| Clone Name | baal2f17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192058.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 6474 Score = 430 bits (217), Expect = e-117 Identities = 352/397 (88%) Strand = Plus / Plus Query: 8 catatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatg 67 |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 4967 catatgagcgagagagtatttcttaccgggatccaaatgagcgtgtaaaagattggaagg 5026 Query: 68 aggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgg 127 | ||||| ||||| ||||| ||||||||||| | | ||||||||||||||||| |||| Sbjct: 5027 aagttgcaattgaatcagtgccagggccactactgaacacacagtctgctcgttgtatgg 5086 Query: 128 attgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaata 187 ||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 5087 attgtggaactcctttctgtcatcaggaaagctcaggtgctggctgtcctcttggaaata 5146 Query: 188 agatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgcc 247 |||| ||||||||||||||| | ||||||||||| ||||||||||||||| | ||||| | Sbjct: 5147 agattccagagttcaatgaactggttcaccagaacagatggcgtgaagcactagatcgtc 5206 Query: 248 tactcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagg 307 | || ||||| |||||||||||||||||||||||| | || ||||||||||| ||||||| Sbjct: 5207 tgcttgagacgaacaacttccctgaatttactggaagagtatgccctgctccctgtgagg 5266 Query: 308 gttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaa 367 | || |||||||||||||||| | | || |||||||| ||||||||||||||||| | | Sbjct: 5267 gatcatgtgttcttggcattattgaaaatccagtatctatcaaaagcatagaatgtgcga 5326 Query: 368 ttatagacaagggttttgaagagggatggatggtacc 404 | |||||||| |||||||||||||||||||||||||| Sbjct: 5327 tcatagacaaaggttttgaagagggatggatggtacc 5363
>dbj|AB008845.1| Oryza sativa mRNA for NADH dependent Glutamate Synthase, complete cds Length = 7037 Score = 430 bits (217), Expect = e-117 Identities = 352/397 (88%) Strand = Plus / Plus Query: 8 catatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatg 67 |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 5255 catatgagcgagagagtatttcttaccgggatccaaatgagcgtgtaaaagattggaagg 5314 Query: 68 aggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgg 127 | ||||| ||||| ||||| ||||||||||| | | ||||||||||||||||| |||| Sbjct: 5315 aagttgcaattgaatcagtgccagggccactactgaacacacagtctgctcgttgtatgg 5374 Query: 128 attgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaata 187 ||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 5375 attgtggaactcctttctgtcatcaggaaagctcaggtgctggctgtcctcttggaaata 5434 Query: 188 agatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgcc 247 |||| ||||||||||||||| | ||||||||||| ||||||||||||||| | ||||| | Sbjct: 5435 agattccagagttcaatgaactggttcaccagaacagatggcgtgaagcactagatcgtc 5494 Query: 248 tactcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagg 307 | || ||||| |||||||||||||||||||||||| | || ||||||||||| ||||||| Sbjct: 5495 tgcttgagacgaacaacttccctgaatttactggaagagtatgccctgctccctgtgagg 5554 Query: 308 gttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaa 367 | || |||||||||||||||| | | || |||||||| ||||||||||||||||| | | Sbjct: 5555 gatcatgtgttcttggcattattgaaaatccagtatctatcaaaagcatagaatgtgcga 5614 Query: 368 ttatagacaagggttttgaagagggatggatggtacc 404 | |||||||| |||||||||||||||||||||||||| Sbjct: 5615 tcatagacaaaggttttgaagagggatggatggtacc 5651
>gb|BT024053.1| Zea mays clone EL01N0438E02 mRNA sequence Length = 2225 Score = 391 bits (197), Expect = e-105 Identities = 345/393 (87%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 7 acatatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaat 66 ||||||||||||||| || |||| ||| | |||||||| |||||||||| ||||||||| Sbjct: 432 acatatgagcgagagagtatttcatacagagatccaaaagagcgtgttagagattggaag 491 Query: 67 gaggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatg 126 || ||||| || || || || || ||||| ||| |||||| ||||||||||||||| Sbjct: 492 gaagttgcaatcgaatctacacctggtccactattaaatacacaatctgctcgttgcatg 551 Query: 127 gattgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaat 186 || ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 552 gactgtggcactcctttctgtcatcaggaaagctcaggtgctggttgtcctcttggaaat 611 Query: 187 aagatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgc 246 ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 612 aagatcccagaattcaatgaattagttcaccagaacagatggcgcgaagcattggatcga 671 Query: 247 ctactcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgag 306 ||||| ||||| ||||||||||||||||| |||||||| || |||||||||||||||||| Sbjct: 672 ctacttgagac-aacaacttccctgaattcactggacgagtttgccctgctccttgtgag 730 Query: 307 ggttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctca 366 || || ||||||||||| |||| | |||| || || || |||||||| |||||||| || Sbjct: 731 gggtcatgtgttcttgggattattgagaatccggtgtctatcaaaagtatagaatgtgca 790 Query: 367 attatagacaagggttttgaagagggatggatg 399 || |||||||| ||||||||||||||||||||| Sbjct: 791 atcatagacaaaggttttgaagagggatggatg 823
>ref|XM_475886.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1830 Score = 369 bits (186), Expect = 5e-99 Identities = 345/398 (86%) Strand = Plus / Plus Query: 9 atatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatga 68 |||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 315 atatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatga 374 Query: 69 ggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgga 128 ||||| ||||| | ||||| ||||||||| ||| || || |||||||| |||||||| Sbjct: 375 agttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatgga 434 Query: 129 ttgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaataa 188 |||||||||||||| |||||||||||| | || |||||||||||||| ||||||||||| Sbjct: 435 ttgtggcactcctttctgtcatcaggagggttctggtgctggttgtcctcttggaaataa 494 Query: 189 gatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgcct 248 ||| || || ||||||||||| ||||| ||||||||||||| |||||| |||||||| || Sbjct: 495 gattcctgaattcaatgaattggttcatcagaatagatggcatgaagccttggatcggct 554 Query: 249 actcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||| ||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 555 acttgagacaaacaatttccctgagtttactggacgagtttgtcctgctccttgtgaggg 614 Query: 309 ttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaat 368 ||| || || |||||||||| | || |||||||| || ||||||||||| ||| | || Sbjct: 615 ttcgtgcgtacttggcattatagacaatccagtatccataaaaagcatagagtgcgccat 674 Query: 369 tatagacaagggttttgaagagggatggatggtaccac 406 |||||||| || ||||||||||||||||||||||||| Sbjct: 675 catagacaaaggatttgaagagggatggatggtaccac 712
>dbj|AK071893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053K07, full insert sequence Length = 1792 Score = 369 bits (186), Expect = 5e-99 Identities = 345/398 (86%) Strand = Plus / Plus Query: 9 atatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatga 68 |||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 10 atatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatga 69 Query: 69 ggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgga 128 ||||| ||||| | ||||| ||||||||| ||| || || |||||||| |||||||| Sbjct: 70 agttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatgga 129 Query: 129 ttgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaataa 188 |||||||||||||| |||||||||||| | || |||||||||||||| ||||||||||| Sbjct: 130 ttgtggcactcctttctgtcatcaggagggttctggtgctggttgtcctcttggaaataa 189 Query: 189 gatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgcct 248 ||| || || ||||||||||| ||||| ||||||||||||| |||||| |||||||| || Sbjct: 190 gattcctgaattcaatgaattggttcatcagaatagatggcatgaagccttggatcggct 249 Query: 249 actcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||| ||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 250 acttgagacaaacaatttccctgagtttactggacgagtttgtcctgctccttgtgaggg 309 Query: 309 ttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaat 368 ||| || || |||||||||| | || |||||||| || ||||||||||| ||| | || Sbjct: 310 ttcgtgcgtacttggcattatagacaatccagtatccataaaaagcatagagtgcgccat 369 Query: 369 tatagacaagggttttgaagagggatggatggtaccac 406 |||||||| || ||||||||||||||||||||||||| Sbjct: 370 catagacaaaggatttgaagagggatggatggtaccac 407
>dbj|AK070485.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049P18, full insert sequence Length = 2257 Score = 369 bits (186), Expect = 5e-99 Identities = 345/398 (86%) Strand = Plus / Plus Query: 9 atatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatga 68 |||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 419 atatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatga 478 Query: 69 ggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgga 128 ||||| ||||| | ||||| ||||||||| ||| || || |||||||| |||||||| Sbjct: 479 agttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatgga 538 Query: 129 ttgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccccttggaaataa 188 |||||||||||||| |||||||||||| | || |||||||||||||| ||||||||||| Sbjct: 539 ttgtggcactcctttctgtcatcaggagggttctggtgctggttgtcctcttggaaataa 598 Query: 189 gatcccagagttcaatgaattagttcaccagaatagatggcgtgaagcattggatcgcct 248 ||| || || ||||||||||| ||||| ||||||||||||| |||||| |||||||| || Sbjct: 599 gattcctgaattcaatgaattggttcatcagaatagatggcatgaagccttggatcggct 658 Query: 249 actcgagacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||| ||||||||||| |||||||| ||||||||||| || || ||||||||||||||||| Sbjct: 659 acttgagacaaacaatttccctgagtttactggacgagtttgtcctgctccttgtgaggg 718 Query: 309 ttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaat 368 ||| || || |||||||||| | || |||||||| || ||||||||||| ||| | || Sbjct: 719 ttcgtgcgtacttggcattatagacaatccagtatccataaaaagcatagagtgcgccat 778 Query: 369 tatagacaagggttttgaagagggatggatggtaccac 406 |||||||| || ||||||||||||||||||||||||| Sbjct: 779 catagacaaaggatttgaagagggatggatggtaccac 816
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 281 bits (142), Expect = 9e-73 Identities = 226/254 (88%) Strand = Plus / Minus Query: 151 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 210 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 28086646 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 28086587 Query: 211 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 270 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 28086586 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 28086527 Query: 271 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 330 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 28086526 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 28086467 Query: 331 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 390 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 28086466 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 28086407 Query: 391 ggatggatggtacc 404 |||||||||||||| Sbjct: 28086406 ggatggatggtacc 28086393 Score = 157 bits (79), Expect = 3e-35 Identities = 130/147 (88%) Strand = Plus / Minus Query: 8 catatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatg 67 |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 28087179 catatgagcgagagagtatttcttaccgggatccaaatgagcgtgtaaaagattggaagg 28087120 Query: 68 aggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgg 127 | ||||| ||||| ||||| ||||||||||| | | ||||||||||||||||| |||| Sbjct: 28087119 aagttgcaattgaatcagtgccagggccactactgaacacacagtctgctcgttgtatgg 28087060 Query: 128 attgtggcactccttactgtcatcagg 154 ||||||| ||||||| ||||||||||| Sbjct: 28087059 attgtggaactcctttctgtcatcagg 28087033
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 281 bits (142), Expect = 9e-73 Identities = 226/254 (88%) Strand = Plus / Minus Query: 151 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 210 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 101845 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 101786 Query: 211 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 270 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 101785 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 101726 Query: 271 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 330 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 101725 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 101666 Query: 331 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 390 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 101665 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 101606 Query: 391 ggatggatggtacc 404 |||||||||||||| Sbjct: 101605 ggatggatggtacc 101592 Score = 157 bits (79), Expect = 3e-35 Identities = 130/147 (88%) Strand = Plus / Minus Query: 8 catatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatg 67 |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 102378 catatgagcgagagagtatttcttaccgggatccaaatgagcgtgtaaaagattggaagg 102319 Query: 68 aggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgg 127 | ||||| ||||| ||||| ||||||||||| | | ||||||||||||||||| |||| Sbjct: 102318 aagttgcaattgaatcagtgccagggccactactgaacacacagtctgctcgttgtatgg 102259 Query: 128 attgtggcactccttactgtcatcagg 154 ||||||| ||||||| ||||||||||| Sbjct: 102258 attgtggaactcctttctgtcatcagg 102232
>dbj|AB001916.1| Oryza sativa gene for NADH-dependent glutamate synthase Length = 17070 Score = 281 bits (142), Expect = 9e-73 Identities = 226/254 (88%) Strand = Plus / Plus Query: 151 caggaaagctcaggtgctggttgtccccttggaaataagatcccagagttcaatgaatta 210 |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | Sbjct: 12389 caggaaagctcaggtgctggctgtcctcttggaaataagattccagagttcaatgaactg 12448 Query: 211 gttcaccagaatagatggcgtgaagcattggatcgcctactcgagacaaacaacttccct 270 ||||||||||| ||||||||||||||| | ||||| || || ||||| |||||||||||| Sbjct: 12449 gttcaccagaacagatggcgtgaagcactagatcgtctgcttgagacgaacaacttccct 12508 Query: 271 gaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaat 330 |||||||||||| | || ||||||||||| |||||||| || |||||||||||||||| | Sbjct: 12509 gaatttactggaagagtatgccctgctccctgtgagggatcatgtgttcttggcattatt 12568 Query: 331 cagaacccagtatcaatcaaaagcatagaatgctcaattatagacaagggttttgaagag 390 | || |||||||| ||||||||||||||||| | || |||||||| |||||||||||| Sbjct: 12569 gaaaatccagtatctatcaaaagcatagaatgtgcgatcatagacaaaggttttgaagag 12628 Query: 391 ggatggatggtacc 404 |||||||||||||| Sbjct: 12629 ggatggatggtacc 12642 Score = 157 bits (79), Expect = 3e-35 Identities = 130/147 (88%) Strand = Plus / Plus Query: 8 catatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatg 67 |||||||||||||| || |||||||||| ||||||||||||||||| ||||||||||| | Sbjct: 11856 catatgagcgagagagtatttcttaccgggatccaaatgagcgtgtaaaagattggaagg 11915 Query: 68 aggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgg 127 | ||||| ||||| ||||| ||||||||||| | | ||||||||||||||||| |||| Sbjct: 11916 aagttgcaattgaatcagtgccagggccactactgaacacacagtctgctcgttgtatgg 11975 Query: 128 attgtggcactccttactgtcatcagg 154 ||||||| ||||||| ||||||||||| Sbjct: 11976 attgtggaactcctttctgtcatcagg 12002
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 238 bits (120), Expect = 1e-59 Identities = 213/244 (87%) Strand = Plus / Plus Query: 163 ggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaat 222 |||||||||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 10063 ggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaat 10122 Query: 223 agatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactgga 282 ||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 10123 agatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactgga 10182 Query: 283 cgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagta 342 || || || |||||||||||||||||||| || || |||||||||| | || |||||| Sbjct: 10183 cgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagta 10242 Query: 343 tcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggta 402 || || ||||||||||| ||| | || |||||||| || ||||||||||||||||||||| Sbjct: 10243 tccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggta 10302 Query: 403 ccac 406 |||| Sbjct: 10303 ccac 10306 Score = 147 bits (74), Expect = 3e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 9 atatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatga 68 |||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 7588 atatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatga 7647 Query: 69 ggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgga 128 ||||| ||||| | ||||| ||||||||| ||| || || |||||||| |||||||| Sbjct: 7648 agttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatgga 7707 Query: 129 ttgtggcactccttactgtcatcagg 154 |||||||||||||| ||||||||||| Sbjct: 7708 ttgtggcactcctttctgtcatcagg 7733
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 238 bits (120), Expect = 1e-59 Identities = 213/244 (87%) Strand = Plus / Plus Query: 163 ggtgctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaat 222 |||||||||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 27413933 ggtgctggttgtcctcttggaaataagattcctgaattcaatgaattggttcatcagaat 27413992 Query: 223 agatggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactgga 282 ||||||| |||||| |||||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 27413993 agatggcatgaagccttggatcggctacttgagacaaacaatttccctgagtttactgga 27414052 Query: 283 cgtgtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagta 342 || || || |||||||||||||||||||| || || |||||||||| | || |||||| Sbjct: 27414053 cgagtttgtcctgctccttgtgagggttcgtgcgtacttggcattatagacaatccagta 27414112 Query: 343 tcaatcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggta 402 || || ||||||||||| ||| | || |||||||| || ||||||||||||||||||||| Sbjct: 27414113 tccataaaaagcatagagtgcgccatcatagacaaaggatttgaagagggatggatggta 27414172 Query: 403 ccac 406 |||| Sbjct: 27414173 ccac 27414176 Score = 147 bits (74), Expect = 3e-32 Identities = 128/146 (87%) Strand = Plus / Plus Query: 9 atatgagcgagagggtgtttcttaccgtgatccaaatgagcgtgttaaagattggaatga 68 |||||||||||||||| ||||||| | ||||||||||||||||| |||||||||||||| Sbjct: 27411458 atatgagcgagagggtacttcttacagagatccaaatgagcgtgtaaaagattggaatga 27411517 Query: 69 ggttgccattgagtcagttccagggccactgataagtacacagtctgctcgttgcatgga 128 ||||| ||||| | ||||| ||||||||| ||| || || |||||||| |||||||| Sbjct: 27411518 agttgcaattgaattggttcctgggccactgctaaagacgcaatctgctcggtgcatgga 27411577 Query: 129 ttgtggcactccttactgtcatcagg 154 |||||||||||||| ||||||||||| Sbjct: 27411578 ttgtggcactcctttctgtcatcagg 27411603
>gb|AF314924.2| Phaseolus vulgaris NADH glutamate synthase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 7050 Score = 155 bits (78), Expect = 1e-34 Identities = 236/289 (81%), Gaps = 6/289 (2%) Strand = Plus / Plus Query: 118 cgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgctggttgtccc 177 ||||||||||| ||||| ||||||| |||||||||||||| ||| ||||||||| Sbjct: 5344 cgttgcatggactgtggtactcctttctgtcatcaggaaaactc------tggttgtcct 5397 Query: 178 cttggaaataagatcccagagttcaatgaattagttcaccagaatagatggcgtgaagca 237 ||||||||||| || ||||| || ||||| ||||| |||| ||||| |||||||||||| Sbjct: 5398 cttggaaataaaataccagaatttaatgagttagtataccaaaataggtggcgtgaagca 5457 Query: 238 ttggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtgtgccctgct 297 |||| | || || |||||||| ||||| || || |||||||| | || ||||| ||| Sbjct: 5458 ctggagaggcttcttgagacaaataactttccagagtttactggtagggtatgcccagct 5517 Query: 298 ccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatcaaaagcata 357 |||||||| ||||||||||| ||||| |||| | |||| |||||||| || ||||||||| Sbjct: 5518 ccttgtgaaggttcttgtgtccttggtattattgagaatccagtatccattaaaagcata 5577 Query: 358 gaatgctcaattatagacaagggttttgaagagggatggatggtaccac 406 |||| | || |||||||| | |||||| ||||| |||||||| |||| Sbjct: 5578 gaatctgccatcatagacaaagcttttgaggagggttggatggtgccac 5626
>ref|NM_124725.2| Arabidopsis thaliana GLT1 AT5G53460 (GLT1) mRNA, complete cds Length = 6627 Score = 133 bits (67), Expect = 5e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 109 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 168 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 5221 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 5274 Query: 169 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 228 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 5275 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 5334 Query: 229 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 288 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 5335 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 5394 Query: 289 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 348 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 5395 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 5454 Query: 349 aaaagcatagaatg 362 |||||||| ||||| Sbjct: 5455 aaaagcattgaatg 5468
>dbj|AK222185.1| Arabidopsis thaliana mRNA for NADH-dependent glutamate synthase, complete cds, clone: RAFL24-12-H17 Length = 1868 Score = 133 bits (67), Expect = 5e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 109 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 168 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 48 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 101 Query: 169 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 228 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 102 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 161 Query: 229 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 288 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 162 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 221 Query: 289 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 348 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 222 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 281 Query: 349 aaaagcatagaatg 362 |||||||| ||||| Sbjct: 282 aaaagcattgaatg 295
>emb|BX832353.1|CNS09ZNJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZD02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2076 Score = 133 bits (67), Expect = 5e-28 Identities = 207/254 (81%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 109 cagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggtgct 168 ||||| |||||||||||||||||||| ||||| | ||| || ||||| | ||| | Sbjct: 379 cagtcagctcgttgcatggattgtggaactccattctgccaccaggagaactc------t 432 Query: 169 ggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagatgg 228 || ||||| || || ||||||||||| || ||||||||| | || ||||||| |||||| Sbjct: 433 gggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagatgg 492 Query: 229 cgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtgtg 288 | ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || || Sbjct: 493 caagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgagta 552 Query: 289 tgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaatc 348 |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || ||| Sbjct: 553 tgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttctatc 612 Query: 349 aaaagcatagaatg 362 |||||||| ||||| Sbjct: 613 aaaagcattgaatg 626
>dbj|AB020754.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYN8 Length = 54528 Score = 127 bits (64), Expect = 3e-26 Identities = 163/196 (83%) Strand = Plus / Plus Query: 167 ctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaatagat 226 |||| ||||| || || ||||||||||| || ||||||||| | || ||||||| |||| Sbjct: 48584 ctgggtgtcctctcggtaataagatccctgaattcaatgaacttgtctaccagaacagat 48643 Query: 227 ggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgtg 286 ||| ||||| ||| |||| ||||| |||||||||||||| || ||||||||||| || | Sbjct: 48644 ggcaagaagccttgaatcgtctacttgagacaaacaactttccagaatttactgggcgag 48703 Query: 287 tgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatcaa 346 | |||||||| || ||||| ||||||||||||||||| || | | ||||||| || || | Sbjct: 48704 tatgccctgcaccatgtgaaggttcttgtgttcttggaataattgagaaccctgtttcta 48763 Query: 347 tcaaaagcatagaatg 362 |||||||||| ||||| Sbjct: 48764 tcaaaagcattgaatg 48779 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 109 cagtctgctcgttgcatggattgtggcactcc 140 ||||| |||||||||||||||||||| ||||| Sbjct: 48378 cagtcagctcgttgcatggattgtggaactcc 48409
>gb|AF314925.2| Phaseolus vulgaris NADH glutamate synthase precursor, mRNA, complete cds; nuclear gene for chloroplast product Length = 7408 Score = 123 bits (62), Expect = 5e-25 Identities = 241/301 (80%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 106 acacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaagctcaggt 165 |||||||| || ||||||||||| ||||| || |||| |||||||||||||| || Sbjct: 5590 acacagtcagcccgttgcatggactgtggtacccctttctgtcatcaggaaaattc---- 5645 Query: 166 gctggttgtccccttggaaataagatcccagagttcaatgaattagttcaccagaataga 225 ||| ||||| ||||||||||| || ||||| || ||||| |||| |||| ||||| Sbjct: 5646 --tggatgtcctcttggaaataaaataccagaatttaatgagctagtataccaaaatagg 5703 Query: 226 tggcgtgaagcattggatcgcctactcgagacaaacaacttccctgaatttactggacgt 285 ||| | |||||||| || | || || || ||||| ||||| || ||||||||||| || Sbjct: 5704 tggagggaagcattagagaggcttcttgaaacaaataactttcccgaatttactggtcgg 5763 Query: 286 gtgtgccctgctccttgtgagggttcttgtgttcttggcattaatcagaacccagtatca 345 || ||||| || |||||||| ||||||||||| ||||| |||| | ||||||| ||||| Sbjct: 5764 gtatgcccagcaccttgtgaaggttcttgtgtccttggtattattgagaaccccgtatcc 5823 Query: 346 atcaaaagcatagaatgctcaattatagacaagggttttgaagagggatggatggtacca 405 || |||||||| ||||| | || |||||||||| |||||| ||||| |||||||| ||| Sbjct: 5824 attaaaagcattgaatgtgccataatagacaaggcttttgaggagggttggatggtgcca 5883 Query: 406 c 406 | Sbjct: 5884 c 5884
>gb|DQ489494.1| Campylobacter jejuni subsp. jejuni 81-176 probable glutamate synthase (NADPH) large subunit (gltB) and probable glutamate synthase (NADPH) small subunit (gltD) genes, complete cds; and unknown gene Length = 7725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 268 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 317 |||||||||||||| ||||| ||||||||||||||||||| ||||||||| Sbjct: 6574 cctgaatttactggccgtgtttgccctgctccttgtgaggattcttgtgt 6623
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 268 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 317 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 12936 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 12985
>gb|DQ202384.1| Campylobacter jejuni strain 81116 glutamate synthase (NADPH) small subunit (gltD), ribonuclease HII (rnhB), putative non-specific DNA binding protein, non-heme iron protein, dihydroxy-acid dehydratase (ilvD), putative integral membrane protein, hypothetical protein, and putative transcriptional regulatory protein genes, complete cds; and putative ATP/GTP binding protein gene, partial cds Length = 8394 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 268 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 317 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 310 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 359
>ref|XM_657646.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5134.2), mRNA Length = 6435 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||||| |||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 5155 aacaatttccctgagtttactggccgtgtctgccctgctccttgtgaggg 5204
>emb|AL139074.2|CJ11168X1 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 1/6 Length = 314150 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 268 cctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 317 ||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 14692 cctgaatttaccggtcgtgtttgccctgctccttgtgaggattcttgtgt 14741
>gb|L01660.1|ALFNADHSYN Medicago sativa NADH-glutamate synthase mRNA, comlete cds Length = 7174 Score = 63.9 bits (32), Expect = 4e-07 Identities = 116/144 (80%) Strand = Plus / Plus Query: 256 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 315 ||||||||||| ||||| || ||||| || || |||||||| |||||||| ||||||||| Sbjct: 5526 acaaacaactttcctgagttcactgggcgggtttgccctgcaccttgtgaaggttcttgt 5585 Query: 316 gttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagac 375 || || || |||| | |||| ||||| || || |||| || ||||| | || || ||| Sbjct: 5586 gtcctcggtattattgagaatccagtttctattaaaaatattgaatgtgctatcattgac 5645 Query: 376 aagggttttgaagagggatggatg 399 |||| |||||| ||||| |||||| Sbjct: 5646 aaggcttttgaggagggttggatg 5669 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 106 acacagtctgctcgttgcatggattgtggcactccttactgtcatcaggaaa 157 ||||||||||| ||||||||||| ||||| ||||| | ||||||||||||| Sbjct: 5382 acacagtctgcccgttgcatggactgtggtactccattttgtcatcaggaaa 5433
>gb|L37606.1|ALFNDGS Medicago sativa (clone GG16-1) NADH-dependent glutamate synthase gene, complete cds Length = 14306 Score = 63.9 bits (32), Expect = 4e-07 Identities = 116/144 (80%) Strand = Plus / Plus Query: 256 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 315 ||||||||||| ||||| || ||||| || || |||||||| |||||||| ||||||||| Sbjct: 11923 acaaacaactttcctgagttcactgggcgggtttgccctgcaccttgtgaaggttcttgt 11982 Query: 316 gttcttggcattaatcagaacccagtatcaatcaaaagcatagaatgctcaattatagac 375 || || || |||| | |||| ||||| || || |||| || ||||| | || || ||| Sbjct: 11983 gtcctcggtattattgagaatccagtttctattaaaaatattgaatgtgctatcattgac 12042 Query: 376 aagggttttgaagagggatggatg 399 |||| |||||| ||||| |||||| Sbjct: 12043 aaggcttttgaggagggttggatg 12066 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 106 acacagtctgctcgttgcatggattgtggcactccttactgtcatcagg 154 ||||||||||| ||||||||||| ||||| ||||| | |||||||||| Sbjct: 11681 acacagtctgcccgttgcatggactgtggtactccattttgtcatcagg 11729
>ref|XM_381609.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01433.1) partial mRNA Length = 6342 Score = 60.0 bits (30), Expect = 6e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 318 ||||||||||| || || || || ||||| |||||||||||||| |||||| |||||||| Sbjct: 5077 aacaacttccccgagttcaccggccgtgtctgccctgctccttgcgagggtgcttgtgtt 5136 Query: 319 ct 320 || Sbjct: 5137 ct 5138 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Plus Query: 112 tctgctcgttgcatggattgtgg 134 ||||||||||||||||||||||| Sbjct: 4939 tctgctcgttgcatggattgtgg 4961
>ref|XM_952074.1| Neurospora crassa OR74A probable glutamate synthase [MIPS] (NCU01744.1) partial mRNA Length = 6351 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 314 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 5095 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 5150
>ref|XM_328182.1| Neurospora crassa OR74A probable glutamate synthase [MIPS] (NCU01744.1) partial mRNA Length = 6351 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 314 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 5095 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 5150
>emb|CR378664.1| Photobacterium profundum SS9; segment 2/12 Length = 347994 Score = 56.0 bits (28), Expect = 9e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 262 aacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 |||||||||||||||||||| ||||| || || ||||||||||| Sbjct: 232996 aacttccctgaatttactggtcgtgtatgtccagctccttgtga 232953
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttg 314 ||||||||||| || |||||||| || || |||||||||||||| |||||| |||| Sbjct: 14366 aacaacttccccgagtttactggtcgcgtttgccctgctccttgcgagggtgcttg 14311
>emb|AM056054.1| Fusarium fujikuroi gltA gene for glutamate synthase, exons 1-3, strain IMI58289 Length = 8741 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgt 317 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||| ||||||| Sbjct: 6470 aacaacttcccggagttcactggtcgtgtttgcccggctccttgcgagggtgcttgtgt 6528
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 |||||||||||||| || ||||| ||||| |||||||| |||||||| Sbjct: 2561485 aacaacttccctgagttcactggccgtgtctgccctgccccttgtga 2561439
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 254 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 313 |||||||||| ||||||||||| ||||| || || || || || ||||||||||| |||| Sbjct: 2111376 agacaaacaatttccctgaattcactgggcgggtctgtccggcgccttgtgagggctctt 2111317 Query: 314 gt 315 || Sbjct: 2111316 gt 2111315
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 254 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 313 |||||||||| ||||||||||| ||||| || || || || || ||||||||||| |||| Sbjct: 2112220 agacaaacaatttccctgaattcactgggcgggtctgtccggcgccttgtgagggctctt 2112161 Query: 314 gt 315 || Sbjct: 2112160 gt 2112159
>ref|XM_754904.1| Ustilago maydis 521 hypothetical protein (UM03850.1) partial mRNA Length = 6507 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||||||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 5221 aacaacttccccgagttcactggtcgtgtctgccctgctccttgcgaggg 5270 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 373 gacaagggttttgaagagggatggatggtacc 404 |||||||| ||||| ||||| ||||||||||| Sbjct: 5335 gacaagggctttgaggagggttggatggtacc 5366
>gb|AE017350.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 10, complete sequence Length = 1085720 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 254 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 313 ||||||||||||| || || |||||||| || || ||||||||||| || ||| || ||| Sbjct: 894736 agacaaacaactttcccgagtttactggccgcgtctgccctgctccgtgcgagagtgctt 894677 Query: 314 gtgt 317 |||| Sbjct: 894676 gtgt 894673
>ref|XM_567571.1| Cryptococcus neoformans var. neoformans JEC21 glutamate synthase (NADH) (CNJ02910) partial mRNA Length = 6665 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Plus Query: 254 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 313 ||||||||||||| || || |||||||| || || ||||||||||| || ||| || ||| Sbjct: 5063 agacaaacaactttcccgagtttactggccgcgtctgccctgctccgtgcgagagtgctt 5122 Query: 314 gtgt 317 |||| Sbjct: 5123 gtgt 5126
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 262 aacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 ||||||||||| || ||||| ||||||||||| || |||||||| Sbjct: 775601 aacttccctgagttcactgggcgtgtgtgcccagcaccttgtga 775644
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 262 aacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 ||||| ||||| |||||||| ||||| ||||| || ||||||||||| Sbjct: 158223 aactttcctgagtttactgggcgtgtatgcccagccccttgtgaggg 158269
>gb|AE004307.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 215 of 251 of the complete chromosome Length = 14930 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 ||||||||||| || ||||| || ||||| |||||||| |||||||| Sbjct: 13357 aacaacttcccagagtttaccggtcgtgtctgccctgcaccttgtga 13403
>ref|XM_964960.1| PREDICTED: Tribolium castaneum similar to CG9674-PA, isoform A (LOC658584), mRNA Length = 6647 Score = 46.1 bits (23), Expect = 0.088 Identities = 41/47 (87%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 ||||||||||| || |||||||||||||| || || ||||| ||||| Sbjct: 4852 aacaacttccccgagtttactggacgtgtatgtccagctccgtgtga 4898
>emb|AL590605.1|SPAPB1E7 S.pombe chromosome I BAC pB1E7 Length = 41788 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Plus Query: 271 gaatttactggacgtgtgtgccctgctccttgtga 305 |||||||| || ||||| ||||||||||||||||| Sbjct: 26685 gaatttacaggccgtgtctgccctgctccttgtga 26719
>ref|NM_001019557.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAPB1E7.07), partial mRNA Length = 6336 Score = 46.1 bits (23), Expect = 0.088 Identities = 32/35 (91%) Strand = Plus / Plus Query: 271 gaatttactggacgtgtgtgccctgctccttgtga 305 |||||||| || ||||| ||||||||||||||||| Sbjct: 5107 gaatttacaggccgtgtctgccctgctccttgtga 5141
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 46.1 bits (23), Expect = 0.088 Identities = 59/71 (83%) Strand = Plus / Minus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 318 ||||||||||| || |||||||| || || || || ||||||||||| || | ||||| Sbjct: 494215 aacaacttcccggagtttactggtcgagtttgtcccgctccttgtgaaagtgcatgtgtg 494156 Query: 319 cttggcattaa 329 ||||||||||| Sbjct: 494155 cttggcattaa 494145
>ref|XM_382004.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01828.1) partial mRNA Length = 936 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 372 agacaagggttttgaagaggga 393 |||||||||||||||||||||| Sbjct: 837 agacaagggttttgaagaggga 858
>ref|XM_501118.1| Yarrowia lipolytica CLIB122, YALI0B19998g predicted mRNA Length = 6360 Score = 44.1 bits (22), Expect = 0.35 Identities = 52/62 (83%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 318 ||||||||||| || || |||||||| | || || ||||||||||||||| | |||||| Sbjct: 5113 aacaacttccccgagttcactggacgaatctgtcccgctccttgtgagggtgcctgtgtt 5172 Query: 319 ct 320 || Sbjct: 5173 ct 5174
>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13 Contains a novel gene, the gene for a novel protein (LOC374960), a ribosomal protein S14 (RPS14) pseudogene, the NBL1 gene for neuroblastoma suppression of tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine (serotonin) receptor 6, the 3' end of the gene for a novel protein (LOC255104) (FLJ45636) and two CpG islands, complete sequence Length = 163848 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agacaaacaacttccctgaatt 275 |||||||||||||||||||||| Sbjct: 127795 agacaaacaacttccctgaatt 127774
>emb|Z99113.2|BSUB0010 Bacillus subtilis complete genome (section 10 of 21): from 1807106 to 2014934 Length = 207829 Score = 44.1 bits (22), Expect = 0.35 Identities = 43/50 (86%) Strand = Plus / Minus Query: 256 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtga 305 ||||||||||| |||||||| || || || || ||||| ||||||||||| Sbjct: 201876 acaaacaactttcctgaattcacagggcgggtatgccccgctccttgtga 201827
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.35 Identities = 52/62 (83%) Strand = Plus / Minus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 318 ||||||||||| || || |||||||| | || || ||||||||||||||| | |||||| Sbjct: 2627534 aacaacttccccgagttcactggacgaatctgtcccgctccttgtgagggtgcctgtgtt 2627475 Query: 319 ct 320 || Sbjct: 2627474 ct 2627473
>gb|AC130674.7| Mus musculus chromosome 1, clone RP24-98E13, complete sequence Length = 167746 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cccagtatcaatcaaaagcat 356 ||||||||||||||||||||| Sbjct: 70913 cccagtatcaatcaaaagcat 70893
>gb|AY623407.1| Aedes aegypti glutamate synthase (GOGAT) mRNA, partial cds Length = 5871 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/53 (84%) Strand = Plus / Plus Query: 256 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgaggg 308 |||||||||||||| ||||| || ||||| || || || |||||||| ||||| Sbjct: 4198 acaaacaacttcccagaattcacgggacgagtatgtccagctccttgcgaggg 4250
>gb|AC063943.23| Homo sapiens 12 BAC RP11-18C24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137242 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 tatcaatcaaaagcatagaat 361 ||||||||||||||||||||| Sbjct: 46596 tatcaatcaaaagcatagaat 46576
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 gctcgttgcatggattgtggc 135 ||||||||||||||||||||| Sbjct: 1779779 gctcgttgcatggattgtggc 1779759
>dbj|D85230.1|PEEGLTD Plectonema boryanum URF141, ORF243, NADH-dependent glutamate synthase large subunit (gltB) and small subunit (gltD) and URF289 genes, partial and complete cds Length = 9036 Score = 42.1 bits (21), Expect = 1.4 Identities = 57/69 (82%) Strand = Plus / Plus Query: 259 aacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgtgtt 318 ||||| ||||| ||||| ||||| || || || |||||||||||||| || || ||||| Sbjct: 6916 aacaatttccccgaattcactgggcgggtctgtcctgctccttgtgaagggtcgtgtgta 6975 Query: 319 cttggcatt 327 || |||||| Sbjct: 6976 ctcggcatt 6984
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 ttgtgttcttggcattaatc 331 |||||||||||||||||||| Sbjct: 3504065 ttgtgttcttggcattaatc 3504046
>gb|AC121918.3| Mus musculus BAC clone RP24-195D23 from chromosome 2, complete sequence Length = 179270 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ggttcttgtgttcttggcat 326 |||||||||||||||||||| Sbjct: 107206 ggttcttgtgttcttggcat 107225
>gb|DQ334249.1| Drosophila miranda CG9674 gene, partial cds Length = 1008 Score = 40.1 bits (20), Expect = 5.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 254 agacaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttctt 313 |||| ||||||||||| || ||||| ||||| || ||||| ||||| || ||||| || | Sbjct: 800 agacgaacaacttccccgagtttacgggacgcgtctgcccggctccctgcgagggctcct 859 Query: 314 gtgt 317 |||| Sbjct: 860 gtgt 863
>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains the genes for olfactory receptor MOR135-14 and -3 , two olfactory receptor MOR135 pseudogenes, the gene for a novel olfactory receptor family MOR135 member, a zinc finger protein pseudogene, the 5' end of the gene for a novel KRAB box domain containing protein and a CpG island, complete sequence Length = 194873 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cagtatcaatcaaaagcata 357 |||||||||||||||||||| Sbjct: 142268 cagtatcaatcaaaagcata 142287
>emb|BX251410.1| Tropheryma whipplei TW08/27, complete genome; segment 1/3 Length = 324050 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gttcaccagaatagatggcgtgaa 234 ||||||||||||||| |||||||| Sbjct: 179702 gttcaccagaatagacggcgtgaa 179725
>emb|AL603913.14| Mouse DNA sequence from clone RP23-103H9 on chromosome 11 Contains the gene for a novel protein (3732413I11Rik), a novel gene (4930597A21Rik), the 5' end of the Ebf1 gene for early B-cell factor 1, a novel gene and a CpG island, complete sequence Length = 215524 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 143 actgtcatcaggaaagctcaggtgctgg 170 |||||||| ||||| ||||||||||||| Sbjct: 85857 actgtcataaggaaggctcaggtgctgg 85884
>emb|BX321884.15| Zebrafish DNA sequence from clone DKEYP-29A10 in linkage group 3, complete sequence Length = 173019 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 345 aatcaaaagcatagaatgctcaattata 372 ||||||||||||| |||| ||||||||| Sbjct: 15426 aatcaaaagcataaaatgttcaattata 15399
>gb|AC068902.20| Mus musculus clone rp23-151l10, complete sequence Length = 199514 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 cagtatcaatcaaaagcata 357 |||||||||||||||||||| Sbjct: 74347 cagtatcaatcaaaagcata 74366
>gb|AF462032.1| Tuber borchii glutamate synthase mRNA, partial cds Length = 350 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 289 tgccctgctccttgtgagggttcttgtgttct 320 ||||| ||||||||||| ||| |||||||||| Sbjct: 136 tgcccagctccttgtgaaggtgcttgtgttct 167
>gb|AE014184.1| Tropheryma whipplei str. Twist, complete genome Length = 927303 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 gttcaccagaatagatggcgtgaa 234 ||||||||||||||| |||||||| Sbjct: 180213 gttcaccagaatagacggcgtgaa 180236
>emb|CR318631.5| Zebrafish DNA sequence from clone DKEY-207D5 in linkage group 18, complete sequence Length = 189711 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 349 aaaagcatagaatgctcaattata 372 ||||||| |||||||||||||||| Sbjct: 104906 aaaagcacagaatgctcaattata 104883
>emb|BX649507.3| Zebrafish DNA sequence from clone CH211-154H20 in linkage group 18, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 aaaagcatagaatgctcaattata 372 ||||||| |||||||||||||||| Sbjct: 50018 aaaagcacagaatgctcaattata 50041
>emb|BX000347.7| Zebrafish DNA sequence from clone DKEY-66C4 in linkage group 18, complete sequence Length = 155713 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 aaaagcatagaatgctcaattata 372 ||||||| |||||||||||||||| Sbjct: 60095 aaaagcacagaatgctcaattata 60118
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 40.1 bits (20), Expect = 5.4 Identities = 56/68 (82%) Strand = Plus / Plus Query: 256 acaaacaacttccctgaatttactggacgtgtgtgccctgctccttgtgagggttcttgt 315 ||||| ||||| || ||||||||||| || || || || ||||||||||| || | ||| Sbjct: 2372097 acaaataactttccagaatttactggtcgagtatgtccagctccttgtgaaagtgcctgt 2372156 Query: 316 gttcttgg 323 |||||||| Sbjct: 2372157 gttcttgg 2372164
>emb|AL732541.11| Mouse DNA sequence from clone RP23-306D20 on chromosome 2, complete sequence Length = 213918 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ggttcttgtgttcttggcat 326 |||||||||||||||||||| Sbjct: 208140 ggttcttgtgttcttggcat 208121
>gb|L11870.1|AEOABCA Aeromonas salmonicida AbcA protein (regulating A-protein expression) gene, complete cds Length = 927 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ccctgaatttactggacgtg 286 |||||||||||||||||||| Sbjct: 297 ccctgaatttactggacgtg 316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,275,237 Number of Sequences: 3902068 Number of extensions: 3275237 Number of successful extensions: 55780 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55510 Number of HSP's gapped (non-prelim): 258 length of query: 406 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 384 effective length of database: 17,147,199,772 effective search space: 6584524712448 effective search space used: 6584524712448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)