Clone Name	baal1o19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	1019	0.0
2	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	1011	0.0
3	gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, parti...	1011	0.0
4	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	1011	0.0
5	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	1011	0.0
6	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	1011	0.0
7	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	1011	0.0
8	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	1011	0.0
9	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	1011	0.0
10	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	1011	0.0
11	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	1011	0.0
12	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	1011	0.0
13	gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene,...	1011	0.0
14	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	1011	0.0
15	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	1011	0.0
16	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	1011	0.0
17	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	1011	0.0
18	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	1011	0.0
19	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	1011	0.0
20	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	1011	0.0
21	dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clon...	1011	0.0
22	dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clon...	1011	0.0
23	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	1011	0.0
24	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	1011	0.0
25	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	1011	0.0
26	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	1003	0.0
27	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	1003	0.0
28	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	1003	0.0
29	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	995	0.0
30	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	995	0.0
31	dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clon...	995	0.0
32	dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clon...	991	0.0
33	dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clon...	983	0.0
34	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	963	0.0
35	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	963	0.0
36	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	963	0.0
37	dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clon...	950	0.0
38	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	833	0.0
39	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	833	0.0
40	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	833	0.0
41	dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clon...	821	0.0
42	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	817	0.0
43	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	817	0.0
44	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	817	0.0
45	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	815	0.0
46	dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clon...	815	0.0
47	dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	815	0.0
48	dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clon...	811	0.0
49	gb|AY582139.1| Panax ginseng chloroplast, complete genome	811	0.0
50	dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clon...	801	0.0
51	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	793	0.0
52	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	793	0.0
53	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	793	0.0
54	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	785	0.0
55	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	785	0.0
56	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	777	0.0
57	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	777	0.0
58	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	777	0.0
59	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	777	0.0
60	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	773	0.0
61	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	773	0.0
62	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	773	0.0
63	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	773	0.0
64	dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clon...	773	0.0
65	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	773	0.0
66	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	773	0.0
67	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	773	0.0
68	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	773	0.0
69	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	765	0.0
70	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	761	0.0
71	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	761	0.0
72	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	761	0.0
73	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	755	0.0
74	gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence	749	0.0
75	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	741	0.0
76	emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC...	741	0.0
77	emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC...	739	0.0
78	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	737	0.0
79	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	737	0.0
80	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	735	0.0
81	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	735	0.0
82	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	735	0.0
83	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	735	0.0
84	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	729	0.0
85	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	720	0.0
86	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	720	0.0
87	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	720	0.0
88	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	718	0.0
89	dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequen...	714	0.0
90	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	714	0.0
91	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	704	0.0
92	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	702	0.0
93	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	700	0.0
94	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	700	0.0
95	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	700	0.0
96	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	700	0.0
97	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	700	0.0
98	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	698	0.0
99	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	698	0.0
100	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	694	0.0
101	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	694	0.0
102	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	692	0.0
103	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	690	0.0
104	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	690	0.0
105	gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplas...	676	0.0
106	dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clon...	672	0.0
107	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	672	0.0
108	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	658	0.0
109	dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR ...	654	0.0
110	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	652	0.0
111	dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast ...	644	0.0
112	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	644	0.0
113	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	644	0.0
114	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	642	0.0
115	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	642	0.0
116	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	642	0.0
117	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	642	0.0
118	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	642	0.0
119	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	638	e-180
120	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	632	e-178
121	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	613	e-172
122	gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial...	607	e-170
123	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	577	e-161
124	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	565	e-158
125	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	565	e-158
126	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	561	e-157
127	gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence	549	e-153
128	dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clon...	462	e-127
129	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	440	e-120
130	dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clon...	438	e-120
131	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	428	e-117
132	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	424	e-115
133	gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S ...	418	e-114
134	gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal int...	418	e-114
135	gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence	416	e-113
136	gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1...	404	e-109
137	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	396	e-107
138	dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clon...	369	7e-99
139	dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clon...	369	7e-99
140	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	359	6e-96
141	emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC...	355	1e-94
142	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	315	9e-83
143	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	315	9e-83
144	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	313	3e-82
145	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	293	3e-76
146	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	291	1e-75
147	gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome...	289	5e-75
148	gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome...	289	5e-75
149	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	289	5e-75
150	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	289	5e-75
151	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	287	2e-74
152	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	287	2e-74
153	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	283	3e-73
154	emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21...	283	3e-73
155	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	281	1e-72
156	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	281	1e-72
157	dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic D...	281	1e-72
158	gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large...	268	2e-68
159	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	268	2e-68
160	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	264	3e-67
161	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	264	3e-67
162	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	264	3e-67
163	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	254	3e-64
164	dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete ge...	246	7e-62
165	gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence	240	4e-60
166	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	240	4e-60
167	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	240	4e-60
168	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	240	4e-60
169	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	236	6e-59
170	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	232	1e-57
171	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	230	4e-57
172	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	228	2e-56
173	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	218	1e-53
174	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	218	1e-53
175	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	218	1e-53
176	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	218	1e-53
177	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	218	1e-53
178	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	218	1e-53
179	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	218	1e-53
180	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	218	1e-53
181	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	218	1e-53
182	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	218	1e-53
183	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	218	1e-53
184	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	218	1e-53
185	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	218	1e-53
186	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	218	1e-53
187	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	218	1e-53
188	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	218	1e-53
189	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	214	2e-52
190	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	212	9e-52
191	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	212	9e-52
192	emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL ge...	212	9e-52
193	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	210	4e-51
194	gb|L43500.1|RTCCPRRNL Carteria olivieri	206	6e-50
195	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	206	6e-50
196	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	206	6e-50
197	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	202	9e-49
198	emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for...	202	9e-49
199	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	198	1e-47
200	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	198	1e-47
201	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	198	1e-47
202	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	198	1e-47
203	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	198	1e-47
204	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	198	1e-47
205	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	198	1e-47
206	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	198	1e-47
207	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	198	1e-47
208	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	198	1e-47
209	emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene...	198	1e-47
210	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	198	1e-47
211	gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s &...	198	1e-47
212	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	196	5e-47
213	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	196	5e-47
214	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	194	2e-46
215	dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic D...	194	2e-46
216	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	194	2e-46
217	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	194	2e-46
218	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	194	2e-46
219	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	192	9e-46
220	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	192	9e-46
221	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	190	3e-45
222	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	190	3e-45
223	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	186	5e-44
224	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	186	5e-44
225	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	186	5e-44
226	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	184	2e-43
227	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	182	8e-43
228	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	182	8e-43
229	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	178	1e-41
230	gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA...	178	1e-41
231	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	178	1e-41
232	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	176	5e-41
233	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	176	5e-41
234	gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA...	176	5e-41
235	gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA...	176	5e-41
236	gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA...	176	5e-41
237	gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA...	176	5e-41
238	gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA...	176	5e-41
239	gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA...	176	5e-41
240	gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA...	176	5e-41
241	gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RN...	176	5e-41
242	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	176	5e-41
243	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	176	5e-41
244	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	176	5e-41
245	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	176	5e-41
246	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	174	2e-40
247	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	174	2e-40
248	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	174	2e-40
249	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	174	2e-40
250	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	174	2e-40
251	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	174	2e-40
252	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	174	2e-40
253	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	174	2e-40
254	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	174	2e-40
255	emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmati...	174	2e-40
256	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	174	2e-40
257	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	174	2e-40
258	emb|AJ879836.1| Uncultured organism 23S rRNA gene, clone LP4-6A	174	2e-40
259	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	170	3e-39
260	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	170	3e-39
261	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	170	3e-39
262	emb|X68893.1|CHCIRRNX1 Chloroplast Chlamydomonas indica rrnL gen...	170	3e-39
263	emb|X68913.1|CHCMRRNX1 Chloroplast C.moewusii rrnL gene, exon 1	170	3e-39
264	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	170	3e-39
265	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	168	1e-38
266	gb|L43540.1|DUNCPRRNL Dunaliella parva	168	1e-38
267	gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA...	168	1e-38
268	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	168	1e-38
269	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	168	1e-38
270	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	167	5e-38
271	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	167	5e-38
272	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
273	dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
274	dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic D...	167	5e-38
275	emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	167	5e-38
276	emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) ...	167	5e-38
277	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	167	5e-38
278	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	167	5e-38
279	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	167	5e-38
280	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	165	2e-37
281	emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,...	165	2e-37
282	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	165	2e-37
283	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	165	2e-37
284	emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon...	165	2e-37
285	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	163	8e-37
286	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	163	8e-37
287	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	163	8e-37
288	dbj|AB181958.1| Heterosigma akashiwo chloroplast genes for 16S r...	163	8e-37
289	dbj|AB181956.1| Heterosigma akashiwo chloroplast genes for 16S r...	163	8e-37
290	dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clon...	163	8e-37
291	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	163	8e-37
292	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	161	3e-36
293	gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, co...	161	3e-36
294	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	161	3e-36
295	gb|AY389861.1| Uncultured chlorophyte large subunit ribosomal RN...	159	1e-35
296	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	159	1e-35
297	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	159	1e-35
298	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	159	1e-35
299	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	159	1e-35
300	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	159	1e-35
301	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	157	5e-35
302	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	157	5e-35
303	gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, p...	157	5e-35
304	dbj|AB181955.1| Heterosigma akashiwo chloroplast genes for 16S r...	157	5e-35
305	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	155	2e-34
306	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	155	2e-34
307	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	155	2e-34
308	dbj|AB181957.1| Heterosigma akashiwo chloroplast genes for 16S r...	155	2e-34
309	dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clon...	155	2e-34
310	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	153	7e-34
311	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	153	7e-34
312	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	153	7e-34
313	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	153	7e-34
314	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	153	7e-34
315	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	153	7e-34
316	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	153	7e-34
317	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	153	7e-34
318	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	153	7e-34
319	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	153	7e-34
320	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	153	7e-34
321	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	153	7e-34
322	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	153	7e-34
323	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	153	7e-34
324	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	153	7e-34
325	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	153	7e-34
326	gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA...	153	7e-34
327	gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA...	153	7e-34
328	gb|M19493.1|CPACYRGDG Cyanophora paradoxa 16S ribosomal RNA gene...	153	7e-34
329	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	153	7e-34
330	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	153	7e-34
331	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	153	7e-34
332	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	153	7e-34
333	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	153	7e-34
334	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	153	7e-34
335	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	153	7e-34
336	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	149	1e-32
337	gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal...	149	1e-32
338	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	149	1e-32
339	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	147	5e-32
340	gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RN...	145	2e-31
341	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	145	2e-31
342	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	145	2e-31
343	dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome	145	2e-31
344	gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11,...	145	2e-31
345	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	141	3e-30
346	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	139	1e-29
347	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	139	1e-29
348	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	139	1e-29
349	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	139	1e-29
350	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	139	1e-29
351	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	137	4e-29
352	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	137	4e-29
353	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	137	4e-29
354	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	137	4e-29
355	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	137	4e-29
356	gb|AF041468.1| Guillardia theta complete plastid genome	137	4e-29
357	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	135	2e-28
358	gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome	135	2e-28
359	gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial se...	135	2e-28
360	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	135	2e-28
361	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	131	3e-27
362	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	129	1e-26
363	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	129	1e-26
364	emb|AJ307978.1|PMO307978 Propionigenium modestum 23S rRNA gene, ...	129	1e-26
365	dbj|AK109086.1| Oryza sativa (japonica cultivar-group) cDNA clon...	129	1e-26
366	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	127	4e-26
367	dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone...	127	4e-26
368	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	125	2e-25
369	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	125	2e-25
370	dbj|AB013091.1| Clostridium histolyticum rrlC gene for 23S rRNA,...	125	2e-25
371	dbj|AB013090.1| Clostridium histolyticum rrlB gene for 23S rRNA,...	125	2e-25
372	dbj|AB013089.1| Clostridium histolyticum rrlA gene for 23S rRNA,...	125	2e-25
373	emb|AJ879839.1| Uncultured organism 23S rRNA gene, clone TC2-13	123	7e-25
374	emb|AJ879832.1| Uncultured organism 23S rRNA gene, clone LP4-1A	123	7e-25
375	dbj|AP006655.1| Lotus japonicus genomic DNA, chromosome 5, clone...	123	7e-25
376	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	121	3e-24
377	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	121	3e-24
378	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	121	3e-24
379	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	121	3e-24
380	gb|DQ313085.1| Uncultured bacterium clone 3R3H 23S ribosomal RNA...	121	3e-24
381	gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RN...	121	3e-24
382	gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RN...	121	3e-24
383	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	121	3e-24
384	emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome	121	3e-24
385	emb|AJ307977.1|ITA307977 Ilyobacter tartaricus 23S rRNA gene, DS...	119	1e-23
386	gb|AF192147.1|AF192147 Microtetraspora fusca 23S ribosomal RNA, ...	117	4e-23
387	gb|AF192139.1|AF192139 Microtetraspora niveoalba 23S ribosomal R...	117	4e-23
388	dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge...	117	4e-23
389	gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome	117	4e-23
390	dbj|AB045291.1| Clostridium perfringens rrnJ operon (16S rRNA, t...	117	4e-23
391	dbj|AB045290.1| Clostridium perfringens rrnI operon (16S rRNA, t...	117	4e-23
392	dbj|AB045289.1| Clostridium perfringens rrnH operon (16S rRNA, t...	117	4e-23
393	dbj|AB045288.1| Clostridium perfringens rrnG operon (16S rRNA, 2...	117	4e-23
394	dbj|AB045287.1| Clostridium perfringens rrnF operon (16S rRNA, 2...	117	4e-23
395	dbj|AB045286.1| Clostridium perfringens rrnE operon (16S rRNA, 2...	117	4e-23
396	dbj|AB045285.1| Clostridium perfringens rrnD operon (16S rRNA, 2...	117	4e-23
397	dbj|AB045284.1| Clostridium perfringens rrnC operon (16S rRNA, 2...	117	4e-23
398	dbj|AB045283.1| Clostridium perfringens rrnB operon (16S rRNA, 2...	117	4e-23
399	dbj|AB045282.1| Clostridium perfringens rrnA operon (16S rRNA, 2...	117	4e-23
400	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	115	2e-22
401	gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosoma...	115	2e-22
402	gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal ...	115	2e-22
403	gb|AY705483.1| Uncultured bacterium isolate ALT8 23S ribosomal R...	115	2e-22
404	emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, stra...	115	2e-22
405	emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, stra...	115	2e-22
406	gb|AE015927.1| Clostridium tetani E88, complete genome	115	2e-22
407	gb|AY793804.1| Uncultured organism clone SIMO1-M13F_E08 unknown ...	113	6e-22
408	emb|X68426.1|LD23SRRN L.delbrueckii gene for 23S rRNA	113	6e-22
409	gb|AF476104.1| Secondary endosymbiont of Dysmicoccus neobrevipes...	111	2e-21
410	dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co...	111	2e-21
411	gb|AF403181.1| Desulfitobacterium hafniense clone 3174 putative ...	111	2e-21
412	dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone...	111	2e-21
413	gb|M94260.1|CLORDGE Clostridium botulinum 23S ribosomal RNA	111	2e-21
414	gb|M94261.1|CLORDGC Clostridium botulinum type e 23S ribosomal RNA	111	2e-21
415	gb|M94259.1|CLORDGB Clostridium botulinum type b 23S ribosomal RNA	111	2e-21
416	gb|M94178.1|CLORDGA Clostridium botulinum type b 23S ribosomal RNA	111	2e-21
417	gb|CP000027.1| Dehalococcoides ethenogenes 195, complete genome	109	1e-20
418	gb|AE012979.1| Thermoanaerobacter tengcongensis MB4, section 6 o...	109	1e-20
419	gb|AE012982.1| Thermoanaerobacter tengcongensis MB4, section 9 o...	109	1e-20
420	emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome	109	1e-20
421	gb|AF192140.1|AF192140 Microbispora indica 23S ribosomal RNA, pa...	109	1e-20
422	dbj|AB109771.1| Finegoldia magna rrnC operon, complete sequence	109	1e-20
423	dbj|AB109770.1| Finegoldia magna rrnB operon (16S rRNA, 23S rRNA...	109	1e-20
424	dbj|AB109769.1| Finegoldia magna rrnA operon (16S rRNA, 23S rRNA...	109	1e-20
425	gb|AF116225.1|AF116225 Microbispora thermodiastatica 23S ribosom...	109	1e-20
426	gb|AF116224.1|AF116224 Microbispora rosea 23S ribosomal RNA, par...	109	1e-20
427	gb|AE000657.1| Aquifex aeolicus VF5, complete genome	109	1e-20
428	emb|AJ879838.1| Uncultured organism 23S rRNA gene, clone TC2-5	109	1e-20
429	gb|L08062.1|CLORGADG Clostridium tyrobutyricum 5S, 16S and 23S r...	109	1e-20
430	gb|AE006454.1| Lactococcus lactis subsp. lactis IL1403 section 2...	107	4e-20
431	gb|AE006421.1| Lactococcus lactis subsp. lactis IL1403 section 1...	107	4e-20
432	gb|AE006288.1| Lactococcus lactis subsp. lactis IL1403 section 5...	107	4e-20
433	emb|X06484.1|MLRN23S Micrococcus luteus 23S rRNA gene	107	4e-20
434	emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome	107	4e-20
435	gb|AC150251.1| Uncultured bacterium zdt-33i5 clone zdt-33i5, com...	107	4e-20
436	gb|DQ008806.1| Dioscorea sp. Qiu 94044 large subunit ribosomal R...	107	4e-20
437	emb|AJ295301.1|ECE295301 Enterococcus cecorum 23S rRNA gene, str...	107	4e-20
438	emb|X68435.1|LL23SRNA2 L.lactis (DSM 20481) gene for 23S rRNA	107	4e-20
439	emb|X68434.1|LL23SRNA1 L.lactis (DSM 20069) gene for 23S rRNA	107	4e-20
440	gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, ...	105	2e-19
441	gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome	105	2e-19
442	gb|AY281356.1| Uncultured Acidobacteria bacterium clone 41b15 ge...	105	2e-19
443	emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome...	105	2e-19
444	emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...	105	2e-19
445	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	105	2e-19
446	gb|AF163142.1|AF163142 Actinomadura spadix 23S ribosomal RNA gen...	105	2e-19
447	gb|AE013109.1| Thermoanaerobacter tengcongensis MB4, section 136...	103	6e-19
448	gb|DQ499016.1| Clavibacter michiganensis subsp. tessellarius 23S...	103	6e-19
449	gb|AE013169.1| Thermoanaerobacter tengcongensis MB4, section 196...	103	6e-19
450	gb|AF548142.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	103	6e-19
451	gb|AF548137.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	103	6e-19
452	gb|AF476105.1| Secondary endosymbiont of Erium globosum 16S ribo...	103	6e-19
453	gb|AF476103.1| Secondary endosymbiont of Dysmicoccus brevipes 16...	103	6e-19
454	gb|AF476101.1| Secondary endosymbiont of Antonina pretiosa 16S r...	103	6e-19
455	gb|DQ313079.1| Uncultured bacterium clone 3R2B 23S ribosomal RNA...	103	6e-19
456	gb|DQ312879.1| Uncultured bacterium clone 3K2H 23S ribosomal RNA...	103	6e-19
457	emb|AJ440238.1|ACT440238 Conexibacter woesei partial 23S rRNA ge...	103	6e-19
458	gb|AF263557.1| Secondary endosymbiont of Bactericera cockerelli ...	103	6e-19
459	emb|AJ307979.1|PMA307979 Propionigenium maris 23S rRNA gene, str...	103	6e-19
460	emb|AJ307976.1|IIN307976 Ilyobacter insuetus 23S rRNA gene, stra...	103	6e-19
461	emb|AJ307975.1|IPO307975 Ilyobacter polytropus 23S rRNA gene, DS...	103	6e-19
462	emb|AJ306887.1|HVE306887 Halomonas venusta partial 23S rRNA gene...	103	6e-19
463	emb|AJ306886.1|HVA306886 Halomonas variabilis partial 23S rRNA g...	103	6e-19
464	emb|AJ306883.1|HPA306883 Halomonas pantelleriensis partial 23S r...	103	6e-19
465	emb|AJ306879.1|HHA306879 Halomonas halmophila partial 23S rRNA g...	103	6e-19
466	emb|AJ306878.1|HEU306878 Halomonas eurihalina partial 23S rRNA g...	103	6e-19
467	emb|AJ306877.1|HEL306877 Halomonas elongata partial 23S rRNA gen...	103	6e-19
468	emb|AJ879811.1| Uncultured organism 23S rRNA gene, clone LP4-10	103	6e-19
469	gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge...	101	2e-18
470	gb|AY116904.1| Corynebacterium diphtheriae strain ATCC 11913 23S...	101	2e-18
471	gb|AE016828.2| Coxiella burnetii RSA 493, complete genome	101	2e-18
472	gb|AF476100.1| Secondary endosymbiont of Amonostherium lichtensi...	101	2e-18
473	gb|DQ312839.1| Uncultured bacterium clone 3J11H 23S ribosomal RN...	101	2e-18
474	gb|AF192150.1|AF192150 Streptosporangium claviforme 23S ribosoma...	101	2e-18
475	gb|AF192146.1|AF192146 Streptosporangium corrugatum 23S ribosoma...	101	2e-18
476	dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome	101	2e-18
477	dbj|AB109772.2| Finegoldia magna rrnD operon, complete sequence	101	2e-18
478	emb|AJ306882.1|HPA306882 Halomonas pacifica partial 23S rRNA gen...	101	2e-18
479	emb|AJ306876.1|HDE306876 Halomonas desiderata partial 23S rRNA g...	101	2e-18
480	emb|AJ306873.1|CSA306873 Chromohalobacter salexigens partial 23S...	101	2e-18
481	emb|AJ306871.1|CIS306871 Chromohalobacter israelensis partial 23...	101	2e-18
482	gb|AF116231.1|AF116231 Nonomuria salmonea 23S ribosomal RNA, par...	101	2e-18
483	gb|AF116227.1|AF116227 Nonomuria fastidiosa 23S ribosomal RNA, p...	101	2e-18
484	gb|AF116226.1|AF116226 Microbispora thermorosea 23S ribosomal RN...	101	2e-18
485	gb|AF116221.1|AF116221 Microbispora aerata 23S ribosomal RNA, pa...	101	2e-18
486	gb|AF079809.1|AF079809 Azotobacter vinelandii large subunit ribo...	101	2e-18
487	gb|U83912.1|MBU83912 Microbispora bispora ribosomal RNA operon D...	101	2e-18
488	gb|U83911.1|MBU83911 Microbispora bispora ribosomal RNA operon C...	101	2e-18
489	gb|U83909.1|MBU83909 Microbispora bispora ribosomal RNA operon A...	101	2e-18
490	gb|AY627718.1| Uncultured Frankia sp. clone CECO2012a 16S-23S in...	101	2e-18
491	emb|AJ295302.1|ECO295302 Enterococcus columbae 23S rRNA gene, st...	101	2e-18
492	emb|X87286.1|NE23S71TS N.exedens 23S rRNA gene	101	2e-18
493	gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, co...	100	9e-18
494	gb|AY033299.1| Uncultured alpha proteobacterium MB11B07 16S ribo...	100	9e-18
495	gb|AY705489.1| Uncultured bacterium isolate ALT13 23S ribosomal ...	100	9e-18
496	gb|AY379549.1| Thermus thermophilus TT700 23S ribosomal RNA, 5S ...	100	9e-18
497	gb|AY379548.1| Thermus thermophilus TT675 23S ribosomal RNA, 5S ...	100	9e-18
498	gb|AF385857.2| Cf. Francisella sp. CYH-2002 16S ribosomal RNA ge...	100	9e-18
499	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	100	9e-18
500	dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...	100	9e-18

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score = 1019 bits (514), Expect = 0.0
 Identities = 552/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 120001 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119946

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119945 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119886

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119885 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119827

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119826 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119767

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119766 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119707

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119706 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119647

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119646 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119587

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119586 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119527

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119526 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119467

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119466 taggcagtggcttggtta 119449



 Score = 1019 bits (514), Expect = 0.0
 Identities = 552/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 94893 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 94948

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94949 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95008

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95009 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95067

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95068 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95127

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95128 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95187

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95188 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95247

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95248 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95307

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95308 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95367

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95368 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95427

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95428 taggcagtggcttggtta 95445

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 118782 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 118727

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118726 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 118667

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118666 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 118608

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118607 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 118548

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118547 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 118488

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118487 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 118428

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118427 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 118368

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118367 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 118308

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118307 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 118248

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 118247 taggcagtggcttggtta 118230

---

>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence;
           chloroplast
          Length = 982

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 912 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 857

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 797

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 738

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 678

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 618

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 558

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 498

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 438

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 378

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 377 taggcagtggcttggtta 360

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 119866 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119811

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119810 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119751

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119750 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119692

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119691 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119632

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119631 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119572

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119571 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119512

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119511 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119452

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119451 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119392

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119331 taggcagtggcttggtta 119314



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 95290 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 95345

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95346 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95405

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95406 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95464

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95465 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95524

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95525 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95584

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95585 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95644

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95645 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95704

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95705 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95764

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95825 taggcagtggcttggtta 95842

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 119866 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119811

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119810 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119751

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119750 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119692

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119691 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119632

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119631 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119572

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119571 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119512

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119511 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119452

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119451 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119392

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119391 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119332

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119331 taggcagtggcttggtta 119314



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 95290 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 95345

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95346 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95405

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95406 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95464

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95465 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95524

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95525 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95584

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95585 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95644

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95645 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95704

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95705 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95764

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95765 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95824

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95825 taggcagtggcttggtta 95842

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 119815 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119760

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119759 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119700

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119699 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119641

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119640 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119581

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119580 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119521

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119520 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119461

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119460 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119401

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119400 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119341

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119281

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119280 taggcagtggcttggtta 119263



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 95235 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 95290

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95291 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95350

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95351 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95409

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95410 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95469

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95470 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95529

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95530 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95589

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95590 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95649

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95650 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95709

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95710 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95769

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95770 taggcagtggcttggtta 95787

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 31507868 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 31507923

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31507924 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 31507983

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31507984 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 31508042

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508043 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 31508102

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508103 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 31508162

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508163 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 31508222

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508223 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 31508282

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508283 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 31508342

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508343 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31508402

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 31508403 taggcagtggcttggtta 31508420

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 84728 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 84673

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84672 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 84613

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84612 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 84554

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84553 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 84494

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84493 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 84434

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84433 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 84374

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84373 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 84314

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84313 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 84254

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84253 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 84194

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 84193 taggcagtggcttggtta 84176

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 119835 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119780

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119779 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119720

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119719 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119661

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119660 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119601

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119600 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119541

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119540 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119481

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119480 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119421

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119420 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119361

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119360 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119301

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119300 taggcagtggcttggtta 119283



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 95283 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 95338

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95339 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95398

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95399 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95457

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95458 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95517

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95518 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95577

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95578 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95637

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95638 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95697

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95698 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95757

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95758 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95817

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95818 taggcagtggcttggtta 95835

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 122332 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 122387

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122388 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 122447

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122448 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 122506

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122507 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 122566

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122567 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 122626

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122627 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 122686

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122687 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 122746

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122747 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 122806

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122807 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 122866

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 122867 taggcagtggcttggtta 122884



 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 14057 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 14112

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14113 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 14172

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14173 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 14231

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14232 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 14291

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14292 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 14351

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 14352 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 14411

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14412 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 14471

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14472 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 14531

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14532 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 14591

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 14592 taggcagtggcttggtta 14609

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 44826 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 44771

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44770 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 44711

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44710 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 44652

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44651 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 44592

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44591 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 44532

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44531 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 44472

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44471 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 44412

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44411 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 44352

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44351 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 44292

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 44291 taggcagtggcttggtta 44274



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 20292 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 20347

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20348 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 20407

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20408 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 20466

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20467 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 20526

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20527 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 20586

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20587 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 20646

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20647 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 20706

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20707 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 20766

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20767 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 20826

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 20827 taggcagtggcttggtta 20844

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 58554 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 58499

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58498 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 58439

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58438 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 58380

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58379 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 58320

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58319 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 58260

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58259 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 58200

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58199 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 58140

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58139 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 58080

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58079 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 58020

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 58019 taggcagtggcttggtta 58002

---

>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence;
            tRNA-Ala (trnA) gene, complete sequence; hypothetical
            protein gene, complete cds; ACR pseudogene, complete
            sequence; tRNA-Ile (trnI) gene, partial sequence; and
            ORF72 pseudogene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 3026

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 1455 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 1400

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 1340

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1339 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 1281

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 1221

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 1161

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 1101

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 1041

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 981

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 980  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 921

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||||||||||
Sbjct: 920  taggcagtggcttggtta 903

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
               |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 9268217 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 9268272

                                                                           
Query: 61      cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268273 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9268332

                                                                           
Query: 121     cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
               ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268333 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9268391

                                                                           
Query: 181     ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268392 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9268451

                                                                           
Query: 241     ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268452 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9268511

                                                                           
Query: 301     agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268512 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9268571

                                                                           
Query: 361     ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268572 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9268631

                                                                           
Query: 421     ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268632 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9268691

                                                                           
Query: 481     cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268692 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9268751

                                 
Query: 541     taggcagtggcttggtta 558
               ||||||||||||||||||
Sbjct: 9268752 taggcagtggcttggtta 9268769



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
               |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 9227717 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 9227772

                                                                           
Query: 61      cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9227773 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9227832

                                                                           
Query: 121     cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
               ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9227833 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9227891

                                                                           
Query: 181     ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9227892 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9227951

                                                                           
Query: 241     ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9227952 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9228011

                                                                           
Query: 301     agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228012 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9228071

                                                                           
Query: 361     ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228072 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9228131

                                                                           
Query: 421     ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228132 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9228191

                                                                           
Query: 481     cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228192 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9228251

                                 
Query: 541     taggcagtggcttggtta 558
               ||||||||||||||||||
Sbjct: 9228252 taggcagtggcttggtta 9228269



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
               |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 9164306 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 9164361

                                                                           
Query: 61      cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164362 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9164421

                                                                           
Query: 121     cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
               ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164422 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9164480

                                                                           
Query: 181     ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164481 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9164540

                                                                           
Query: 241     ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164541 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9164600

                                                                           
Query: 301     agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164601 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9164660

                                                                           
Query: 361     ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164661 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9164720

                                                                           
Query: 421     ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164721 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9164780

                                                                           
Query: 481     cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164781 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9164840

                                 
Query: 541     taggcagtggcttggtta 558
               ||||||||||||||||||
Sbjct: 9164841 taggcagtggcttggtta 9164858



 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                           
Query: 1       aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
               |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 9056131 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 9056186

                                                                           
Query: 61      cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056187 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9056246

                                                                           
Query: 121     cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
               ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056247 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 9056305

                                                                           
Query: 181     ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056306 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9056365

                                                                           
Query: 241     ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056366 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9056425

                                                                           
Query: 301     agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9056426 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 9056485

                                                                           
Query: 361     ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056486 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9056545

                                                                           
Query: 421     ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056546 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9056605

                                                                           
Query: 481     cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056606 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 9056665

                                 
Query: 541     taggcagtggcttggtta 558
               ||||||||||||||||||
Sbjct: 9056666 taggcagtggcttggtta 9056683



 Score =  165 bits (83), Expect = 2e-37
 Identities = 101/107 (94%)
 Strand = Plus / Minus

                                                                            
Query: 387      ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
                |||||| |||||||||||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454

                                                               
Query: 447      gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
                |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 19938202 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 19938257

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938258 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19938317

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938318 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 19938376

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938377 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 19938436

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938437 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 19938496

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938497 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 19938556

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938557 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 19938616

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938617 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 19938676

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938677 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19938736

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 19938737 taggcagtggcttggtta 19938754



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 10277229 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 10277174

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10277173 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10277114

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10277113 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10277055

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10277054 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10276995

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276994 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10276935

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276934 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10276875

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276874 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10276815

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276814 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10276755

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276754 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10276695

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 10276694 taggcagtggcttggtta 10276677



 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 10387069 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 10387124

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10387184

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387185 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10387243

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10387303

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10387363

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387364 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10387423

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10387483

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387484 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10387543

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10387603

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 10387604 taggcagtggcttggtta 10387621



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Minus

                                              
Query: 405     agtaccgtgagggaaaggtgaaaagaacccc 435
               |||||||||||||||||||||||||||||||
Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 230     ttgtgctgctaggcgaagcggttgagtgc 258
               ||||||| ||||| |||||||||||||||
Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 31598384 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 31598439

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598440 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 31598499

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598500 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 31598558

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598559 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 31598618

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598619 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 31598678

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598679 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 31598738

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598739 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 31598798

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598799 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 31598858

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31598859 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 31598918

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 31598919 taggcagtggcttggtta 31598936

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 33525700 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 33525755

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33525756 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 33525815

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33525816 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 33525874

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33525875 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 33525934

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33525935 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 33525994

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33525995 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 33526054

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526055 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 33526114

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526115 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 33526174

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526175 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 33526234

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 33526235 taggcagtggcttggtta 33526252



 Score =  281 bits (142), Expect = 1e-72
 Identities = 148/150 (98%)
 Strand = Plus / Minus

                                                                            
Query: 409      ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 468
                |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042

                                                                            
Query: 469      tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 528
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982

                                              
Query: 529      gccggcgactcataggcagtggcttggtta 558
                ||||||||||||||||||||||||||||||
Sbjct: 16677981 gccggcgactcataggcagtggcttggtta 16677952



 Score =  194 bits (98), Expect = 2e-46
 Identities = 107/110 (97%)
 Strand = Plus / Minus

                                                                            
Query: 423      tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 482
                ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713

                                                                  
Query: 483      gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 532
                ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 389      tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
                |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                               
Query: 389      tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
                |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 416      ggaaaggtgaaaagaacccccagtgggtagtgaaataga 454
                |||||||||||||||||||| ||| ||||||||||||||
Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 47841 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 47786

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47785 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 47726

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47725 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 47667

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47666 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 47607

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47606 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 47547

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47546 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 47487

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47486 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 47427

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47426 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 47367

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47366 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 47307

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 47306 taggcagtggcttggtta 47289

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 70897 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 70952

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70953 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 71012

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71013 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 71071

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71072 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 71131

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71132 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 71191

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71192 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 71251

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71252 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 71311

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71312 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 71371

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71372 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 71431

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 71432 taggcagtggcttggtta 71449



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 389   tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
             |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 389   tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
             |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 123665 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 123610

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123609 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123550

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123549 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123491

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123490 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 123431

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123430 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 123371

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123370 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 123311

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123310 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123251

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123250 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123191

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123190 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123131

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 123130 taggcagtggcttggtta 123113



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 99172 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 99227

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99228 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99287

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99288 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 99346

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99347 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 99406

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99407 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 99466

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99467 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 99526

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99527 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 99586

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99587 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 99646

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99647 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99706

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 99707 taggcagtggcttggtta 99724

---

>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full
           insert sequence
          Length = 1684

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 69  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 124

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 303

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 363

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 483

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 543

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 603

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 604 taggcagtggcttggtta 621

---

>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full
           insert sequence
          Length = 1395

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 66  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 121

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 181

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 240

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 300

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 360

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 420

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 480

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 540

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 600

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 601 taggcagtggcttggtta 618

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 19949478 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 19949533

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949534 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19949593

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949594 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 19949652

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949653 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 19949712

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949713 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 19949772

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949773 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 19949832

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949833 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 19949892

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949893 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 19949952

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19949953 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 19950012

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 19950013 taggcagtggcttggtta 19950030



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 10283268 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 10283213

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10283212 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10283153

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10283152 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10283094

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10283093 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10283034

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10283033 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10282974

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282973 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10282914

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282913 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10282854

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282853 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10282794

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282793 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10282734

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 10282733 taggcagtggcttggtta 10282716



 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 10393108 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 10393163

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393164 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 10393223

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393224 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 10393282

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393283 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 10393342

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393343 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 10393402

                                                                            
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393403 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 10393462

                                                                            
Query: 361      ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393463 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 10393522

                                                                            
Query: 421      ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393523 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 10393582

                                                                            
Query: 481      cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393583 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 10393642

                                  
Query: 541      taggcagtggcttggtta 558
                ||||||||||||||||||
Sbjct: 10393643 taggcagtggcttggtta 10393660



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                              
Query: 389     tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
               |||||||||||  |  |||||||||||||||||||||||||||||||
Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 230     ttgtgctgctaggcgaagcggttgagtgc 258
               ||||||| ||||| |||||||||||||||
Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 124382 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 124327

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124326 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 124267

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124266 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 124208

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124207 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 124148

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124147 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 124088

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124087 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 124028

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124027 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123968

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123967 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123908

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123907 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123848

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 123847 taggcagtggcttggtta 123830



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 99849  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 99904

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99905  cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99964

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99965  cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 100023

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100024 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 100083

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100084 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 100143

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100144 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 100203

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100204 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 100263

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100264 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 100323

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100324 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 100383

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 100384 taggcagtggcttggtta 100401

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 119809 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 119754

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119753 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119694

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119693 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 119635

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119634 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 119575

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119574 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 119515

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119514 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 119455

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119454 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 119395

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119394 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 119335

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119334 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 119275

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 119274 taggcagtggcttggtta 119257



 Score = 1011 bits (510), Expect = 0.0
 Identities = 551/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 95230 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 95285

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95286 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 95345

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95346 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 95404

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95405 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 95464

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95465 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 95524

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95525 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 95584

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95585 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 95644

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95645 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 95704

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95705 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 95764

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 95765 taggcagtggcttggtta 95782

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 140865 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 140920

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140921 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 140980

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140981 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 141039

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141040 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 141099

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141100 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 141159

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 141160 agcttacgctctgacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaagga 141219

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141220 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 141279

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141280 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 141339

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141340 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141399

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 141400 taggcagtggcttggtta 141417

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 93461 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 93516

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93517 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 93576

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93577 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 93635

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93636 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 93695

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93696 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 93755

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93756 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 93815

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93816 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 93875

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93876 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 93935

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93936 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 93995

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 93996 taggcagtggcttggtta 94013

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score = 1003 bits (506), Expect = 0.0
 Identities = 550/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 27525 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 27580

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27581 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 27640

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27641 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 27699

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27700 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 27759

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27760 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 27819

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27820 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 27879

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27880 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 27939

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27940 ggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 27999

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28000 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 28059

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 28060 taggcagtggcttggtta 28077

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  995 bits (502), Expect = 0.0
 Identities = 549/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                           
Query: 1       aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
               |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 9242064 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 9242009

                                                                           
Query: 61      cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
               ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9242008 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 9241949

                                                                           
Query: 121     cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
               ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9241948 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatg 9241890

                                                                           
Query: 181     ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241889 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 9241830

                                                                           
Query: 241     ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241829 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 9241770

                                                                           
Query: 301     agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241769 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 9241710

                                                                           
Query: 361     ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241709 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 9241650

                                                                           
Query: 421     ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241649 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 9241590

                                                                           
Query: 481     cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
               |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9241589 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 9241530

                                 
Query: 541     taggcagtggcttggtta 558
               ||||||||||||||||||
Sbjct: 9241529 taggcagtggcttggtta 9241512



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 34/35 (97%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                   
Query: 111      actgaaacatcttagtagccagaggnaaaagaaag 145
                ||||||||||||||||||||||||| |||||||||
Sbjct: 10177929 actgaaacatcttagtagccagagg-aaaagaaag 10177896

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  995 bits (502), Expect = 0.0
 Identities = 549/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 53277 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 53222

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53221 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 53162

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 53161 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatg 53103

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53102 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 53043

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53042 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 52983

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52982 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 52923

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52922 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 52863

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52862 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 52803

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 52802 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactca 52743

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 52742 taggcagtggcttggtta 52725

---

>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full
           insert sequence
          Length = 3614

 Score =  995 bits (502), Expect = 0.0
 Identities = 549/558 (98%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 26  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 81

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82  cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 141

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 200

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ggagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgttgtgctgcta 260

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 320

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 380

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 440

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 500

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 560

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 561 taggcagtggcttggtta 578

---

>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full
           insert sequence
          Length = 1223

 Score =  991 bits (500), Expect = 0.0
 Identities = 513/516 (99%), Gaps = 1/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 14  attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 73

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 74  cctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgattcccgta 132

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 192

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 252

                                                                       
Query: 283 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 253 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 312

                                                                       
Query: 343 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 372

                                                                       
Query: 403 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 432

                                                                       
Query: 463 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 492

                                               
Query: 523 gaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||
Sbjct: 493 gaatgagccggcgactcataggcagtggcttggtta 528

---

>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full
           insert sequence
          Length = 1822

 Score =  983 bits (496), Expect = 0.0
 Identities = 512/516 (99%), Gaps = 1/516 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10  attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 69

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 70  cctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgattcccgta 128

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 188

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 248

                                                                       
Query: 283 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 249 gtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacgtggaatcc 308

                                                                       
Query: 343 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 368

                                                                       
Query: 403 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 462
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 428

                                                                       
Query: 463 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 522
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 488

                                               
Query: 523 gaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaatgagccggcgactcataggcagtggcttggtta 524

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  963 bits (486), Expect = 0.0
 Identities = 546/558 (97%), Gaps = 6/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 123604 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 123549

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123548 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123489

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123488 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123430

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 123429 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 123370

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 123369 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 123310

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123309 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 123251

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123250 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 123191

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123190 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 123131

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123130 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 123071

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 123070 taggcagtggcttggtta 123053



 Score =  963 bits (486), Expect = 0.0
 Identities = 546/558 (97%), Gaps = 6/558 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 99133 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 99188

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99189 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 99248

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99249 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 99307

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 99308 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 99367

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 99368 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 99427

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99428 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 99486

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99487 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 99546

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99547 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 99606

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99607 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 99666

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 99667 taggcagtggcttggtta 99684

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  963 bits (486), Expect = 0.0
 Identities = 546/558 (97%), Gaps = 6/558 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 5486 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 5541

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5542 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 5601

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5602 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 5660

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5661 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 5720

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 5721 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 5780

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5781 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 5839

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5840 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 5899

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5900 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 5959

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5960 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 6019

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||||||||||
Sbjct: 6020 taggcagtggcttggtta 6037

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  963 bits (486), Expect = 0.0
 Identities = 546/558 (97%), Gaps = 6/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 74  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 129

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cttttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacat 189

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 248

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 249 ggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgcta 308

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 309 ggcgaagcggttgagtgccgcaccctagatggctatagtccagtagccgatagcatcact 368

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 -gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 427

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 487

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 547

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 607

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 608 taggcagtggcttggtta 625

---

>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full
           insert sequence
          Length = 1872

 Score =  950 bits (479), Expect = 0.0
 Identities = 489/491 (99%), Gaps = 1/491 (0%)
 Strand = Plus / Plus

                                                                       
Query: 67  aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60

                                                                       
Query: 127 agccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 186
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagca 119

                                                                       
Query: 187 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa 179

                                                                       
Query: 247 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 239

                                                                       
Query: 307 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 366
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 cgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 299

                                                                       
Query: 367 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 359

                                                                       
Query: 427 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 419

                                                                       
Query: 487 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 479

                      
Query: 547 gtggcttggtt 557
           |||||||||||
Sbjct: 480 gtggcttggtt 490

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 139515 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 139460

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 139459 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 139401

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139400 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139342

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 139341 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 139282

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||| | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 139281 ggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcact 139222

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139221 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139162

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139161 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 139102

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 139101 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 139045

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139044 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 138985

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 138984 taggcagtggcttggtta 138967



 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 110430 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 110485

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 110486 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 110544

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110545 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 110603

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 110604 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 110663

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||| | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 110664 ggcgaagcggtggagtactgcaccctagatggcgagagtccagtagccgaaagcatcact 110723

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110724 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110783

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110784 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 110843

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 110844 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 110900

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110901 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 110960

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 110961 taggcagtggcttggtta 110978

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 127793 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 127738

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 127737 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 127679

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 127678 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 127620

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 127619 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgcta 127560

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||||| |||||||||||||| | |||||||||||||||| |||||||
Sbjct: 127559 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcact 127500

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127499 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 127440

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127439 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 127380

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 127379 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 127323

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127322 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 127263

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 127262 taggcagtggcttggtta 127245



 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 107129 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 107184

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 107185 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 107243

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 107244 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 107302

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 107303 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgcta 107362

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||||| |||||||||||||| | |||||||||||||||| |||||||
Sbjct: 107363 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaaacatcact 107422

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107423 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 107482

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107483 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 107542

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 107543 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 107599

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107600 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 107659

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 107660 taggcagtggcttggtta 107677

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 134152 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 134097

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 134096 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 134038

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134037 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 133979

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 133978 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 133919

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 133918 ggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 133859

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133858 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 133799

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133798 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 133739

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 133738 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 133682

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133681 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 133622

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 133621 taggcagtggcttggtta 133604



 Score =  833 bits (420), Expect = 0.0
 Identities = 530/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 103819 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 103874

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103875 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 103933

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103934 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 103992

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 103993 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104052

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 104053 ggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 104112

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104113 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104172

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104173 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 104232

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 104233 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104289

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104290 cagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 104349

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 104350 taggcagtggcttggtta 104367

---

>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full
           insert sequence
          Length = 1462

 Score =  821 bits (414), Expect = 0.0
 Identities = 417/418 (99%)
 Strand = Plus / Plus

                                                                       
Query: 141 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 200
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60

                                                                       
Query: 201 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120

                                                                       
Query: 261 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 320
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180

                                                                       
Query: 321 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 380
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240

                                                                       
Query: 381 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300

                                                                       
Query: 441 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 418

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  817 bits (412), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||| |||||||
Sbjct: 142037 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatgggtcaac 141982

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 141981 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 141923

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141922 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 141864

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 141863 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 141804

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||||||||||| | |||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 141803 ggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcact 141744

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141743 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 141684

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141683 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 141624

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 141623 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 141567

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141566 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 141507

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 141506 taggcagtggcttggtta 141489



 Score =  817 bits (412), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||| |||||||
Sbjct: 111620 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatgggtcaac 111675

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 111676 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 111734

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111735 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 111793

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 111794 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 111853

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||||||||||| | |||||||||||||| | ||||||||| ||||||||||||||
Sbjct: 111854 ggcgaagcggttgagtactgcaccctagatggcgagagtccagtaaccgaaagcatcact 111913

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
               ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111914 ggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 111973

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111974 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 112033

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 112034 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 112090

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112091 cagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 112150

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 112151 taggcagtggcttggtta 112168

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
           insert sequence
          Length = 2390

 Score =  817 bits (412), Expect = 0.0
 Identities = 415/416 (99%)
 Strand = Plus / Plus

                                                                       
Query: 143 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60

                                                                       
Query: 203 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120

                                                                       
Query: 263 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 322
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180

                                                                       
Query: 323 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240

                                                                       
Query: 383 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300

                                                                       
Query: 443 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 416

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
           insert sequence
          Length = 1896

 Score =  817 bits (412), Expect = 0.0
 Identities = 415/416 (99%)
 Strand = Plus / Plus

                                                                       
Query: 143 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60

                                                                       
Query: 203 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120

                                                                       
Query: 263 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 322
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180

                                                                       
Query: 323 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240

                                                                       
Query: 383 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300

                                                                       
Query: 443 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 502
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 416

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  815 bits (411), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 13/558 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 134910 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 134855

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 134854 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 134796

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134795 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 134737

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 134736 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 134677

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134676 ggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcact 134617

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134616 agcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 134557

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134556 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 134497

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 134496 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 134440

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||    ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134439 cagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactca 134384

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 134383 taggcagtggcttggtta 134366



 Score =  815 bits (411), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 13/558 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 105372 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 105427

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105428 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105486

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105487 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105545

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105546 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105605

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 105606 ggcgaagcagtggagtgctgcaccctagatggctagagtccagtagccgaaagcatcact 105665

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105666 agcttacgttctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 105725

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105726 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 105785

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   ||||||||||||
Sbjct: 105786 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---tgagctcccaag 105842

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||    ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105843 cagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatgagccggcgactca 105898

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 105899 taggcagtggcttggtta 105916

---

>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full
           insert sequence
          Length = 1463

 Score =  815 bits (411), Expect = 0.0
 Identities = 414/415 (99%)
 Strand = Plus / Plus

                                                                       
Query: 144 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60

                                                                       
Query: 204 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120

                                                                       
Query: 264 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 323
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180

                                                                       
Query: 324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240

                                                                       
Query: 384 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300

                                                                       
Query: 444 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 415

---

>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full
           insert sequence
          Length = 1109

 Score =  815 bits (411), Expect = 0.0
 Identities = 414/415 (99%)
 Strand = Plus / Plus

                                                                       
Query: 144 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63

                                                                       
Query: 204 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123

                                                                       
Query: 264 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 323
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183

                                                                       
Query: 324 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243

                                                                       
Query: 384 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303

                                                                       
Query: 444 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 503
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 418

---

>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full
           insert sequence
          Length = 1517

 Score =  811 bits (409), Expect = 0.0
 Identities = 412/413 (99%)
 Strand = Plus / Plus

                                                                       
Query: 146 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60

                                                                       
Query: 206 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120

                                                                       
Query: 266 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 325
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180

                                                                       
Query: 326 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240

                                                                       
Query: 386 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 445
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300

                                                                       
Query: 446 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360

                                                                
Query: 506 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 413

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  811 bits (409), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 11/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 136520 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 136465

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 136464 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 136406

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136405 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136347

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 136287

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 136286 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 136227

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136226 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 136167

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 136166 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 136107

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 136106 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 136050

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |  || |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 136049 cagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 135992

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 135991 taggcagtggcttggtta 135974



 Score =  811 bits (409), Expect = 0.0
 Identities = 528/558 (94%), Gaps = 11/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 105905 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 105960

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105961 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106019

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106020 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106078

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106079 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106138

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 106139 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 106198

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106199 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106258

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 106259 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 106318

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 106319 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 106375

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |  || |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 106376 cagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 106433

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 106434 taggcagtggcttggtta 106451

---

>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full
           insert sequence
          Length = 1055

 Score =  801 bits (404), Expect = 0.0
 Identities = 445/452 (98%), Gaps = 5/452 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 70  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 125

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 185

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 304

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 364

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484

                                           
Query: 421 ggtgaaaagaacccccagtgggtagtgaaata 452
           ||||||||||||||||||||||||||||||||
Sbjct: 485 ggtgaaaagaacccccagtgggtagtgaaata 516

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 132704 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 132649

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 132648 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 132590

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132589 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132531

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132530 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 132471

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132470 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 132411

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132410 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132351

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 132350 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132291

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 132290 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132234

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 132233 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132175

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 132174 taggcagtggcttggtta 132157



 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 104174 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 104229

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104230 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 104288

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104289 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104347

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 104348 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104407

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 104408 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 104467

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104468 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104527

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 104528 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104587

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 104588 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104644

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 104645 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104703

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 104704 taggcagtggcttggtta 104721

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| ||||||| |||
Sbjct: 132927 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggttaac 132872

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 132871 cttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 132813

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132812 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132754

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 132753 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 132694

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 132693 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 132634

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132633 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132574

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 132573 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132514

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 132513 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132457

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |    ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 132456 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132398

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 132397 taggcagtggcttggtta 132380



 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| ||||||| |||
Sbjct: 103837 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggttaac 103892

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103893 cttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 103951

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103952 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104010

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 104011 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 104070

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 104071 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 104130

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104131 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104190

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 104191 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104250

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 104251 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104307

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |    ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 104308 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104366

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 104367 taggcagtggcttggtta 104384

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 132697 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 132642

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 132641 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 132583

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132582 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 132524

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132523 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 132464

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132463 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 132404

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132403 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 132344

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 132343 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 132284

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 132283 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 132227

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 132226 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 132168

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 132167 taggcagtggcttggtta 132150



 Score =  793 bits (400), Expect = 0.0
 Identities = 526/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 104172 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 104227

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104228 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 104286

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104287 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104345

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 104346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 104405

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 104406 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 104465

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104466 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 104525

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 104526 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 104585

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 104586 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 104642

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 104643 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 104701

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 104702 taggcagtggcttggtta 104719

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  785 bits (396), Expect = 0.0
 Identities = 525/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 131596 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 131541

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 131540 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 131482

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131481 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 131423

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131422 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 131363

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131362 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 131303

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131302 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 131243

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 131242 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 131183

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 131182 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 131126

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 131125 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 131067

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 131066 taggcagtggcttggtta 131049



 Score =  785 bits (396), Expect = 0.0
 Identities = 525/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 103039 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggttaac 103094

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103095 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 103153

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103154 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 103212

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 103213 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 103272

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 103273 ggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcact 103332

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103333 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 103392

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 103393 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 103452

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 103453 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 103509

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 103510 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 103568

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 103569 taggcagtggcttggtta 103586

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  785 bits (396), Expect = 0.0
 Identities = 525/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| ||||||| |||
Sbjct: 133888 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggttaac 133833

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 133832 cttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 133774

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133773 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 133715

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 133714 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 133655

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 133654 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 133595

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133594 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 133535

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 133534 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 133475

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 133474 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 133418

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |    ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 133417 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 133359

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 133358 taggcagtggcttggtta 133341



 Score =  785 bits (396), Expect = 0.0
 Identities = 525/558 (94%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| ||||||| |||
Sbjct: 104761 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggttaac 104816

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104817 cttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 104875

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104876 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 104934

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 104935 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 104994

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 104995 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 105054

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105055 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 105114

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 105115 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 105174

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 105175 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 105231

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |    ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 105232 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 105290

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 105291 taggcagtggcttggtta 105308

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  777 bits (392), Expect = 0.0
 Identities = 524/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 140289 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 140234

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 140233 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 140175

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140174 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 140116

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 140115 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 140056

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||  || ||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 140055 ggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 139996

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139995 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139936

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 139935 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 139876

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | || |||||||
Sbjct: 139875 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaag 139819

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| | | | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 139818 cagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 139760

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 139759 taggcagtggcttggtta 139742



 Score =  777 bits (392), Expect = 0.0
 Identities = 524/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 109771 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 109826

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 109827 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 109885

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109886 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109944

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 109945 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 110004

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||  || ||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 110005 ggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact 110064

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110065 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110124

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 110125 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 110184

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | || |||||||
Sbjct: 110185 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagttcccaag 110241

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| | | | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 110242 cagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactca 110300

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 110301 taggcagtggcttggtta 110318

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  777 bits (392), Expect = 0.0
 Identities = 524/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| ||||||| |||
Sbjct: 70  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggttaac 125

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 126 cttttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 184

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgcta 303

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct: 304 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgagagcatcact 363

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 423

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 424 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 483

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 484 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 540

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| |    ||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactca 599

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 600 taggcagtggcttggtta 617

---

>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2873

 Score =  777 bits (392), Expect = 0.0
 Identities = 524/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||||| || |||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 313 ggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 549

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactca 608

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||||||||||
Sbjct: 609 taggcagtggcttggtta 626

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  777 bits (392), Expect = 0.0
 Identities = 524/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| ||||||  | |||||| |||||| ||||
Sbjct: 135958 aatgcttcgggg-agttgaaaataagcatag-atccgg--ggattcccgaatagggcaac 135903

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135902 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135844

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135843 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135785

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135784 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135725

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135724 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135665

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135664 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135605

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135604 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135545

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135544 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135488

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135487 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135430

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 135429 ataggcagtggcttggtta 135411



 Score =  777 bits (392), Expect = 0.0
 Identities = 524/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| ||||||  | |||||| |||||| ||||
Sbjct: 106180 aatgcttcgggg-agttgaaaataagcatag-atccgg--ggattcccgaatagggcaac 106235

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106236 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106294

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106295 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106353

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106354 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106413

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 106414 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106473

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106474 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106533

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106534 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106593

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106594 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106650

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106651 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106708

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106709 ataggcagtggcttggtta 106727

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 136229 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 136174

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 136173 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 136115

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136114 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136056

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136055 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135996

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135995 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135936

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135935 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135876

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135875 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135816

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135815 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135759

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135758 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135701

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 135700 ataggcagtggcttggtta 135682



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 106401 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 106456

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106457 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106515

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106516 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106574

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106575 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106634

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 106635 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106694

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106695 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106754

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106755 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106814

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106815 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106871

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106872 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106929

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106930 ataggcagtggcttggtta 106948

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 136867 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 136812

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 136811 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 136753

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136752 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136694

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136693 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 136634

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 136633 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 136574

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136573 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 136514

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136513 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 136454

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 136453 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 136397

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 136396 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 136339

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 136338 ataggcagtggcttggtta 136320



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 106690 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 106745

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106746 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106804

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106805 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106863

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106864 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106923

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 106924 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106983

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106984 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 107043

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107044 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 107103

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 107104 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 107160

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 107161 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 107218

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 107219 ataggcagtggcttggtta 107237

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 1595 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 1650

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1651 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 1709

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 1768

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1769 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 1828

                                                                        
Query: 241  ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
            |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 1829 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 1888

                                                                        
Query: 300  tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 1948

                                                                        
Query: 360  accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1949 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 2008

                                                                        
Query: 420  aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
             |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 2009 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 2065

                                                                        
Query: 480  gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
            ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 2123

                               
Query: 540  ataggcagtggcttggtta 558
            |||||||||||||||||||
Sbjct: 2124 ataggcagtggcttggtta 2142

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 135475 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 135420

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135419 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135361

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135360 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135302

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135301 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135242

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135241 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135182

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135181 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135122

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135121 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135062

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135061 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135005

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135004 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134947

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 134946 ataggcagtggcttggtta 134928



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 105561 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 105616

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105617 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105675

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105676 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105734

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105735 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105794

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 105795 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105854

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105855 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105914

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105915 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105974

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 105975 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106031

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106032 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106089

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106090 ataggcagtggcttggtta 106108

---

>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full
           insert sequence
          Length = 1707

 Score =  773 bits (390), Expect = 0.0
 Identities = 403/406 (99%), Gaps = 1/406 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 22  attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 81

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 82  cctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgattcccgta 140

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 200

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 260

                                                                       
Query: 283 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 320

                                                                       
Query: 343 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 380

                                                         
Query: 403 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 448
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 426

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 135610 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 135555

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135554 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135496

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135495 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135437

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135436 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135377

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135376 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135317

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135316 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135257

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135256 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135197

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135196 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135140

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135139 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135082

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 135081 ataggcagtggcttggtta 135063



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 105733 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 105788

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105789 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105847

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105848 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105906

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105907 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105966

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 105967 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106026

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106027 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106086

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106087 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106146

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106147 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106203

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106204 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106261

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106262 ataggcagtggcttggtta 106280

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 135608 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 135553

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135552 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135494

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135493 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135435

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135434 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135375

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135374 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135315

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135314 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135255

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135254 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135195

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135194 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135138

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135137 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135080

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 135079 ataggcagtggcttggtta 135061



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 105730 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 105785

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105786 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105844

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105845 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105903

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105904 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105963

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 105964 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106023

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106024 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106083

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106084 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106143

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106144 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106200

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106201 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106258

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106259 ataggcagtggcttggtta 106277

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 135520 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 135465

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135464 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135406

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135405 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135347

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135346 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135287

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135286 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135227

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135226 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135167

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135166 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135107

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135106 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135050

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135049 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 134992

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 134991 ataggcagtggcttggtta 134973



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 105608 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 105663

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105664 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105722

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105723 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105781

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105782 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105841

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 105842 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105901

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105902 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105961

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105962 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106021

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106022 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106078

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106079 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106136

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106137 ataggcagtggcttggtta 106155

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 136227 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 136172

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 136171 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 136113

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136112 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 136054

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 136053 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135994

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135993 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135934

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135933 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135874

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135873 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135814

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135813 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135757

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 135756 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 135699

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 135698 ataggcagtggcttggtta 135680



 Score =  773 bits (390), Expect = 0.0
 Identities = 525/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 106399 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 106454

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106455 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106513

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106514 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106572

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106573 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106632

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 106633 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 106692

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106693 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 106752

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106753 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 106812

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 106813 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106869

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 106870 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 106927

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106928 ataggcagtggcttggtta 106946

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  765 bits (386), Expect = 0.0
 Identities = 524/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 135487 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 135432

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135431 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135373

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135372 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135314

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135313 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135254

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 135253 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 135194

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135193 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 135134

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135133 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 135074

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 135073 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 135017

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||| 
Sbjct: 135016 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgacta 134959

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 134958 ataggcagtggcttggtta 134940



 Score =  765 bits (386), Expect = 0.0
 Identities = 524/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 105575 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 105630

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105631 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 105689

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105690 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 105748

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 105749 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 105808

                                                                          
Query: 241    ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |  ||| ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 105809 ggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 105868

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105869 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 105928

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105929 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 105988

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 105989 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 106045

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||| 
Sbjct: 106046 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgacta 106103

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 106104 ataggcagtggcttggtta 106122

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  761 bits (384), Expect = 0.0
 Identities = 522/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||| |||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 106076 aatgcttcgggg-agttgcaaataagcgtag-atccgg-ag-attcccgaataggtcaac 106131

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106132 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106190

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106191 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106249

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106250 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106309

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || |||||  |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 106310 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 106369

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106370 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106429

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 106430 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 106489

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||| |||||
Sbjct: 106490 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 106546

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| | | | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 106547 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106605

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 106606 taggcagtggcttggtta 106623



 Score =  712 bits (359), Expect = 0.0
 Identities = 521/561 (92%), Gaps = 13/561 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||| |||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 135833 aatgcttcgggg-agttgcaaataagcgtag-atccgg-ag-attcccgaataggtcaac 135778

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135777 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135719

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135718 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135660

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaa-tacaagcgttgtgctgct 239
              ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 135659 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgct 135600

                                                                          
Query: 240    aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              ||||||||| || |||||  |||||||||||||| | |||||||||||||||||||||||
Sbjct: 135599 aggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcac 135540

                                                                          
Query: 300    tagcttatgctc-tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc-aa 357
              ||||||| || | |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 135539 tagcttacgcccctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaa 135480

                                                                          
Query: 358    ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 135479 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 135420

                                                                          
Query: 418    aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477
              || |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||| ||
Sbjct: 135419 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttcc 135363

                                                                          
Query: 478    aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537
              ||||||||||||| | | | |  |||||||||||||||||||||||||||||||||||||
Sbjct: 135362 aagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgac 135304

                                   
Query: 538    tcataggcagtggcttggtta 558
              |||||||||||||||||||||
Sbjct: 135303 tcataggcagtggcttggtta 135283

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  761 bits (384), Expect = 0.0
 Identities = 522/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||||||||||||| || |||||| || |||||| |||||||||||
Sbjct: 131720 aatgcttcgggg-agttgaaaataagcagag-atccgg-ag-attcccgaataggtcaac 131665

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 131664 ctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 131606

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131605 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 131547

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 131546 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 131487

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||| | || |||||| | |||||||||||  ||||||||||||||||||||||||||
Sbjct: 131486 ggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcact 131427

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131426 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 131367

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 131366 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 131307

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||| ||||
Sbjct: 131306 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 131250

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||||| |   || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 131249 cagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 131191

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 131190 taggcagtggcttggtta 131173



 Score =  761 bits (384), Expect = 0.0
 Identities = 522/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||||||||||||| || |||||| || |||||| |||||||||||
Sbjct: 101725 aatgcttcgggg-agttgaaaataagcagag-atccgg-ag-attcccgaataggtcaac 101780

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 101781 ctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 101839

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101840 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 101898

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 101899 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 101958

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||| | || |||||| | |||||||||||  ||||||||||||||||||||||||||
Sbjct: 101959 ggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcact 102018

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102019 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 102078

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 102079 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 102138

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||| ||||
Sbjct: 102139 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 102195

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||||| |   || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 102196 cagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactca 102254

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 102255 taggcagtggcttggtta 102272

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  761 bits (384), Expect = 0.0
 Identities = 522/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||| |||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 136109 aatgcttcgggg-agttgcaaataagcgtag-atccgg-ag-attcccgaataggtcaac 136054

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 136053 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 135995

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135994 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 135936

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135935 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 135876

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || |||||  |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 135875 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 135816

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135815 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 135756

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 135755 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 135696

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||| |||||
Sbjct: 135695 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 135639

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| | | | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 135638 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 135580

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 135579 taggcagtggcttggtta 135562



 Score =  761 bits (384), Expect = 0.0
 Identities = 522/558 (93%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||| |||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 106298 aatgcttcgggg-agttgcaaataagcgtag-atccgg-ag-attcccgaataggtcaac 106353

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 106354 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 106412

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106413 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 106471

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106472 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 106531

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| || |||||  |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 106532 ggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagccgaaagcatcact 106591

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106592 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 106651

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 106652 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 106711

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||| |||||
Sbjct: 106712 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 106768

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| | | | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 106769 cagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactca 106827

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||||||||||
Sbjct: 106828 taggcagtggcttggtta 106845

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  755 bits (381), Expect = 0.0
 Identities = 523/559 (93%), Gaps = 11/559 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 71  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 126

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| ||||||||||||||||||  |||||||||||||
Sbjct: 127 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacat 185

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaat 179
           ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 186 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaat 244

                                                                       
Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 245 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 304

                                                                       
Query: 240 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
           ||||||||||||  ||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 305 aggcgaagcggtgaagtgccgaaccctagatggctagagtccagtagccgaaagcatcac 364

                                                                       
Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 424

                                                                       
Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 425 accaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 484

                                                                       
Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
            |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 485 gggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccg---taagctcccaa 541

                                                                       
Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
           ||||||||||| |   | |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactc 600

                              
Query: 540 ataggcagtggcttggtta 558
           |||||||||||||||||||
Sbjct: 601 ataggcagtggcttggtta 619

---

>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence
          Length = 838

 Score =  749 bits (378), Expect = 0.0
 Identities = 523/559 (93%), Gaps = 13/559 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 46  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 101

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 102 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 160

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 219

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 220 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 279

                                                                       
Query: 241 ggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
           |||||||| |  ||| ||| |||||| | ||||| |||||||||||||||||||||||||
Sbjct: 280 ggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagtagccgaaagcatcac 338

                                                                       
Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 398

                                                                       
Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 458

                                                                       
Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
            |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 459 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 515

                                                                       
Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
           ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 573

                              
Query: 540 ataggcagtggcttggtta 558
           |||||||||||||||||||
Sbjct: 574 ataggcagtggcttggtta 592

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  741 bits (374), Expect = 0.0
 Identities = 521/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 139433 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 139378

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 139377 ctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacat 139319

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139318 cttagtagccggagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139260

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 139259 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 139200

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||||||  ||||||| |||||||||||| | ||||||||||||||||||||||||
Sbjct: 139199 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 139140

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139139 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 139080

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 139079 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 139020

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||   ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 139019 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 138963

                                                                          
Query: 481    cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              |||||||||| |   || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 138962 cagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 138905

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 138904 ataggcagtggcttggtta 138886



 Score =  741 bits (374), Expect = 0.0
 Identities = 521/559 (93%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 109664 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 109719

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 109720 ctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacat 109778

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109779 cttagtagccggagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109837

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 109838 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 109897

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||||||  ||||||| |||||||||||| | ||||||||||||||||||||||||
Sbjct: 109898 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 109957

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109958 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 110017

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 110018 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 110077

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              ||||||||||||||||   ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 110078 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 110134

                                                                          
Query: 481    cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              |||||||||| |   || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 110135 cagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 110192

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 110193 ataggcagtggcttggtta 110211

---

>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001
          Length = 501

 Score =  741 bits (374), Expect = 0.0
 Identities = 462/487 (94%), Gaps = 7/487 (1%)
 Strand = Plus / Plus

                                                                       
Query: 73  ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17  ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76

                                                                       
Query: 133 aggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 192
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  agg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 135

                                                                       
Query: 193 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 252
           |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |  
Sbjct: 136 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcc 195

                                                                       
Query: 253 -gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 311
            || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 196 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 255

                                                                       
Query: 312 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 315

                                                                       
Query: 372 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 431
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 316 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 375

                                                                       
Query: 432 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 491
           ||||||  ||| ||||||||||||| ||||||||   | |||||||||||||||||||| 
Sbjct: 376 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 432

                                                                       
Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |  || |  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 490

                  
Query: 552 ttggtta 558
           |||||||
Sbjct: 491 ttggtta 497

---

>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001
          Length = 512

 Score =  739 bits (373), Expect = 0.0
 Identities = 483/514 (93%), Gaps = 8/514 (1%)
 Strand = Plus / Minus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| |||||| ||||||||  |||||| ||||||||||||| |||||||||||||||
Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 449

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 448 cctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgattcccgta 390

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 330

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcc 281
           |||||||| ||||||||||||||||| |   || ||| |||||||||||||| |||||||
Sbjct: 329 acaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcc 270

                                                                       
Query: 282 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 210

                                                                       
Query: 342 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 401
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcga 150

                                                                       
Query: 402 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 461
           |||||||||||||||||| |||||||||||||||||  ||| ||||||||||||| ||||
Sbjct: 149 agtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaa 90

                                                                       
Query: 462 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 521
           ||||   | |||||||||||||||||||| |  || |  |||||||||||||||||||||
Sbjct: 89  accg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttga 35

                                             
Query: 522 agaatgagccggcgactcataggcagtggcttgg 555
           ||||||||||||||||||||||||||||||||||
Sbjct: 34  agaatgagccggcgactcataggcagtggcttgg 1

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  737 bits (372), Expect = 0.0
 Identities = 518/558 (92%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| || ||||||||||||||| |||||| || |||||| ||| ||| |||
Sbjct: 72  aatgcttcgggg-agctgaaaataagcatag-atccgg-ag-attcccgaatgggttaac 127

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 128 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 186

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 245

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||
Sbjct: 246 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgcta 305

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||||||||||||| |||||||| ||||||  | ||||||||||||||||||||||||
Sbjct: 306 ggcgaagcggttgagtcccgcaccccagatggtgagagtccagtagccgaaagcatcact 365

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 425

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 485

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 486 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 542

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 543 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602

                             
Query: 541 taggcagtggcttggtta 558
           |||| |||||| ||||||
Sbjct: 603 taggtagtggcctggtta 620

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  737 bits (372), Expect = 0.0
 Identities = 522/561 (93%), Gaps = 12/561 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 139642 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 139587

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 139586 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 139528

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139527 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 139469

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 139468 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 139409

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| ||  || ||| |||||||||||||  | |||||||||||||||||||||||
Sbjct: 139408 ggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcac 139349

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139348 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 139289

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 139288 accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaa 139229

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 139228 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 139172

                                                                          
Query: 480    gcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537
              ||||||||||| ||  |   |  |||||||||||||||||||||||||||||||||||||
Sbjct: 139171 gcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgac 139112

                                   
Query: 538    tcataggcagtggcttggtta 558
              |||||||||||||||||||||
Sbjct: 139111 tcataggcagtggcttggtta 139091



 Score =  737 bits (372), Expect = 0.0
 Identities = 522/561 (93%), Gaps = 12/561 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 109657 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 109712

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 109713 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 109771

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109772 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 109830

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 109831 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 109890

                                                                          
Query: 241    ggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| ||  || ||| |||||||||||||  | |||||||||||||||||||||||
Sbjct: 109891 ggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtagccgaaagcatcac 109950

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109951 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110010

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 110011 accaccttgcaaggctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaa 110070

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 110071 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 110127

                                                                          
Query: 480    gcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537
              ||||||||||| ||  |   |  |||||||||||||||||||||||||||||||||||||
Sbjct: 110128 gcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcgac 110187

                                   
Query: 538    tcataggcagtggcttggtta 558
              |||||||||||||||||||||
Sbjct: 110188 tcataggcagtggcttggtta 110208

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  735 bits (371), Expect = 0.0
 Identities = 517/558 (92%), Gaps = 11/558 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||  || |||||| |||||||||||
Sbjct: 4302 aatgcttcgggg-agttgaaaataagcatag-atccg--aggattcccgaataggtcaac 4357

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 4358 ctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacat 4416

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4417 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4475

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 4476 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgcta 4535

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            ||||||||  | || ||  |||||||||||||  ||||||||||||||||||||||||||
Sbjct: 4536 ggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4595

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4596 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 4655

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4656 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4715

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            |||||||||||||||    ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 4716 ggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 4772

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4773 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 4830

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||||||||||
Sbjct: 4831 taggcagtggcttggtta 4848

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  735 bits (371), Expect = 0.0
 Identities = 517/558 (92%), Gaps = 11/558 (1%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||  || |||||| |||||||||||
Sbjct: 23623 aatgcttcgggg-agttgaaaataagcatag-atccg--aggattcccgaataggtcaac 23568

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||  |||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 23567 ctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacat 23509

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23508 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 23450

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 23449 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgcta 23390

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||  | || ||  |||||||||||||  ||||||||||||||||||||||||||
Sbjct: 23389 ggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 23330

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23329 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 23270

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 23269 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 23210

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             |||||||||||||||    ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 23209 ggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 23153

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 23152 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 23095

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||||||||||
Sbjct: 23094 taggcagtggcttggtta 23077

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  735 bits (371), Expect = 0.0
 Identities = 518/558 (92%), Gaps = 12/558 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||  || |||||| |||||||||||
Sbjct: 4571 aatgcttcgggg-agttgaaaataagcatag-atccg--aggattcccgaataggtcaac 4626

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 4627 ctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacat 4685

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4686 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4744

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4745 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 4804

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            |||||||| || || ||  |||||||||||||  ||||||||||||||||||||||||||
Sbjct: 4805 ggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4864

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 4865 agcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagga 4924

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4925 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4984

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            |||||||||||||||  | ||| ||||||||||||| ||||||||   | ||||||||| 
Sbjct: 4985 ggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa- 5040

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||||||||||
Sbjct: 5099 taggcagtggcttggtta 5116

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  735 bits (371), Expect = 0.0
 Identities = 518/558 (92%), Gaps = 12/558 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||  || |||||| |||||||||||
Sbjct: 4571 aatgcttcgggg-agttgaaaataagcatag-atccg--aggattcccgaataggtcaac 4626

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 4627 ctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacat 4685

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4686 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4744

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4745 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 4804

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            |||||||| || || ||  |||||||||||||  ||||||||||||||||||||||||||
Sbjct: 4805 ggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagccgaaagcatcact 4864

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 4865 agcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaagga 4924

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4925 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaa 4984

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            |||||||||||||||  | ||| ||||||||||||| ||||||||   | ||||||||| 
Sbjct: 4985 ggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg---taagctcccaa- 5040

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            |||||||||| |   | |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactca 5098

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||||||||||
Sbjct: 5099 taggcagtggcttggtta 5116

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  729 bits (368), Expect = 0.0
 Identities = 523/561 (93%), Gaps = 14/561 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 1837 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 1892

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaat 179
            ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1952 cttagtagccagagg-aaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaat 2010

                                                                        
Query: 180  gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgctgc 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||
Sbjct: 2011 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgc 2070

                                                                        
Query: 239  taggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
            |||||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 2071 taggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 2130

                                                                        
Query: 298  actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 2190

                                                                        
Query: 358  ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 2250

                                                                        
Query: 418  aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477
            || |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||
Sbjct: 2251 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 2307

                                                                        
Query: 478  aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 537
            ||||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||
Sbjct: 2308 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 2365

                                 
Query: 538  tcataggcagtggcttggtta 558
            |||||||||||||||||||||
Sbjct: 2366 tcataggcagtggcttggtta 2386

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  720 bits (363), Expect = 0.0
 Identities = 518/560 (92%), Gaps = 11/560 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||| ||||||| |||||| || |||||| ||||||| |||
Sbjct: 86333 aatgcttcgggg-agttgaaaatgagcatag-atccgg-ag-attcccgaataggttaac 86388

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             | ||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 86389 ccttttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 86447

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 86448 cttagtagccagagg-aatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatg 86506

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgc 238
             |||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||||||
Sbjct: 86507 ggagcagcctaaaccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgc 86566

                                                                         
Query: 239   taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298
             |||||||||||||||||| | |||||||||||||  | ||||||||||||||||||||||
Sbjct: 86567 taggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatca 86626

                                                                         
Query: 299   ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358
              | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86627 ttggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 86686

                                                                         
Query: 359   gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86687 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 86746

                                                                         
Query: 419   aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478
             |||||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||
Sbjct: 86747 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 86803

                                                                         
Query: 479   agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538
             ||||||||||||  ||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 86804 agcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 86863

                                 
Query: 539   cataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 86864 tataggcagtggcttggtta 86883

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  720 bits (363), Expect = 0.0
 Identities = 518/559 (92%), Gaps = 13/559 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| ||||||||||||||  || |||||| || |||||| |||||| ||||
Sbjct: 567  aatgcttcgggg-agttgaaaataagccgag-atccgg-ag-attcccgaatagggcaac 622

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 623  ctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 681

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682  cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 740

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 741  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 800

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            |||||| | || |||||| | |||||||||||  ||||||||||||||||||||||||||
Sbjct: 801  ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 860

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 920

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaa 419
            ||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 921  ccaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaa 980

                                                                        
Query: 420  aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
            ||||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||| |||
Sbjct: 981  aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 1037

                                                                        
Query: 480  gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
            ||||||||||| || ||    |||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gcagtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgactc 1094

                               
Query: 540  ataggcagtggcttggtta 558
            |||||||||||||||||||
Sbjct: 1095 ataggcagtggcttggtta 1113

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  720 bits (363), Expect = 0.0
 Identities = 518/560 (92%), Gaps = 11/560 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||| ||||||| |||||| || |||||| ||||||| |||
Sbjct: 88419 aatgcttcgggg-agttgaaaattagcatag-atccgg-ag-attcccgaataggttaac 88474

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             |||||  ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct: 88475 ctttttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacat 88533

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 88534 cttagtagccagagg-aatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 88592

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgc 238
             ||||||||||||||||||||||||||||||||||||||||  ||| ||||  ||||||||
Sbjct: 88593 ggagcagcctaaaccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgc 88652

                                                                         
Query: 239   taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298
             |||||||||||||||||| | |||||||||||||  | ||||||||||||||||||||||
Sbjct: 88653 taggcgaagcggttgagtcctgcaccctagatggtgagagtccagtagccgaaagcatca 88712

                                                                         
Query: 299   ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358
              | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88713 ttggcttacgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 88772

                                                                         
Query: 359   gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88773 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 88832

                                                                         
Query: 419   aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478
             |||||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||
Sbjct: 88833 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 88889

                                                                         
Query: 479   agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538
             ||||||||||||  ||   |||||||||||||||||||||||||||||||||||||||||
Sbjct: 88890 agcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgact 88949

                                 
Query: 539   cataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 88950 tataggcagtggcttggtta 88969

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  718 bits (362), Expect = 0.0
 Identities = 518/559 (92%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||||||||||||  || |||||| || |||||| ||| |||||||
Sbjct: 142808 aatgcttcgggg-agttgaaaataagcgcag-atccgg-ag-attcccgaatgggtcaac 142753

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 142752 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 142694

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142693 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 142635

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||
Sbjct: 142634 ggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgcta 142575

                                                                          
Query: 241    ggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| | || ||||| |||||||||||||  | |||||||||||||||||||||||
Sbjct: 142574 ggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcac 142515

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142514 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 142455

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142454 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 142395

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   |  ||||||||
Sbjct: 142394 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaa 142338

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 142337 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 142280

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 142279 ataggcagtggcttggtta 142261



 Score =  718 bits (362), Expect = 0.0
 Identities = 518/559 (92%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| ||||||||||||||  || |||||| || |||||| ||| |||||||
Sbjct: 110520 aatgcttcgggg-agttgaaaataagcgcag-atccgg-ag-attcccgaatgggtcaac 110575

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 110576 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 110634

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110635 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 110693

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||
Sbjct: 110694 ggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgtcgtgctgcta 110753

                                                                          
Query: 241    ggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| | || ||||| |||||||||||||  | |||||||||||||||||||||||
Sbjct: 110754 ggcgaagcagctggagtgctgcaccctagatggtgagagtccagtagccgaaagcatcac 110813

                                                                          
Query: 300    tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110814 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 110873

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110874 accaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 110933

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
               |||||||||||||||||  ||| ||||||||||||| ||||||||   |  ||||||||
Sbjct: 110934 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taggctcccaa 110990

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 110991 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 111048

                                 
Query: 540    ataggcagtggcttggtta 558
              |||||||||||||||||||
Sbjct: 111049 ataggcagtggcttggtta 111067

---

>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7
             gene region
          Length = 47249

 Score =  714 bits (360), Expect = 0.0
 Identities = 464/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 46323 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 46378

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 46379 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 46437

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46438 cttactagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 46496

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 46497 ggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 46556

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 46557 ggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcact 46616

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46617 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 46676

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 46677 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 46736

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||| ||||
Sbjct: 46737 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaag 46793

                       
Query: 481   cagtgggagg 490
             ||||||||||
Sbjct: 46794 cagtgggagg 46803



 Score =  115 bits (58), Expect = 2e-22
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                       
Query: 501   ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 46875

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  714 bits (360), Expect = 0.0
 Identities = 464/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 130464 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 130409

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 130408 ctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 130350

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130349 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 130291

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 130290 ggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgcta 130231

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 130230 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 130171

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130170 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 130111

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 130110 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 130051

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 130050 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 129994

                        
Query: 481    cagtgggagg 490
              ||||||||||
Sbjct: 129993 cagtgggagg 129984



 Score =  714 bits (360), Expect = 0.0
 Identities = 464/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || |||||| |||||||||||
Sbjct: 101992 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaataggtcaac 102047

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 102048 ctttcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 102106

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102107 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 102165

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 102166 ggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgcta 102225

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 102226 ggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagccgaaagcatcact 102285

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102286 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 102345

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 102346 ccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaag 102405

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 102406 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 102462

                        
Query: 481    cagtgggagg 490
              ||||||||||
Sbjct: 102463 cagtgggagg 102472



 Score =  107 bits (54), Expect = 4e-20
 Identities = 57/58 (98%)
 Strand = Plus / Minus

                                                                        
Query: 501    ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggtta 129912



 Score =  107 bits (54), Expect = 4e-20
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                        
Query: 501    ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggtta 102544

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  704 bits (355), Expect = 0.0
 Identities = 519/562 (92%), Gaps = 14/562 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaa-ataggtcaa 59
              |||||||||||| |||||||||||||| ||| ||||||  | |||||| | |||||||||
Sbjct: 131800 aatgcttcgggg-agttgaaaataagcgtag-atccgg--ggattcccgatataggtcaa 131745

                                                                          
Query: 60     ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119
              |||||  |||||| ||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 131744 cctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaaca 131686

                                                                          
Query: 120    tcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131685 tcttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 131627

                                                                          
Query: 180    gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
              |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 131626 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 131567

                                                                          
Query: 240    aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
              ||||||||| |  |||  ||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 131566 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 131507

                                                                          
Query: 298    actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131506 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 131447

                                                                          
Query: 358    ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 131446 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 131387

                                                                          
Query: 418    aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477
              || |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||
Sbjct: 131386 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 131330

                                                                          
Query: 478    aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 536
              ||||||||||||| ||   | || ||||||||||||||||||||||||||||||||||||
Sbjct: 131329 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 131271

                                    
Query: 537    ctcataggcagtggcttggtta 558
              ||||||||||||||||||||||
Sbjct: 131270 ctcataggcagtggcttggtta 131249



 Score =  704 bits (355), Expect = 0.0
 Identities = 519/562 (92%), Gaps = 14/562 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaa-ataggtcaa 59
              |||||||||||| |||||||||||||| ||| ||||||  | |||||| | |||||||||
Sbjct: 103594 aatgcttcgggg-agttgaaaataagcgtag-atccgg--ggattcccgatataggtcaa 103649

                                                                          
Query: 60     ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119
              |||||  |||||| ||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct: 103650 cctttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaaca 103708

                                                                          
Query: 120    tcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179
              |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103709 tcttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 103767

                                                                          
Query: 180    gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
              |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 103768 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 103827

                                                                          
Query: 240    aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
              ||||||||| |  |||  ||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 103828 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 103887

                                                                          
Query: 298    actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103888 actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 103947

                                                                          
Query: 358    ggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggg 417
              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 103948 ggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgaggg 104007

                                                                          
Query: 418    aaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 477
              || |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||
Sbjct: 104008 aagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 104064

                                                                          
Query: 478    aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 536
              ||||||||||||| ||   | || ||||||||||||||||||||||||||||||||||||
Sbjct: 104065 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 104123

                                    
Query: 537    ctcataggcagtggcttggtta 558
              ||||||||||||||||||||||
Sbjct: 104124 ctcataggcagtggcttggtta 104145

---

>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2899

 Score =  702 bits (354), Expect = 0.0
 Identities = 514/558 (92%), Gaps = 12/558 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| ||||||||||||||  || |||||| || |||||| |||||| ||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagccgag-atccgg-ag-attcccgaatagggcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||| | || |||||| | |||||||||||  ||||||||||||||||||||||||||
Sbjct: 313 ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||| ||| ||||||||   | ||||| ||||
Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaag 549

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| || ||    |||||| ||||||||||||||| |||||||||||||||||
Sbjct: 550 cagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactca 606

                             
Query: 541 taggcagtggcttggtta 558
           || |||||||||||||||
Sbjct: 607 tacgcagtggcttggtta 624

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  700 bits (353), Expect = 0.0
 Identities = 392/406 (96%), Gaps = 13/406 (3%)
 Strand = Plus / Minus

                                                                         
Query: 158   ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419

                                                                         
Query: 218   gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359

                                                                         
Query: 278   gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299

                                                                         
Query: 338   aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392
             ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||
Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239

                                                                         
Query: 393   cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179

                                                                         
Query: 453   gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
             |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127

                                                           
Query: 513   gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 75081



 Score =  234 bits (118), Expect = 2e-58
 Identities = 156/162 (96%), Gaps = 5/162 (3%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 75641 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 75586

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75585 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 75526

                                                       
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
             ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75525 cttagtagccagagg-aaaagaaagcaaaagcgattcccgta 75485



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 88     gcaggcaagagacaacctggcgaactgaaacatcttagta 127
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  700 bits (353), Expect = 0.0
 Identities = 392/406 (96%), Gaps = 13/406 (3%)
 Strand = Plus / Plus

                                                                          
Query: 158    ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119

                                                                          
Query: 218    gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179

                                                                          
Query: 278    gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239

                                                                          
Query: 338    aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392
              ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||
Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299

                                                                          
Query: 393    cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359

                                                                          
Query: 453    gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
              |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411

                                                            
Query: 513    gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 382457



 Score =  234 bits (118), Expect = 2e-58
 Identities = 156/162 (96%), Gaps = 5/162 (3%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 381897 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 381952

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381953 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 382012

                                                        
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 382013 cttagtagccagagg-aaaagaaagcaaaagcgattcccgta 382053



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 88     gcaggcaagagacaacctggcgaactgaaacatcttagta 127
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Plus

                                                      
Query: 88     gcaggcaagagacaacctggcgaactgaaacatcttagta 127
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  700 bits (353), Expect = 0.0
 Identities = 392/406 (96%), Gaps = 13/406 (3%)
 Strand = Plus / Minus

                                                                          
Query: 158    ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510

                                                                          
Query: 218    gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450

                                                                          
Query: 278    gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390

                                                                          
Query: 338    aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392
              ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||
Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330

                                                                          
Query: 393    cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270

                                                                          
Query: 453    gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
              |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218

                                                            
Query: 513    gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 113172



 Score =  234 bits (118), Expect = 2e-58
 Identities = 156/162 (96%), Gaps = 5/162 (3%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 113732 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 113677

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113676 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 113617

                                                        
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 113616 cttagtagccagagg-aaaagaaagcaaaagcgattcccgta 113576



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 88     gcaggcaagagacaacctggcgaactgaaacatcttagta 127
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  700 bits (353), Expect = 0.0
 Identities = 392/406 (96%), Gaps = 13/406 (3%)
 Strand = Plus / Minus

                                                                          
Query: 158    ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192

                                                                          
Query: 218    gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132

                                                                          
Query: 278    gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072

                                                                          
Query: 338    aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392
              ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||
Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012

                                                                          
Query: 393    cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952

                                                                          
Query: 453    gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
              |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900

                                                            
Query: 513    gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 367854



 Score =  700 bits (353), Expect = 0.0
 Identities = 392/406 (96%), Gaps = 13/406 (3%)
 Strand = Plus / Minus

                                                                          
Query: 158    ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 217
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797

                                                                          
Query: 218    gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 277
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737

                                                                          
Query: 278    gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677

                                                                          
Query: 338    aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 392
              ||||||||||||||||||     |||||||||||||||||||||||||||||||||||||
Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617

                                                                          
Query: 393    cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557

                                                                          
Query: 453    gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
              |||||||||||||||||||||||||        |||||||||||||||||||||||||||
Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505

                                                            
Query: 513    gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggtta 184459



 Score =  234 bits (118), Expect = 2e-58
 Identities = 156/162 (96%), Gaps = 5/162 (3%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 368414 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 368359

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368358 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 368299

                                                        
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 368298 cttagtagccagagg-aaaagaaagcaaaagcgattcccgta 368258



 Score =  234 bits (118), Expect = 2e-58
 Identities = 156/162 (96%), Gaps = 5/162 (3%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 185019 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 184964

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184963 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184904

                                                        
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 184903 cttagtagccagagg-aaaagaaagcaaaagcgattcccgta 184863



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 39/40 (97%)
 Strand = Plus / Minus

                                                      
Query: 88     gcaggcaagagacaacctggcgaactgaaacatcttagta 127
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  700 bits (353), Expect = 0.0
 Identities = 519/560 (92%), Gaps = 17/560 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 171 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 226

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||  |||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 227 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 285

                                                                       
Query: 121 cttagt-agccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179
           |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cttagtgagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 344

                                                                       
Query: 180 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
           ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 345 gggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgct 403

                                                                       
Query: 240 aggcgaag-cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 298
           |||||||| ||   || ||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 404 aggcgaagacgcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 463

                                                                       
Query: 299 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||
Sbjct: 464 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaag 523

                                                                       
Query: 359 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 583

                                                                       
Query: 419 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 478
           | ||||||||||| |||||  ||| ||||||||||||| ||||||||   | ||||||||
Sbjct: 584 agggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg---taagctccca 639

                                                                       
Query: 479 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538
           ||||||||||||  |    |  ||||||||||||||||||||||||||||||||||||||
Sbjct: 640 agcagtgggaggcca----gggctctgaccgcgtgcctgttgaagaatgagccggcgact 695

                               
Query: 539 cataggcagtggcttggtta 558
           ||||||||||||||||||||
Sbjct: 696 cataggcagtggcttggtta 715

---

>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2867

 Score =  698 bits (352), Expect = 0.0
 Identities = 462/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||| ||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaag 549

                     
Query: 481 cagtgggagg 490
           ||||||||||
Sbjct: 550 cagtgggagg 559

---

>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2883

 Score =  698 bits (352), Expect = 0.0
 Identities = 462/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatcact 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||   || ||||||||||||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaag 549

                     
Query: 481 cagtgggagg 490
           ||||||||||
Sbjct: 550 cagtgggagg 559



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Plus

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggtta 638

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  694 bits (350), Expect = 0.0
 Identities = 515/559 (92%), Gaps = 12/559 (2%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 52615 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 52560

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 52559 cttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacat 52501

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 52500 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 52442

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             |||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 52441 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 52382

                                                                         
Query: 241   ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
             |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| 
Sbjct: 52381 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 52322

                                                                         
Query: 300   tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
             |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 52321 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 52262

                                                                         
Query: 360   accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
             |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||
Sbjct: 52261 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 52202

                                                                         
Query: 420   aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
              ||||||||||||||||| |||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 52201 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 52145

                                                                         
Query: 480   gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
             ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 52144 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 52087

                                
Query: 540   ataggcagtggcttggtta 558
             |||||||| ||||||||||
Sbjct: 52086 ataggcagcggcttggtta 52068



 Score =  694 bits (350), Expect = 0.0
 Identities = 515/559 (92%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 37213 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 37268

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 37269 cttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacat 37327

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 37328 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 37386

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             |||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 37387 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 37446

                                                                         
Query: 241   ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
             |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| 
Sbjct: 37447 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 37506

                                                                         
Query: 300   tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
             |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 37507 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 37566

                                                                         
Query: 360   accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
             |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||
Sbjct: 37567 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 37626

                                                                         
Query: 420   aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
              ||||||||||||||||| |||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 37627 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 37683

                                                                         
Query: 480   gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
             ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 37684 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 37741

                                
Query: 540   ataggcagtggcttggtta 558
             |||||||| ||||||||||
Sbjct: 37742 ataggcagcggcttggtta 37760

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  694 bits (350), Expect = 0.0
 Identities = 515/559 (92%), Gaps = 12/559 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| |||||||||||||||||| |||||| || |||||| |||||| ||||
Sbjct: 4141 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccgaatagggcaac 4196

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 4197 cttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacat 4255

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4256 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 4314

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||||
Sbjct: 4315 ggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgcta 4374

                                                                        
Query: 241  ggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
            |||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| 
Sbjct: 4375 ggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcat 4434

                                                                        
Query: 300  tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
            |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4435 tagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaagg 4494

                                                                        
Query: 360  accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
            |||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||
Sbjct: 4495 accaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaa 4554

                                                                        
Query: 420  aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
             ||||||||||||||||| |||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 4555 gggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcccaa 4611

                                                                        
Query: 480  gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
            ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 4612 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 4669

                               
Query: 540  ataggcagtggcttggtta 558
            |||||||| ||||||||||
Sbjct: 4670 ataggcagcggcttggtta 4688

---

>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2902

 Score =  692 bits (349), Expect = 0.0
 Identities = 461/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           ||||||||||||  ||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcggggg-gttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||
Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 549

                     
Query: 481 cagtgggagg 490
           ||||||||||
Sbjct: 550 cagtgggagg 559



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 55/58 (94%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggtta 637

---

>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2913

 Score =  690 bits (348), Expect = 0.0
 Identities = 461/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||
Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||   || ||||||||||||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg---taagctcccaag 549

                     
Query: 481 cagtgggagg 490
           ||||||||||
Sbjct: 550 cagtgggagg 559



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 52/58 (89%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||| ||||||||||||||| ||||| || |||| ||||| |||||||||||||||
Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggtta 637

---

>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2894

 Score =  690 bits (348), Expect = 0.0
 Identities = 461/490 (94%), Gaps = 9/490 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||| ||
Sbjct: 313 ggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagcatccct 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||| ||| ||||||||   | ||||||||||
Sbjct: 493 ggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctcccaag 549

                     
Query: 481 cagtgggagg 490
           ||||||||||
Sbjct: 550 cagtgggagg 559



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||| |||||||||||| || ||||||||| ||||||||||| |||||||||||||
Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggtta 637

---

>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence
          Length = 640

 Score =  676 bits (341), Expect = 0.0
 Identities = 490/529 (92%), Gaps = 12/529 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 120 aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 175

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||  |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 176 ctttcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacat 234

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cttagtagccggagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 293

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 294 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 353

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||||||||  ||||||| |||||||||||| | ||||||||||||||||||||||||
Sbjct: 354 ggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagccgaaagcatcact 413

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 473

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 474 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 533

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||||||||   ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 534 ggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg---taagctcccaag 590

                                                            
Query: 481 cagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatga 528
           ||| |||||| |   || |  ||||||||||||||||||||||||||||
Sbjct: 591 cagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatga 637

---

>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full
           insert sequence
          Length = 998

 Score =  672 bits (339), Expect = 0.0
 Identities = 352/355 (99%), Gaps = 1/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 13  attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 72

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73  cctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgattcccgta 131

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 191

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 251

                                                                       
Query: 283 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 252 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 311

                                                                  
Query: 343 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 397
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 366

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  672 bits (339), Expect = 0.0
 Identities = 514/564 (91%), Gaps = 15/564 (2%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 128375 aatgcttcgggg-agctgaaaacaagcatag-atccgg-ag-attcccgaataggttaac 128320

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 128319 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 128261

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 128260 cttagtagccagagg-aaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtg 128202

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtg 234
              |||| ||||||||||||||||||||||||||||| ||||      ||||||||| |||||
Sbjct: 128201 ggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtg 128142

                                                                          
Query: 235    ctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 294
              |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 128141 ctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagc 128082

                                                                          
Query: 295    atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 354
              |||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 128081 atcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcag 128022

                                                                          
Query: 355    caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 414
              ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 128021 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtga 127962

                                                                          
Query: 415    gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 474
              ||||| |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||
Sbjct: 127961 gggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagct 127905

                                                                          
Query: 475    cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 534
              |||||||||||||||| |||   ||||||||||||| |||||||||| ||||||||||||
Sbjct: 127904 cccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggc 127845

                                      
Query: 535    gactcataggcagtggcttggtta 558
              ||||||||||||||||| ||||||
Sbjct: 127844 gactcataggcagtggcctggtta 127821



 Score =  672 bits (339), Expect = 0.0
 Identities = 514/564 (91%), Gaps = 15/564 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 95072 aatgcttcgggg-agctgaaaacaagcatag-atccgg-ag-attcccgaataggttaac 95127

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 95128 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 95186

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 95187 cttagtagccagagg-aaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtg 95245

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagc------aatacaagcgttgtg 234
             |||| ||||||||||||||||||||||||||||| ||||      ||||||||| |||||
Sbjct: 95246 ggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtg 95305

                                                                         
Query: 235   ctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagc 294
             |||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||
Sbjct: 95306 ctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtccagtagccgaaagc 95365

                                                                         
Query: 295   atcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcag 354
             |||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 95366 atcactagctcacgctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcag 95425

                                                                         
Query: 355   caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtga 414
             ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 95426 caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtga 95485

                                                                         
Query: 415   gggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagct 474
             ||||| |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||
Sbjct: 95486 gggaagggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagct 95542

                                                                         
Query: 475   cccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggc 534
             |||||||||||||||| |||   ||||||||||||| |||||||||| ||||||||||||
Sbjct: 95543 cccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggc 95602

                                     
Query: 535   gactcataggcagtggcttggtta 558
             ||||||||||||||||| ||||||
Sbjct: 95603 gactcataggcagtggcctggtta 95626

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  658 bits (332), Expect = 0.0
 Identities = 509/558 (91%), Gaps = 10/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| || |||||||||| |||| |||||| || |||||| ||||||| |||
Sbjct: 116138 aatgcttcgggg-agctgaaaataagtatag-atccgg-ag-attcccgaataggttaac 116083

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              |||| ||||||| |||||||| |||  |||| ||||||||||||||||||||||||||||
Sbjct: 116082 ctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacat 116024

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 116023 cttagtagccagagg-aaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatg 115965

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||||
Sbjct: 115964 ggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgcta 115906

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| ||||||| | |||||||||||||  ||||||||||| ||||||||| ||||
Sbjct: 115905 ggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcact 115846

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115845 agcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 115786

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115785 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 115726

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 115725 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 115669

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              |||||||||| |||    |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 115668 cagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 115609

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||| ||||||
Sbjct: 115608 taggcagtggcctggtta 115591



 Score =  658 bits (332), Expect = 0.0
 Identities = 509/558 (91%), Gaps = 10/558 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| || |||||||||| |||| |||||| || |||||| ||||||| |||
Sbjct: 85982 aatgcttcgggg-agctgaaaataagtatag-atccgg-ag-attcccgaataggttaac 86037

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             |||| ||||||| |||||||| |||  |||| ||||||||||||||||||||||||||||
Sbjct: 86038 ctttgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacat 86096

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 86097 cttagtagccagagg-aaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatg 86155

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             ||| |||||||||||||||||||||| ||||||| |||| | | ||| |||||| |||||
Sbjct: 86156 ggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgcta 86214

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             |||||||| ||||||| | |||||||||||||  ||||||||||| ||||||||| ||||
Sbjct: 86215 ggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcact 86274

                                                                         
Query: 301   agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86275 agcttaggctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 86334

                                                                         
Query: 361   ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86335 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 86394

                                                                         
Query: 421   ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
             |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 86395 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaag 86451

                                                                         
Query: 481   cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
             |||||||||| |||    |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 86452 cagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 86511

                               
Query: 541   taggcagtggcttggtta 558
             ||||||||||| ||||||
Sbjct: 86512 taggcagtggcctggtta 86529

---

>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity
           inducing protein, complete cds
          Length = 2303

 Score =  654 bits (330), Expect = 0.0
 Identities = 416/443 (93%), Gaps = 4/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 116 aacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 175
           |||||||||||||||||||| |||  || |||||||||||||||||||||||||||||||
Sbjct: 564 aacatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcg 505

                                                                       
Query: 176 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgc 235
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 504 aaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgc 445

                                                                       
Query: 236 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295
           |||||||||||||||| |||||| |||||||||||||| | |||||||||||||||||||
Sbjct: 444 tgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagccgaaagca 385

                                                                       
Query: 296 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 325

                                                                       
Query: 356 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 265

                                                                       
Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475
           |||| |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||
Sbjct: 264 ggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctc 208

                                                                       
Query: 476 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535
           ||||||||||||||| |   | |  |||||||||||||||||||||||||||||||||||
Sbjct: 207 ccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatgagccggcg 149

                                  
Query: 536 actcataggcagtggcttggtta 558
           |||||||||||||||||||||||
Sbjct: 148 actcataggcagtggcttggtta 126

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3020

 Score =  652 bits (329), Expect = 0.0
 Identities = 507/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| || ||||||||||||| | |||||| || |||||| ||||||| |||
Sbjct: 72  aatgcttcgggg-agctgaaaataagcat-ggatccgg-ag-attcccgaataggttaac 127

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||| |||||||| |||  |||| ||||||||||||||||||||||||||||
Sbjct: 128 cttttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacat 186

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 187 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 245

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||| ||||||||||||||||||||||||||||| ||||||   | ||||||||  ||||
Sbjct: 246 ggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgcta 305

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||||| ||||| | | ||||| |||||||  | ||||||||||||||||||||||||
Sbjct: 306 ggcgaagcagttgaatcctgcaccatagatggtgagagtccagtagccgaaagcatcact 365

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agtttatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 425

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 485

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | ||||||||||
Sbjct: 486 ggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaag 542

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| |||    |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 543 cagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactta 602

                             
Query: 541 taggcagtggcttggtta 558
           |||| |||||| ||||||
Sbjct: 603 taggtagtggcctggtta 620

---

>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for
            tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence
          Length = 2767

 Score =  644 bits (325), Expect = 0.0
 Identities = 508/559 (90%), Gaps = 10/559 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| || ||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 2115 aatgcttcgggg-agctgaaaataagcatag-atccgg-ag-attcccgaataggttaac 2170

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 2171 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 2229

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2230 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 2288

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||  |||||||||||||||||||||||||||||||||||| | ||| |||||  |||||
Sbjct: 2289 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 2348

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            |||||||| ||||||| | |||||||||||||  | |||||||||||||||||||| || 
Sbjct: 2349 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 2408

                                                                        
Query: 301  ag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
            |  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 2468

                                                                        
Query: 360  accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
            ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2469 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 2528

                                                                        
Query: 420  aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
            ||||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 2529 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 2585

                                                                        
Query: 480  gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
            ||||||||||| |||    |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 2586 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 2645

                               
Query: 540  ataggcagtggcttggtta 558
            ||||| |||||| ||||||
Sbjct: 2646 ataggtagtggcctggtta 2664

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  644 bits (325), Expect = 0.0
 Identities = 474/520 (91%), Gaps = 9/520 (1%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||||||||||| |||||||| |||  || ||||||||||||
Sbjct: 110 attcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaa 168

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || ||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||
Sbjct: 169 cccggcgaactgaaacatcttagtagccggagg-aaaagaaagcaaaagcgattctcgta 227

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||
Sbjct: 228 gtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctat 287

                                                                       
Query: 223 acaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 278
           ||||    || ||| ||||||||||||||| ||||||| | |||||| ||||||  | ||
Sbjct: 288 acaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagag 347

                                                                       
Query: 279 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 338
           ||||||| |||||||||| || | |||||||||| |||||||||||||||||||||||||
Sbjct: 348 tccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtgga 407

                                                                       
Query: 339 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 467

                                                                       
Query: 399 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 458
           |||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||| |
Sbjct: 468 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 527

                                                                       
Query: 459 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 518
           |||||||   | |||||||||||||||||||| |||   |||||||||||||||||||||
Sbjct: 528 gaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgt 584

                                                   
Query: 519 tgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||| |||||||||||| ||||||
Sbjct: 585 tgaagaatgagccggcgacttataggcagtggcctggtta 624

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  644 bits (325), Expect = 0.0
 Identities = 508/559 (90%), Gaps = 10/559 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| || ||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 118078 aatgcttcgggg-agctgaaaataagcatag-atccgg-ag-attcccgaataggttaac 118023

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 118022 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 117964

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 117963 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 117905

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||  |||||||||||||||||||||||||||||||||||| | ||| |||||  |||||
Sbjct: 117904 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 117845

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              |||||||| ||||||| | |||||||||||||  | |||||||||||||||||||| || 
Sbjct: 117844 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 117785

                                                                          
Query: 301    ag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
              |  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117784 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 117725

                                                                          
Query: 360    accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
              ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 117724 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 117665

                                                                          
Query: 420    aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
              ||||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 117664 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 117608

                                                                          
Query: 480    gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
              ||||||||||| |||    |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 117607 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 117548

                                 
Query: 540    ataggcagtggcttggtta 558
              ||||| |||||| ||||||
Sbjct: 117547 ataggtagtggcctggtta 117529



 Score =  644 bits (325), Expect = 0.0
 Identities = 508/559 (90%), Gaps = 10/559 (1%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| || ||||||||||||||| |||||| || |||||| ||||||| |||
Sbjct: 90024 aatgcttcgggg-agctgaaaataagcatag-atccgg-ag-attcccgaataggttaac 90079

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||| |||||| |||||||| |||  |||||||||||||||||||||||||||||||||
Sbjct: 90080 cttttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacat 90138

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 90139 cttagtagccagagg-aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatg 90197

                                                                         
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
             |||  |||||||||||||||||||||||||||||||||||| | ||| |||||  |||||
Sbjct: 90198 ggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataagtgttgttttgcta 90257

                                                                         
Query: 241   ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
             |||||||| ||||||| | |||||||||||||  | |||||||||||||||||||| || 
Sbjct: 90258 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagccgaaagcataaca 90317

                                                                         
Query: 301   ag-cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
             |  || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90318 acactcatgctctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 90377

                                                                         
Query: 360   accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
             ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 90378 accaccttgtaaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaa 90437

                                                                         
Query: 420   aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
             ||||||||||||||||||  ||| ||||||||||||| ||||||||   | |||||||||
Sbjct: 90438 aggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaa 90494

                                                                         
Query: 480   gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
             ||||||||||| |||    |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 90495 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 90554

                                
Query: 540   ataggcagtggcttggtta 558
             ||||| |||||| ||||||
Sbjct: 90555 ataggtagtggcctggtta 90573

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
            |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 3961 aatgcttcgggg-agctgaaaagaagcatag-atccgg-ag-attcccgaataggttaac 4016

                                                                        
Query: 61   cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
            ||||| |||||| |||||||| ||  || | |||||||||||| ||||||||||||||||
Sbjct: 4017 cttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacat 4075

                                                                        
Query: 121  cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
            ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 4076 cttagtagccagagg-aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 4134

                                                                        
Query: 181  ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
            |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4135 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 4194

                                                                        
Query: 241  ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
            || ||||| ||||||| | |||||| ||||||  | ||||||||||||||||||| ||||
Sbjct: 4195 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 4254

                                                                        
Query: 301  agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
              ||||  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4255 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 4314

                                                                        
Query: 361  ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4315 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 4374

                                                                        
Query: 421  ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
            |||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| |||||
Sbjct: 4375 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 4431

                                                                        
Query: 481  cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
            ||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 4432 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 4491

                              
Query: 541  taggcagtggcttggtta 558
            ||||||||||| ||||||
Sbjct: 4492 taggcagtggcctggtta 4509

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| || |||||||||| |||| |||||| || |||||| ||||||| |||
Sbjct: 55  aatgcttcgggg-agctgaaaataagtatag-atccgg-ag-attcccgaataggttaac 110

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||||||||||| ||||||||||||  || ||||||||||||||||||||||||||||||
Sbjct: 111 cttttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacat 169

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           |||||||||| |||| || |||||||||||||||||| |||||||||||||||||||| |
Sbjct: 170 cttagtagccggagg-aagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacg 228

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||| |||| | | |||| ||||  |||||
Sbjct: 229 ggagcagcctaaaccgtgaaaacggggttgtgggggagctaaagaagcattgtattgcta 288

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||||| ||||||| | |||||||||||||  | ||||||||| |||||||||| || 
Sbjct: 289 ggcgaagcagttgagtcctgcaccctagatggtgagagtccagtaaccgaaagcattaca 348

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 349 agcttgggctctaacccgagtaacatggggcacgtggaatcccgtgtgaatcagcaagga 408

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 468

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||||||   | |||| |||||
Sbjct: 469 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagcttccaag 525

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           |||||||||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 526 cagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 585

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||| ||||||
Sbjct: 586 taggcagtggcctggtta 603

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 71  aatgcttcgggg-agctgaaaagaagcatag-atccgg-ag-attcccgaataggttaac 126

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||| |||||||| ||  || | |||||||||||| ||||||||||||||||
Sbjct: 127 cttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacat 185

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cttagtagccagagg-aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 245 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 304

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           || ||||| ||||||| | |||||| ||||||  | ||||||||||||||||||| ||||
Sbjct: 305 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 364

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             ||||  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| |||||
Sbjct: 485 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 541

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 542 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||| ||||||
Sbjct: 602 taggcagtggcctggtta 619

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 151174 aatgcttcgggg-agctgaaaagaagcatag-atccgg-ag-attcccgaataggttaac 151119

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| |||||||| ||  || | |||||||||||| ||||||||||||||||
Sbjct: 151118 cttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacat 151060

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 151059 cttagtagccagagg-aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 151001

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 151000 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 150941

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              || ||||| ||||||| | |||||| ||||||  | ||||||||||||||||||| ||||
Sbjct: 150940 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 150881

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                ||||  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150880 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 150821

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150820 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 150761

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| |||||
Sbjct: 150760 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 150704

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 150703 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 150644

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||| ||||||
Sbjct: 150643 taggcagtggcctggtta 150626



 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 117492 aatgcttcgggg-agctgaaaagaagcatag-atccgg-ag-attcccgaataggttaac 117547

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| |||||| |||||||| ||  || | |||||||||||| ||||||||||||||||
Sbjct: 117548 cttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacat 117606

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 117607 cttagtagccagagg-aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 117665

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 117666 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 117725

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              || ||||| ||||||| | |||||| ||||||  | ||||||||||||||||||| ||||
Sbjct: 117726 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 117785

                                                                          
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
                ||||  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117786 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 117845

                                                                          
Query: 361    ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117846 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 117905

                                                                          
Query: 421    ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
              |||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| |||||
Sbjct: 117906 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 117962

                                                                          
Query: 481    cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
              ||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 117963 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 118022

                                
Query: 541    taggcagtggcttggtta 558
              ||||||||||| ||||||
Sbjct: 118023 taggcagtggcctggtta 118040

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA,
           complete sequence
          Length = 3503

 Score =  642 bits (324), Expect = 0.0
 Identities = 506/558 (90%), Gaps = 9/558 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| || |||||| |||||||| |||||| || |||||| ||||||| |||
Sbjct: 71  aatgcttcgggg-agctgaaaagaagcatag-atccgg-ag-attcccgaataggttaac 126

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| |||||| |||||||| ||  || | |||||||||||| ||||||||||||||||
Sbjct: 127 cttttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacat 185

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 cttagtagccagagg-aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 244

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 245 ggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgcta 304

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           || ||||| ||||||| | |||||| ||||||  | ||||||||||||||||||| ||||
Sbjct: 305 ggtgaagcagttgagttctgcaccccagatggtgagagtccagtagccgaaagcaccact 364

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
             ||||  || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gtcttacactttaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 424

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 484

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           |||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| |||||
Sbjct: 485 ggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagcttccaag 541

                                                                       
Query: 481 cagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactca 540
           ||||| |||| |||   ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 542 cagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactta 601

                             
Query: 541 taggcagtggcttggtta 558
           ||||||||||| ||||||
Sbjct: 602 taggcagtggcctggtta 619

---

>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2927

 Score =  638 bits (322), Expect = e-180
 Identities = 460/496 (92%), Gaps = 10/496 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| ||||||||||||||  || |||||| || |||||| |||||| ||||
Sbjct: 79  aatgcttcgggg-agttgaaaataagccgag-atccgg-ag-attcccgaatagggcaac 134

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||  |||| | ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 135 ctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 193

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 252

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 253 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 312

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           |||||| | || |||||| | |||||||||||  ||||||||||||||||||||||||||
Sbjct: 313 ggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcact 372

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 432

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 433 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 492

                                                                       
Query: 421 ggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaag 480
           ||||||||||| |||||  ||| ||||||||| ||| ||||||||   | ||||| ||||
Sbjct: 493 ggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaag 548

                           
Query: 481 cagtgggaggggaaag 496
           |||||||||| |||||
Sbjct: 549 cagtgggaggagaaag 564

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  632 bits (319), Expect = e-178
 Identities = 471/517 (91%), Gaps = 6/517 (1%)
 Strand = Plus / Minus

                                                                          
Query: 43     attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
              |||||| ||||||| |||||||| |||| | |||||||| |||  |||||| ||||||||
Sbjct: 146450 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 146392

                                                                          
Query: 103    cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 146391 cctggcgaactgaaacatcttagtagccagagg-aagagaaagcaaaagcgattcccgta 146333

                                                                          
Query: 163    gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 146332 gtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaat 146273

                                                                          
Query: 223    acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
              | ||||||| |||||||||||||||| ||||||| | | |||||||||||  | ||||||
Sbjct: 146272 ataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtcca 146213

                                                                          
Query: 283    gtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatc 341
              |||||||||||||||||| || ||||||||  |||||||||||||||||||||  |||||
Sbjct: 146212 gtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatc 146153

                                                                          
Query: 342    ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 401
              ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 146152 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaa 146093

                                                                          
Query: 402    agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 461
              |||||||||||||||||||||||||||||||||||   ||| ||||||||||||| ||||
Sbjct: 146092 agtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaa 146033

                                                                          
Query: 462    accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 521
              ||||   |  ||||||||||||||||||| |||   |||| |||||||||||||||||||
Sbjct: 146032 accg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttga 145976

                                                   
Query: 522    agaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||| |||||||||||| ||||||
Sbjct: 145975 agaatgagccggcgacttataggcagtggcctggtta 145939



 Score =  632 bits (319), Expect = e-178
 Identities = 471/517 (91%), Gaps = 6/517 (1%)
 Strand = Plus / Plus

                                                                          
Query: 43     attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
              |||||| ||||||| |||||||| |||| | |||||||| |||  |||||| ||||||||
Sbjct: 112012 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 112070

                                                                          
Query: 103    cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 112071 cctggcgaactgaaacatcttagtagccagagg-aagagaaagcaaaagcgattcccgta 112129

                                                                          
Query: 163    gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
              |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 112130 gtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaat 112189

                                                                          
Query: 223    acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
              | ||||||| |||||||||||||||| ||||||| | | |||||||||||  | ||||||
Sbjct: 112190 ataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtcca 112249

                                                                          
Query: 283    gtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatc 341
              |||||||||||||||||| || ||||||||  |||||||||||||||||||||  |||||
Sbjct: 112250 gtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatc 112309

                                                                          
Query: 342    ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 401
              ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 112310 ccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaa 112369

                                                                          
Query: 402    agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 461
              |||||||||||||||||||||||||||||||||||   ||| ||||||||||||| ||||
Sbjct: 112370 agtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaa 112429

                                                                          
Query: 462    accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 521
              ||||   |  ||||||||||||||||||| |||   |||| |||||||||||||||||||
Sbjct: 112430 accg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttga 112486

                                                   
Query: 522    agaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||| |||||||||||| ||||||
Sbjct: 112487 agaatgagccggcgacttataggcagtggcctggtta 112523

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
           genes, complete sequence; chloroplast
          Length = 3069

 Score =  613 bits (309), Expect = e-172
 Identities = 412/436 (94%), Gaps = 9/436 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 68  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 123

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 124 ctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacat 182

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 241

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 301

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||| || | | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 302 ggcgaagcggtggaatactgcaccctagatggcgatagtccagtagccgaaagcatcact 361

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 421

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           |||||||||||||||||||||| |  |||||||||||| |||||||||||||||||||| 
Sbjct: 422 ccaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagtaccgtgagggaag 479

                           
Query: 421 ggtgaaaagaaccccc 436
           |||| |||||||||||
Sbjct: 480 ggtg-aaagaaccccc 494

---

>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence;
           chloroplast
          Length = 467

 Score =  607 bits (306), Expect = e-170
 Identities = 402/426 (94%), Gaps = 6/426 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||| ||| |||||| || |||||| |||||||||||
Sbjct: 48  aatgcttcgggg-agttgaaaataagcgtag-atccgg-ag-attcccgaataggtcaac 103

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 104 ctttcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaacat 162

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cttagtaaccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 221

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 222 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgcta 281

                                                                       
Query: 241 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
           ||||||||||  ||   |||||||||||||||    ||||||||||||||||||||||||
Sbjct: 282 ggcgaagcggccgaacaccgcaccctagatggtgggagtccagtagccgaaagcatcact 341

                                                                       
Query: 301 agcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 360
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagga 401

                                                                       
Query: 361 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 402 ccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaag 461

                 
Query: 421 ggtgaa 426
           ||||||
Sbjct: 462 ggtgaa 467

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  577 bits (291), Expect = e-161
 Identities = 501/559 (89%), Gaps = 13/559 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||  || |||||| ||| ||  |||
Sbjct: 71  aatgcttcgggg-agttgaaaataagcatag-atccg-tag-attcccgaatggggtaac 126

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| | ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 127 ctttcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacat 185

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 186 cttagtagccagagg-aaaataaagcaaaagcgattcccatagtagcggcgagcgaaatg 244

                                                                       
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
           ||| |||||||||||| |||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 245 ggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgcta 304

                                                                       
Query: 241 ggcgaagcgg-ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
           |||||||| | || | ||  |||||||||||||| |||||||||||| | ||||||||||
Sbjct: 305 ggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcac 364

                                                                       
Query: 300 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 359
           ||  ||  |||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 365 tacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaagg 424

                                                                       
Query: 360 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 419
           |||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||||||
Sbjct: 425 accaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaa 484

                                                                       
Query: 420 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 479
            ||||||||||| ||||| |||| ||||||||||||| ||||||||   | |||| ||||
Sbjct: 485 gggtgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctaccaa 540

                                                                       
Query: 480 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 539
           ||||||||||| |  || |  |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactc 598

                              
Query: 540 ataggcagtggcttggtta 558
           |||||||| ||||||||||
Sbjct: 599 ataggcagcggcttggtta 617

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  565 bits (285), Expect = e-158
 Identities = 332/341 (97%), Gaps = 5/341 (1%)
 Strand = Plus / Minus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||| ||||||||| |||||| || ||||||||||||||||||
Sbjct: 123399 aatgcttcgggg-agttgaaattaagcatag-atccgg-ag-attcccaaataggtcaac 123344

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123343 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 123284

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123283 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 123225

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123224 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 123165

                                                                          
Query: 241    ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123164 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 123105

                                                       
Query: 301    agcttatgctctgacccgagtagcatggggcacgtggaatc 341
              |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 123104 agcttacgctctgccccgagtagcatggggcacgtggaatc 123064



 Score =  422 bits (213), Expect = e-115
 Identities = 216/217 (99%)
 Strand = Plus / Minus

                                                                          
Query: 333    cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 392
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761

                                                                          
Query: 393    cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701

                                                                          
Query: 453    gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641

                                                   
Query: 513    gcctgttgaagaatgagccggcgactcataggcagtg 549
              ||||||||||||||||||||| |||||||||||||||
Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtg 122604

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  565 bits (285), Expect = e-158
 Identities = 332/341 (97%), Gaps = 5/341 (1%)
 Strand = Plus / Minus

                                                                            
Query: 1        aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
                |||||||||||| |||||||| ||||||||| |||||| || ||||||||||||||||||
Sbjct: 12825940 aatgcttcgggg-agttgaaattaagcatag-atccgg-ag-attcccaaataggtcaac 12825885

                                                                            
Query: 61       cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
                ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825884 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 12825825

                                                                            
Query: 121      cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
                ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825824 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 12825766

                                                                            
Query: 181      ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825765 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 12825706

                                                                            
Query: 241      ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 300
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825705 ggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcact 12825646

                                                         
Query: 301      agcttatgctctgacccgagtagcatggggcacgtggaatc 341
                |||||| |||||| |||||||||||||||||||||||||||
Sbjct: 12825645 agcttacgctctgccccgagtagcatggggcacgtggaatc 12825605



 Score =  422 bits (213), Expect = e-115
 Identities = 216/217 (99%)
 Strand = Plus / Minus

                                                                            
Query: 333      cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 392
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302

                                                                            
Query: 393      cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 452
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242

                                                                            
Query: 453      gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 512
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182

                                                     
Query: 513      gcctgttgaagaatgagccggcgactcataggcagtg 549
                ||||||||||||||||||||| |||||||||||||||
Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtg 12825145



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 278      gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 337
                ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| ||||
Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
           insert sequence
          Length = 2589

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 272 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 331
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1   gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60

                                                                       
Query: 332 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120

                                                                       
Query: 392 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 451
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180

                                                                       
Query: 452 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240

                                                          
Query: 512 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 287

---

>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence
          Length = 336

 Score =  549 bits (277), Expect = e-153
 Identities = 321/333 (96%), Gaps = 2/333 (0%)
 Strand = Plus / Minus

                                                                       
Query: 58  aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 117
           ||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277

                                                                       
Query: 118 catcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 177
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 catcttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 218

                                                                       
Query: 178 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 217 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctg 158

                                                                       
Query: 238 ctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
           ||||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 157 ctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatc 98

                                                                       
Query: 298 actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  actagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 38

                                            
Query: 358 ggaccaccttgcaaggctaaatactcctgggtg 390
           |||||||||||||||||||||||||||||||||
Sbjct: 37  ggaccaccttgcaaggctaaatactcctgggtg 5

---

>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full
           insert sequence
          Length = 1634

 Score =  462 bits (233), Expect = e-127
 Identities = 236/237 (99%)
 Strand = Plus / Plus

                                                                       
Query: 322 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60

                                                                       
Query: 382 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120

                                                                       
Query: 442 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 501
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180

                                                                    
Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 237

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  440 bits (222), Expect = e-120
 Identities = 326/360 (90%), Gaps = 3/360 (0%)
 Strand = Plus / Minus

                                                                        
Query: 199  aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 258
            ||||||||||||||||||||||||| ||||||||||  |||||| ||||| ||||||| |
Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225

                                                                        
Query: 259  cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 318
             |||||||||||||  | |||||||||| |||||||  || | ||||| ||||| |||||
Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165

                                                                        
Query: 319  agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105

                                                                        
Query: 379  tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045

                                                                        
Query: 439  tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 498
             ||| ||||||||||||| ||||||||   | |||  ||||||||||||||| ||| |  
Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988

                                                                        
Query: 499  atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
            |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928



 Score =  196 bits (99), Expect = 5e-47
 Identities = 143/155 (92%), Gaps = 2/155 (1%)
 Strand = Plus / Minus

                                                                        
Query: 43   attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
            |||||| ||||||| |||||||| |||||| ||||||||||||| ||||| ||| | |||
Sbjct: 6467 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaa 6409

                                                                        
Query: 103  cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
            ||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||||||
Sbjct: 6408 cctggtgaactgaaacatcttagtaaccagagg-aagagaaagcaaaagcgattcccgta 6350

                                               
Query: 163  gtagcggcgagcgaaatgggagcagcctaaaccgt 197
            |||||||||||||||||||||||||||||||||||
Sbjct: 6349 gtagcggcgagcgaaatgggagcagcctaaaccgt 6315

---

>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full
           insert sequence
          Length = 1935

 Score =  438 bits (221), Expect = e-120
 Identities = 221/221 (100%)
 Strand = Plus / Plus

                                                                       
Query: 338 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60

                                                                       
Query: 398 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 457
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120

                                                                       
Query: 458 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 517
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180

                                                    
Query: 518 ttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggtta 221

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  428 bits (216), Expect = e-117
 Identities = 437/509 (85%), Gaps = 4/509 (0%)
 Strand = Plus / Plus

                                                                          
Query: 43     attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
              |||||| ||||||| ||||||  |||||||||||||||| ||  ||||| ||||||||||
Sbjct: 144028 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 144087

                                                                          
Query: 103    cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
              || ||||||||||||||||||||||||| ||||   || |||||||||||||||||| ||
Sbjct: 144088 cccggcgaactgaaacatcttagtagccggaggaggaa-aaagcaaaagcgattccccta 144146

                                                                          
Query: 163    gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
              ||| ||||||| |||| ||||  ||||||||||||||| |||||||||||||||||  ||
Sbjct: 144147 gtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgat 144206

                                                                          
Query: 223    acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
                  || | ||  | ||||||||||| ||||||||| |||||| ||||||  | ||||||
Sbjct: 144207 gagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtcca 144266

                                                                          
Query: 283    gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
              ||||||| ||| |   |||||| | ||||  |||| ||||||||||||||||   |||||
Sbjct: 144267 gtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcc 144326

                                                                          
Query: 343    cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 402
              ||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 144327 cgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaa 144386

                                                                          
Query: 403    gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 462
              | ||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||
Sbjct: 144387 gcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 144446

                                                                          
Query: 463    ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 522
              |||    ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||
Sbjct: 144447 ccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaa 144503

                                           
Query: 523    gaatgagccggcgactcataggcagtggc 551
              ||||||||||||||||  ||||| |||||
Sbjct: 144504 gaatgagccggcgacttgtaggcggtggc 144532



 Score =  428 bits (216), Expect = e-117
 Identities = 437/509 (85%), Gaps = 4/509 (0%)
 Strand = Plus / Minus

                                                                         
Query: 43    attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
             |||||| ||||||| ||||||  |||||||||||||||| ||  ||||| ||||||||||
Sbjct: 88823 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 88764

                                                                         
Query: 103   cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
             || ||||||||||||||||||||||||| ||||   || |||||||||||||||||| ||
Sbjct: 88763 cccggcgaactgaaacatcttagtagccggaggaggaa-aaagcaaaagcgattccccta 88705

                                                                         
Query: 163   gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
             ||| ||||||| |||| ||||  ||||||||||||||| |||||||||||||||||  ||
Sbjct: 88704 gtaacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgat 88645

                                                                         
Query: 223   acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
                 || | ||  | ||||||||||| ||||||||| |||||| ||||||  | ||||||
Sbjct: 88644 gagggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtcca 88585

                                                                         
Query: 283   gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 342
             ||||||| ||| |   |||||| | ||||  |||| ||||||||||||||||   |||||
Sbjct: 88584 gtagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcc 88525

                                                                         
Query: 343   cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 402
             ||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 88524 cgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaa 88465

                                                                         
Query: 403   gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 462
             | ||||||||||||||||||||||||||||||||   ||| ||||||||||||| |||||
Sbjct: 88464 gcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 88405

                                                                         
Query: 463   ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 522
             |||    ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||
Sbjct: 88404 ccg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaa 88348

                                          
Query: 523   gaatgagccggcgactcataggcagtggc 551
             ||||||||||||||||  ||||| |||||
Sbjct: 88347 gaatgagccggcgacttgtaggcggtggc 88319

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  424 bits (214), Expect = e-115
 Identities = 410/472 (86%), Gaps = 9/472 (1%)
 Strand = Plus / Minus

                                                                          
Query: 91     ggcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaa 150
              |||||||||| ||| ||||||| ||||||||  | ||||| | || || |||| ||||||
Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgg-gggaagagaaggcaaaa 139056

                                                                          
Query: 151    gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 210
              |||||||||| ||||||||||||||||  ||||| |||||||||||||  ||||||||||
Sbjct: 139055 gcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttg 138996

                                                                          
Query: 211    tgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 266
              ||||||||| |||     ||| ||||||||| |||| |||||||| |||| ||||| || 
Sbjct: 138995 tgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccc 138937

                                                                          
Query: 267    agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 326
              ||| || || ||||| ||||||| ||||| |||  ||||| |||||||||||||||||||
Sbjct: 138936 agacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcat 138877

                                                                          
Query: 327    ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
              |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||
Sbjct: 138876 ggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctg 138817

                                                                          
Query: 387    ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
              |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||
Sbjct: 138816 ggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 138757

                                                                          
Query: 447    gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 506
              |||||||||| ||||||||   | ||||||| |||||||||||| |||   |||||||||
Sbjct: 138756 gaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctga 138700

                                                                  
Query: 507    ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              |||||||||||||||||||||||||||||||| |||||| | ||| ||||||
Sbjct: 138699 ccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtta 138648



 Score =  424 bits (214), Expect = e-115
 Identities = 410/472 (86%), Gaps = 9/472 (1%)
 Strand = Plus / Plus

                                                                         
Query: 91    ggcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaa 150
             |||||||||| ||| ||||||| ||||||||  | ||||| | || || |||| ||||||
Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgg-gggaagagaaggcaaaa 82821

                                                                         
Query: 151   gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 210
             |||||||||| ||||||||||||||||  ||||| |||||||||||||  ||||||||||
Sbjct: 82822 gcgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttg 82881

                                                                         
Query: 211   tgggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccct 266
             ||||||||| |||     ||| ||||||||| |||| |||||||| |||| ||||| || 
Sbjct: 82882 tgggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccc 82940

                                                                         
Query: 267   agatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcat 326
             ||| || || ||||| ||||||| ||||| |||  ||||| |||||||||||||||||||
Sbjct: 82941 agacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcat 83000

                                                                         
Query: 327   ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
             |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||
Sbjct: 83001 ggggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctg 83060

                                                                         
Query: 387   ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
             |||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| |||
Sbjct: 83061 ggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagt 83120

                                                                         
Query: 447   gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctga 506
             |||||||||| ||||||||   | ||||||| |||||||||||| |||   |||||||||
Sbjct: 83121 gaaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctga 83177

                                                                 
Query: 507   ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
             |||||||||||||||||||||||||||||||| |||||| | ||| ||||||
Sbjct: 83178 ccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtta 83229

---

>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA,
            and Ala-tRNA genes
          Length = 3022

 Score =  418 bits (211), Expect = e-114
 Identities = 330/360 (91%), Gaps = 10/360 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaa-ataggtcaa 59
            |||||||||||| |||||||||||||| ||| ||||||  | |||||| | |||||||||
Sbjct: 2670 aatgcttcgggg-agttgaaaataagcgtag-atccgg--ggattcccgatataggtcaa 2725

                                                                        
Query: 60   ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119
            |||||  |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||
Sbjct: 2726 cctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaaca 2784

                                                                        
Query: 120  tcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2785 tcttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 2843

                                                                        
Query: 180  gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
            |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 2844 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 2903

                                                                        
Query: 240  aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
            ||||||||| |  |||  ||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 2904 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 2963

                                                                        
Query: 298  actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
            ||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2964 act-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022

---

>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA
          Length = 1277

 Score =  418 bits (211), Expect = e-114
 Identities = 330/360 (91%), Gaps = 10/360 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaa-ataggtcaa 59
            |||||||||||| |||||||||||||| ||| ||||||  | |||||| | |||||||||
Sbjct: 925  aatgcttcgggg-agttgaaaataagcgtag-atccgg--ggattcccgatataggtcaa 980

                                                                        
Query: 60   ccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaaca 119
            |||||  |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||
Sbjct: 981  cctttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaaca 1039

                                                                        
Query: 120  tcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 179
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 tcttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 1098

                                                                        
Query: 180  gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 239
            |||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 1099 gggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgct 1158

                                                                        
Query: 240  aggcgaagcggttgag--tgccgcaccctagatggctaaagtccagtagccgaaagcatc 297
            ||||||||| |  |||  ||| |||||||||||||| | |||||||||||||||||||||
Sbjct: 1159 aggcgaagcagcagagaatgctgcaccctagatggcgagagtccagtagccgaaagcatc 1218

                                                                        
Query: 298  actagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 357
            ||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1219 act-gcttacgctctgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277

---

>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence
          Length = 282

 Score =  416 bits (210), Expect = e-113
 Identities = 264/280 (94%), Gaps = 4/280 (1%)
 Strand = Plus / Plus

                                                                       
Query: 275 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 334
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3   aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62

                                                                       
Query: 335 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122

                                                                       
Query: 395 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 454
           ||||||||||||||||||||||||| |||||||||||||||||  ||| |||||||||||
Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182

                                                                       
Query: 455 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 514
           || ||||||||   | ||||||||||||||||||||||   | |  ||||||||||||||
Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238

                                                   
Query: 515 ctgttgaagaatgagccggcgactcataggcagtggcttg 554
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278

---

>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence
          Length = 249

 Score =  404 bits (204), Expect = e-109
 Identities = 238/248 (95%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 151 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 210
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1   gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60

                                                                       
Query: 211 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 269
           |||||||||||||||||||| ||||||||||||||||| |   || ||| ||||||||||
Sbjct: 61  tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120

                                                                       
Query: 270 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 329
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180

                                                                       
Query: 330 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 389
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240

                   
Query: 390 gaccgata 397
           ||||||||
Sbjct: 241 gaccgata 248

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score =  396 bits (200), Expect = e-107
 Identities = 292/320 (91%), Gaps = 2/320 (0%)
 Strand = Plus / Minus

                                                                        
Query: 53   aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 112
            |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637

                                                                        
Query: 113  tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
            ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||| || |||
Sbjct: 3636 tgaaatatcttagtagccagagg-aaaagaaagcaaaagtgattcccgtagtaacgacga 3578

                                                                        
Query: 173  gcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttg 232
            | ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| |
Sbjct: 3577 gtgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtag 3518

                                                                        
Query: 233  tgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaa 292
            ||| ||||||| ||||||| |||||  |||||||||||||| | |||  |||||||||||
Sbjct: 3517 tgccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaa 3458

                                                                        
Query: 293  gcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatc 352
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 3457 gcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatt 3398

                                
Query: 353  agcaaggaccaccttgcaag 372
            ||||||||||||||||||||
Sbjct: 3397 agcaaggaccaccttgcaag 3378



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 440
            ||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||  |
Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306

                                    
Query: 441  ggtagtgaaatagaacgtgaaacc 464
            || ||||||||||||  |||||||
Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 55/58 (94%)
 Strand = Plus / Minus

                                                                      
Query: 501  ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
            |||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggtta 3192

---

>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full
           insert sequence
          Length = 1091

 Score =  369 bits (186), Expect = 7e-99
 Identities = 224/230 (97%), Gaps = 5/230 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 69  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 124

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243

                                                             
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293

---

>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full
           insert sequence
          Length = 1091

 Score =  369 bits (186), Expect = 7e-99
 Identities = 224/230 (97%), Gaps = 5/230 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 69  aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 124

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cttttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 184

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 243

                                                             
Query: 181 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 230
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293

---

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score =  359 bits (181), Expect = 6e-96
 Identities = 290/317 (91%), Gaps = 7/317 (2%)
 Strand = Plus / Plus

                                                                          
Query: 1      aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
              |||||||||||| |||||||||| ||||||| |||||| || |||||| |||||| ||||
Sbjct: 177102 aatgcttcgggg-agttgaaaatcagcatag-atccgg-ag-attcccgaatagggcaac 177157

                                                                          
Query: 61     cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
              ||||  |||||| ||||||||||||| |||||||||||| |||| |||||||||||| ||
Sbjct: 177158 ctttcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagat 177216

                                                                          
Query: 121    cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
              ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 177217 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatg 177275

                                                                          
Query: 181    ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgcta 240
              ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 177276 ggagctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagcta 177335

                                                                          
Query: 241    ggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 299
              |||||||| |   || ||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 177336 ggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcac 177395

                               
Query: 300    tagcttatgctctgacc 316
              ||||||| |||||||||
Sbjct: 177396 tagcttaggctctgacc 177412



 Score =  115 bits (58), Expect = 2e-22
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                        
Query: 501    ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 177462



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
              |||||||||||| |  ||||||||||||||||||||||||||||||
Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                           
Query: 389   tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
             |||||||||||| |  ||||||||||||||||||||||||||||||
Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 107    gcgaactgaaacatcttagtagc 129
              |||||||||||||||||||||||
Sbjct: 417776 gcgaactgaaacatcttagtagc 417798



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 107   gcgaactgaaacatcttagtagc 129
             |||||||||||||||||||||||
Sbjct: 67026 gcgaactgaaacatcttagtagc 67048

---

>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041
          Length = 226

 Score =  355 bits (179), Expect = 1e-94
 Identities = 200/207 (96%)
 Strand = Plus / Plus

                                                                       
Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69

                                                                       
Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 70  gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129

                                                                       
Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  
Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189

                                      
Query: 440 gggtagtgaaatagaacgtgaaaccgt 466
           ||| ||||||||||||| |||||||||
Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  315 bits (159), Expect = 9e-83
 Identities = 224/245 (91%), Gaps = 3/245 (1%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||
Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           ||||  ||| ||||||||||||| ||||||||   | |||  ||||||||||||||| ||
Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554

                                                                       
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
           | |  |||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614

                
Query: 554 ggtta 558
           |||||
Sbjct: 615 ggtta 619



 Score =  170 bits (86), Expect = 3e-39
 Identities = 120/130 (92%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 127
           ||||||||||||||  ||  | ||||||||||||||||||||||||||||||||||||||
Sbjct: 122 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 181

                                                                       
Query: 128 gccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 187
           |||||||| |||||||||||||||||||||||  ||||| |||||||||||||||| |||
Sbjct: 182 gccagagg-aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacag 240

                     
Query: 188 cctaaaccgt 197
           ||||||||||
Sbjct: 241 cctaaaccgt 250

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  315 bits (159), Expect = 9e-83
 Identities = 224/245 (91%), Gaps = 3/245 (1%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||
Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           ||||  ||| ||||||||||||| ||||||||   | |||  ||||||||||||||| ||
Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567

                                                                       
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
           | |  |||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627

                
Query: 554 ggtta 558
           |||||
Sbjct: 628 ggtta 632



 Score =  170 bits (86), Expect = 3e-39
 Identities = 120/130 (92%), Gaps = 1/130 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 127
           ||||||||||||||  ||  | ||||||||||||||||||||||||||||||||||||||
Sbjct: 135 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 194

                                                                       
Query: 128 gccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 187
           |||||||| |||||||||||||||||||||||  ||||| |||||||||||||||| |||
Sbjct: 195 gccagagg-aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacag 253

                     
Query: 188 cctaaaccgt 197
           ||||||||||
Sbjct: 254 cctaaaccgt 263

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  313 bits (158), Expect = 3e-82
 Identities = 223/244 (91%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           |||  ||| ||||||||||||| ||||||||   | |||  ||||||||||||||| |||
Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672

                                                                       
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
            |  |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732

               
Query: 555 gtta 558
           ||||
Sbjct: 733 gtta 736



 Score =  168 bits (85), Expect = 1e-38
 Identities = 119/129 (92%), Gaps = 1/129 (0%)
 Strand = Plus / Plus

                                                                       
Query: 68  actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 127
           ||||||||||||||  ||  | ||||||||||||||||||||||||||||||||||||||
Sbjct: 239 actgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagta 298

                                                                       
Query: 128 gccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 187
           |||||||| |||||||||||||||||||||||  ||||| |||||||||||||||| |||
Sbjct: 299 gccagagg-aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacag 357

                    
Query: 188 cctaaaccg 196
           |||||||||
Sbjct: 358 cctaaaccg 366

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2754

 Score =  293 bits (148), Expect = 3e-76
 Identities = 240/269 (89%), Gaps = 5/269 (1%)
 Strand = Plus / Plus

                                                                       
Query: 290 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 349
           |||| |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432

                                                                       
Query: 350 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 409
           |||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||
Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492

                                                                       
Query: 410 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 469
           | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| |    |
Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549

                                                                       
Query: 470 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 529
            |||| ||||||||||||||| |  || |  |||||||||||||||||||||||||||||
Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607

                                        
Query: 530 ccggcgactcataggcagtggcttggtta 558
           ||||||||||||| | |||||| ||||||
Sbjct: 608 ccggcgactcataagtagtggcctggtta 636



 Score =  119 bits (60), Expect = 1e-23
 Identities = 154/182 (84%), Gaps = 5/182 (2%)
 Strand = Plus / Plus

                                                                       
Query: 88  gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagca 147
           |||| ||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||
Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagagg-aaaataaagca 206

                                                                       
Query: 148 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgggg 207
           ||||  |||||| |||||| ||||||||||| |||| ||||||||||||  |||| ||||
Sbjct: 207 aaagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatgggg 266

                                                                       
Query: 208 ttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 267
           ||   || |||||||| |||  ||||| |||||| |||||| || |||| | | ||||||
Sbjct: 267 tt---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaacccta 323

             
Query: 268 ga 269
           ||
Sbjct: 324 ga 325

---

>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2716

 Score =  291 bits (147), Expect = 1e-75
 Identities = 432/517 (83%), Gaps = 15/517 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| |||||||  |||||| |||| | |||||| |||| ||||||| ||
Sbjct: 109 attcccgaataggtaaaccttt--aactgc-tgcttattccatg-gcagacaagaga-aa 163

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||| ||||||||||||||||||||||||||| |||| ||||||||||  |||||| ||
Sbjct: 164 cctggtgaactgaaacatcttagtagccagagg-aaaataaagcaaaagttattcccata 222

                                                                       
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 222
           |||| ||| |  |||| |||| ||||||||| ||  |||| ||||||| ||   ||||||
Sbjct: 223 gtagtggcaaatgaaaagggaacagcctaaatcgctaaaatggggttgggg---agcaat 279

                                                                       
Query: 223 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 282
           | |||  || || |||||| || ||  || |||| | | |||||||||||  | ||||||
Sbjct: 280 aaaagtattttgttgctagacggagtagtggagttctgaaccctagatggtgagagtcca 339

                                                                       
Query: 283 gtagccgaaagcatcactagcttatgctctga-cccgagtagcatggggcacgtggaatc 341
           ||||   |||| |||| ||||||||||| | | ||||||||||||||| ||  |||||||
Sbjct: 340 gtagtataaagtatcattagcttatgcttttaacccgagtagcatgggacatatggaatc 399

                                                                       
Query: 342 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 401
           ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| ||
Sbjct: 400 ccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgaccaatagtga 459

                                                                       
Query: 402 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 461
           |||||||||||||||||| ||||||||||||||||| |||| |||||| |||||| ||||
Sbjct: 460 agtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactagaacatgaa 519

                                                                       
Query: 462 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 521
           | |    |  ||| ||||||||||||||| || || |  |||||||| |||||| |||||
Sbjct: 520 aac---atatgctaccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttga 574

                                                
Query: 522 agaatgagccggcgactcataggcagtggcttggtta 558
           |||||||| |||||||||||| | |||||| ||||||
Sbjct: 575 agaatgagtcggcgactcataagtagtggcctggtta 611

---

>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0046A04, complete sequence
          Length = 141001

 Score =  289 bits (146), Expect = 5e-75
 Identities = 195/210 (92%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                         
Query: 268   gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326
             ||||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311

                                                                         
Query: 327   ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
             |||  ||||||||||| ||||||| || ||||  ||||||||||||||||||||||||||
Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371

                                                                         
Query: 387   ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
             ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431

                                           
Query: 447   gaaatagaacgtgaaaccgtgctgagctcc 476
             ||||||||||||||||||||||||||||||
Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461

---

>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
           OSJNBa0007C02, complete sequence
          Length = 148265

 Score =  289 bits (146), Expect = 5e-75
 Identities = 195/210 (92%), Gaps = 1/210 (0%)
 Strand = Plus / Minus

                                                                       
Query: 268 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326
           ||||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878

                                                                       
Query: 327 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
           |||  ||||||||||| ||||||| || ||||  ||||||||||||||||||||||||||
Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818

                                                                       
Query: 387 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
           ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758

                                         
Query: 447 gaaatagaacgtgaaaccgtgctgagctcc 476
           ||||||||||||||||||||||||||||||
Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  289 bits (146), Expect = 5e-75
 Identities = 195/210 (92%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                            
Query: 268      gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326
                ||||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584

                                                                            
Query: 327      ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
                |||  ||||||||||| ||||||| || ||||  ||||||||||||||||||||||||||
Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644

                                                                            
Query: 387      ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
                ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704

                                              
Query: 447      gaaatagaacgtgaaaccgtgctgagctcc 476
                ||||||||||||||||||||||||||||||
Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 469     tgagctcccaagcagtgggaggggaaagtgatc 501
               |||||||||||| |||||||| |||||||||||
Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  289 bits (146), Expect = 5e-75
 Identities = 195/210 (92%), Gaps = 1/210 (0%)
 Strand = Plus / Plus

                                                                            
Query: 268      gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 326
                ||||| |||| |||||||||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991

                                                                            
Query: 327      ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 386
                |||  ||||||||||| ||||||| || ||||  ||||||||||||||||||||||||||
Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051

                                                                            
Query: 387      ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 446
                ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111

                                              
Query: 447      gaaatagaacgtgaaaccgtgctgagctcc 476
                ||||||||||||||||||||||||||||||
Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                
Query: 469     tgagctcccaagcagtgggaggggaaagtgatc 501
               |||||||||||| |||||||| |||||||||||
Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
           (rrl) gene, complete sequence; chloroplast gene for
           chloroplast product
          Length = 2875

 Score =  287 bits (145), Expect = 2e-74
 Identities = 279/323 (86%), Gaps = 3/323 (0%)
 Strand = Plus / Plus

                                                                       
Query: 236 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295
           ||||||| ||||| ||||||  | ||||| |||||||  | |||||||||  | ||||||
Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361

                                                                       
Query: 296 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355
           |  ||| ||| |||||  |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421

                                                                       
Query: 356 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415
            |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481

                                                                       
Query: 416 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475
           ||||||||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| 
Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538

                                                                       
Query: 476 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535
            |||||||||||||| |||    |||||||||||||||||||||||||||||||||||||
Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598

                                  
Query: 536 actcataggcagtggcttggtta 558
           ||| |||||||||||| ||||||
Sbjct: 599 acttataggcagtggcgtggtta 621



 Score =  186 bits (94), Expect = 5e-44
 Identities = 134/146 (91%), Gaps = 1/146 (0%)
 Strand = Plus / Plus

                                                                       
Query: 74  tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 133
           ||||||||||||  ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200

                                                                       
Query: 134 ggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           || |||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 201 gg-aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 259

                                     
Query: 194 ccgtgaaaacggggttgtgggagagc 219
           ||| |||| |||||||||||||||||
Sbjct: 260 ccgcgaaagcggggttgtgggagagc 285

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  287 bits (145), Expect = 2e-74
 Identities = 279/323 (86%), Gaps = 3/323 (0%)
 Strand = Plus / Minus

                                                                          
Query: 236    tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295
              ||||||| ||||| ||||||  | ||||| |||||||  | |||||||||  | ||||||
Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904

                                                                          
Query: 296    tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355
              |  ||| ||| |||||  |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844

                                                                          
Query: 356    aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415
               |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784

                                                                          
Query: 416    ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475
              ||||||||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| 
Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727

                                                                          
Query: 476    ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535
               |||||||||||||| |||    |||||||||||||||||||||||||||||||||||||
Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667

                                     
Query: 536    actcataggcagtggcttggtta 558
              ||| |||||||||||| ||||||
Sbjct: 124666 acttataggcagtggcgtggtta 124644



 Score =  287 bits (145), Expect = 2e-74
 Identities = 279/323 (86%), Gaps = 3/323 (0%)
 Strand = Plus / Plus

                                                                         
Query: 236   tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 295
             ||||||| ||||| ||||||  | ||||| |||||||  | |||||||||  | ||||||
Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962

                                                                         
Query: 296   tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 355
             |  ||| ||| |||||  |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022

                                                                         
Query: 356   aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 415
              |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| |||
Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082

                                                                         
Query: 416   ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 475
             ||||||||||||||||||||||  ||| ||||||||||||| ||||| ||   | |||| 
Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139

                                                                         
Query: 476   ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 535
              |||||||||||||| |||    |||||||||||||||||||||||||||||||||||||
Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199

                                    
Query: 536   actcataggcagtggcttggtta 558
             ||| |||||||||||| ||||||
Sbjct: 95200 acttataggcagtggcgtggtta 95222



 Score =  186 bits (94), Expect = 5e-44
 Identities = 134/146 (91%), Gaps = 1/146 (0%)
 Strand = Plus / Minus

                                                                          
Query: 74     tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 133
              ||||||||||||  ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065

                                                                          
Query: 134    ggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
              || |||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 125064 gg-aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 125006

                                        
Query: 194    ccgtgaaaacggggttgtgggagagc 219
              ||| |||| |||||||||||||||||
Sbjct: 125005 ccgcgaaagcggggttgtgggagagc 124980



 Score =  186 bits (94), Expect = 5e-44
 Identities = 134/146 (91%), Gaps = 1/146 (0%)
 Strand = Plus / Plus

                                                                         
Query: 74    tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 133
             ||||||||||||  ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801

                                                                         
Query: 134   ggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
             || |||||||||||||||||||||||  ||||||||||||||||| |||| |||||||||
Sbjct: 94802 gg-aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 94860

                                       
Query: 194   ccgtgaaaacggggttgtgggagagc 219
             ||| |||| |||||||||||||||||
Sbjct: 94861 ccgcgaaagcggggttgtgggagagc 94886

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  283 bits (143), Expect = 3e-73
 Identities = 220/245 (89%), Gaps = 3/245 (1%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           |||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||
Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           |||   ||| ||||||||||||| ||||||||   | |||   |||||||||||||| ||
Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513

                                                                       
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
           |    |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |
Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573

                
Query: 554 ggtta 558
           |||||
Sbjct: 574 ggtta 578



 Score =  145 bits (73), Expect = 2e-31
 Identities = 95/101 (94%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcga 174

                                                    
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
           |||||  ||||| |||||||||||||||| |||||||||||
Sbjct: 175 ttccctcagtagtggcgagcgaaatgggaacagcctaaacc 215

---

>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3,
             complete sequence
          Length = 121331

 Score =  283 bits (143), Expect = 3e-73
 Identities = 200/213 (93%), Gaps = 6/213 (2%)
 Strand = Plus / Minus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||  || |||||| |||||||||||
Sbjct: 79699 aatgcttcgggg-agttgaaaataagcatag-atccg--aggattcccgaataggtcaac 79644

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             ||||  |||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 79643 ctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacat 79585

                                                                         
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79584 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 79526

                                              
Query: 181   ggagcagcctaaaccgtgaaaacggggttgtgg 213
             ||| |||||||||||||||||||||||||||||
Sbjct: 79525 ggaacagcctaaaccgtgaaaacggggttgtgg 79493

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2571

 Score =  281 bits (142), Expect = 1e-72
 Identities = 219/244 (89%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| |
Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           |||  ||| ||||||||||||| |||||||||    ||||  |||||||||||||| |  
Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554

                                                                       
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
             |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614

               
Query: 555 gtta 558
           ||||
Sbjct: 615 gtta 618



 Score =  137 bits (69), Expect = 4e-29
 Identities = 94/101 (93%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagagg-aaaagaaagcaaaagcga 207

                                                    
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
           ||||| |||||||||||||||||| |||| ||| |||||||
Sbjct: 208 ttcccttagtagcggcgagcgaaaggggaacagtctaaacc 248

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  281 bits (142), Expect = 1e-72
 Identities = 219/244 (89%), Gaps = 3/244 (1%)
 Strand = Plus / Minus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| |
Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165

                                                                          
Query: 435    ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
              |||  ||| ||||||||||||| |||||||||    ||||  |||||||||||||| |  
Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108

                                                                          
Query: 495    agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
                |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048

                  
Query: 555    gtta 558
              ||||
Sbjct: 115047 gtta 115044



 Score =  281 bits (142), Expect = 1e-72
 Identities = 219/244 (89%), Gaps = 3/244 (1%)
 Strand = Plus / Plus

                                                                         
Query: 315   cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
             |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| |
Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763

                                                                         
Query: 375   taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823

                                                                         
Query: 435   ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
             |||  ||| ||||||||||||| |||||||||    ||||  |||||||||||||| |  
Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880

                                                                         
Query: 495   agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
               |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |
Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940

                 
Query: 555   gtta 558
             ||||
Sbjct: 86941 gtta 86944



 Score =  137 bits (69), Expect = 4e-29
 Identities = 94/101 (93%), Gaps = 1/101 (0%)
 Strand = Plus / Minus

                                                                          
Query: 95     agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
              ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagagg-aaaagaaagcaaaagcga 115456

                                                       
Query: 155    ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
              ||||| |||||||||||||||||| |||| ||| |||||||
Sbjct: 115455 ttcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415



 Score =  137 bits (69), Expect = 4e-29
 Identities = 94/101 (93%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                         
Query: 95    agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
             ||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagagg-aaaagaaagcaaaagcga 86532

                                                      
Query: 155   ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
             ||||| |||||||||||||||||| |||| ||| |||||||
Sbjct: 86533 ttcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573

---

>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1109A06
          Length = 171438

 Score =  281 bits (142), Expect = 1e-72
 Identities = 148/150 (98%)
 Strand = Plus / Minus

                                                                          
Query: 409    ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 468
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991

                                                                          
Query: 469    tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 528
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931

                                            
Query: 529    gccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||
Sbjct: 107930 gccggcgactcataggcagtggcttggtta 107901

---

>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA
           (rrnL) gene
          Length = 6393

 Score =  268 bits (135), Expect = 2e-68
 Identities = 219/244 (89%), Gaps = 6/244 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           || | ||| ||||||||||||| ||||||||| |   |||  ||||||||||||  ||||
Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584

                                                                       
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
           |  ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643

               
Query: 555 gtta 558
           ||||
Sbjct: 644 gtta 647



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 87/101 (86%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||| ||||| || ||| ||||||||||||||| || |||| ||||||||||||| |||
Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggagg-aaaagaaagcaaacgcg 206

                                                    
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaac 194
           ||| ||  ||||||||||||||||| || | ||||||||||
Sbjct: 207 atttcctgagtagcggcgagcgaaacggaatcagcctaaac 247

---

>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2619

 Score =  268 bits (135), Expect = 2e-68
 Identities = 219/244 (89%), Gaps = 6/244 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           || | ||| |||||||||||||| |||||||| |   |||  ||||||||||||  ||||
Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545

                                                                       
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
              ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604

               
Query: 555 gtta 558
           ||||
Sbjct: 605 gtta 608



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 76/84 (90%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||||||||| || ||| ||||||||||||||| || |||| |||||||||||||||||
Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggagg-aaaagaaagcaaaagcg 198

                                   
Query: 154 attcccgtagtagcggcgagcgaa 177
           ||| || |||||||||||||||||
Sbjct: 199 atttccttagtagcggcgagcgaa 222

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  264 bits (133), Expect = 3e-67
 Identities = 258/299 (86%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                        
Query: 260  gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319
            |||||||||| ||  |||||||||||| |||||||| ||| |||||  ||||| |||| |
Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429

                                                                        
Query: 320  gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379
            |||||||||| |||| | ||||| ||||||||  || |||||||||| | ||||||||||
Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489

                                                                        
Query: 380  actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439
            |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||  
Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549

                                                                        
Query: 440  gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499
            ||| ||||||| ||||| ||||||||   |  ||   |||||||||||||| |||    |
Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606

                                                                       
Query: 500  tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/100 (93%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                        
Query: 94   aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
            |||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 4193 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaa-aaagcaaaagcg 4251

                                                    
Query: 154  attcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
            ||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 4252 attccctgagtagcggcgagcgaaatgggagaagcctaaa 4291

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3257

 Score =  264 bits (133), Expect = 3e-67
 Identities = 258/299 (86%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319
           |||||||||| ||  |||||||||||| |||||||| ||| |||||  ||||| |||| |
Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396

                                                                       
Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379
           |||||||||| |||| | ||||| ||||||||  || |||||||||| | ||||||||||
Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456

                                                                       
Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439
           |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||  
Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516

                                                                       
Query: 440 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499
           ||| ||||||| ||||| ||||||||   |  ||   |||||||||||||| |||    |
Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573

                                                                      
Query: 500 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/100 (93%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           |||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaa-aaagcaaaagcg 218

                                                   
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           ||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 219 attccctgagtagcggcgagcgaaatgggagaagcctaaa 258

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  264 bits (133), Expect = 3e-67
 Identities = 258/299 (86%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 260 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 319
           |||||||||| ||  |||||||||||| |||||||| ||| |||||  ||||| |||| |
Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396

                                                                       
Query: 320 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 379
           |||||||||| |||| | ||||| ||||||||  || |||||||||| | ||||||||||
Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456

                                                                       
Query: 380 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 439
           |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||  
Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516

                                                                       
Query: 440 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 499
           ||| ||||||| ||||| ||||||||   |  ||   |||||||||||||| |||    |
Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573

                                                                      
Query: 500 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/100 (93%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           |||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 160 aagagagaacctggtgaactgaaacatcttagtagccagaggaaaaa-aaagcaaaagcg 218

                                                   
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           ||||||  ||||||||||||||||||||||| ||||||||
Sbjct: 219 attccctgagtagcggcgagcgaaatgggagaagcctaaa 258

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2691

 Score =  254 bits (128), Expect = 3e-64
 Identities = 220/250 (88%), Gaps = 3/250 (1%)
 Strand = Plus / Plus

                                                                       
Query: 309 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 368
           |||| |||||||||||||| |||||||| || |  |||||||||||| |||||||||| |
Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397

                                                                       
Query: 369 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 428
            ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457

                                                                       
Query: 429 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 488
           ||||||||| |||| |||||||||||   ||||||||   | |||   ||||||||||||
Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514

                                                                       
Query: 489 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 548
           ||  ||  | || ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574

                     
Query: 549 ggcttggtta 558
           ||| ||||||
Sbjct: 575 ggcctggtta 584



 Score =  125 bits (63), Expect = 2e-25
 Identities = 88/95 (92%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 101 aacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccg 160
           ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 125 aacctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaaagcgatttcct 183

                                              
Query: 161 tagtagcggcgagcgaaatgggagcagcctaaacc 195
           |||||| ||||||||||| || | |||||||||||
Sbjct: 184 tagtagtggcgagcgaaacggaatcagcctaaacc 218

---

>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome
          Length = 452528

 Score =  246 bits (124), Expect = 7e-62
 Identities = 162/168 (96%), Gaps = 5/168 (2%)
 Strand = Plus / Plus

                                                                         
Query: 1     aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
             |||||||||||| |||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 75837 aatgcttcgggg-agttgaaaataagcatag-atccgg-ag-attcccaaataggtcaac 75892

                                                                         
Query: 61    cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
             |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75893 cttttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacat 75952

                                                             
Query: 121   cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
             ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 75953 cttagtagccagagg-aaaagaaagcaaaagcgattcccgtagtagcg 75999



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                             
Query: 389    tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 435
              |||||||||||| |  |||||||||||||||||||||||||||||||
Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ggcgaactgaaacatcttag 125
              ||||||||||||||||||||
Sbjct: 320856 ggcgaactgaaacatcttag 320837

---

>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence
          Length = 329

 Score =  240 bits (121), Expect = 4e-60
 Identities = 145/153 (94%)
 Strand = Plus / Minus

                                                                       
Query: 243 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 302
           |||||| || || ||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270

                                                                       
Query: 303 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 362
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210

                                            
Query: 363 accttgcaaggctaaatactcctgggtgaccga 395
           |||||||||||||||||||||||| | ||||||
Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score =  240 bits (121), Expect = 4e-60
 Identities = 209/237 (88%), Gaps = 6/237 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||  | |||||||||| | |||||
Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||
Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           |||  ||| ||||||| ||||| |||||||||    ||||  |||||||||||||||| |
Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574

                                                                    
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |   | | |||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628



 Score =  107 bits (54), Expect = 4e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           |||| |||||| | ||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtgg-aaaagaaagcaaaagcga 207

                                                     
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||||  |||||||||||||| || |||| ||||||||||||
Sbjct: 208 ttccctgagtagcggcgagcggaaagggaacagcctaaaccg 249

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score =  240 bits (121), Expect = 4e-60
 Identities = 209/237 (88%), Gaps = 6/237 (2%)
 Strand = Plus / Plus

                                                                        
Query: 315  cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
            |||||||||||||||||||||| |||||||||||||||  | |||||||||| | |||||
Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226

                                                                        
Query: 375  taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
            |||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||
Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286

                                                                        
Query: 435  ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
            |||  ||| ||||||| ||||| |||||||||    ||||  |||||||||||||||| |
Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343

                                                                     
Query: 495  agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
            |   | | |||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397



 Score =  107 bits (54), Expect = 4e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                        
Query: 95   agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
            |||| |||||| | ||||||||||||||||||||| || || ||||||||||||||||||
Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtgg-aaaagaaagcaaaagcga 1973

                                                      
Query: 155  ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
            |||||  |||||||||||||| || |||| ||||||||||||
Sbjct: 1974 ttccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3349

 Score =  240 bits (121), Expect = 4e-60
 Identities = 219/251 (87%), Gaps = 3/251 (1%)
 Strand = Plus / Plus

                                                                       
Query: 308 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 367
           ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| 
Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439

                                                                       
Query: 368 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 427
           ||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||||||
Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499

                                                                       
Query: 428 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 487
           ||||||||||  ||| ||||||| ||||| ||||||||   |  |||  |||||||||||
Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556

                                                                       
Query: 488 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 547
           ||  |||  | |||| ||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616

                      
Query: 548 tggcttggtta 558
           ||||| |||||
Sbjct: 617 tggctgggtta 627



 Score =  135 bits (68), Expect = 2e-28
 Identities = 93/100 (93%), Gaps = 1/100 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 161 aagagacaacctggtgaactgaaacatcttagtaaccagagg-aaaagaaagcaaaagcg 219

                                                   
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           ||| ||  ||||||||||||||||||||||| ||||||||
Sbjct: 220 atttcctgagtagcggcgagcgaaatgggagaagcctaaa 259

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2571

 Score =  236 bits (119), Expect = 6e-59
 Identities = 214/244 (87%), Gaps = 5/244 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           ||   ||| ||||||| ||| | ||||||||   || |||  ||||||||||||||||  
Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550

                                                                       
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 554
             ||| | ||||||||||||||||||||||||||||||||||||  |||  |||||||||
Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610

               
Query: 555 gtta 558
           ||||
Sbjct: 611 gtta 614



 Score =  121 bits (61), Expect = 3e-24
 Identities = 110/125 (88%), Gaps = 1/125 (0%)
 Strand = Plus / Plus

                                                                       
Query: 72  cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 131
           |||||||||| |||  |||||  ||||  |||| || |||||||||||||||||||||| 
Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185

                                                                       
Query: 132 gaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 191
           |||| ||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||
Sbjct: 186 gagg-aaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagccta 244

                
Query: 192 aaccg 196
           |||||
Sbjct: 245 aaccg 249

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2737

 Score =  232 bits (117), Expect = 1e-57
 Identities = 180/201 (89%)
 Strand = Plus / Plus

                                                                       
Query: 262 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 321
           |||||||||||  | ||||||||||   |||| |||| ||||||||||| |||| |||||
Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391

                                                                       
Query: 322 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 381
           |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451

                                                                       
Query: 382 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 441
           || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | |||
Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511

                                
Query: 442 gtagtgaaatagaacgtgaaa 462
           | ||||||||||||| |||||
Sbjct: 512 ggagtgaaatagaacatgaaa 532



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 178/210 (84%), Gaps = 8/210 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgcttcggggnagttgaaaataagcatagnatccggnagnattcccaaataggtcaac 60
           |||||||||||| |||| ||||||| ||||| |||||| || |||||| ||||||| |||
Sbjct: 70  aatgcttcgggg-agttaaaaataaacatag-atccgg-ag-attcccgaataggtaaac 125

                                                                       
Query: 61  cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 120
           |||| ||||||| |||| | |||||| |||| ||| ||| ||||||| |||||||| |||
Sbjct: 126 ctttaaaactgc-tgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcat 182

                                                                       
Query: 121 cttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatg 180
           |||||||| |||||| |||| ||||||||||  ||| || |||||| |||||| |||| |
Sbjct: 183 cttagtagacagagg-aaaataaagcaaaagttattaccatagtagtggcgagtgaaaag 241

                                         
Query: 181 ggagcagcctaaaccgtgaaaacggggttg 210
           ||| ||||||||||||  |||| |||||||
Sbjct: 242 ggaacagcctaaaccgctaaaatggggttg 271



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggtta 623

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2622

 Score =  230 bits (116), Expect = 4e-57
 Identities = 215/245 (87%), Gaps = 6/245 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 433
           ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           ||  | ||| ||||||| ||||| |||||||   || ||||  ||||||||||||  |||
Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529

                                                                       
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
              | |  |||||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589

                
Query: 554 ggtta 558
           |||||
Sbjct: 590 ggtta 594



 Score =  109 bits (55), Expect = 1e-20
 Identities = 86/95 (90%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 caacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattccc 159
           ||||| || ||| |||||||||||||||||| |||| ||||||||||||| |||||||||
Sbjct: 64  caacccggtgaattgaaacatcttagtagccggagg-aaaagaaagcaaacgcgattccc 122

                                              
Query: 160 gtagtagcggcgagcgaaatgggagcagcctaaac 194
            |||||||||||||||||| |||| ||||||||||
Sbjct: 123 ctagtagcggcgagcgaaaagggaacagcctaaac 157

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  228 bits (115), Expect = 2e-56
 Identities = 213/245 (86%), Gaps = 3/245 (1%)
 Strand = Plus / Plus

                                                                        
Query: 314  acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
            |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | ||||
Sbjct: 784  acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843

                                                                        
Query: 374  ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
            |||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||
Sbjct: 844  ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903

                                                                        
Query: 434  cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
            ||||  ||| |||||||||||   ||||||||   | ||||  |||||||||||||  ||
Sbjct: 904  cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960

                                                                        
Query: 494  aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
            |  | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |
Sbjct: 961  atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020

                 
Query: 554  ggtta 558
            |||||
Sbjct: 1021 ggtta 1025



 Score =  141 bits (71), Expect = 3e-30
 Identities = 136/155 (87%), Gaps = 2/155 (1%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| |||||| |||||| | ||||||| |||||||| |||  ||  | |||||||||
Sbjct: 511 attcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaa 569

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           ||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||| ||
Sbjct: 570 cctggtgaactgaaacatcttagtaaccagagg-aacagaaagcaaaagcgattccctta 628

                                              
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccgt 197
           |||| ||||||||||| |||| |||||||||||||
Sbjct: 629 gtagtggcgagcgaaacgggaacagcctaaaccgt 663

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 503 atgaaa 508



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||| ||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 121/142 (85%), Gaps = 4/142 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                 
Query: 163 gtagcggcgagcgaaatgggag 184
           |||| ||||| ||||| |||||
Sbjct: 225 gtagtggcgaacgaaaagggag 246



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2696

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 503 atgaaa 508



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 128/150 (85%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || |||||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggcgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  218 bits (110), Expect = 1e-53
 Identities = 167/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 127/150 (84%), Gaps = 4/150 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                         
Query: 163 gtagcggcgagcgaaatgggagcagcctaa 192
           |||| ||||| ||||| |||| || |||||
Sbjct: 225 gtagtggcgaacgaaaagggaacaacctaa 254



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2888

 Score =  218 bits (110), Expect = 1e-53
 Identities = 208/240 (86%), Gaps = 3/240 (1%)
 Strand = Plus / Plus

                                                                       
Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378
           ||||| ||||| |||||| |||||| | ||||||  |||||||||||||| |||||||||
Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444

                                                                       
Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438
           |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| 
Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504

                                                                       
Query: 439 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 498
            ||| ||||||||||||| |||||||    | ||||  |||||||||||||| | |    
Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561

                                                                       
Query: 499 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           | || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621



 Score =  137 bits (69), Expect = 4e-29
 Identities = 109/121 (90%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||| ||||| | ||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagagg-aaaagaaagcaaaagcga 220

                                                                       
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 214
           |||||  ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||
Sbjct: 221 ttccctcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggg 280

            
Query: 215 a 215
           |
Sbjct: 281 a 281

---

>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL)
           gene
          Length = 5569

 Score =  214 bits (108), Expect = 2e-52
 Identities = 206/237 (86%), Gaps = 5/237 (2%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |
Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| | ||||||||||||| |||||| | || |||||||||||||||||||
Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           ||   ||| ||||||||||||| ||||| ||   ||||||  ||||||||||||  ||| 
Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691

                                                                    
Query: 495 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
             |||  ||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748



 Score =  115 bits (58), Expect = 2e-22
 Identities = 83/90 (92%), Gaps = 1/90 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||| |||||||| |||||||||||||| |||||||||||| | ||||| |||||||||
Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagagg-agaagaacgcaaaagcg 206

                                         
Query: 154 attcccgtagtagcggcgagcgaaatggga 183
           |||||| |||||||||||||||||||||||
Sbjct: 207 attcccttagtagcggcgagcgaaatggga 236

---

>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 6750

 Score =  212 bits (107), Expect = 9e-52
 Identities = 213/246 (86%), Gaps = 8/246 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||| |||| |||| ||||||||||||||
Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 492
           |    ||| ||||||||||||| ||||||||| |   |||  |||||||||||||||  |
Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563

                                                                       
Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552
           |||   ||  |||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620

                 
Query: 553 tggtta 558
           ||||||
Sbjct: 621 tggtta 626



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 176 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 234

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 235 gcgagcgaaccgggatcagcctaaacc 261

---

>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2920

 Score =  212 bits (107), Expect = 9e-52
 Identities = 140/151 (92%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||
Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720

                                          
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccg 465
           ||  |||| ||||||||||||| ||||||||
Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751



 Score =  123 bits (62), Expect = 7e-25
 Identities = 96/106 (90%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  aggcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaa 149
           |||||||||| |||| || |||||||||||||| ||||||| |||| |||||||||||||
Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggagg-aaaagaaagcaaa 194

                                                         
Query: 150 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
            ||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 195 cgcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538
           ||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831

---

>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1
          Length = 1282

 Score =  212 bits (107), Expect = 9e-52
 Identities = 213/246 (86%), Gaps = 8/246 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||| |||| |||| ||||||||||||||
Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 492
           |    ||| ||||||||||||| ||||||||| |   |||  |||||||||||||||  |
Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563

                                                                       
Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552
           |||   ||  |||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620

                 
Query: 553 tggtta 558
           ||||||
Sbjct: 621 tggtta 626



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 176 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 234

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 235 gcgagcgaaccgggatcagcctaaacc 261

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  210 bits (106), Expect = 4e-51
 Identities = 166/186 (89%)
 Strand = Plus / Plus

                                                                       
Query: 277 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 336
           ||||||||||   |||| |||| ||||||||||| |||||||||||||||||| ||||  
Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383

                                                                       
Query: 337 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 396
           ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| ||
Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443

                                                                       
Query: 397 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 456
           || |||||||||||||||||||| ||||||||||||||  | |||| |||||||||||||
Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503

                 
Query: 457 gtgaaa 462
            |||||
Sbjct: 504 atgaaa 509



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 121/142 (85%), Gaps = 4/142 (2%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| ||||||| ||||||| ||||||| |||| | |||||| | || ||||||| ||
Sbjct: 109 attcccgaataggtaaacctttaaaactgc-tgcttattccatg-gaagacaagaga-aa 165

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || || ||||||||||||||||||| ||||||| |||| ||||||||||  |||||| ||
Sbjct: 166 cccggtgaactgaaacatcttagtatccagagg-aaaataaagcaaaagttattcccata 224

                                 
Query: 163 gtagcggcgagcgaaatgggag 184
           |||| ||||| ||||| |||||
Sbjct: 225 gtagtggcgaacgaaaagggag 246



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 501 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 542
           |||||||||||||| || |||||||||||||||| |||||||
Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583

---

>gb|L43500.1|RTCCPRRNL Carteria olivieri
          Length = 5667

 Score =  206 bits (104), Expect = 6e-50
 Identities = 140/152 (92%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||
Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           ||  |||| ||||||||||||| |||||||||
Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842



 Score =  131 bits (66), Expect = 3e-27
 Identities = 97/106 (91%), Gaps = 1/106 (0%)
 Strand = Plus / Plus

                                                                       
Query: 90  aggcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaa 149
           |||||||||| |||| || |||||||||||||| ||||||| |||| |||||||||||||
Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggagg-aaaagaaagcaaa 195

                                                         
Query: 150 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
           |||||||||| |||||||||||||||||| |||| |||||||||||
Sbjct: 196 agcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538
           ||||||||||||||||||||||||||||||||||||
Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930

---

>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-CelI gene
          Length = 3779

 Score =  206 bits (104), Expect = 6e-50
 Identities = 142/152 (93%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           || || || ||||||||||||| |||||||||
Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558



 Score =  109 bits (55), Expect = 1e-20
 Identities = 77/83 (92%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 164 tgaaacatcttagtagctggagg-aaaagaaagcaaaagcgattcccgtagtagcggcga 222

                                  
Query: 173 gcgaaatgggagcagcctaaacc 195
           |||||  |||| |||||||||||
Sbjct: 223 gcgaaccgggaacagcctaaacc 245



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 47/50 (94%)
 Strand = Plus / Plus

                                                             
Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           ||||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634

---

>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-CmuI gene
          Length = 3744

 Score =  206 bits (104), Expect = 6e-50
 Identities = 207/238 (86%), Gaps = 10/238 (4%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||  |||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| ||||
Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 492
           ||  |||| ||||||||||||| ||||||||  ||||||     ||||||||||||||| 
Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610

                                                                     
Query: 493 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 550
           | |  || | |||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 78/87 (89%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||| |
Sbjct: 157 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagtg 215

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 216 gcgagcgaaccgggaacagcctaaacc 242

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2840

 Score =  202 bits (102), Expect = 9e-49
 Identities = 117/122 (95%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492

             
Query: 434 cc 435
           ||
Sbjct: 493 cc 494



 Score =  145 bits (73), Expect = 2e-31
 Identities = 98/105 (93%), Gaps = 1/105 (0%)
 Strand = Plus / Plus

                                                                       
Query: 92  gcaagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaag 151
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagagg-aaaagaaagcaaacg 205

                                                        
Query: 152 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||||||| |||||||||||||||||  ||||  |||||||||||
Sbjct: 206 cgattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 53/54 (98%)
 Strand = Plus / Plus

                                                                 
Query: 505 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 615

---

>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala,
            transfer RNA-Ile and 23S ribosomal RNA
          Length = 2305

 Score =  202 bits (102), Expect = 9e-49
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                        
Query: 319  agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378
            ||||| ||||| |||||| |||||| | |||||||||||||||||||||| |||||||||
Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211

                                                                        
Query: 379  tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271

                                      
Query: 439  tgggtagtgaaatagaacgtgaaacc 464
             ||| ||||||||||||| |||||||
Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297



 Score =  123 bits (62), Expect = 7e-25
 Identities = 107/121 (88%), Gaps = 1/121 (0%)
 Strand = Plus / Plus

                                                                        
Query: 95   agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
            ||||| ||||| | ||||||||||||||||||||| ||||| | || |||||||||||||
Sbjct: 1929 agagaaaacctagtgaactgaaacatcttagtagctagaggaataa-aaagcaaaagcga 1987

                                                                        
Query: 155  ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 214
            ||||| |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||
Sbjct: 1988 ttcccttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggg 2047

             
Query: 215  a 215
            |
Sbjct: 2048 a 2048

---

>gb|L42986.1|RTCCPRGOLA Carteria lunzensis
          Length = 4448

 Score =  198 bits (100), Expect = 1e-47
 Identities = 209/238 (87%), Gaps = 8/238 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
           |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| ||||||
Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           ||| || || ||||||||||||| ||||||||| |   |||  |||||||||||||||| 
Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615

                                                                     
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
              ||| | |||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/103 (91%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||| ||||| || ||| |||||||||||||||||| |||| |||||||||||||||||
Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggagg-aaaagaaagcaaaagcg 199

                                                      
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           ||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 200 attcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242

---

>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-ChuI gene
          Length = 4005

 Score =  198 bits (100), Expect = 1e-47
 Identities = 209/242 (86%), Gaps = 10/242 (4%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462

                                                                       
Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           || |||||||||| ||||||||||| |||  ||||||| ||||||||||||||||| |||
Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491
           |||   ||| ||||||||||||| ||||||||  ||||||     |||||||||||||||
Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577

                                                                       
Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |  |  |  | |||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635

             
Query: 552 tt 553
           ||
Sbjct: 636 tt 637



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 178 tgaaacatcttagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcggcga 236

                
Query: 173 gcgaa 177
           |||||
Sbjct: 237 gcgaa 241

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |    | | ||||||||||||| |||||||||
Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709



 Score =  117 bits (59), Expect = 4e-23
 Identities = 78/83 (93%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 160 tgaaacatcttagtagccggagg-aaaagaaagcaaaagcgattcccgtagtagcggcga 218

                                  
Query: 173 gcgaaatgggagcagcctaaacc 195
           ||||| |||||  ||||||||||
Sbjct: 219 gcgaactgggactagcctaaacc 241



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
           site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||| |
Sbjct: 175 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagtg 233

                                     
Query: 169 gcgagcgaaatgggagcagcctaaac 194
           ||||||||| ||||| ||||||||||
Sbjct: 234 gcgagcgaactgggaacagcctaaac 259



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552
           ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
           gene
          Length = 4038

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 175 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 233

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 689

---

>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 3978

 Score =  198 bits (100), Expect = 1e-47
 Identities = 141/152 (92%), Gaps = 2/152 (1%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||||||||
Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           || || || ||||||||||||| |||||||||
Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561



 Score =  109 bits (55), Expect = 1e-20
 Identities = 77/83 (92%), Gaps = 1/83 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||  |||| |||| |||||||||||||||||||||||||||||||
Sbjct: 159 tgaaacatcttagtagctggagg-aaaataaagcaaaagcgattcccgtagtagcggcga 217

                                  
Query: 173 gcgaaatgggagcagcctaaacc 195
           |||||| |||| |||||||||||
Sbjct: 218 gcgaaacgggaacagcctaaacc 240



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 46/49 (93%)
 Strand = Plus / Plus

                                                            
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 641

---

>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2863

 Score =  198 bits (100), Expect = 1e-47
 Identities = 209/242 (86%), Gaps = 10/242 (4%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443

                                                                       
Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           || |||||||||| ||||||||||| |||  ||||||| ||||||||||||||||| |||
Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491
           |||   ||| ||||||||||||| ||||||||  ||||||     |||||||||||||||
Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558

                                                                       
Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |  |  |  | |||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616

             
Query: 552 tt 553
           ||
Sbjct: 617 tt 618



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 159 tgaaacatcttagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcggcga 217

                
Query: 173 gcgaa 177
           |||||
Sbjct: 218 gcgaa 222

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Minus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
              |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871

                                              
Query: 435    ccagtgggtagtgaaatagaacgtgaaaccgt 466
              |   |||| ||||||||||||| |||||||||
Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839



 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                         
Query: 315   cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
             |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272

                                                                         
Query: 375   taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
             |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332

                                             
Query: 435   ccagtgggtagtgaaatagaacgtgaaaccgt 466
             |   |||| ||||||||||||| |||||||||
Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Minus

                                                                          
Query: 109    gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
              |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 152206 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 152148

                                         
Query: 169    gcgagcgaaatgggagcagcctaaacc 195
              |||||||||  |||| |||||||||||
Sbjct: 152147 gcgagcgaaccgggaacagcctaaacc 152121



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 109   gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
             |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 41997 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 42055

                                        
Query: 169   gcgagcgaaatgggagcagcctaaacc 195
             |||||||||  |||| |||||||||||
Sbjct: 42056 gcgagcgaaccgggaacagcctaaacc 42082



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Minus

                                                                     
Query: 504    tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 151752



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                    
Query: 504   tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
             ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 42451

---

>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1
          Length = 2524

 Score =  198 bits (100), Expect = 1e-47
 Identities = 209/242 (86%), Gaps = 10/242 (4%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462

                                                                       
Query: 375 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           || |||||||||| ||||||||||| |||  ||||||| ||||||||||||||||| |||
Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 491
           |||   ||| ||||||||||||| ||||||||  ||||||     |||||||||||||||
Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577

                                                                       
Query: 492 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |  |  |  | |||||||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635

             
Query: 552 tt 553
           ||
Sbjct: 636 tt 637



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 61/65 (93%), Gaps = 1/65 (1%)
 Strand = Plus / Plus

                                                                       
Query: 113 tgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcga 172
           |||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 178 tgaaacatcttagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcggcga 236

                
Query: 173 gcgaa 177
           |||||
Sbjct: 237 gcgaa 241

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 175 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 233

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 689

---

>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1
          Length = 1285

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545



 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 78/86 (90%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||| |
Sbjct: 175 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagtg 233

                                     
Query: 169 gcgagcgaaatgggagcagcctaaac 194
           ||||||||| ||||| ||||||||||
Sbjct: 234 gcgagcgaactgggaacagcctaaac 259



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 47/49 (95%)
 Strand = Plus / Plus

                                                            
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 552
           ||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 169 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 227

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 228 gcgagcgaaccgggaacagcctaaacc 254



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 623

---

>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene
          Length = 814

 Score =  198 bits (100), Expect = 1e-47
 Identities = 139/152 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 254 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 312

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 313 gcgagcgaaccgggaacagcctaaacc 339



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 52/55 (94%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggtta 708

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score =  196 bits (99), Expect = 5e-47
 Identities = 206/239 (86%), Gaps = 12/239 (5%)
 Strand = Plus / Minus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
              |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| ||||||
Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714

                                                                          
Query: 434    cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 492
              ||| || ||| ||||||| ||||| ||||||||   | ||||  ||||||||||||||  
Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657

                                                                         
Query: 493    aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
              ||       ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 155605



 Score =  196 bits (99), Expect = 5e-47
 Identities = 206/239 (86%), Gaps = 12/239 (5%)
 Strand = Plus / Plus

                                                                         
Query: 315   cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
             ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118

                                                                         
Query: 375   taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
             |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| ||||||
Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178

                                                                         
Query: 434   cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 492
             ||| || ||| ||||||| ||||| ||||||||   | ||||  ||||||||||||||  
Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235

                                                                        
Query: 493   aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
             ||       ||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 78287



 Score =  131 bits (66), Expect = 3e-27
 Identities = 94/102 (92%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                          
Query: 94     aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
              ||||| ||||| || |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggagg-aaaagaaagcaaaagcg 156080

                                                        
Query: 154    attcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
              ||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 156079 attcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038



 Score =  131 bits (66), Expect = 3e-27
 Identities = 94/102 (92%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                         
Query: 94    aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
             ||||| ||||| || |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggagg-aaaagaaagcaaaagcg 77812

                                                       
Query: 154   attcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
             ||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 77813 attcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene,
           partial sequence
          Length = 2446

 Score =  196 bits (99), Expect = 5e-47
 Identities = 197/229 (86%), Gaps = 3/229 (1%)
 Strand = Plus / Plus

                                                                       
Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377
           ||||||||||||||||| |||||||| ||||||||||| |||||||||| | ||||||||
Sbjct: 1   gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60

                                                                       
Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437
           ||||| ||| ||||||||||| |||  ||||||| |||||||||||||||||||||||  
Sbjct: 61  atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120

                                                                       
Query: 438 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 497
             ||| ||||||||||||| ||||||||   | ||||  ||||||||||||||   |  |
Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177

                                                            
Query: 498 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 546
            |  ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226

---

>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL)
           gene
          Length = 3669

 Score =  194 bits (98), Expect = 2e-46
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490

                                         
Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464
           |    ||| ||||||||||||| |||||||
Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/87 (88%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||||||||||  || | ||||||||||||| |||||||||  ||||| |
Sbjct: 155 gaactgaaacatcttagtagct-gaaggaaaagaaagcaaacgcgattccctgagtagtg 213

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           ||||||||||||||| | |||||||||
Sbjct: 214 gcgagcgaaatgggaacggcctaaacc 240



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538
           ||||||||||||||||||||||||||||||||||||
Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589

---

>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0490D09
          Length = 154430

 Score =  194 bits (98), Expect = 2e-46
 Identities = 107/110 (97%)
 Strand = Plus / Minus

                                                                          
Query: 423    tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 482
              ||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508

                                                                
Query: 483    gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 532
              ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2886

 Score =  194 bits (98), Expect = 2e-46
 Identities = 134/146 (91%)
 Strand = Plus / Plus

                                                                       
Query: 319 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378
           ||||| ||||| |||||| |||||| | |||||||||||||||||||||| |||||||||
Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444

                                                                       
Query: 379 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438
           |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| 
Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504

                                     
Query: 439 tgggtagtgaaatagaacgtgaaacc 464
            ||| ||||||||||||| |||||||
Sbjct: 505 aggggagtgaaatagaacatgaaacc 530



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/123 (90%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||| ||||| | ||||||||||||||||||||| ||||| | || |||||||||||||
Sbjct: 162 agagaaaacctagtgaactgaaacatcttagtagctagaggaataa-aaagcaaaagcga 220

                                                                       
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 214
           ||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 221 ttcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggg 280

              
Query: 215 aga 217
           |||
Sbjct: 281 aga 283



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  194 bits (98), Expect = 2e-46
 Identities = 134/146 (91%)
 Strand = Plus / Plus

                                                                        
Query: 319  agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 378
            ||||| ||||| |||||| |||||| | |||||||||||||||||||||| |||||||||
Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478

                                                                        
Query: 379  tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 438
            |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| 
Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538

                                      
Query: 439  tgggtagtgaaatagaacgtgaaacc 464
             ||| ||||||||||||| |||||||
Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/123 (90%), Gaps = 1/123 (0%)
 Strand = Plus / Plus

                                                                        
Query: 95   agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
            ||||| ||||| | ||||||||||||||||||||| ||||| | || |||||||||||||
Sbjct: 3196 agagaaaacctagtgaactgaaacatcttagtagctagaggaataa-aaagcaaaagcga 3254

                                                                        
Query: 155  ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 214
            ||||| |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||
Sbjct: 3255 ttcccttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtggg 3314

               
Query: 215  aga 217
            |||
Sbjct: 3315 aga 3317



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 53/55 (96%)
 Strand = Plus / Plus

                                                                   
Query: 504  tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
            ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 3655

---

>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score =  194 bits (98), Expect = 2e-46
 Identities = 137/150 (91%)
 Strand = Plus / Plus

                                                                         
Query: 315   cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
             ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239

                                                                         
Query: 375   taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
             ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299

                                           
Query: 435   ccagtgggtagtgaaatagaacgtgaaacc 464
             |    ||| ||||||||||||| |||||||
Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/87 (89%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 109   gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
             |||||||||||||||||||||  || | ||||||||||||| |||||||||  ||||| |
Sbjct: 24964 gaactgaaacatcttagtagct-gaaggaaaagaaagcaaacgcgattccctgagtagtg 25022

                                        
Query: 169   gcgagcgaaatgggagcagcctaaacc 195
             ||||||||||||||| |||||||||||
Sbjct: 25023 gcgagcgaaatgggaacagcctaaacc 25049



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                 
Query: 503   ctgaccgcgtgcctgttgaagaatgagccggcgact 538
             ||||||||||||||||||||||||||||||||||||
Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398

---

>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene,
           partial sequence
          Length = 2364

 Score =  192 bits (97), Expect = 9e-46
 Identities = 136/149 (91%)
 Strand = Plus / Plus

                                                                       
Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377
           ||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||||||
Sbjct: 1   gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60

                                                                       
Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437
           ||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||  
Sbjct: 61  atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120

                                        
Query: 438 gtgggtagtgaaatagaacgtgaaaccgt 466
           | ||| ||||||||||||| |||||||||
Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 511 gtgcctgttgaagaatgagccggcgactcatagg 544
           |||||||||||||||||||||||||||| |||||
Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224

---

>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2864

 Score =  192 bits (97), Expect = 9e-46
 Identities = 196/225 (87%), Gaps = 8/225 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
           |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| ||||||
Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625

                                                                       
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 493
           ||| || || ||||||||||||| ||||||||| |   |||  |||||||||||||||| 
Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681

                                                        
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 538
            ||    | ||||||||||||||||||||||||||||||||||||
Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/103 (91%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||| ||||| || |||||||||||||| ||||||| |||| |||||||||||||||||
Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggagg-aaaagaaagcaaaagcg 198

                                                      
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           ||||||| ||||||||||||||||| |||| ||||||||||||
Sbjct: 199 attcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
            ||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 157 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 215

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 216 gcgagcgaaccgggaacagcctaaacc 242



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score =  190 bits (96), Expect = 3e-45
 Identities = 138/152 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |   |||| ||||||||||||| |||||||||
Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553



 Score =  101 bits (51), Expect = 2e-18
 Identities = 79/87 (90%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| ||||||||||||||||||
Sbjct: 175 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagcg 233

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggtta 640

---

>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score =  186 bits (94), Expect = 5e-44
 Identities = 156/176 (88%), Gaps = 3/176 (1%)
 Strand = Plus / Minus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
              |||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||
Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004

                                                                      
Query: 435    ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490
              |||  ||| ||||||| ||| | ||||||||   ||||||  ||||||||||||||
Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951



 Score =  186 bits (94), Expect = 5e-44
 Identities = 156/176 (88%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
              |||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||
Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922

                                                                      
Query: 435    ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490
              |||  ||| ||||||| ||| | ||||||||   ||||||  ||||||||||||||
Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975



 Score =  107 bits (54), Expect = 4e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                          
Query: 95     agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
              |||| |||||| ||||| ||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagagg-aaaagaaagcaaacgcga 171299

                                                        
Query: 155    ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
              |||||  ||||||||||||||| | |||| ||||||||||||
Sbjct: 171298 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257



 Score =  107 bits (54), Expect = 4e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                          
Query: 95     agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
              |||| |||||| ||||| ||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagagg-aaaagaaagcaaacgcga 121627

                                                        
Query: 155    ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
              |||||  ||||||||||||||| | |||| ||||||||||||
Sbjct: 121628 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Minus

                                                                      
Query: 503    ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||
Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 170886



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                      
Query: 503    ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||
Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 122040

---

>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 3397

 Score =  186 bits (94), Expect = 5e-44
 Identities = 205/238 (86%), Gaps = 8/238 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||| | |  ||||||| ||||||| ||||| ||||||||
Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 494
           |    ||| ||||||||||||| ||||||||   | ||||  |||||||||||||    |
Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739

                                                                     
Query: 495 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           ||| | ||  ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 797



 Score =  105 bits (53), Expect = 2e-19
 Identities = 90/101 (89%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||||||||  | ||| |||||||||||||||||  |||| ||||||||||||| ||||
Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggagg-aaaagaaagcaaacgcga 198

                                                    
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||||||||||||||  |||| |||||||||||
Sbjct: 199 ttcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239

---

>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2937

 Score =  186 bits (94), Expect = 5e-44
 Identities = 156/176 (88%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||
Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513

                                                                   
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 490
           |||  ||| ||||||| ||| | ||||||||   ||||||  ||||||||||||||
Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566



 Score =  107 bits (54), Expect = 4e-20
 Identities = 91/102 (89%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           |||| |||||| ||||| ||||||||||||||||| ||||| ||||||||||||| ||||
Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagagg-aaaagaaagcaaacgcga 218

                                                     
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||||  ||||||||||||||| | |||| ||||||||||||
Sbjct: 219 ttcccccagtagcggcgagcgacaagggatcagcctaaaccg 260



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||
Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggtta 631

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2834

 Score =  184 bits (93), Expect = 2e-43
 Identities = 139/153 (90%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||
Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 433
           |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| ||
Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565

                                            
Query: 434 cccagtgggtagtgaaatagaacgtgaaaccgt 466
           |||   ||| ||||||||||||| |||||||||
Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598



 Score =  117 bits (59), Expect = 4e-23
 Identities = 93/103 (90%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           |||||| |||| || ||| ||||||||||||||| || |||| ||||||||||||| |||
Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggagg-aaaagaaagcaaacgcg 206

                                                      
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 207 attcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 52/56 (92%)
 Strand = Plus / Plus

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||| |||   |||||||||||||
Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggtta 684

---

>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA
           (rrnL), site-specific DNA endonuclease I-AstI gene
          Length = 4859

 Score =  182 bits (92), Expect = 8e-43
 Identities = 203/234 (86%), Gaps = 12/234 (5%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||
Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
           ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| ||||||
Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502

                                                                       
Query: 434 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 490
           |||    ||| ||||||||||||| ||||||||  ||||||     ||||||||||||||
Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557

                                                                 
Query: 491 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544
           |   |||  || |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/88 (89%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           ||||| |||||||||||||||||  || | |||||||||||||||||||||||  |||||
Sbjct: 155 gcgaattgaaacatcttagtagct-gaaggaaaagaaagcaaaagcgattcccaaagtag 213

                                       
Query: 167 cggcgagcgaaatgggagcagcctaaac 194
           ||||||||| ||||||| ||||||||||
Sbjct: 214 cggcgagcggaatgggaacagcctaaac 241

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  182 bits (92), Expect = 8e-43
 Identities = 137/152 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| |
Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||
Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |||  ||| ||||||||||| | |||||||||
Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522



 Score =  123 bits (62), Expect = 7e-25
 Identities = 132/154 (85%), Gaps = 1/154 (0%)
 Strand = Plus / Plus

                                                                       
Query: 43  attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 102
           |||||| |||||| ||||||| || ||| |||| ||||| |||   |||| |||||||||
Sbjct: 97  attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaa 156

                                                                       
Query: 103 cctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgta 162
           || |||||| |||||||||||||||||| | || ||||||||||||| ||||||||| ||
Sbjct: 157 cccggcgaattgaaacatcttagtagccggtgg-aaaagaaagcaaacgcgattccctta 215

                                             
Query: 163 gtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||| ||||||||||| |||| ||| ||||||||
Sbjct: 216 gtagtggcgagcgaaaagggatcagtctaaaccg 249



 Score =  105 bits (53), Expect = 2e-19
 Identities = 56/57 (98%)
 Strand = Plus / Plus

                                                                    
Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtta 612

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 4181

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | |||||
Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517

                                         
Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464
           |   |||| ||||||||||||| |||||||
Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 637



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 76/87 (87%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||| |
Sbjct: 174 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagtg 232

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||| ||||  ||||  ||||||||||
Sbjct: 233 gcgaacgaaccgggattagcctaaacc 259

---

>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial
           sequence
          Length = 629

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | |||||
Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362

                                         
Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464
           |    ||| ||||||||||||| |||||||
Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392



 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 78/87 (89%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||||||||||  || | || |||||||||| |||||||||| ||||| |
Sbjct: 8   gaactgaaacatcttagtagct-gaaggaagagaaagcaaacgcgattcccggagtagtg 66

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           ||||||||||||||| |||||||||||
Sbjct: 67  gcgagcgaaatgggaacagcctaaacc 93



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgact 538
           |||||||||| |||||||||||||| ||||||||||
Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461

---

>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1
          Length = 1965

 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | |||||
Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517

                                         
Query: 435 ccagtgggtagtgaaatagaacgtgaaacc 464
           |   |||| ||||||||||||| |||||||
Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||
Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggtta 637



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 76/87 (87%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||| |||||||||||||||| |
Sbjct: 174 gaactgaaacatctaagtagctggagg-aaaagaaagcaaacgcgattcccgtagtagtg 232

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||| ||||  ||||  ||||||||||
Sbjct: 233 gcgaacgaaccgggattagcctaaacc 259

---

>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial
           sequence
          Length = 2451

 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Plus

                                                                       
Query: 318 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 377
           ||||||||||||||| ||| |||||| ||||||||||| || |||| || | ||||||||
Sbjct: 1   gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60

                                                                       
Query: 378 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 437
           ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 61  atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120

                                        
Query: 438 gtgggtagtgaaatagaacgtgaaaccgt 466
             ||| ||||||||||||| |||||||||
Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 502 tctgaccgcgtgcctgttgaagaatgagccggcga 536
           |||||||| ||||||||||||||||||||||||||
Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 7514

 Score =  176 bits (89), Expect = 5e-41
 Identities = 138/153 (90%), Gaps = 1/153 (0%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| |||||||||||||||  | |||||||||| | |||||
Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||  | ||
Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646

                                            
Query: 435 ccagt-gggtagtgaaatagaacgtgaaaccgt 466
           ||||| ||| ||||||||||||| |||||||||
Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679



 Score =  133 bits (67), Expect = 7e-28
 Identities = 95/103 (92%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcg 153
           ||||||||||| || ||| |||||||||||||||||| |||| ||||||||||||| |||
Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggagg-aaaagaaagcaaacgcg 206

                                                      
Query: 154 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 196
           |||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 207 attcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           ||||||| ||||||||||||||||||||||||||| |||   |||||||||||||
Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggtta 768

---

>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544
           |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 6   gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 64

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 65  cggcgagcgaacggggaagagcctaaacc 93

---

>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544
           |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 6   gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 64

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 65  cggcgagcgaacggggaagagcctaaacc 93

---

>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial
           sequence
          Length = 723

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 73/86 (84%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 aactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcgg 169
           ||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  ||||||||
Sbjct: 22  aactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtagcgg 80

                                     
Query: 170 cgagcgaaatgggagcagcctaaacc 195
           ||||||||  ||||  ||||||||||
Sbjct: 81  cgagcgaacggggaagagcctaaacc 106

---

>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial
           sequence
          Length = 723

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 19  gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 77

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 78  cggcgagcgaacggggaagagcctaaacc 106

---

>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544
           |||||| |||||||||||||||||||||||||||| |||||
Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 6   gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 64

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 65  cggcgagcgaacggggaagagcctaaacc 93

---

>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial
           sequence
          Length = 806

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 19  gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 77

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 78  cggcgagcgaacggggaagagcctaaacc 106

---

>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial
           sequence
          Length = 723

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 19  gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 77

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 78  cggcgagcgaacggggaagagcctaaacc 106

---

>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial
           sequence
          Length = 806

 Score =  176 bits (89), Expect = 5e-41
 Identities = 137/153 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | |||||
Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||| |||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||
Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351

                                            
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtg 467
           |  | ||| ||||||||||||| ||||||||||
Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           |||||| |||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 76/89 (85%), Gaps = 1/89 (1%)
 Strand = Plus / Plus

                                                                       
Query: 107 gcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtag 166
           |||||||||||||||||||||||  |||| ||| ||||| |||| ||| ||||  |||||
Sbjct: 19  gcgaactgaaacatcttagtagctggagg-aaaggaaagtaaaaacgactccctaagtag 77

                                        
Query: 167 cggcgagcgaaatgggagcagcctaaacc 195
           |||||||||||  ||||  ||||||||||
Sbjct: 78  cggcgagcgaacggggaagagcctaaacc 106

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score =  176 bits (89), Expect = 5e-41
 Identities = 113/121 (93%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||
Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484

            
Query: 434 c 434
           |
Sbjct: 485 c 485



 Score =  121 bits (61), Expect = 3e-24
 Identities = 89/97 (91%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 caacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattccc 159
           |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 150 caacctggcgaactgaaacatcttagtagccagagg-aagagaaagcaaacgcgattccc 208

                                                
Query: 160 gtagtagcggcgagcgaaatgggagcagcctaaaccg 196
             ||||||||||||||||  |||| ||||||||||||
Sbjct: 209 ccagtagcggcgagcgaagagggaacagcctaaaccg 245



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                            
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 237 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 286
           ||||| |||||||||||||| |||||||  ||||||  | ||||||||||
Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2901

 Score =  176 bits (89), Expect = 5e-41
 Identities = 113/121 (93%)
 Strand = Plus / Plus

                                                                       
Query: 314 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
           ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||
Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437

                                                                       
Query: 374 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
           |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497

            
Query: 434 c 434
           |
Sbjct: 498 c 498



 Score =  121 bits (61), Expect = 3e-24
 Identities = 89/97 (91%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 caacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattccc 159
           |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 163 caacctggcgaactgaaacatcttagtagccagagg-aagagaaagcaaacgcgattccc 221

                                                
Query: 160 gtagtagcggcgagcgaaatgggagcagcctaaaccg 196
             ||||||||||||||||  |||| ||||||||||||
Sbjct: 222 ccagtagcggcgagcgaagagggaacagcctaaaccg 258



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 42/42 (100%)
 Strand = Plus / Plus

                                                     
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 544
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 605



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 237 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 286
           ||||| |||||||||||||| |||||||  ||||||  | ||||||||||
Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score =  176 bits (89), Expect = 5e-41
 Identities = 113/121 (93%)
 Strand = Plus / Plus

                                                                        
Query: 314  acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 373
            ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||
Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011

                                                                        
Query: 374  ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 433
            |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071

             
Query: 434  c 434
            |
Sbjct: 5072 c 5072



 Score =  121 bits (61), Expect = 3e-24
 Identities = 89/97 (91%), Gaps = 1/97 (1%)
 Strand = Plus / Plus

                                                                        
Query: 100  caacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattccc 159
            |||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||
Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagagg-aagagaaagcaaacgcgattccc 4795

                                                 
Query: 160  gtagtagcggcgagcgaaatgggagcagcctaaaccg 196
              ||||||||||||||||  |||| ||||||||||||
Sbjct: 4796 ccagtagcggcgagcgaagagggaacagcctaaaccg 4832



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 48/49 (97%)
 Strand = Plus / Plus

                                                             
Query: 503  ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
            ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5138 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 5186



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 237  gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 286
            ||||| |||||||||||||| |||||||  ||||||  | ||||||||||
Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923

---

>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence
          Length = 3359

 Score =  176 bits (89), Expect = 5e-41
 Identities = 209/245 (85%), Gaps = 8/245 (3%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||  |||||||||| |||||||||||||| ||| |||||||||| | |||||
Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||||||||||| |||||||||||| ||| |||||||| ||||||||||||||||  | ||
Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617

                                                                       
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 493
           |    ||| ||||||| ||||| ||||||||   | ||||  ||||||||||||||| ||
Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674

                                                                       
Query: 494 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 553
           ||   | | |||||||||||||||||||||||||||||||||||| ||||| |||||| |
Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730

                
Query: 554 ggtta 558
           |||||
Sbjct: 731 ggtta 735



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 73/82 (89%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 114 gaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcggcgag 173
           ||||||||||||||||  |||| ||||||||||||| ||||||||| |||||||||||||
Sbjct: 280 gaaacatcttagtagctggagg-aaaagaaagcaaacgcgattcccttagtagcggcgag 338

                                 
Query: 174 cgaaatgggagcagcctaaacc 195
           ||||||   | |||||||||||
Sbjct: 339 cgaaatcccaacagcctaaacc 360

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/152 (91%), Gaps = 3/152 (1%)
 Strand = Plus / Plus

                                                                          
Query: 315    cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
              ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | |||||
Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924

                                                                          
Query: 375    taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
              ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |
Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983

                                              
Query: 434    cccagt-gggtagtgaaatagaacgtgaaacc 464
              |||||| ||| |||| |||||||| |||||||
Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015



 Score =  174 bits (88), Expect = 2e-40
 Identities = 139/152 (91%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                         
Query: 315   cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
             ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | |||||
Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620

                                                                         
Query: 375   taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 433
             ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |
Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561

                                             
Query: 434   cccagt-gggtagtgaaatagaacgtgaaacc 464
             |||||| ||| |||| |||||||| |||||||
Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529



 Score =  103 bits (52), Expect = 6e-19
 Identities = 80/88 (90%), Gaps = 1/88 (1%)
 Strand = Plus / Plus

                                                                          
Query: 109    gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
              |||||||||||||||||||  | |||| ||||||||||||| ||||||||| ||||||||
Sbjct: 136649 gaactgaaacatcttagtaagcggagg-aaaagaaagcaaacgcgattcccttagtagcg 136707

                                          
Query: 169    gcgagcgaaatgggagcagcctaaaccg 196
              ||||||||| ||||| ||||||||||||
Sbjct: 136708 gcgagcgaagtgggaacagcctaaaccg 136735



 Score =  103 bits (52), Expect = 6e-19
 Identities = 80/88 (90%), Gaps = 1/88 (1%)
 Strand = Plus / Minus

                                                                         
Query: 109   gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
             |||||||||||||||||||  | |||| ||||||||||||| ||||||||| ||||||||
Sbjct: 48895 gaactgaaacatcttagtaagcggagg-aaaagaaagcaaacgcgattcccttagtagcg 48837

                                         
Query: 169   gcgagcgaaatgggagcagcctaaaccg 196
             ||||||||| ||||| ||||||||||||
Sbjct: 48836 gcgagcgaagtgggaacagcctaaaccg 48809



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 504    tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
              ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggtta 137107



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 51/55 (92%)
 Strand = Plus / Minus

                                                                    
Query: 504   tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
             ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||
Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggtta 48437

---

>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA
           (rrnL) gene
          Length = 3403

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||| ||||||||||||||||| ||| |||||||  ||||||||||||||||| ||||
Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |    ||| ||||||||||||| |||||||||
Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735



 Score =  101 bits (51), Expect = 2e-18
 Identities = 88/99 (88%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||||||||  | |||||||||||||| ||||||  |||| ||||||||||||||||||
Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggagg-aaaagaaagcaaaagcga 199

                                                  
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           |||||||||||| ||||||||||  |||| |||||||||
Sbjct: 200 ttcccgtagtagtggcgagcgaaccgggaacagcctaaa 238



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                          
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 550
           |||||||||||||||||||||||||||| |||||| ||||| |||||
Sbjct: 769 tgaccgcgtgcctgttgaagaatgagcctgcgacttataggaagtgg 815

---

>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA
           (rrnL) gene
          Length = 5001

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           |||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           ||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||| 
Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacct 500

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |    ||| ||||||||||| | |||||||||
Sbjct: 501 catcaggggagtgaaatagaccatgaaaccgt 532



 Score =  109 bits (55), Expect = 1e-20
 Identities = 89/99 (89%), Gaps = 1/99 (1%)
 Strand = Plus / Plus

                                                                       
Query: 95  agagacaacctggcgaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcga 154
           ||||||||||  | ||| |||||||||||||||||  |||| || |||||||||||||||
Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgagg-aagagaaagcaaaagcga 207

                                                  
Query: 155 ttcccgtagtagcggcgagcgaaatgggagcagcctaaa 193
           |||||| |||||||||||||||||||||| |||||||||
Sbjct: 208 ttcccggagtagcggcgagcgaaatgggaacagcctaaa 246



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                  
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||| |||||||||||||||||||| ||||||| ||||| || ||||||||||
Sbjct: 565 tgaccgtgtgcctgttgaagaatgagctggcgacttatagggagaggcttggtta 619

---

>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA
           (rrnL) gene
          Length = 3455

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | |||||
Sbjct: 624 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 683

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||||
Sbjct: 684 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 743

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
               | || ||||||||||||| |||||||||
Sbjct: 744 ttgttagggagtgaaatagaacatgaaaccgt 775



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 78/87 (89%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| || |||||||||| ||||||||||||||||||
Sbjct: 175 gaactgaaacatctaagtagctggagg-aatagaaagcaaacgcgattcccgtagtagcg 233

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           |||||||||  |||| |||||||||||
Sbjct: 234 gcgagcgaaccgggaacagcctaaacc 260



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 504 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 551
           ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 808 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 855

---

>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal
           RNA (rrnL), site-specific DNA endonuclease I-CpaI,
           site-specific DNA endonuclease I-CpaIII, site-specific
           DNA endonuclease I-CpaIV, site-specific DNA endonuclease
           I-CpaV genes
          Length = 8217

 Score =  174 bits (88), Expect = 2e-40
 Identities = 136/152 (89%)
 Strand = Plus / Plus

                                                                       
Query: 315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 374
           ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | |||||
Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576

                                                                       
Query: 375 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 434
           |||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||||
Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaaccc 636

                                           
Query: 435 ccagtgggtagtgaaatagaacgtgaaaccgt 466
           |    ||| ||||||||||||| |||||||||
Sbjct: 637 ctgtgggggagtgaaatagaacatgaaaccgt 668



 Score =  117 bits (59), Expect = 4e-23
 Identities = 81/87 (93%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                       
Query: 109 gaactgaaacatcttagtagccagaggnaaaagaaagcaaaagcgattcccgtagtagcg 168
           |||||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||
Sbjct: 174 gaactgaaacatctaagtagctggagg-aaaagaaagcaaaagcgattcccgtagtagcg 232

                                      
Query: 169 gcgagcgaaatgggagcagcctaaacc 195
           ||||||||| ||||| |||||||||||
Sbjct: 233 gcgagcgaactgggatcagcctaaacc 259



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 503 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 558
           |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 700 ctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggcttggtta 755


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,506,861
Number of Sequences: 3902068
Number of extensions: 3506861
Number of successful extensions: 101798
Number of sequences better than 10.0: 26280
Number of HSP's better than 10.0 without gapping: 26004
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 58006
Number of HSP's gapped (non-prelim): 40086
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---