>RIOK2_HUMAN (Q9BVS4) Serine/threonine-protein kinase RIO2 (EC 2.7.11.1) (RIO|
           kinase 2)
          Length = 552

 Score =  148 bits (374), Expect = 1e-35
 Identities = 79/138 (57%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
 Frame = +1

Query: 169 KLDVNALRYLSKDDFRVLTACEMGMRNHEIVPAELVDRIAGLKHGGTYXXXXXXXXXXXX 348
           K++V  LRY+S+DDFRVLTA EMGM+NHEIVP  L+  IA LKHGG              
Sbjct: 3   KVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHKLI 62

Query: 349 HHD-CKKYDGFRLTYLGYDFLAIKTLVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAM 525
             +  K   G+RLT  GYD+LA+KTL +R V  SVG Q+GVGKESDI+ VA E+G   A+
Sbjct: 63  AWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQFAL 122

Query: 526 KLHRLGRTSFRAVKSKRD 579
           KLHRLGRTSFR +K+KRD
Sbjct: 123 KLHRLGRTSFRNLKNKRD 140

>RIOK2_MOUSE (Q9CQS5) Serine/threonine-protein kinase RIO2 (EC 2.7.11.1) (RIO|
           kinase 2)
          Length = 547

 Score =  148 bits (374), Expect = 1e-35
 Identities = 80/138 (57%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
 Frame = +1

Query: 169 KLDVNALRYLSKDDFRVLTACEMGMRNHEIVPAELVDRIAGLKHGGTYXXXXXXXXXXXX 348
           K++V  LRY+S+DDFRVLTA EMGM+NHEIVP  L+  IA LKHGG              
Sbjct: 3   KVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPCSLIASIASLKHGGCNKILRELVKHKLI 62

Query: 349 HHD-CKKYDGFRLTYLGYDFLAIKTLVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAM 525
             +  K   G+RLT  GYD+LA+KTL +R V  SVG Q+GVGKESDI+ VA E G  LA+
Sbjct: 63  AWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEAGQQLAL 122

Query: 526 KLHRLGRTSFRAVKSKRD 579
           KLHRLGRTSFR +K+KRD
Sbjct: 123 KLHRLGRTSFRNLKNKRD 140

>RIO2_YEAST (P40160) Serine/threonine-protein kinase RIO2 (EC 2.7.11.1)|
          Length = 425

 Score =  134 bits (337), Expect = 2e-31
 Identities = 68/140 (48%), Positives = 92/140 (65%), Gaps = 2/140 (1%)
 Frame = +1

Query: 166 MKLDVNALRYLSKDDFRVLTACEMGMRNHEIVPAELVDRIAGLKH--GGTYXXXXXXXXX 339
           MKLD + +RYL+ DDFRVL A E G R+HE+VP  L+ +I+G++   G            
Sbjct: 1   MKLDTSHMRYLTTDDFRVLQAVEQGSRSHEVVPTPLIHQISGMRSQSGTNRAISDLAKLS 60

Query: 340 XXXHHDCKKYDGFRLTYLGYDFLAIKTLVNRGVFASVGRQIGVGKESDIFEVATEDGTVL 519
                   KYDG+RLTY G D+LA+KT++NR    SVG  IGVGKESDI++V+ ++G   
Sbjct: 61  LISKMRNVKYDGYRLTYNGIDYLALKTMLNRDTVYSVGNTIGVGKESDIYKVSDKNGNPR 120

Query: 520 AMKLHRLGRTSFRAVKSKRD 579
            MK+HRLGRTSF +V++ RD
Sbjct: 121 VMKIHRLGRTSFHSVRNNRD 140

>Y1073_METJA (Q58473) Putative RIO-type serine/threonine-protein kinase MJ1073|
           (EC 2.7.11.1)
          Length = 270

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 35/112 (31%), Positives = 53/112 (47%)
 Frame = +1

Query: 241 MRNHEIVPAELVDRIAGLKHGGTYXXXXXXXXXXXXHHDCKKYDGFRLTYLGYDFLAIKT 420
           MR+HE VP + + R A +                      +   G+ ++  GYD LAI  
Sbjct: 1   MRHHEWVPLDEIVRKAKMPEKDVLYRLKRLNKFGFV---VRSTYGYAVSMGGYDALAINA 57

Query: 421 LVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAMKLHRLGRTSFRAVKSKR 576
            V +G+  ++G ++GVGKE D++ V   DG    +K H+ GRT F   K  R
Sbjct: 58  FVKKGILKAIGNKLGVGKEGDVYTVLLSDGREAVLKFHKHGRTCFTRGKRYR 109

>YOT3_CAEEL (P34649) Putative RIO-type serine/threonine-protein kinase ZK632.3|
           (EC 2.7.11.1)
          Length = 510

 Score = 34.3 bits (77), Expect = 0.26
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 424 VNRGVFASVGRQIGVGKESDIFEVATEDGTVLAMKLHRLGRTSFR 558
           +N+GVF SV   I  GKES +   A +  T  A+K+++   + F+
Sbjct: 241 INQGVFDSVDGIIATGKESAVLHAAQDSATSYAIKVYKTTLSEFK 285

>2ABA_SCHPO (Q12702) Protein phosphatase PP2A regulatory subunit B (PR55)|
           (Protein phosphatase 2A 55 kDa regulatory subunit)
          Length = 463

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 500 VATSNISDSFPTP----IWRPTEAKTPRLTKVFMARKSYPRYVSRN 375
           VA +N+SDSF +P    +  P++ + PRL    M   +YPR V  N
Sbjct: 128 VAENNLSDSFHSPMQGPLTTPSQLRLPRLNHHDMIIAAYPRRVYAN 173

>RIOK1_HUMAN (Q9BRS2) Serine/threonine-protein kinase RIO1 (EC 2.7.11.1) (RIO|
           kinase 1)
          Length = 568

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 11/46 (23%), Positives = 26/46 (56%)
 Frame = +1

Query: 421 LVNRGVFASVGRQIGVGKESDIFEVATEDGTVLAMKLHRLGRTSFR 558
           ++ RG+   +   I  GKE++++  +T +G   A+K+++     F+
Sbjct: 173 MLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYKTSILVFK 218

>YCSN_BACSU (P42972) Hypothetical oxidoreductase ycsN (EC 1.-.-.-)|
          Length = 300

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +1

Query: 115 SHPARLPPTVSSCEEETMKLDVNALRYLSKDD--FRVLTACE 234
           +HPA + P V S + E +   +NAL Y    D  FR+ TA +
Sbjct: 254 THPAGIMPIVGSGKRERISAAINALSYKLDQDQWFRIFTAVQ 295

>YIM2_YEAST (P40473) Hypothetical 39.5 kDa protein in SIM1-RPI1 intergenic|
           region
          Length = 351

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 136 PTVSSCEEETMKLDVNALRYLSKDDFRVLTACEMGM 243
           P  SS  E+++ L +  L+ L  DD + L AC+ G+
Sbjct: 48  PVESSQTEKSLSLRIRILKQLGFDDIQELNACDTGL 83

>MCM5_YEAST (P29496) Minichromosome maintenance protein 5 (Cell division|
           control protein 46)
          Length = 775

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
 Frame = -2

Query: 459 LATNRSKDSTINQSFYGEEVIPKICEPKPIILF----TIMVHQFV-LQQIPQ 319
           L+T  S+ S  N+S  G+E   K C P P I+       +  QF+ LQ+IP+
Sbjct: 212 LSTIESESSMANESNIGDESTKKNCGPDPYIIIHESSKFIDQQFLKLQEIPE 263

>LAP4_HUMAN (Q14160) LAP4 protein (Scribble homolog protein) (hScrib)|
          Length = 1630

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +1

Query: 160 ETMKLDVNALRYLSKDDFRVLTACEMGMRNHEI--VPAELVD 279
           E + LD N LR L K  FR+L   ++G+ ++EI  +P E+ +
Sbjct: 39  EELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVAN 80

>CLG1_YEAST (P35190) Cyclin-like protein CLG1|
          Length = 452

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
 Frame = -3

Query: 524 MANTVPSSVATSNISDSFPTPIWRPTEAKTPRLTKVFMARKSYPRYVSRNPSYFLQSWCT 345
           MANT      T   S  +P  +  P  + T   + V +AR+  P+Y+   PS  + +   
Sbjct: 1   MANTFKYYPETMGNSSGYPISLPFPKGSAT---SAVNVARQ-LPKYLGHVPSQSVHTQLP 56

Query: 344 SL----FFNKFRSTLYVPP 300
           S+    +FN+  ST Y PP
Sbjct: 57  SMASLGYFNQPSSTYYAPP 75

>LAP4_MOUSE (Q80U72) LAP4 protein (Scribble homolog protein)|
          Length = 1612

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +1

Query: 160 ETMKLDVNALRYLSKDDFRVLTACEMGMRNHEI--VPAELVD 279
           E + LD N LR L K  FR+L   ++G+ ++EI  +P E+ +
Sbjct: 39  EELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVAN 80


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,131,505
Number of Sequences: 219361
Number of extensions: 1252467
Number of successful extensions: 3732
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3701
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)