ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2f05 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 55.5 bits (132), Expect = 4e-08 Identities = 25/25 (100%), Positives = 25/25 (100%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 ACADSRVCPSVTLGLEPGEAFTIRN Sbjct: 164 ACADSRVCPSVTLGLEPGEAFTIRN 188
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 42.4 bits (98), Expect = 4e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 151 ACSDSRVCPSHVLNFQPGEAFVVRN 175
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 160 ACSDSRVCPSHVLDFQPGEAFVVRN 184
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 160 ACSDSRVCPSHVLDFQPGEAFVVRN 184
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 160 ACSDSRVCPSHVLDFQPGEAFVVRN 184
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 158 ACSDSRVCPSHVLDFQPGEAFVVRN 182
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 159 ACSDSRVCPSHVLDFQPGEAFVVRN 183
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 149 ACSDSRVCPSHVLDFQPGEAFMVRN 173
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 41.6 bits (96), Expect = 6e-04 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PGEAF +RN Sbjct: 20 ACSDSRVCPSHILDFQPGEAFVVRN 44
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 40.8 bits (94), Expect = 0.001 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L +PG+AF +RN Sbjct: 166 ACSDSRVCPSHVLDFQPGDAFVVRN 190
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 40.0 bits (92), Expect = 0.002 Identities = 16/25 (64%), Positives = 19/25 (76%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 AC+DSRVCPS L PG+AF +RN Sbjct: 89 ACSDSRVCPSHVLDFHPGDAFVVRN 113
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 34.3 bits (77), Expect = 0.10 Identities = 13/25 (52%), Positives = 18/25 (72%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 +C DSRV P++ G +PGE + IRN Sbjct: 37 SCVDSRVVPNLITGTQPGELYVIRN 61
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 31.2 bits (69), Expect = 0.88 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 +C+DSR+ P + EPG+ F IRN Sbjct: 38 SCSDSRLVPELVTQREPGDLFVIRN 62
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 31.2 bits (69), Expect = 0.88 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 +C+DSR+ P + EPG+ F IRN Sbjct: 38 SCSDSRLVPELVTQREPGDLFVIRN 62
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 30.8 bits (68), Expect = 1.1 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 2 ACADSRVCPSVTLGLEPGEAFTIRN 76 +C DSRV P++ G +PGE + I N Sbjct: 37 SCVDSRVVPNLITGTKPGELYVICN 61
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 30.0 bits (66), Expect = 2.0 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +2 Query: 5 CADSRVCPSVTLGLEPGEAFTIRN 76 C+DSRV GLEPGE F RN Sbjct: 42 CSDSRVPAERLTGLEPGELFVHRN 65
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 30.0 bits (66), Expect = 2.0 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +2 Query: 5 CADSRVCPSVTLGLEPGEAFTIRN 76 C+DSRV GLEPGE F RN Sbjct: 42 CSDSRVPAERLTGLEPGELFVHRN 65
>SYA_RHIME (P27866) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 887 Score = 28.5 bits (62), Expect = 5.7 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -3 Query: 76 VADGEGLTGLKAQGDRRAHTRV 11 +A E TG+KA+GDRRA RV Sbjct: 254 IAASEEATGVKAEGDRRASHRV 275
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 28.1 bits (61), Expect = 7.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +2 Query: 5 CADSRVCPSVTLGLEPGEAFTIRN 76 C+DSRV LEPGE F RN Sbjct: 42 CSDSRVPAEKLTNLEPGELFVHRN 65
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 27.7 bits (60), Expect = 9.7 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = +2 Query: 5 CADSRVCPSVTLGLEPGEAFTIRN 76 C+DSRV P++ E G+ F IRN Sbjct: 39 CSDSRVDPNLITQSEVGDLFVIRN 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,461,062 Number of Sequences: 219361 Number of extensions: 114265 Number of successful extensions: 378 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 375 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 378 length of database: 80,573,946 effective HSP length: 1 effective length of database: 80,354,585 effective search space used: 1928510040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
