>PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 651

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
 Frame = +1

Query: 100 PGAGLSMYXNTPRXRRPXHAGF--------FXTGRPPPSRFL 201
           PGA L+MY   P+ RRP   G         F TG   P  FL
Sbjct: 242 PGAALAMYLAAPKARRPMVGGMLLSVAITAFLTGVTEPLEFL 283

>PTW3C_ECOLI (P09323) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 648

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 8/42 (19%)
 Frame = +1

Query: 100 PGAGLSMYXNTPRXRRPXHAGF--------FXTGRPPPSRFL 201
           PGA L+MY   P+ RRP   G         F TG   P  FL
Sbjct: 242 PGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGVTEPLEFL 283

>R3HD1_HUMAN (Q15032) R3H domain-containing protein 1|
          Length = 1099

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 82  QPSRPGPGAGLSMYXNTPRXRRPXHAGFFXTGRPPP 189
           QPS  G     +M+ +T   + P  +G+  T  PPP
Sbjct: 556 QPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPP 591

>DNJB2_HUMAN (P25686) DnaJ homolog subfamily B member 2 (Heat shock 40 kDa|
           protein 3) (DnaJ protein homolog 1) (HSJ-1)
          Length = 351

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 206 QHRKREGGGRPVXKXPAWXG-RRXRGV 129
           QHR R+G  RP  K  AW G RR RGV
Sbjct: 280 QHR-RQGRPRPSTKIQAWGGPRRVRGV 305


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,432,171
Number of Sequences: 219361
Number of extensions: 368268
Number of successful extensions: 1160
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)