgccttcgtcaccttcgag 511
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>emb|AL138744.41| Human DNA sequence from clone RP13-257M1 on chromosome Xp11.23-11.4
             Contains part of the UTX gene for ubiquitously transcribed
             tetratricopeptide repeat gene X chromosome and a CpG
             island, complete sequence
          Length = 143968

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   tttgagagatttcttcaaat 278
             ||||||||||||||||||||
Sbjct: 31412 tttgagagatttcttcaaat 31431
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>ref|NM_029660.1| Mus musculus RIKEN cDNA 1700012H05 gene (1700012H05Rik), mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  tcgccttcgtcaccttcgag 61
           ||||||||||||||||||||
Sbjct: 218 tcgccttcgtcaccttcgag 237
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>dbj|AK005907.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700012H05 product:TESTES SPECIFIC
           HETEROGENOUS NUCLEAR RIBONUCLEOPROTEIN G-T  homolog
           [Homo sapiens], full insert sequence
          Length = 1473

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  tcgccttcgtcaccttcgag 61
           ||||||||||||||||||||
Sbjct: 218 tcgccttcgtcaccttcgag 237
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>emb|Z78015.1|CER02D5 Caenorhabditis elegans Cosmid R02D5, complete sequence
          Length = 41076

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   agatgaagttgccctgaaat 83
            ||||||||||||||||||||
Sbjct: 1906 agatgaagttgccctgaaat 1887
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>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    tatgagggttgaaagatgca 140
              ||||||||||||||||||||
Sbjct: 126646 tatgagggttgaaagatgca 126627


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,092,234
Number of Sequences: 3902068
Number of extensions: 4092234
Number of successful extensions: 73163
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73080
Number of HSP's gapped (non-prelim): 81
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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