| Clone Name | baal1p07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxidase (bpao2 gene) Length = 1700 Score = 1070 bits (540), Expect = 0.0 Identities = 575/585 (98%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 gggccccgggnagcagttcttcgtctacgccagctccaggnanagctactacgggnatgt 60 |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1103 gggccccgggaagcagttcttcgtctacgccagctccaggagaggctactacggg-atgt 1161 Query: 61 ggcagtcgttcgagnaaggagtaccccggggccaacgtgctgctggtgacggtgacggac 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 ggcagtcgttcgag-aaggagtaccccggggccaacgtgctgctggtgacggtgacggac 1220 Query: 121 gtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1221 gtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggc 1280 Query: 181 gtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1281 gtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgctg 1340 Query: 241 cgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 cgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaac 1400 Query: 301 cgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 cgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggag 1460 Query: 361 cacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggtatacactcc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 cacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggtatacactcc 1520 Query: 421 gcggacattctgatgaacaaggccctcaacaacgtcgactttaaagtccgtcccaagtat 480 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1521 gcggacattctgatgaacaaggcctccaacaacgtcgactttaaagtccgtcccaagtat 1580 Query: 481 gacgacgagctgaaagctgaggctaaatgaaggaggaagttgagatgccatgccagtctg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1581 gacgacgagctgaaagctgaggctaaatgaaggaggaagttgagatgccatgccagtctg 1640 Query: 541 ctcgcatgcatcgtcatggaataaactcagacgcgtgccacagtt 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1641 ctcgcatgcatcgtcatggaataaactcagacgcgtgccacagtt 1685
>emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin containing polyamine oxidase, exons 1-8 Length = 4217 Score = 571 bits (288), Expect = e-160 Identities = 317/325 (97%), Gaps = 2/325 (0%) Strand = Plus / Plus Query: 1 gggccccgggnagcagttcttcgtctacgccagctccaggnanagctactacgggnatgt 60 |||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 3368 gggccccgggaagcagttcttcgtctacgccagctccaggagaggctactacggg-atgt 3426 Query: 61 ggcagtcgttcgagnaaggagtaccccggggccaacgtgctgctggtgacggtgacggac 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3427 ggcagtcgttcgag-aaggagtaccccggggccaacgtgctgctggtgacggtgacggac 3485 Query: 121 gtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3486 gtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggc 3545 Query: 181 gtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3546 gtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgctg 3605 Query: 241 cgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3606 cgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaac 3665 Query: 301 cgctacgagtacgaccagctccggg 325 ||||||||||||||||||||||||| Sbjct: 3666 cgctacgagtacgaccagctccggg 3690 Score = 339 bits (171), Expect = 6e-90 Identities = 177/179 (98%) Strand = Plus / Plus Query: 324 ggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatgg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3816 ggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatgg 3875 Query: 384 ctatgtccacggagcttatcttgcaggtatacactccgcggacattctgatgaacaaggc 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3876 ctatgtccacggagcttatcttgcaggtatacactccgcggacattctgatgaacaaggc 3935 Query: 444 cctcaacaacgtcgactttaaagtccgtcccaagtatgacgacgagctgaaagctgagg 502 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3936 ctccaacaacgtcgactttaaagtccgtcccaagtatgacgacgagctgaaagctgagg 3994 Score = 170 bits (86), Expect = 3e-39 Identities = 86/86 (100%) Strand = Plus / Plus Query: 500 aggctaaatgaaggaggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgg 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 aggctaaatgaaggaggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgg 4176 Query: 560 aataaactcagacgcgtgccacagtt 585 |||||||||||||||||||||||||| Sbjct: 4177 aataaactcagacgcgtgccacagtt 4202
>emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxidase (bpao1 gene) Length = 1583 Score = 250 bits (126), Expect = 4e-63 Identities = 290/344 (84%), Gaps = 3/344 (0%) Strand = Plus / Plus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 |||||||| || ||||| || || || |||| |||||| ||||||||||||||||| | Sbjct: 1138 gccaacgttctcctggtcaccgtcaccgacgacgagtcgaggcggatcgagcagcagtcg 1197 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||||| ||||| ||||||| ||||| |||||| | | ||||||||||| | |||| Sbjct: 1198 gacaaccagaccaaggcggagatcgtggaggtgctgaggagcatgttccccggcgaggac 1257 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||| || || ||| |||||| || ||||||||| || | |||| || |||| Sbjct: 1258 gtccccgacgcgacggacatcctcgtgccacggtggtggtccgacaggttctacaggggc 1317 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccg 330 ||| ||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| Sbjct: 1318 accttctccaactggcccatcggcgtcaaccgctacgaatacgaccagctcagggcaccg 1377 Query: 331 gttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatggctatgtc 390 || |||| |||| ||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1378 gt---cgggagggtttacttcaccggggagcacaccagcgagcactacaacggttatgtc 1434 Query: 391 cacggagcttatcttgcaggtatacactccgcggacattctgat 434 || |||||||||||| ||||||| |||| || ||||||||||| Sbjct: 1435 catggagcttatctttcaggtattgactctgcagacattctgat 1478
>ref|XM_470573.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 202 bits (102), Expect = 9e-49 Identities = 260/312 (83%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 123 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 182 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 681 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 740 Query: 183 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 242 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 741 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 800 Query: 243 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 302 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 801 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 860 Query: 303 ctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagca 362 |||||| || ||||||||| |||| ||| || | | |||| ||||||||||| ||||| Sbjct: 861 ctacgaatatgaccagctcagggccccgatt---gagagggtttacttcaccggtgagca 917 Query: 363 caccagcgagcactacaatggctatgtccacggagcttatcttgcaggtatacactccgc 422 ||| |||||| ||||||||||||||||||| |||| ||||||||||||||| |||| || Sbjct: 918 cacaagcgagtactacaatggctatgtccatggaggttatcttgcaggtattgactctgc 977 Query: 423 ggacattctgat 434 ||| |||||||| Sbjct: 978 ggaaattctgat 989
>ref|XM_450669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1588 Score = 200 bits (101), Expect = 4e-48 Identities = 268/323 (82%), Gaps = 3/323 (0%) Strand = Plus / Plus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 1111 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 1170 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 1171 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 1230 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 1231 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 1290 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccg 330 || ||||||||||||||||||||||| |||||||| | ||||||||| |||||||| Sbjct: 1291 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctcagggcgccg 1350 Query: 331 gttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatggctatgtc 390 ||||| | | ||||| |||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 1351 gttgg---gagagtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtc 1407 Query: 391 cacggagcttatcttgcaggtat 413 || |||||||||||||||||||| Sbjct: 1408 catggagcttatcttgcaggtat 1430
>dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L10, full insert sequence Length = 1587 Score = 200 bits (101), Expect = 4e-48 Identities = 268/323 (82%), Gaps = 3/323 (0%) Strand = Plus / Plus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 1110 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 1169 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 1170 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 1229 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 1230 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 1289 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccg 330 || ||||||||||||||||||||||| |||||||| | ||||||||| |||||||| Sbjct: 1290 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctcagggcgccg 1349 Query: 331 gttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatggctatgtc 390 ||||| | | ||||| |||||||| |||||||| ||||||| |||||||||||||||| Sbjct: 1350 gttgg---gagagtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtc 1406 Query: 391 cacggagcttatcttgcaggtat 413 || |||||||||||||||||||| Sbjct: 1407 catggagcttatcttgcaggtat 1429
>emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing polyamine oxidase (PAO) Length = 1750 Score = 190 bits (96), Expect = 4e-45 Identities = 306/374 (81%), Gaps = 4/374 (1%) Strand = Plus / Plus Query: 58 tgtggcagtcgttcgagnaaggagtaccccggggccaacgtgctgctggtgacggtgacg 117 |||||||| ||||||| ||| ||||||| | ||||| || || ||||| || ||||| Sbjct: 1145 tgtggcaggagttcgag-aagcagtaccctgacgccaatgtcctcctggtcaccgtgacc 1203 Query: 118 gacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtg 177 |||| ||||||| |||| |||||||||||| | ||| | ||||| ||||||| | || Sbjct: 1204 gacgaggagtcgaggcgcatcgagcagcagtcggacgagcagaccaaggcggagatcatg 1263 Query: 178 ggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtg 237 |||||||| || |||||||||| | ||||||||| ||||||||||| ||| || Sbjct: 1264 caggtgctgcggaagatgttccccggcaaggacgtcccggacgccaccgacatccttgtc 1323 Query: 238 ccgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtc 297 ||| | ||||||||| || | |||| ||||||| ||| |||||||||||| | |||||| Sbjct: 1324 ccgaggtggtggtccgacaggttctacaagggcaccttctccaactggccagttggcgtc 1383 Query: 298 aaccgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggg 357 ||||||||||| ||||||||||| |||| |||||||| | |||| ||||||||||| Sbjct: 1384 aaccgctacgaatacgaccagcttagggcaccggttgg---gagggtatacttcaccggc 1440 Query: 358 gagcacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggtatacac 417 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| || Sbjct: 1441 gagcacaccagcgagcactacaatggctatgtccatggagcctatctttcaggtatcgac 1500 Query: 418 tccgcggacattct 431 ||||| || ||||| Sbjct: 1501 tccgctgaaattct 1514
>gb|AY107888.1| Zea mays PCO061908 mRNA sequence Length = 1895 Score = 190 bits (96), Expect = 4e-45 Identities = 306/374 (81%), Gaps = 4/374 (1%) Strand = Plus / Plus Query: 58 tgtggcagtcgttcgagnaaggagtaccccggggccaacgtgctgctggtgacggtgacg 117 |||||||| ||||||| ||| ||||||| | ||||| || || ||||| || ||||| Sbjct: 1151 tgtggcaggagttcgag-aagcagtaccctgacgccaatgtcctcctggtcaccgtgacc 1209 Query: 118 gacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtg 177 |||| ||||||| |||| |||||||||||| | ||| | ||||| ||||||| | || Sbjct: 1210 gacgaggagtcgaggcgcatcgagcagcagtcggacgagcagaccaaggcggagatcatg 1269 Query: 178 ggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtg 237 |||||||| || |||||||||| | ||||||||| ||||||||||| ||| || Sbjct: 1270 caggtgctgcggaagatgttccccggcaaggacgtcccggacgccaccgacatccttgtc 1329 Query: 238 ccgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtc 297 ||| | ||||||||| || | |||| ||||||| ||| |||||||||||| | |||||| Sbjct: 1330 ccgaggtggtggtccgacaggttctacaagggcaccttctccaactggccagttggcgtc 1389 Query: 298 aaccgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggg 357 ||||||||||| ||||||||||| |||| |||||||| | |||| ||||||||||| Sbjct: 1390 aaccgctacgaatacgaccagcttagggcaccggttgg---gagggtatacttcaccggc 1446 Query: 358 gagcacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggtatacac 417 ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| || Sbjct: 1447 gagcacaccagcgagcactacaatggctatgtccatggagcctatctttcaggtatcgac 1506 Query: 418 tccgcggacattct 431 ||||| || ||||| Sbjct: 1507 tccgctgaaattct 1520
>ref|XM_450667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1473 Score = 184 bits (93), Expect = 2e-43 Identities = 206/243 (84%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 192 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 251 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 1179 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 1238 Query: 252 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 311 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 1239 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 1298 Query: 312 cgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcga 371 ||||||||| ||||||||||||| | | || ||||||||||| |||||||| ||||| Sbjct: 1299 tgaccagctcagggcgccggttgg---gagagtgtacttcaccggtgagcacacgagcga 1355 Query: 372 gcactacaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattct 431 || |||||||||||||||||| |||||||||||||||||||| |||| || || ||||| Sbjct: 1356 gcgctacaatggctatgtccatggagcttatcttgcaggtattgactctgcagagattct 1415 Query: 432 gat 434 ||| Sbjct: 1416 gat 1418 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 1078 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 1137 Query: 151 gaca 154 |||| Sbjct: 1138 gaca 1141
>emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing polyamine oxidase, exons 1-8 Length = 4096 Score = 180 bits (91), Expect = 3e-42 Identities = 255/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 103 ctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgacc 162 ||||| || ||||| |||| ||||||| |||| |||||||||||| | ||| | |||| Sbjct: 3595 ctggtcaccgtgaccgacgaggagtcgaggcgcatcgagcagcagtcggacgagcagacc 3654 Query: 163 atggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgcc 222 | ||||||| | || |||||||| || |||||||||| | ||||||||| |||||| Sbjct: 3655 aaggcggagatcatgcaggtgctgcggaagatgttccccggcaaggacgtcccggacgcc 3714 Query: 223 accgatatctacgtgccgcgctggtggtccaaccgattcttcaagggctcctactccaac 282 ||||| ||| || ||| | ||||||||| || | |||| ||||||| ||| ||||||| Sbjct: 3715 accgacatccttgtcccgaggtggtggtccgacaggttctacaagggcaccttctccaac 3774 Query: 283 tggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccggttggcgggcgg 342 ||||| | ||||||||||||||||| ||||||||||| |||| |||||||| | || Sbjct: 3775 tggccagttggcgtcaaccgctacgaatacgaccagcttagggcaccggttgg---gagg 3831 Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3832 gtatacttcaccggcgagcacaccagcgagcactacaatggctatgtccatggagcctat 3891 Query: 403 cttgcaggt 411 ||| ||||| Sbjct: 3892 ctttcaggt 3900
>emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO2 Length = 4344 Score = 180 bits (91), Expect = 3e-42 Identities = 255/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 103 ctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgacc 162 ||||| || ||||| |||| ||||||| |||| |||||||||||| | ||| | |||| Sbjct: 3842 ctggtcaccgtgaccgacgaggagtcgaggcgcatcgagcagcagtcggacgagcagacc 3901 Query: 163 atggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgcc 222 | ||||||| | || |||||||| || |||||||||| | ||||||||| |||||| Sbjct: 3902 aaggcggagatcatgcaggtgctgcggaagatgttccccggcaaggacgtcccggacgcc 3961 Query: 223 accgatatctacgtgccgcgctggtggtccaaccgattcttcaagggctcctactccaac 282 ||||| ||| || ||| | ||||||||| || | |||| ||||||| ||| ||||||| Sbjct: 3962 accgacatccttgtcccgagatggtggtccgacaggttctacaagggcaccttctccaac 4021 Query: 283 tggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccggttggcgggcgg 342 ||||| | ||||||||||||||||| ||||||||||| |||| |||||||| | || Sbjct: 4022 tggccagttggcgtcaaccgctacgaatacgaccagcttagggcaccggttgg---gagg 4078 Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 4079 gtatacttcaccggtgagcacaccagcgagcactacaatggctatgtccatggagcctat 4138 Query: 403 cttgcaggt 411 ||| ||||| Sbjct: 4139 ctttcaggt 4147
>emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO3 Length = 3384 Score = 172 bits (87), Expect = 8e-40 Identities = 254/309 (82%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 103 ctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgacc 162 ||||| || ||||| |||| ||||||| |||| |||||||||||| | ||| | |||| Sbjct: 2883 ctggtcaccgtgaccgacgaggagtcgaggcgcatcgagcagcagtcggacgagcagacc 2942 Query: 163 atggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgcc 222 | ||||||| | || |||||||| || |||||||||| | ||||||||| |||||| Sbjct: 2943 aaggcggagatcatgcaggtgctgcggaagatgttccccggcaaggacgtcccagacgcc 3002 Query: 223 accgatatctacgtgccgcgctggtggtccaaccgattcttcaagggctcctactccaac 282 ||||| ||| || ||| | ||||||||| || | |||| ||||||| ||| ||| ||| Sbjct: 3003 accgacatccttgtcccgaggtggtggtccgacaggttctacaagggcaccttctctaac 3062 Query: 283 tggcccatcggcgtcaaccgctacgagtacgaccagctccgggcgccggttggcgggcgg 342 ||||| | ||||||||||||||||| ||||||||||| |||| |||||||| | || Sbjct: 3063 tggccagttggcgtcaaccgctacgaatacgaccagcttagggcaccggttgg---gagg 3119 Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 3120 gtatacttcaccggtgagcacaccagcgagcactacaatggctatgtccatggagcctat 3179 Query: 403 cttgcaggt 411 ||| ||||| Sbjct: 3180 ctttcaggt 3188
>emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin containing polyamine oxidase, exons 1-9 Length = 2942 Score = 141 bits (71), Expect = 3e-30 Identities = 191/231 (82%) Strand = Plus / Plus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 |||||||| || ||||| || || || |||| |||||| ||||||||||||||||| | Sbjct: 2260 gccaacgttctcctggtcaccgtcaccgacgacgagtcgaggcggatcgagcagcagtcg 2319 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||||| ||||| ||||||| ||||| |||||| | | ||||||||||| | |||| Sbjct: 2320 gacaaccagaccaaggcggagatcgtggaggtgctgaggagcatgttccccggcgaggac 2379 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||| || || ||| ||||| || ||||||||| || | |||| || |||| Sbjct: 2380 gtccccgacgcgacggacatcctagtgccacggtggtggtccgacaggttctacaggggc 2439 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 321 ||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2440 accttctccaactggcccatcggcgtcaaccgctacgaatacgaccagctc 2490 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 336 cgggcgggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacgg 395 |||| |||| ||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 2634 cgggagggtttacttcaccggggagcacaccagcgagcactacaacggttatgtccatgg 2693 Query: 396 agcttatcttgcaggtat 413 |||||||||| ||||||| Sbjct: 2694 agcttatctttcaggtat 2711
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 123 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 182 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 4847852 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 4847911 Query: 183 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 242 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 4847912 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 4847971 Query: 243 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 302 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 4847972 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 4848031 Query: 303 ctacgagtacgaccagctc 321 |||||| || ||||||||| Sbjct: 4848032 ctacgaatatgaccagctc 4848050 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 341 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 400 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 4848193 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 4848252 Query: 401 atcttgcaggtataca 416 |||||||||||||||| Sbjct: 4848253 atcttgcaggtataca 4848268
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 123 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 182 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 147695 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 147636 Query: 183 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 242 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 147635 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 147576 Query: 243 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 302 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 147575 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 147516 Query: 303 ctacgagtacgaccagctc 321 |||||| || ||||||||| Sbjct: 147515 ctacgaatatgaccagctc 147497 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 341 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 400 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 147354 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 147295 Query: 401 atcttgcaggtataca 416 |||||||||||||||| Sbjct: 147294 atcttgcaggtataca 147279
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 123 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 182 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 4847067 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 4847126 Query: 183 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 242 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 4847127 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 4847186 Query: 243 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 302 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 4847187 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 4847246 Query: 303 ctacgagtacgaccagctc 321 |||||| || ||||||||| Sbjct: 4847247 ctacgaatatgaccagctc 4847265 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 341 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 400 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 4847408 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 4847467 Query: 401 atcttgcaggtataca 416 |||||||||||||||| Sbjct: 4847468 atcttgcaggtataca 4847483
>emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMWG0647 Length = 252 Score = 113 bits (57), Expect = 7e-22 Identities = 65/67 (97%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 515 ggaagttgagatgccatgccagtctgctcgcatgcatcgtcat-ggaataaactcagacg 573 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 3 ggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgggaataaactcagabg 62 Query: 574 cgtgcca 580 ||||||| Sbjct: 63 cgtgcca 69
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 12113606 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 12113547 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 12113546 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 12113487 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 12113486 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 12113427 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 321 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 12113426 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 12113376 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 346 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 405 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 12092851 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 12092792 Query: 406 gcaggtat 413 |||||||| Sbjct: 12092791 gcaggtat 12092784 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 12113204 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 12113145 Query: 403 cttgcaggtat 413 ||||||||||| Sbjct: 12113144 cttgcaggtat 12113134 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 192 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 251 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 12093111 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 12093052 Query: 252 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 311 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 12093051 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 12092992 Query: 312 cgaccagctc 321 ||||||||| Sbjct: 12092991 tgaccagctc 12092982 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 12093212 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 12093153 Query: 151 gaca 154 |||| Sbjct: 12093152 gaca 12093149
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 25065 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 25006 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 25005 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 24946 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 24945 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 24886 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 321 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 24885 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 24835 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 346 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 405 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 4310 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 4251 Query: 406 gcaggtat 413 |||||||| Sbjct: 4250 gcaggtat 4243 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 24663 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 24604 Query: 403 cttgcaggtat 413 ||||||||||| Sbjct: 24603 cttgcaggtat 24593 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 192 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 251 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 4570 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 4511 Query: 252 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 311 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 4510 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 4451 Query: 312 cgaccagctc 321 ||||||||| Sbjct: 4450 tgaccagctc 4441 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 4671 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 4612 Query: 151 gaca 154 |||| Sbjct: 4611 gaca 4608
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 47985 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 47926 Query: 151 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 210 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 47925 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 47866 Query: 211 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 270 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 47865 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 47806 Query: 271 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 321 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 47805 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 47755 Score = 103 bits (52), Expect = 6e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 346 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 405 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 27230 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 27171 Query: 406 gcaggtat 413 |||||||| Sbjct: 27170 gcaggtat 27163 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 343 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 402 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 47583 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 47524 Query: 403 cttgcaggtat 413 ||||||||||| Sbjct: 47523 cttgcaggtat 47513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 192 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 251 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 27490 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 27431 Query: 252 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 311 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 27430 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 27371 Query: 312 cgaccagctc 321 ||||||||| Sbjct: 27370 tgaccagctc 27361 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 91 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 150 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 27591 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 27532 Query: 151 gaca 154 |||| Sbjct: 27531 gaca 27528
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete sequence Length = 106110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 349 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 392 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 41503 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 41460
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 349 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 392 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 11026733 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 11026776
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 349 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 392 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 11033173 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 11033216
>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete sequence Length = 177843 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 267 gggctcctactccaactggcc 287 ||||||||||||||||||||| Sbjct: 67356 gggctcctactccaactggcc 67336
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cgccggttggcgggcgggtc 345 |||||||||||||||||||| Sbjct: 41751 cgccggttggcgggcgggtc 41732
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cgccggttggcgggcgggtc 345 |||||||||||||||||||| Sbjct: 27677193 cgccggttggcgggcgggtc 27677174 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,927,998 Number of Sequences: 3902068 Number of extensions: 2927998 Number of successful extensions: 55108 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54858 Number of HSP's gapped (non-prelim): 219 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)