ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, compl... 155 2e-35
2ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predic... 96 2e-17
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-17
4dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-17
5dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-17
6dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 2e-17
7gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, c... 96 2e-17
8gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase... 96 2e-17
9dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, comple... 96 2e-17
10gb|AY504075.1| Sorghum bicolor clone 1233-SC0706 RFLP probe pSB1233 84 6e-14
11gb|AY504074.1| Sorghum bicolor clone 1233-SC0599 RFLP probe pSB1233 84 6e-14
12gb|AY504073.1| Sorghum bicolor clone 1233-SC0326 RFLP probe pSB1233 84 6e-14
13gb|AY504072.1| Sorghum bicolor clone 1233-SC0155 RFLP probe pSB1233 84 6e-14
14gb|AY504071.1| Sorghum bicolor clone 1233-SC0033 RFLP probe pSB1233 84 6e-14
15gb|AY504070.1| Sorghum bicolor clone 1233-RTx430 RFLP probe pSB1233 84 6e-14
16gb|AY504069.1| Sorghum arundinaceum clone 1233-LWA8 RFLP probe p... 84 6e-14
17gb|AY504068.1| Sorghum arundinaceum clone 1233-LWA4 RFLP probe p... 84 6e-14
18gb|AY504067.1| Sorghum bicolor clone 1233-92381 RFLP probe pSB1233 84 6e-14
19gb|AY504066.1| Sorghum bicolor clone 1233-82459 RFLP probe pSB1233 84 6e-14
20gb|AY504065.1| Sorghum bicolor clone 1233-77034 RFLP probe pSB1233 84 6e-14
21gb|AY504064.1| Sorghum bicolor clone 1233-56174 RFLP probe pSB1233 84 6e-14
22gb|AY504063.1| Sorghum bicolor clone 1233-56003 RFLP probe pSB1233 84 6e-14
23gb|AY504062.1| Sorghum bicolor clone 1233-514605 RFLP probe pSB1233 84 6e-14
24gb|AY504061.1| Sorghum bicolor clone 1233-51030 RFLP probe pSB1233 84 6e-14
25gb|AY504060.1| Sorghum bicolor clone 1233-50875 RFLP probe pSB1233 84 6e-14
26gb|AY504059.1| Sorghum bicolor clone 1233-257595 RFLP probe pSB1233 84 6e-14
27gb|AY504057.1| Sorghum bicolor clone 1233-22913 RFLP probe pSB1233 84 6e-14
28gb|AY504056.1| Sorghum arundinaceum clone 1233-225905 RFLP probe... 84 6e-14
29gb|AY504055.1| Sorghum bicolor clone 1233-195684 RFLP probe pSB1233 84 6e-14
30gb|AY504054.1| Sorghum bicolor clone 1233-152702 RFLP probe pSB1233 84 6e-14
31gb|AY504053.1| Sorghum bicolor clone 1233-102069 RFLP probe pSB1233 84 6e-14
32gb|AY504052.1| Sorghum bicolor clone 1233-BTx406 RFLP probe pSB1233 84 6e-14
33gb|AY504051.1| Sorghum bicolor clone 1233-BTx3197 RFLP probe pSB... 84 6e-14
34gb|AY109373.1| Zea mays CL2331_1 mRNA sequence 76 1e-11
35gb|AY109272.1| Zea mays PCO064414 mRNA sequence 76 1e-11
36gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase m... 76 1e-11
37gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds 76 1e-11
38gb|AY504058.1| Sorghum bicolor clone 1233-246712 RFLP probe pSB1233 70 9e-10
39gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mR... 64 6e-08
40gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mR... 64 6e-08
41gb|AY107300.1| Zea mays PCO064410 mRNA sequence 60 9e-07
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 3.2
43gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 38 3.2
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 3.2
45gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 3.2 
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds
          Length = 1529

 Score =  155 bits (78), Expect = 2e-35
 Identities = 78/78 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgcgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cgcgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggc 794

                             
Query: 61  cttcaccatccgcaacat 78
           ||||||||||||||||||
Sbjct: 795 cttcaccatccgcaacat 812
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>ref|NM_192260.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
           ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 335 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 394

                           
Query: 63  tcaccatccgcaacat 78
           ||||| ||||||||||
Sbjct: 395 tcaccgtccgcaacat 410
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                            
Query: 3        cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
                ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 25697079 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 25697138

                                
Query: 63       tcaccatccgcaacat 78
                ||||| ||||||||||
Sbjct: 25697139 tcaccgtccgcaacat 25697154
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>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004A09
          Length = 158826

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                          
Query: 3      cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
              ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 143885 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 143944

                              
Query: 63     tcaccatccgcaacat 78
              ||||| ||||||||||
Sbjct: 143945 tcaccgtccgcaacat 143960
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>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full
           insert sequence
          Length = 1163

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
           ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 385 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 444

                           
Query: 63  tcaccatccgcaacat 78
           ||||| ||||||||||
Sbjct: 445 tcaccgtccgcaacat 460
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>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full
           insert sequence
          Length = 1165

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
           ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 384 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 443

                           
Query: 63  tcaccatccgcaacat 78
           ||||| ||||||||||
Sbjct: 444 tcaccgtccgcaacat 459
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>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds
          Length = 1169

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
           ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 379 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 438

                           
Query: 63  tcaccatccgcaacat 78
           ||||| ||||||||||
Sbjct: 439 tcaccgtccgcaacat 454
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>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds
          Length = 1148

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 3   cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
           ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 370 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 429

                           
Query: 63  tcaccatccgcaacat 78
           ||||| ||||||||||
Sbjct: 430 tcaccgtccgcaacat 445
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>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds
          Length = 8532

 Score = 95.6 bits (48), Expect = 2e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                        
Query: 3    cgtgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggcct 62
            ||||||||||||| || |||||||||||||| ||| ||||||| |||||||| |||||||
Sbjct: 6660 cgtgcgccgactctcgcgtgtgcccgtcggtgaccatgggcctggagcccggcgaggcct 6719

                            
Query: 63   tcaccatccgcaacat 78
            ||||| ||||||||||
Sbjct: 6720 tcaccgtccgcaacat 6735
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>gb|AY504075.1| Sorghum bicolor clone 1233-SC0706 RFLP probe pSB1233
          Length = 313

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504074.1| Sorghum bicolor clone 1233-SC0599 RFLP probe pSB1233
          Length = 306

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 142 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 201

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 202 accgtccgcaacat 215
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>gb|AY504073.1| Sorghum bicolor clone 1233-SC0326 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504072.1| Sorghum bicolor clone 1233-SC0155 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504071.1| Sorghum bicolor clone 1233-SC0033 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504070.1| Sorghum bicolor clone 1233-RTx430 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504069.1| Sorghum arundinaceum clone 1233-LWA8 RFLP probe pSB1233
          Length = 313

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504068.1| Sorghum arundinaceum clone 1233-LWA4 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504067.1| Sorghum bicolor clone 1233-92381 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504066.1| Sorghum bicolor clone 1233-82459 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504065.1| Sorghum bicolor clone 1233-77034 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504064.1| Sorghum bicolor clone 1233-56174 RFLP probe pSB1233
          Length = 306

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 142 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 201

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 202 accgtccgcaacat 215
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>gb|AY504063.1| Sorghum bicolor clone 1233-56003 RFLP probe pSB1233
          Length = 306

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 142 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 201

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 202 accgtccgcaacat 215
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>gb|AY504062.1| Sorghum bicolor clone 1233-514605 RFLP probe pSB1233
          Length = 313

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504061.1| Sorghum bicolor clone 1233-51030 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504060.1| Sorghum bicolor clone 1233-50875 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504059.1| Sorghum bicolor clone 1233-257595 RFLP probe pSB1233
          Length = 313

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504057.1| Sorghum bicolor clone 1233-22913 RFLP probe pSB1233
          Length = 313

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504056.1| Sorghum arundinaceum clone 1233-225905 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504055.1| Sorghum bicolor clone 1233-195684 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504054.1| Sorghum bicolor clone 1233-152702 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504053.1| Sorghum bicolor clone 1233-102069 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504052.1| Sorghum bicolor clone 1233-BTx406 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY504051.1| Sorghum bicolor clone 1233-BTx3197 RFLP probe pSB1233
          Length = 314

 Score = 83.8 bits (42), Expect = 6e-14
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   tgcgccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttc 64
           ||||| ||||| ||||||||||||||||| |||||||||||   |||||| |||||||||
Sbjct: 150 tgcgctgactcccgtgtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttc 209

                         
Query: 65  accatccgcaacat 78
           ||| ||||||||||
Sbjct: 210 accgtccgcaacat 223
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>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence
          Length = 2552

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9    ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
            ||||||| ||||||||||||||||| || ||||||||  ||||||| |||||||||||| 
Sbjct: 1160 ccgactcccgtgtgtgcccgtcggtgacactgggcctgcagcccggcgaggccttcaccg 1219

                      
Query: 69   tccgcaacat 78
            | ||||||||
Sbjct: 1220 ttcgcaacat 1229



 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| || |||||||||||||| || ||||| ||  ||||||| ||||| |||||| 
Sbjct: 554 ccgactcccgcgtgtgcccgtcggtgacactgggactgcagcccggcgaggcattcaccg 613

                     
Query: 69  tccgcaacat 78
           ||||||||||
Sbjct: 614 tccgcaacat 623
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>gb|AY109272.1| Zea mays PCO064414 mRNA sequence
          Length = 978

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| || |||||||||||||| |||||||||||  ||||||| |||||||||||| 
Sbjct: 266 ccgactcccgcgtgtgcccgtcggtgaccctgggcctgcagcccggcgaggccttcaccg 325

                     
Query: 69  tccgcaacat 78
           | ||||||||
Sbjct: 326 tgcgcaacat 335
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>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds
          Length = 2184

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9    ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
            ||||||| ||||||| ||||||||| |||||||||||  ||||||| |||||||||||| 
Sbjct: 1484 ccgactcccgtgtgtccccgtcggtgaccctgggcctgcagcccggcgaggccttcaccg 1543

                      
Query: 69   tccgcaacat 78
            | ||||||||
Sbjct: 1544 ttcgcaacat 1553



 Score = 67.9 bits (34), Expect = 4e-09
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| ||||||||||||||||| |||||||||||  ||||||   ||||||||||| 
Sbjct: 881 ccgactcccgtgtgtgcccgtcggtgaccctgggcctgcagcccgcgaaggccttcaccg 940

                     
Query: 69  tccgcaacat 78
           | ||||||||
Sbjct: 941 ttcgcaacat 950



 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| || |||||||||||||| || ||||| ||  ||||||| ||||| |||||| 
Sbjct: 275 ccgactcccgcgtgtgcccgtcggtgacactgggactgcagcccggcgaggcattcaccg 334

                     
Query: 69  tccgcaacat 78
           ||||||||||
Sbjct: 335 tccgcaacat 344
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>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds
          Length = 1920

 Score = 75.8 bits (38), Expect = 1e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                        
Query: 9    ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
            ||||||| ||||||||||||||||| |||||||||||  |||| || |||||||||||| 
Sbjct: 1160 ccgactcccgtgtgtgcccgtcggtgaccctgggcctgcagccgggcgaggccttcaccg 1219

                      
Query: 69   tccgcaacat 78
            | ||||||||
Sbjct: 1220 ttcgcaacat 1229



 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| || |||||||||||||| || ||||| ||  ||||||| ||||| |||||| 
Sbjct: 554 ccgactcccgcgtgtgcccgtcggtgacactgggactgcagcccggcgaggcattcaccg 613

                     
Query: 69  tccgcaacat 78
           ||||||||||
Sbjct: 614 tccgcaacat 623
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>gb|AY504058.1| Sorghum bicolor clone 1233-246712 RFLP probe pSB1233
          Length = 312

 Score = 69.9 bits (35), Expect = 9e-10
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 20  gtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcaccatccgcaacat 78
           |||||||||||||| |||||||||||   |||||| |||||||||||| ||||||||||
Sbjct: 164 gtgtgcccgtcggtgaccctgggcctgatgcccggcgaggccttcaccgtccgcaacat 222
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>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds
          Length = 1208

 Score = 63.9 bits (32), Expect = 6e-08
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 23  tgcccgtcggtcaccctgggccttgagcccggtgaggccttcaccatccgcaacat 78
           ||||||||||| ||||| |||||  ||||||| |||||||||||| ||||||||||
Sbjct: 430 tgcccgtcggtgaccctcggcctgaagcccggcgaggccttcaccgtccgcaacat 485
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>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds
          Length = 1034

 Score = 63.9 bits (32), Expect = 6e-08
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 23  tgcccgtcggtcaccctgggccttgagcccggtgaggccttcaccatccgcaacat 78
           ||||||||||| ||||| |||||  ||||||| |||||||||||| ||||||||||
Sbjct: 269 tgcccgtcggtgaccctcggcctgaagcccggcgaggccttcaccgtccgcaacat 324
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>gb|AY107300.1| Zea mays PCO064410 mRNA sequence
          Length = 397

 Score = 60.0 bits (30), Expect = 9e-07
 Identities = 60/70 (85%)
 Strand = Plus / Plus

                                                                       
Query: 9   ccgactcgcgtgtgtgcccgtcggtcaccctgggccttgagcccggtgaggccttcacca 68
           ||||||| || |||||||||||||| |||||||||||  | ||||| ||||||||  || 
Sbjct: 226 ccgactcccgcgtgtgcccgtcggtgaccctgggcctgcaccccggcgaggcctttgccg 285

                     
Query: 69  tccgcaacat 78
           ||||||||||
Sbjct: 286 tccgcaacat 295
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 41       ggccttgagcccggtgagg 59
                |||||||||||||||||||
Sbjct: 20550750 ggccttgagcccggtgagg 20550732
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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete
             sequence
          Length = 101073

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    ggccttgagcccggtgagg 59
             |||||||||||||||||||
Sbjct: 64815 ggccttgagcccggtgagg 64797
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 41       ggccttgagcccggtgagg 59
                |||||||||||||||||||
Sbjct: 20543779 ggccttgagcccggtgagg 20543761
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 37      cctgggccttgagcccggt 55
               |||||||||||||||||||
Sbjct: 1267129 cctgggccttgagcccggt 1267111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 363,261
Number of Sequences: 3902068
Number of extensions: 363261
Number of successful extensions: 23363
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 23243
Number of HSP's gapped (non-prelim): 120
length of query: 78
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 57
effective length of database: 17,151,101,840
effective search space: 977612804880
effective search space used: 977612804880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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