| Clone Name | baal2d20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190205.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 561 bits (283), Expect = e-157 Identities = 391/427 (91%) Strand = Plus / Plus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 427 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 486 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcgcaaccacgagatcgtgcccgcggagctc 273 ||||||||||||||| ||||||||||||||| |||||||||||||| || || |||||| Sbjct: 487 cgcgtcctcaccgccgtcgagatgggcatgcgtaaccacgagatcgttcctgccgagctc 546 Query: 274 gtcgaccgcatcgccggattgaagcatggaggcacatataaagtgctgcggaatttgttg 333 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 547 gtcgaccgcatcgccggattgaagcacggaggcacatataaagtgctgcggaatttgttg 606 Query: 334 aagaacaaactggtgcaccatgattgtaaaaagtatgatgggtttcggctcacatatctt 393 ||||||||| ||||||| |||||| || || |||||||| | |||||||||||||||| Sbjct: 607 aagaacaaattggtgcatcatgatgctactaaatatgatggttatcggctcacatatctt 666 Query: 394 gggtatgacttcctcgccataaaaactttggttaatcgtggagtctttgcttcggttggt 453 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 667 gggtatgatttcctcgccatcaaaaccttggttaatcgtggagtatttgcttcagttggt 726 Query: 454 cgccaaatcggtgttggaaaagagtcagatatatttgaggttgccacggaggatggaaca 513 || ||||| ||||||||||| |||||||| || |||||||||||||| |||||||| || Sbjct: 727 cggcaaattggtgttggaaaggagtcagacatctttgaggttgccacagaggatggtacc 786 Query: 514 gtgttggccatgaagcttcataggttgggtaggacatcttttagggctgtcaaatcaaag 573 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 787 gttttggccatgaagcttcataggttgggtaggacatcttttagggctgtgaaatccaag 846 Query: 574 cgtgact 580 ||||||| Sbjct: 847 cgtgact 853
>dbj|AK119166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F04, full insert sequence Length = 1442 Score = 561 bits (283), Expect = e-157 Identities = 391/427 (91%) Strand = Plus / Plus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 191 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 250 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcgcaaccacgagatcgtgcccgcggagctc 273 ||||||||||||||| ||||||||||||||| |||||||||||||| || || |||||| Sbjct: 251 cgcgtcctcaccgccgtcgagatgggcatgcgtaaccacgagatcgttcctgccgagctc 310 Query: 274 gtcgaccgcatcgccggattgaagcatggaggcacatataaagtgctgcggaatttgttg 333 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 311 gtcgaccgcatcgccggattgaagcacggaggcacatataaagtgctgcggaatttgttg 370 Query: 334 aagaacaaactggtgcaccatgattgtaaaaagtatgatgggtttcggctcacatatctt 393 ||||||||| ||||||| |||||| || || |||||||| | |||||||||||||||| Sbjct: 371 aagaacaaattggtgcatcatgatgctactaaatatgatggttatcggctcacatatctt 430 Query: 394 gggtatgacttcctcgccataaaaactttggttaatcgtggagtctttgcttcggttggt 453 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 431 gggtatgatttcctcgccatcaaaaccttggttaatcgtggagtatttgcttcagttggt 490 Query: 454 cgccaaatcggtgttggaaaagagtcagatatatttgaggttgccacggaggatggaaca 513 || ||||| ||||||||||| |||||||| || |||||||||||||| |||||||| || Sbjct: 491 cggcaaattggtgttggaaaggagtcagacatctttgaggttgccacagaggatggtacc 550 Query: 514 gtgttggccatgaagcttcataggttgggtaggacatcttttagggctgtcaaatcaaag 573 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 551 gttttggccatgaagcttcataggttgggtaggacatcttttagggctgtgaaatccaag 610 Query: 574 cgtgact 580 ||||||| Sbjct: 611 cgtgact 617
>dbj|AK073376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030B16, full insert sequence Length = 1910 Score = 561 bits (283), Expect = e-157 Identities = 391/427 (91%) Strand = Plus / Plus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 156 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 215 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcgcaaccacgagatcgtgcccgcggagctc 273 ||||||||||||||| ||||||||||||||| |||||||||||||| || || |||||| Sbjct: 216 cgcgtcctcaccgccgtcgagatgggcatgcgtaaccacgagatcgttcctgccgagctc 275 Query: 274 gtcgaccgcatcgccggattgaagcatggaggcacatataaagtgctgcggaatttgttg 333 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 276 gtcgaccgcatcgccggattgaagcacggaggcacatataaagtgctgcggaatttgttg 335 Query: 334 aagaacaaactggtgcaccatgattgtaaaaagtatgatgggtttcggctcacatatctt 393 ||||||||| ||||||| |||||| || || |||||||| | |||||||||||||||| Sbjct: 336 aagaacaaattggtgcatcatgatgctactaaatatgatggttatcggctcacatatctt 395 Query: 394 gggtatgacttcctcgccataaaaactttggttaatcgtggagtctttgcttcggttggt 453 |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 396 gggtatgatttcctcgccatcaaaaccttggttaatcgtggagtatttgcttcagttggt 455 Query: 454 cgccaaatcggtgttggaaaagagtcagatatatttgaggttgccacggaggatggaaca 513 || ||||| ||||||||||| |||||||| || |||||||||||||| |||||||| || Sbjct: 456 cggcaaattggtgttggaaaggagtcagacatctttgaggttgccacagaggatggtacc 515 Query: 514 gtgttggccatgaagcttcataggttgggtaggacatcttttagggctgtcaaatcaaag 573 || ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 516 gttttggccatgaagcttcataggttgggtaggacatcttttagggctgtgaaatccaag 575 Query: 574 cgtgact 580 ||||||| Sbjct: 576 cgtgact 582
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 368 atgatgggtttcggctcacatatcttgggtatgacttcctcgccataaaaactttggtta 427 ||||||| | |||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 38627898 atgatggttatcggctcacatatcttgggtatgatttcctcgccatcaaaaccttggtta 38627839 Query: 428 atcgtggagtctttgcttcggttggtcgccaaatcggtgttggaaaagagtcag 481 |||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 38627838 atcgtggagtatttgcttcagttggtcggcaaattggtgttggaaaggagtcag 38627785 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 487 tttgaggttgccacggaggatggaacagtgttggccatgaagcttcataggttgggtagg 546 |||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 38627682 tttgaggttgccacagaggatggtaccgttttggccatgaagcttcataggttgggtagg 38627623 Query: 547 acatcttttagggctgtcaaatcaaagcgtgact 580 ||||||||||||||||| ||||| |||||||||| Sbjct: 38627622 acatcttttagggctgtgaaatccaagcgtgact 38627589 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 38628676 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 38628617 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcg 245 ||||||||||||||| ||||||||||||||| Sbjct: 38628616 cgcgtcctcaccgccgtcgagatgggcatgcg 38628585 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 301 ggaggcacatataaagtgctgcggaatttgttgaagaacaaactggtgcaccatgat 357 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 38628047 ggaggcacatataaagtgctgcggaatttgttgaagaacaaattggtgcatcatgat 38627991 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 250 cacgagatcgtgcccgcggagctcgtcgaccgcatcgccggattgaag 297 ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 38628477 cacgagatcgttcctgccgagctcgtcgaccgcatcgccggattgaag 38628430
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 368 atgatgggtttcggctcacatatcttgggtatgacttcctcgccataaaaactttggtta 427 ||||||| | |||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 148579 atgatggttatcggctcacatatcttgggtatgatttcctcgccatcaaaaccttggtta 148520 Query: 428 atcgtggagtctttgcttcggttggtcgccaaatcggtgttggaaaagagtcag 481 |||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 148519 atcgtggagtatttgcttcagttggtcggcaaattggtgttggaaaggagtcag 148466 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 487 tttgaggttgccacggaggatggaacagtgttggccatgaagcttcataggttgggtagg 546 |||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 148363 tttgaggttgccacagaggatggtaccgttttggccatgaagcttcataggttgggtagg 148304 Query: 547 acatcttttagggctgtcaaatcaaagcgtgact 580 ||||||||||||||||| ||||| |||||||||| Sbjct: 148303 acatcttttagggctgtgaaatccaagcgtgact 148270 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 149357 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 149298 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcg 245 ||||||||||||||| ||||||||||||||| Sbjct: 149297 cgcgtcctcaccgccgtcgagatgggcatgcg 149266 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 301 ggaggcacatataaagtgctgcggaatttgttgaagaacaaactggtgcaccatgat 357 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 148728 ggaggcacatataaagtgctgcggaatttgttgaagaacaaattggtgcatcatgat 148672 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 250 cacgagatcgtgcccgcggagctcgtcgaccgcatcgccggattgaag 297 ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 149158 cacgagatcgttcctgccgagctcgtcgaccgcatcgccggattgaag 149111
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 368 atgatgggtttcggctcacatatcttgggtatgacttcctcgccataaaaactttggtta 427 ||||||| | |||||||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 85871 atgatggttatcggctcacatatcttgggtatgatttcctcgccatcaaaaccttggtta 85812 Query: 428 atcgtggagtctttgcttcggttggtcgccaaatcggtgttggaaaagagtcag 481 |||||||||| |||||||| |||||||| ||||| ||||||||||| ||||||| Sbjct: 85811 atcgtggagtatttgcttcagttggtcggcaaattggtgttggaaaggagtcag 85758 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Minus Query: 487 tttgaggttgccacggaggatggaacagtgttggccatgaagcttcataggttgggtagg 546 |||||||||||||| |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 85655 tttgaggttgccacagaggatggtaccgttttggccatgaagcttcataggttgggtagg 85596 Query: 547 acatcttttagggctgtcaaatcaaagcgtgact 580 ||||||||||||||||| ||||| |||||||||| Sbjct: 85595 acatcttttagggctgtgaaatccaagcgtgact 85562 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Minus Query: 154 gaggaggagaccatgaagctcgacgtgaacgccctccgctacctctccaaggacgacttc 213 ||||||||| |||||||||| ||||||||||| |||||||||||||||||||| |||||| Sbjct: 86649 gaggaggaggccatgaagcttgacgtgaacgcgctccgctacctctccaaggatgacttc 86590 Query: 214 cgcgtcctcaccgcctgcgagatgggcatgcg 245 ||||||||||||||| ||||||||||||||| Sbjct: 86589 cgcgtcctcaccgccgtcgagatgggcatgcg 86558 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Minus Query: 301 ggaggcacatataaagtgctgcggaatttgttgaagaacaaactggtgcaccatgat 357 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 86020 ggaggcacatataaagtgctgcggaatttgttgaagaacaaattggtgcatcatgat 85964 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 250 cacgagatcgtgcccgcggagctcgtcgaccgcatcgccggattgaag 297 ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 86450 cacgagatcgttcctgccgagctcgtcgaccgcatcgccggattgaag 86403
>gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete sequence Length = 176231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 208 gacttccgcgtcctcaccgcctgcgagatgggcatg 243 ||||||||||||||||||||| ||||||||||||| Sbjct: 147184 gacttccgcgtcctcaccgccatcgagatgggcatg 147149
>ref|NM_143108.1| Drosophila melanogaster CG11859-RA (CG11859), mRNA Length = 1617 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 208 gacttccgcgtcctcaccgcctgcgagatgggcatg 243 ||||||||||||||||||||| ||||||||||||| Sbjct: 46 gacttccgcgtcctcaccgccatcgagatgggcatg 81
>gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, region 96C-96D, BAC clone BACR17E12, complete sequence Length = 184887 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 208 gacttccgcgtcctcaccgcctgcgagatgggcatg 243 ||||||||||||||||||||| ||||||||||||| Sbjct: 160561 gacttccgcgtcctcaccgccatcgagatgggcatg 160596
>gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, region 96D-96D, BAC clone BACR06L08, complete sequence Length = 170220 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 208 gacttccgcgtcctcaccgcctgcgagatgggcatg 243 ||||||||||||||||||||| ||||||||||||| Sbjct: 96503 gacttccgcgtcctcaccgccatcgagatgggcatg 96538
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 208 gacttccgcgtcctcaccgcctgcgagatgggcatg 243 ||||||||||||||||||||| ||||||||||||| Sbjct: 100239 gacttccgcgtcctcaccgccatcgagatgggcatg 100274
>ref|NM_114986.1| Arabidopsis thaliana ATP binding / protein kinase AT3G51270 mRNA, complete cds Length = 1419 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 463 ggtgttggaaaagagtcagatatatttgaggttgccacggaggatggaacagtgttggcc 522 |||||||| ||||||||||| ||||||||||| || ||| |||||||| | | || Sbjct: 331 ggtgttggtaaagagtcagacatatttgaggtcgctcaggaagatggaactattctagca 390 Query: 523 atgaagcttcataggttgggtaggacatcttttagggctgtcaaatcaaagcgtgact 580 |||||| | ||||| | || || || || ||||||||||||||||| |||||||||| Sbjct: 391 atgaagttacatagactagggagaacctcctttagggctgtcaaatctaagcgtgact 448
>emb|AL132980.3|ATF24M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F24M12 Length = 129516 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Plus Query: 553 tttagggctgtcaaatcaaagcgtgact 580 ||||||||||||||||| |||||||||| Sbjct: 93989 tttagggctgtcaaatctaagcgtgact 94016
>emb|CT009567.9| Mouse DNA sequence from clone RP23-50H13 on chromosome 16, complete sequence Length = 213704 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 104 gccagccagccagccatcccgcccgcc 130 |||||||||||||||| |||||||||| Sbjct: 41491 gccagccagccagccagcccgcccgcc 41465
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 264 cgcggagctcgtcgaccgcatcg 286 ||||||||||||||||||||||| Sbjct: 2493856 cgcggagctcgtcgaccgcatcg 2493834
>ref|XM_748384.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g11730) partial mRNA Length = 1239 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 460 atcggtgttggaaaagagtcagatat 485 ||||||||||| |||||||||||||| Sbjct: 292 atcggtgttgggaaagagtcagatat 317
>gb|AC007813.4|AC007813 Drosophila melanogaster, chromosome 3R, region 91C-91D, BAC clone BACR40J10, complete sequence Length = 160089 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagccatc 121 |||||||||||||||||||||| Sbjct: 68831 cgccgccagccagccagccatc 68810
>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone BACR01F15, complete sequence Length = 186989 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagccatc 121 |||||||||||||||||||||| Sbjct: 152219 cgccgccagccagccagccatc 152198
>gb|BT003463.1| Drosophila melanogaster RH05973 full insert cDNA Length = 4524 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagccatc 121 |||||||||||||||||||||| Sbjct: 1305 cgccgccagccagccagccatc 1326
>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the complete sequence Length = 255619 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagccatc 121 |||||||||||||||||||||| Sbjct: 164964 cgccgccagccagccagccatc 164943
>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence Length = 182492 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 104 gccagccagccagccatcccgcccgcctgccgc 136 ||||||||||||||||| | ||| ||||||||| Sbjct: 50233 gccagccagccagccattcggccagcctgccgc 50265
>ref|XM_846303.1| PREDICTED: Canis familiaris similar to Protein C20orf29 (LOC609098), mRNA Length = 603 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 acgcctcctcctcgaccacct 77 ||||||||||||||||||||| Sbjct: 429 acgcctcctcctcgaccacct 449
>ref|XM_752832.1| Ustilago maydis 521 hypothetical protein (UM01778.1) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgcctcctcctcgaccacctc 78 ||||||||||||||||||||| Sbjct: 661 cgcctcctcctcgaccacctc 641 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgcctcctcctcgaccacctc 78 ||||||||||||||||||||| Sbjct: 619 cgcctcctcctcgaccacctc 599 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 cgcctcctcctcgaccacctc 78 ||||||||||||||||||||| Sbjct: 598 cgcctcctcctcgaccacctc 578
>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete sequence Length = 192971 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 101 gccgccagccagccagccatcccgcccgc 129 ||||||||||||||||||| || |||||| Sbjct: 158891 gccgccagccagccagccagccagcccgc 158919
>ref|XM_502939.1| Yarrowia lipolytica CLIB122, YALI0D17424g predicted mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ctacctctccaaggacgactt 212 ||||||||||||||||||||| Sbjct: 627 ctacctctccaaggacgactt 647
>ref|NM_001039853.1| Monodelphis domestica bitter taste receptor Modo-T2R21 (T2R21), mRNA Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 agcatggaggcacatataaag 316 ||||||||||||||||||||| Sbjct: 646 agcatggaggcacatataaag 666
>gb|AC151926.2| Phaeodactylum tricornutum clone JGIAHOK-5A5, complete sequence Length = 43146 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cgcctcctcctcgaccacctc 78 ||||||||||||||||||||| Sbjct: 10186 cgcctcctcctcgaccacctc 10206
>emb|BX511205.2|RN120J22 Rattus norvegicus chromosome 1 BAC RP32-120J22, complete sequence Length = 160764 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 102 ccgccagccagccagccatcccgcc 126 |||||||||||||||||| |||||| Sbjct: 68395 ccgccagccagccagccagcccgcc 68419
>gb|AC117831.6| Mus musculus chromosome 15, clone RP24-106E17, complete sequence Length = 173772 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 102 ccgccagccagccagccatcccgcccgcc 130 ||||||||||||| |||| |||||||||| Sbjct: 138532 ccgccagccagcccgccagcccgcccgcc 138560
>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete sequence Length = 257907 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 104 gccagccagccagccatcccgcccgcctgccgc 136 ||||||||||||||||| | ||| ||||||||| Sbjct: 42147 gccagccagccagccattcggccagcctgccgc 42179
>gb|AC154237.1| Mus musculus BAC clone RP24-162O18 from 17, complete sequence Length = 168481 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 101 gccgccagccagccagccatcccgcccgc 129 ||||||||||||||||||| || |||||| Sbjct: 145673 gccgccagccagccagccagccagcccgc 145645
>gb|AC139317.4| Mus musculus BAC clone RP24-495N6 from 15, complete sequence Length = 182415 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 102 ccgccagccagccagccatcccgcccgcc 130 ||||||||||||| |||| |||||||||| Sbjct: 163272 ccgccagccagcccgccagcccgcccgcc 163244
>dbj|AB249748.1| Monodelphis domestica DNA for bitter taste receptor, complete cds, clone: Modo-T2R21 Length = 912 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 agcatggaggcacatataaag 316 ||||||||||||||||||||| Sbjct: 646 agcatggaggcacatataaag 666
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 ctacctctccaaggacgactt 212 ||||||||||||||||||||| Sbjct: 2147274 ctacctctccaaggacgactt 2147294
>gb|AC166060.2| Mus musculus BAC clone RP23-185O8 from chromosome 9, complete sequence Length = 198365 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 gccagccagccagccatccc 123 |||||||||||||||||||| Sbjct: 94440 gccagccagccagccatccc 94421
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 264 cgcggagctcgtcgaccgcatcgc 287 ||||| |||||||||||||||||| Sbjct: 2715098 cgcggcgctcgtcgaccgcatcgc 2715075
>gb|AC123882.6| Mus musculus chromosome 1, clone RP23-447L15, complete sequence Length = 177559 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 172787 cgccgccagccagccagcca 172806
>gb|AF497474.1| Aegilops tauschii leucine-rich-like protein gene, partial cds; seed globulin (Glo-2) gene, complete cds; HMW-glutenin (Glu-Dty) gene, Glu-Dty-T2 allele, complete cds; and HMW-glutenin (HMW) gene, HMW-Dtx2 allele, complete cds Length = 102842 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 atcttttagggctgtcaaat 568 |||||||||||||||||||| Sbjct: 1336 atcttttagggctgtcaaat 1355
>gb|AC167135.3| Mus musculus chromosome 1, clone RP24-335L18, complete sequence Length = 157775 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 32115 cgccgccagccagccagcca 32134
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gcctcctcctcgaccacctcatcccctc 86 ||||||||||| |||||||| ||||||| Sbjct: 10055082 gcctcctcctccaccacctcctcccctc 10055109
>gb|AC160101.7| Mus musculus chromosome 1, clone RP24-126E20, complete sequence Length = 159705 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 120088 cgccgccagccagccagcca 120069
>ref|XR_003561.1| PREDICTED: Mus musculus similar to centromere protein E (LOC671773), mRNA Length = 2605 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 atgacttcctcgccataaaaactt 421 ||||||||||| |||||||||||| Sbjct: 1444 atgacttcctcaccataaaaactt 1467
>ref|XR_001749.1| PREDICTED: Mus musculus similar to centromere protein E (LOC665569), mRNA Length = 2605 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 atgacttcctcgccataaaaactt 421 ||||||||||| |||||||||||| Sbjct: 1444 atgacttcctcaccataaaaactt 1467
>emb|CR707115.2|CNS0G8K7 Tetraodon nigroviridis full-length cDNA Length = 577 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gcctcctcctcgaccacctc 78 |||||||||||||||||||| Sbjct: 235 gcctcctcctcgaccacctc 216
>emb|CR681037.1|CNS0FOFT Tetraodon nigroviridis full-length cDNA Length = 1308 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gcctcctcctcgaccacctc 78 |||||||||||||||||||| Sbjct: 818 gcctcctcctcgaccacctc 799
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gcctcctcctcgaccacctcatcccctc 86 ||||||||||| |||||||| ||||||| Sbjct: 104998 gcctcctcctccaccacctcctcccctc 105025
>emb|CR665715.2|CNS0FCMX Tetraodon nigroviridis full-length cDNA Length = 1337 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gcctcctcctcgaccacctc 78 |||||||||||||||||||| Sbjct: 829 gcctcctcctcgaccacctc 810
>emb|AL512383.11| Human DNA sequence from clone RP11-193J6 on chromosome 1 Contains part of the PRDM16 gene for PR domain containing 16, complete sequence Length = 44335 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccagccagccagccatccc 123 |||||||||||||||||||| Sbjct: 7714 gccagccagccagccatccc 7733
>emb|AL139389.16| Human DNA sequence from clone RP11-411K7 on chromosome 6 Contains the 3' end of a novel gene, an enhancer of rudimentary homolog (Drosophila)(ERH) pseudogene, the 5' end of a novel gene and a novel gene, complete sequence Length = 156721 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 atgaagcttcataggttgggtagg 546 |||||||||||| ||||||||||| Sbjct: 146175 atgaagcttcatgggttgggtagg 146198
>emb|AL049750.1|HSE141E2 Human DNA sequence from clone LL22NC01-141E2 on chromosome 22 Contains GSSs.n, complete sequence Length = 23019 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 agatatatttgaggttgcca 499 |||||||||||||||||||| Sbjct: 19169 agatatatttgaggttgcca 19188
>gb|AC103419.6| Rattus norvegicus 9 BAC CH230-145A24 (Children's Hospital Oakland Research Institute) complete sequence Length = 217001 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 104 gccagccagccagccatcccgcccgcctgccg 135 |||||||||||||||| || ||| |||||||| Sbjct: 86001 gccagccagccagccagccagccagcctgccg 86032
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agcgccgccagccagccagc 117 |||||||||||||||||||| Sbjct: 3310437 agcgccgccagccagccagc 3310456
>gb|AC087277.11| Homo sapiens chromosome 11, clone RP11-514F3, complete sequence Length = 196859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 agctgcgaggaggagaccat 167 |||||||||||||||||||| Sbjct: 103181 agctgcgaggaggagaccat 103162
>gb|AC096751.3| Homo sapiens BAC clone RP11-440I14 from 4, complete sequence Length = 174642 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 gaatttgttgaagaacaaac 343 |||||||||||||||||||| Sbjct: 148505 gaatttgttgaagaacaaac 148524
>gb|AC137634.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078C05, complete sequence Length = 122116 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gcctcctcctcgaccacctcatcccctc 86 ||||||||||| |||||||| ||||||| Sbjct: 703 gcctcctcctccaccacctcctcccctc 730
>gb|DQ109949.1| Aipysurus laevis clone AL104_f6 microsatellite sequence Length = 434 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccagccagccagccatccc 123 |||||||||||||||||||| Sbjct: 255 gccagccagccagccatccc 274
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 382501 cgccgccagccagccagcca 382482
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 22991330 cgccgccagccagccagcca 22991349 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 17084491 cgccgccagccagccagcca 17084510
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 13781209 cgccgccagccagccagcca 13781228
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 59 gcctcctcctcgaccacctcatcccctc 86 ||||||||||| |||||||| ||||||| Sbjct: 10053203 gcctcctcctccaccacctcctcccctc 10053230
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ggagctcgtcgaccgcatcg 286 |||||||||||||||||||| Sbjct: 8337506 ggagctcgtcgaccgcatcg 8337525
>gb|AC068279.6| Homo sapiens BAC clone RP11-153P14 from 2, complete sequence Length = 135351 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccagccagccagccatccc 123 |||||||||||||||||||| Sbjct: 111178 gccagccagccagccatccc 111197
>gb|AC104981.9| Homo sapiens chromosome 17, clone RP11-316M20, complete sequence Length = 193181 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gccagccagccagccatccc 123 |||||||||||||||||||| Sbjct: 122090 gccagccagccagccatccc 122109
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gcctcctcctcgaccacctc 78 |||||||||||||||||||| Sbjct: 66577 gcctcctcctcgaccacctc 66596
>dbj|AP005646.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1077E08 Length = 145275 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 35349 cgccgccagccagccagcca 35368
>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1121_A05 Length = 172668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 66544 cgccgccagccagccagcca 66563
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 37617 cgccgccagccagccagcca 37636
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acctcgccgtccaccaccgc 25 |||||||||||||||||||| Sbjct: 137479 acctcgccgtccaccaccgc 137498
>gb|AC132226.3| Mus musculus BAC clone RP24-571A14 from 1, complete sequence Length = 180303 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 atgacttcctcgccataaaaactt 421 ||||||||||| |||||||||||| Sbjct: 67411 atgacttcctcaccataaaaactt 67434
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 agcgccgccagccagccagc 117 |||||||||||||||||||| Sbjct: 3306585 agcgccgccagccagccagc 3306604
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 gccagccatcccgcccgcct 131 |||||||||||||||||||| Sbjct: 3240159 gccagccatcccgcccgcct 3240140
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 382501 cgccgccagccagccagcca 382482
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 cgccgccagccagccagcca 119 |||||||||||||||||||| Sbjct: 89819 cgccgccagccagccagcca 89800
>emb|AL611984.15| Mouse DNA sequence from clone RP23-416J8 on chromosome 4, complete sequence Length = 209904 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 gccagccagccagccatcccgccc 127 ||||||||||||||||||| |||| Sbjct: 68965 gccagccagccagccatccggccc 68988
>dbj|AB004855.2| Streptomyces cyaneus DNA for inhibition of morphological differentiation, complete cds Length = 3073 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gctcgtcgaccgcatcgccg 289 |||||||||||||||||||| Sbjct: 2032 gctcgtcgaccgcatcgccg 2051 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,450,971 Number of Sequences: 3902068 Number of extensions: 4450971 Number of successful extensions: 113916 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 76 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112296 Number of HSP's gapped (non-prelim): 1611 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)