| Clone Name | baal2e13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT018131.1| Zea mays clone EL01N0554D08.c mRNA sequence Length = 1060 Score = 95.6 bits (48), Expect = 1e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 81 gacctcgcctgctaccacaacctcgaggcgcacctccaccttctcgacggctaccagggg 140 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| || || Sbjct: 473 gacctctcgtgctaccacaacctggaggcgcacctgcacctgctggacggcttccgcggc 532 Query: 141 cgcggcaaggagttcaagctcggtggcagggacccggcgctcgtcaacaaggcggccgac 200 |||| || |||| ||| | | || |||||||| ||||| || |||||| | ||||| Sbjct: 533 tccggcgcggggttcgagccccgcgggagggaccccgcgctggtgaacaagtccaccgac 592 Query: 201 ttcctcgtggacgagcacatggtgccgcccgtgtggcgccaggagttcaacaagggcctg 260 |||||| ||| || ||||||||||||||||||||| ||||| | ||||||||| || Sbjct: 593 ttcctccgggaggaccacatggtgccgcccgtgtggtaccaggcggagaacaagggcatg 652 Query: 261 gtcaggacggaggacgggcggtgg 284 || |||||||||||||| |||||| Sbjct: 653 gtgaggacggaggacggccggtgg 676
>ref|XM_475184.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 25 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 84 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 1328 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 1387 Query: 85 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 130 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1388 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 1433
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 25 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 84 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 47668 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 47609 Query: 85 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 130 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 47608 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 47563 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 171 gacccggcgctcgtcaacaaggcggccgacttcctc 206 ||||||||||| || ||||||||| |||||||||| Sbjct: 42245 gacccggcgctggtgaacaaggcgtgcgacttcctc 42210
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 25 tcggcgtggagctggcgctcaaccacaggctctcccctttcctcaagaacgtcttcgacc 84 ||||||||||||| |||||| |||||| || || || ||||||||| || |||||| Sbjct: 18742265 tcggcgtggagctcgcgctcgaccacaagcggtcgccgttcctcaaggacacgctcgacc 18742206 Query: 85 tcgcctgctaccacaacctcgaggcgcacctccaccttctcgacgg 130 ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 18742205 cggcctgcttccacaacctcgaggcgcacctccacctcctcgacgg 18742160 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 5576489 cgccaccgctgccgccaccgcc 5576510 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgccaa 403 |||||||||||||||| ||||||| Sbjct: 25472371 cgccaccgctgccgccgccgccaa 25472394 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 171 gacccggcgctcgtcaacaaggcggccgacttcctc 206 ||||||||||| || ||||||||| |||||||||| Sbjct: 18736842 gacccggcgctggtgaacaaggcgtgcgacttcctc 18736807
>gb|AY112551.1| Zea mays CL8419_1 mRNA sequence Length = 655 Score = 73.8 bits (37), Expect = 5e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 196 ccgacttcctcgtggacgagcacatggtgccgcccgtgtggcgccaggagttcaacaagg 255 ||||||||||| ||| || ||||||||||||||||||||| ||||| | ||||||| Sbjct: 457 ccgacttcctccgggaggaccacatggtgccgcccgtgtggtaccaggcggagaacaagg 398 Query: 256 gcctggtcaggacggaggacgggcggtgg 284 || |||| |||||||||||||| |||||| Sbjct: 397 gcatggtgaggacggaggacggccggtgg 369 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 81 gacctcgcctgctaccacaacctcgaggcgcacctccaccttctcgacggct 132 |||||| | |||||||||||||| ||||||||||| ||||| || ||||||| Sbjct: 572 gacctctcgtgctaccacaacctggaggcgcacctgcacctgctggacggct 521
>gb|AF192748.1| Lampetra fluviatilis synapsin Ib (SYN I) mRNA, complete cds Length = 2098 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 361 ccgcagccgttaccgccaacgccaccgctgccgccaccgcca 402 |||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 208 ccgccgccgctaccgccaccgccgccgctgccgccaccgcca 167
>gb|AF192747.1| Lampetra fluviatilis synapsin Ia (SYN I) mRNA, complete cds Length = 2108 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 361 ccgcagccgttaccgccaacgccaccgctgccgccaccgcca 402 |||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 208 ccgccgccgctaccgccaccgccgccgctgccgccaccgcca 167
>ref|NM_195854.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0050M22.10), mRNA Length = 384 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 216 ccgccaacgccaccgccgccgccaccgcc 188
>gb|AC090483.3|AC090483 Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0050M22, from chromosome 10, complete sequence Length = 145417 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 141244 ccgccaacgccaccgccgccgccaccgcc 141216
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 9507760 ccgccaacgccaccgccgccgccaccgcc 9507732 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 ccaacgccaccgctgccgccaccgccaac 404 |||||||| |||| ||||||||||||||| Sbjct: 2974422 ccaacgccgccgccgccgccaccgccaac 2974450 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 acaagggcctggtcaggacggaggacgggcggtggc 285 |||||||| ||| ||||||| |||||||||||||| Sbjct: 13347700 acaagggcgtggcgaggacggcggacgggcggtggc 13347735
>dbj|AK070380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052O04, full insert sequence Length = 815 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 512 ccgccaacgccaccgccgccgccaccgcc 484
>dbj|AK066322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062A07, full insert sequence Length = 744 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 479 ccgccaacgccaccgccgccgccaccgcc 451
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||||||| |||||||||||| Sbjct: 9513799 ccgccaacgccaccgccgccgccaccgcc 9513771 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 ccaacgccaccgctgccgccaccgccaac 404 |||||||| |||| ||||||||||||||| Sbjct: 2974343 ccaacgccgccgccgccgccaccgccaac 2974371 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 acaagggcctggtcaggacggaggacgggcggtggc 285 |||||||| ||| ||||||| |||||||||||||| Sbjct: 13355040 acaagggcgtggcgaggacggcggacgggcggtggc 13355075
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccgcc 401 ||||| |||||| |||||||||||||||||| |||| Sbjct: 3157662 gccgtcaccgccgacgccaccgctgccgccagcgcc 3157627 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccg 399 |||||| |||||| |||| ||||||||||||||| Sbjct: 3933618 gccgttcccgccagcgccgccgctgccgccaccg 3933585
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccgcc 401 ||||| |||||| |||||||||||||||||| |||| Sbjct: 302468 gccgtcaccgccgacgccaccgctgccgccagcgcc 302433
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccgcc 401 ||||| |||||| |||||||||||||||||| |||| Sbjct: 44415 gccgtcaccgccgacgccaccgctgccgccagcgcc 44380
>gb|BC068895.1| Xenopus laevis hypothetical protein MGC83087, mRNA (cDNA clone MGC:83087 IMAGE:6317023), complete cds Length = 2178 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 342 ctcgctgagctcggagttgccgcagcc 368 ||||||||||||||||||||| ||||| Sbjct: 233 ctcgctgagctcggagttgccacagcc 207
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgccgccaccgcca 402 ||||||| ||||||||| ||||||||||||| Sbjct: 11682716 accgccaccgccaccgccgccgccaccgcca 11682746
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgccgccaccgcca 402 ||||||| ||||||||| ||||||||||||| Sbjct: 71811 accgccaccgccaccgccgccgccaccgcca 71841
>gb|AC010235.7| Homo sapiens chromosome 5 clone CTC-339D2, complete sequence Length = 228600 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcca 402 ||||||||||||||||||||||| Sbjct: 213632 cgccaccgctgccgccaccgcca 213654
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgccgccaccgcca 402 ||||||| ||||||||| ||||||||||||| Sbjct: 11679479 accgccaccgccaccgccgccgccaccgcca 11679509
>gb|AC008546.6|AC008546 Homo sapiens chromosome 5 clone CTC-501K1, complete sequence Length = 205954 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcca 402 ||||||||||||||||||||||| Sbjct: 122798 cgccaccgctgccgccaccgcca 122820
>gb|AC124243.3| Homo sapiens chromosome 8, clone CTD-3077F2, complete sequence Length = 188240 Score = 46.1 bits (23), Expect = 0.11 Identities = 38/43 (88%) Strand = Plus / Plus Query: 359 tgccgcagccgttaccgccaacgccaccgctgccgccaccgcc 401 |||||| |||| |||||||| ||||||||| ||||||||||| Sbjct: 184606 tgccgccgccgctaccgccaccgccaccgccaccgccaccgcc 184648
>ref|NM_192394.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 942 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 accgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||||||||||||||||| Sbjct: 171 accgccactgccaccgctgccgccaccgcc 142
>gb|AY023070.1| Oryza sativa microsatellite MRG5395 containing (GAC)X10, genomic sequence Length = 230 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgccaacg 405 |||||||||||||||| ||||||||| Sbjct: 64 cgccaccgctgccgccgccgccaacg 39
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 109698 cgccaccgctgccgccaccgcc 109719
>gb|AC130730.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0681D04, complete sequence Length = 163670 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 453 cgccaccgctgccgccaccgcc 474
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 1510166 cgccaccgctgccgccaccgcc 1510187
>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part of a novel gene, complete sequence Length = 119790 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 458 attaattgcaagtatatatata 479 |||||||||||||||||||||| Sbjct: 56740 attaattgcaagtatatatata 56719
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccg 399 |||||| |||||| |||| ||||||||||||||| Sbjct: 123196 gccgttcccgccagcgccgccgctgccgccaccg 123163
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 366 gccgttaccgccaacgccaccgctgccgccaccg 399 |||||| |||||| |||| ||||||||||||||| Sbjct: 133609 gccgttcccgccagcgccgccgctgccgccaccg 133576
>gb|AC151612.2| Emiliania huxleyi clone JGIACCU-13I1, complete sequence Length = 35427 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 18251 cgccaccgctgccgccaccgcc 18272
>gb|BC114097.1| Bos taurus cDNA clone IMAGE:8167074, partial cds Length = 2474 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcca 402 |||||| |||||||||| |||||||||||| Sbjct: 205 ccgccaccgccaccgctaccgccaccgcca 176
>dbj|AK075169.1| Homo sapiens cDNA FLJ90688 fis, clone PLACE1006208, highly similar to Homo sapiens nGAP mRNA Length = 1914 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Plus Query: 360 gccgcagccgttaccgccaacgccaccgctgccgccaccgcc 401 ||||| |||| |||||||| ||||||||| ||||||||||| Sbjct: 55 gccgccgccgctaccgccaccgccaccgccaccgccaccgcc 96
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 74408 cgccaccgctgccgccaccgcc 74429
>gb|AE009867.1|AE009867 Pyrobaculum aerophilum strain IM2 section 122 of 201 of the complete genome Length = 6790 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 3279 cgccaccgctgccgccaccgcc 3300
>gb|AF232004.3| Pseudomonas syringae pv. tomato strain DC3000 Hrp pathogenicity island, complete sequence Length = 52498 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 43797 cgccaccgctgccgccaccgcc 43776
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcca 402 |||||| ||||||||| ||||||||||||| Sbjct: 6208326 ccgccaccgccaccgccgccgccaccgcca 6208297
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgccaacg 405 |||||||||||||||| ||||||||| Sbjct: 25612873 cgccaccgctgccgccgccgccaacg 25612848 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acgccaccgctgccgccaccgcca 402 ||||||||||||||||| |||||| Sbjct: 30242095 acgccaccgctgccgccgccgcca 30242118 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acgccaccgctgccgccaccgcca 402 ||||||||||||||||| |||||| Sbjct: 30108138 acgccaccgctgccgccgccgcca 30108161
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 accgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||||||||||||||||| Sbjct: 26382802 accgccactgccaccgctgccgccaccgcc 26382773 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 22178264 ccaccgctgccgccaccgcc 22178283
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 372 accgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||||||||||||||||| Sbjct: 56667 accgccactgccaccgctgccgccaccgcc 56638
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgccaacg 405 |||||||||||||||| ||||||||| Sbjct: 131190 cgccaccgctgccgccgccgccaacg 131165
>dbj|AP003571.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0458E02 Length = 154458 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgccaacg 405 |||||||||||||||| ||||||||| Sbjct: 36318 cgccaccgctgccgccgccgccaacg 36293
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcca 402 |||||| ||||||||| ||||||||||||| Sbjct: 71719 ccgccaccgccaccgccgccgccaccgcca 71690
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 472079 cgccaccgctgccgccaccgcc 472058 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccg 399 |||||||||||||||||||| Sbjct: 615254 cgccaccgctgccgccaccg 615273
>gb|AF005221.1|AF005221 Pseudomonas syringae hrp-secreted protein HrpW (hrpW) gene, complete cds Length = 1729 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccgcc 401 |||||||||||||||||||||| Sbjct: 917 cgccaccgctgccgccaccgcc 896
>gb|AY785361.1| Anopheles gambiae male-specific transcription factor FRU-MA (fru) mRNA, complete cds Length = 2974 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 gccaccgctgccgccaccgcc 401 ||||||||||||||||||||| Sbjct: 2624 gccaccgctgccgccaccgcc 2604
>ref|NM_194862.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0031A07.10), mRNA Length = 345 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 ccaacgccaccgctgccgccaccgccaac 404 |||||||| |||| ||||||||||||||| Sbjct: 44 ccaacgccgccgccgccgccaccgccaac 72
>ref|XM_360329.1| Magnaporthe grisea 70-15 hypothetical protein (MG05703.4) partial mRNA Length = 2268 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcca 402 ||||||||||||||||||||| Sbjct: 1229 ccaccgctgccgccaccgcca 1209
>gb|AC134923.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0030I07, complete sequence Length = 122733 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||| ||||||||||| |||| Sbjct: 44789 ccgccaacgccagcgctgccgccatcgcc 44761
>ref|XM_543959.2| PREDICTED: Canis familiaris similar to Lysyl oxidase homolog 4 precursor (Lysyl oxidase-like protein 4) (Lysyl oxidase related protein C) (LOC486830), mRNA Length = 2467 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccaccgcca 402 ||||| ||||||||| ||||||||||||| Sbjct: 17 cgccaccgccaccgccgccgccaccgcca 45
>ref|XM_801666.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053506039.30) partial mRNA Length = 5569 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||| ||||||||| |||||||||||| Sbjct: 16 ccgccaccgccaccgccgccgccaccgcc 44
>gb|AY597281.1| Pseudomonas viridiflava strain ME3.1b pathogenicity island PAI-Region-2, partial sequence Length = 39776 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgccgccaccgccaac 404 ||||||| ||||||||| |||||||||||||| Sbjct: 26449 accgccaccgccaccgccaccgccaccgccaac 26481
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tcgtcaacaaggcggccgact 201 ||||||||||||||||||||| Sbjct: 2896363 tcgtcaacaaggcggccgact 2896343
>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0023F01, complete sequence Length = 145009 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||| ||||||||||| |||| Sbjct: 7189 ccgccaacgccagcgctgccgccatcgcc 7217
>gb|AC104325.28| Mus musculus strain C57BL/6J clone rp23-204m3 map 15, complete sequence Length = 224086 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 gctctcccctttcctcaagaa 73 ||||||||||||||||||||| Sbjct: 145643 gctctcccctttcctcaagaa 145623
>emb|AL646096.8| Mouse DNA sequence from clone RP23-176J13 on chromosome 11 Contains the 5' end of the Scpep1 gene for serine carboxypeptidase 1, two transcription elongation factor B (SIII) polypeptide 2 (Tceb2) pseudogenes, four novel genes (incl. A930013B10Rik), the Coil gene for coilin, the Trim25 gene for tripartite motif protein 25 and the Dgke gene for diacylglycerol kinase epsilon, complete sequence Length = 171512 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccacc 398 ||||| ||||||||||||||||||| Sbjct: 6399 cgccaccgccaccgctgccgccacc 6423
>gb|AE011986.1| Xanthomonas axonopodis pv. citri str. 306, section 364 of 469 of the complete genome Length = 10486 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 331 ccgatctgcacctcgctgagc 351 ||||||||||||||||||||| Sbjct: 8047 ccgatctgcacctcgctgagc 8027
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 ccaacgccaccgctgccgccaccgccaac 404 |||||||| |||| ||||||||||||||| Sbjct: 62844 ccaacgccgccgccgccgccaccgccaac 62872
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||| ||||||||||| |||| Sbjct: 26582531 ccgccaacgccagcgctgccgccatcgcc 26582503
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcca 402 ||||||||||||||||||||| Sbjct: 19955682 ccaccgctgccgccaccgcca 19955702
>gb|AC012373.14|AC012373 Drosophila melanogaster, chromosome X, region 17B-17C, BAC clone BACR17H16, complete sequence Length = 182080 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 taccgccaacgccaccgctgccgcc 395 |||||||||||||||||| |||||| Sbjct: 5021 taccgccaacgccaccgccgccgcc 5045
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 taccgccaacgccaccgctgccgcc 395 |||||||||||||||||| |||||| Sbjct: 145433 taccgccaacgccaccgccgccgcc 145457
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcca 402 ||||||||||||||||||||| Sbjct: 133283 ccaccgctgccgccaccgcca 133303
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcca 402 ||||||||||||||||||||| Sbjct: 59803 ccaccgctgccgccaccgcca 59823
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 371 taccgccaacgccaccgctgccgcc 395 |||||||||||||||||| |||||| Sbjct: 69445 taccgccaacgccaccgccgccgcc 69469
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 373 ccgccaacgccaccgctgccgccaccgcc 401 |||||||||||| ||||||||||| |||| Sbjct: 26907795 ccgccaacgccagcgctgccgccatcgcc 26907767
>dbj|D83970.1| Vigna unguiculata mRNA for CPRD8 protein, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgccgccaccgc 400 ||||||| ||||||||| ||||||||||| Sbjct: 22 accgccaccgccaccgccgccgccaccgc 50
>gb|AY398392.1| Danio rerio clone RK135A1E12 hypothetical protein p5326 (P5326) mRNA, complete cds Length = 1914 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 400 gagctggcgctcaaccacag 419
>ref|XM_528736.1| PREDICTED: Pan troglodytes similar to IQSEC3 protein (LOC473365), mRNA Length = 1017 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 caccgctgccgccaccgcca 402 |||||||||||||||||||| Sbjct: 723 caccgctgccgccaccgcca 742
>ref|NM_196418.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0060A14.8), mRNA Length = 684 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 acaagggcctggtcaggacggaggacgggcggtggc 285 |||||||| ||| ||||||| |||||||||||||| Sbjct: 53 acaagggcgtggcgaggacggcggacgggcggtggc 88
>ref|NM_193620.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 429 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 342 ccaccgctgccgccaccgcc 323
>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence Length = 172618 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 accgccaacgccaccgctgccgccaccgccaa 403 ||||||| ||||||||| ||||||||||||| Sbjct: 136422 accgccaccgccaccgccaccgccaccgccaa 136391
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 accgccaacgccaccgctgc 391 |||||||||||||||||||| Sbjct: 198558 accgccaacgccaccgctgc 198577
>gb|AF442698.1| Salix burjatica clone SB88 microsatellite sequence Length = 272 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 371 taccgccaacgccaccgctgccgccaccgcca 402 |||||||| ||||||||| |||||||||||| Sbjct: 109 taccgccaccgccaccgccaccgccaccgcca 140
>gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome 12, complete sequence Length = 136354 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccg 399 |||||||||||||||||||| Sbjct: 93621 cgccaccgctgccgccaccg 93602
>gb|AC164557.3| Mus musculus BAC clone RP23-282G1 from chromosome 8, complete sequence Length = 175078 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccaacgccaccgctgccgccacc 398 ||||||||||||||||| |||||| Sbjct: 89504 gccaacgccaccgctgctgccacc 89481
>ref|XM_368522.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00722.4) partial mRNA Length = 2967 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 gccaacgccaccgctgccgccaccgccaacgt 406 |||||||||| || ||||||||||||||||| Sbjct: 1318 gccaacgccatcggcgccgccaccgccaacgt 1349
>gb|BC055119.1| Danio rerio zgc:63470, mRNA (cDNA clone MGC:63470 IMAGE:2600290), complete cds Length = 1894 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 405 gagctggcgctcaaccacag 424
>gb|BC067593.1| Danio rerio zgc:63470, mRNA (cDNA clone MGC:85731 IMAGE:6970356), complete cds Length = 1980 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 408 gagctggcgctcaaccacag 427
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 380 cgccaccgctgccgccaccgccaa 403 |||||||||||||||| ||||||| Sbjct: 112732 cgccaccgctgccgccgccgccaa 112755
>gb|AC141437.4| Mus musculus BAC clone RP23-283O7 from chromosome 19, complete sequence Length = 134644 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gccaccgctgccgccaccgc 400 |||||||||||||||||||| Sbjct: 13466 gccaccgctgccgccaccgc 13485
>ref|XM_808574.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508283.10) partial mRNA Length = 10365 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||| ||||||||||||||||| Sbjct: 4852 ccgccaccgccaccgctgccgcca 4875
>ref|XM_809227.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506287.80) partial mRNA Length = 4743 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gttaccgccaacgccaccgc 388 |||||||||||||||||||| Sbjct: 4419 gttaccgccaacgccaccgc 4438
>ref|XM_797506.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053410049.10) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gttaccgccaacgccaccgc 388 |||||||||||||||||||| Sbjct: 192 gttaccgccaacgccaccgc 211
>ref|XM_805413.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1 (DGF-1) (Tc00.1047053508149.10) partial mRNA Length = 7009 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||| ||||||||||||||||| Sbjct: 1571 ccgccaccgccaccgctgccgcca 1594
>gb|AC073314.4| Homo sapiens BAC clone RP11-143I21 from 7, complete sequence Length = 73888 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 53864 ccaccgctgccgccaccgcc 53883
>gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199216 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccaccgcc 401 ||||| ||||||||| |||||||||||| Sbjct: 140207 cgccaccgccaccgccgccgccaccgcc 140234
>gb|BC068505.1| Homo sapiens zinc finger protein 746, mRNA (cDNA clone MGC:87257 IMAGE:30347892), complete cds Length = 3706 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 1669 ccaccgctgccgccaccgcc 1650
>gb|AC128686.7| Homo sapiens 3 BAC RP11-265C3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 90578 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 gccaggagttcaacaagggcctgg 261 ||||||||||||||||| |||||| Sbjct: 68006 gccaggagttcaacaagagcctgg 67983
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16 Length = 349008 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cccacatcggcgtggagctg 38 |||||||||||||||||||| Sbjct: 151961 cccacatcggcgtggagctg 151980
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cccacatcggcgtggagctg 38 |||||||||||||||||||| Sbjct: 75015 cccacatcggcgtggagctg 75034
>ref|NM_152557.3| Homo sapiens zinc finger protein 746 (ZNF746), mRNA Length = 3706 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 1669 ccaccgctgccgccaccgcc 1650
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||||||||| ||||||||||| Sbjct: 89569 ccgccaacgccagcgctgccgcca 89592 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||||||||| ||||||||||| Sbjct: 82772 ccgccaacgccagcgctgccgcca 82795
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 459 ttaattgcaagtatatatat 478 |||||||||||||||||||| Sbjct: 96152 ttaattgcaagtatatatat 96171
>emb|AJ441131.1|AGA441131 Anopheles gambiae BAC clone 8N20 Length = 129790 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 372 accgccaacgccaccgctgccgccaccgccaacgtc 407 ||||||| |||| |||| ||||||||||||| |||| Sbjct: 117160 accgccaccgccgccgccgccgccaccgccaccgtc 117125
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence Length = 188410 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ctgcccagcgtctactccca 22 |||||||||||||||||||| Sbjct: 46983 ctgcccagcgtctactccca 46964
>ref|NM_200448.1| Danio rerio zgc:63470 (zgc:63470), mRNA Length = 1894 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 405 gagctggcgctcaaccacag 424
>dbj|AK128244.1| Homo sapiens cDNA FLJ46378 fis, clone TESTI4052775 Length = 3154 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 1133 ccaccgctgccgccaccgcc 1114
>dbj|AK055975.1| Homo sapiens cDNA FLJ31413 fis, clone NT2NE2000259, moderately similar to OOCYTE ZINC FINGER PROTEIN XLCOF6.1 Length = 2693 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 672 ccaccgctgccgccaccgcc 653
>ref|NM_058106.3| Drosophila melanogaster Aac11 CG6582-RA (Aac11), mRNA Length = 1877 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 1746 ccaccgctgccgccaccgcc 1727
>dbj|AK140431.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830003B06 product:tripartite motif protein 24, full insert sequence Length = 5158 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 374 cgccaacgccaccgctgccgccaccgcc 401 ||||| ||||||||| |||||||||||| Sbjct: 245 cgccaccgccaccgccgccgccaccgcc 218
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 acatcggcgtggagctggcg 41 |||||||||||||||||||| Sbjct: 2841176 acatcggcgtggagctggcg 2841157
>ref|XM_697187.1| PREDICTED: Danio rerio hypothetical protein LOC554542 (LOC554542), mRNA Length = 1867 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 405 gagctggcgctcaaccacag 424
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 6.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 250 acaagggcctggtcaggacggaggacgggcggtggc 285 |||||||| ||| ||||||| |||||||||||||| Sbjct: 40077 acaagggcgtggcgaggacggcggacgggcggtggc 40112
>gb|AY043265.1| Epiphyas postvittana nucleopolyhedrovirus, complete genome Length = 118584 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 caccgctgccgccaccgcca 402 |||||||||||||||||||| Sbjct: 117974 caccgctgccgccaccgcca 117993
>gb|AC010121.7|AC010121 Drosophila melanogaster, chromosome 2L, region 36C-36D, BAC clone BACR07M13, complete sequence Length = 172529 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 87032 ccaccgctgccgccaccgcc 87051
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||||||||| ||||||||||| Sbjct: 32472768 ccgccaacgccagcgctgccgcca 32472791 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 ccgccaacgccaccgctgccgcca 396 |||||||||||| ||||||||||| Sbjct: 32465971 ccgccaacgccagcgctgccgcca 32465994
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||| |||||||||||| Sbjct: 7263392 cgccaactccaccgccgccgccaccgcc 7263419
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 gccaacgccaccgctgccgccaccgcca 402 |||| ||||||||| ||||||||||||| Sbjct: 19979036 gccaccgccaccgccgccgccaccgcca 19979063
>dbj|AP007254.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa211K08 Length = 41043 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 gccaacgccaccgctgccgccaccgcca 402 |||| ||||||||| ||||||||||||| Sbjct: 35675 gccaccgccaccgccgccgccaccgcca 35702
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acgccaccgctgccgccaccgcca 402 ||||||||||||||||| |||||| Sbjct: 108430 acgccaccgctgccgccgccgcca 108453
>dbj|AP006065.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0076I16 Length = 151711 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acgccaccgctgccgccaccgcca 402 ||||||||||||||||| |||||| Sbjct: 100120 acgccaccgctgccgccgccgcca 100143
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 73750 ccaccgctgccgccaccgcc 73769
>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0498F03 Length = 54025 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 375 gccaacgccaccgctgccgccaccgcca 402 |||| ||||||||| ||||||||||||| Sbjct: 53184 gccaccgccaccgccgccgccaccgcca 53211
>emb|AL773581.25| Mouse DNA sequence from clone RP23-338H21 on chromosome 4, complete sequence Length = 56013 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gccaccgctgccgccaccgc 400 |||||||||||||||||||| Sbjct: 46357 gccaccgctgccgccaccgc 46338
>dbj|AK108991.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-G01, full insert sequence Length = 1593 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 acgccaccgctgccgccaccgcca 402 ||||||||||||||||| |||||| Sbjct: 419 acgccaccgctgccgccgccgcca 396
>dbj|AK067759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C20, full insert sequence Length = 594 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gccaacgccaccgctgccgccaccgcca 402 |||| ||||||||| ||||||||||||| Sbjct: 276 gccaccgccaccgccgccgccaccgcca 249
>dbj|AK063004.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-H09, full insert sequence Length = 599 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 375 gccaacgccaccgctgccgccaccgcca 402 |||| ||||||||| ||||||||||||| Sbjct: 275 gccaccgccaccgccgccgccaccgcca 248
>gb|BC085586.1| Danio rerio zgc:63470, mRNA (cDNA clone MGC:103680 IMAGE:7261816), complete cds Length = 1360 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 gagctggcgctcaaccacag 52 |||||||||||||||||||| Sbjct: 418 gagctggcgctcaaccacag 437
>gb|AF160921.1|AF160921 Drosophila melanogaster clone LD09852 BcDNA.LD09852 (BcDNA.LD09852) mRNA, complete cds Length = 1823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 1693 ccaccgctgccgccaccgcc 1674
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccaccgctgccgccaccgcc 401 |||||||||||||||||||| Sbjct: 91209 ccaccgctgccgccaccgcc 91228
>dbj|AP003038.3| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2342I9, complete sequence Length = 181452 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 ctctcccctttcctcaagaa 73 |||||||||||||||||||| Sbjct: 57067 ctctcccctttcctcaagaa 57086
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 acgccaccgctgccgccaccgcca 402 ||||| |||||||||||||||||| Sbjct: 45249 acgccgccgctgccgccaccgcca 45272
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||| |||||||||||| Sbjct: 7263271 cgccaactccaccgccgccgccaccgcc 7263298
>emb|AL390778.31| Human DNA sequence from clone RP11-399H11 on chromosome 9 Contains the 3' end of the OLFM1 gene for olfactomedin 1, two putative novel transcripts and two CpG islands, complete sequence Length = 221372 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 371 taccgccaacgccaccgctgccgccaccgcca 402 |||||||| ||||||||| |||||||||||| Sbjct: 47905 taccgccaccgccaccgccaccgccaccgcca 47874
>emb|AL831806.5|CNS08CAJ Oryza sativa chromosome 12, . BAC OSJNBb0106P21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141427 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 374 cgccaacgccaccgctgccgccaccgcc 401 ||||||| ||||||| |||||||||||| Sbjct: 119705 cgccaactccaccgccgccgccaccgcc 119732
>gb|U82976.1|CSU82976 Citrus sinensis pectinesterase mRNA, complete cds Length = 1967 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccg 399 |||||||||||||||||||| Sbjct: 904 cgccaccgctgccgccaccg 885
>gb|U82974.1|CSU82974 Citrus sinensis pectinesterase (PECS-1.2) gene, partial cds Length = 2953 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccg 399 |||||||||||||||||||| Sbjct: 208 cgccaccgctgccgccaccg 189
>gb|U82973.1|CSU82973 Citrus sinensis pectinesterase (PECS-1.1) gene, complete cds Length = 4606 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cgccaccgctgccgccaccg 399 |||||||||||||||||||| Sbjct: 1739 cgccaccgctgccgccaccg 1720
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 gccaacgccaccgctgccgccacc 398 ||||||||||||||||| |||||| Sbjct: 19317 gccaacgccaccgctgctgccacc 19294
>dbj|AB041808.1| Mus musculus brain cDNA, clone MNCb-5546 Length = 1833 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gccaccgctgccgccaccgc 400 |||||||||||||||||||| Sbjct: 38 gccaccgctgccgccaccgc 19 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,982,412 Number of Sequences: 3902068 Number of extensions: 3982412 Number of successful extensions: 77065 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 140 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75361 Number of HSP's gapped (non-prelim): 1694 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)