>SYI_ENTFA (Q836V1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 926

 Score = 31.6 bits (70), Expect = 0.81
 Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 408 WSFIYSMEKLLQLATQCNKPSRHALKQQESIFKTWM-HLDLQEKN*FRDEVLKTRRHAAH 232
           WSF+   E+ +QLA     P       +E +  TW   +D      FRD VLK    A H
Sbjct: 767 WSFLQEEEEYVQLA---EFPGYETFTNEEELMDTWAAFMD------FRDNVLKALEEARH 817

Query: 231 S 229
           S
Sbjct: 818 S 818

>Z585B_PONPY (Q5RB30) Zinc finger protein 585B|
          Length = 769

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 306 WMHLDLQEKN*FRDEVLKTRRH 241
           W HLDL ++N +RD +L+T  H
Sbjct: 41  WQHLDLSQRNLYRDVMLETYSH 62

>VAX2_MOUSE (Q9WTP9) Ventral anterior homeobox 2 (Ventral retina homeodomain|
           protein)
          Length = 292

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -1

Query: 133 ALMIHVPGFPGLAETHR-----NPVHSLPRLASTGIASAAWPKP 17
           +L+   PG PGL  +HR     +P +S PRL     ASA+ P P
Sbjct: 199 SLLALTPGLPGLPASHRGTSLVDPRNSSPRLNPMPSASASSPLP 242

>SYL_PORGI (Q7MW49) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 925

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 204 EYLGLTRANYALRDAVFSRPR 266
           ++LG  + NY LRDA+FSR R
Sbjct: 465 KHLGCVKVNYRLRDAIFSRQR 485

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 17/86 (19%)
 Frame = +2

Query: 17   RLRPRRAGDAGGRQPRQAV------------HGVSVRLRQAGKPRNVDHQRLHMA----- 145
            R RPRR    GGR  R+A              G SV L +A +P     QRL        
Sbjct: 2290 RRRPRRRRGGGGRALRRAPGPREPLAQDSPGRGPSVCLARAARPAGP--QRLLPGPRTGQ 2347

Query: 146  SPRGRARVRPAACLQASHRGVPWSYP 223
            +PR R   +PA  +Q   RG+  S P
Sbjct: 2348 APRARLPQKPARSVQRERRGLVLSPP 2373

>Z585B_HUMAN (Q52M93) Zinc finger protein 585B (zinc finger protein 41-like|
           protein)
          Length = 769

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 306 WMHLDLQEKN*FRDEVLKTRRH 241
           W HLDL ++N +RD +L+T  H
Sbjct: 41  WRHLDLSQRNLYRDVMLETYSH 62

>EURL_MOUSE (Q9D7G4) Protein EURL homolog|
          Length = 290

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 417 KANWSFIYSMEKLLQLATQCNKPSRHAL 334
           K NW   Y+  K L L ++C+K S+H L
Sbjct: 93  KINWIVQYAQNKNLDLESECSKTSQHPL 120

>SYL_BACFR (Q64MG4) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 943

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +3

Query: 78  GFLCVSAKPGNPGTWIISAFIWPRLAAALESDQQRVFKPLTAEYLGLTRANYALRDAVFS 257
           G +  S +PG P   ++   +  + A A   +       + A  LG  + N+ LRDA+FS
Sbjct: 431 GIMMNSPRPGAPEGGLVLNGLTVKEAIAKTKEY------IKATGLGRVKVNFRLRDAIFS 484

Query: 258 RPR 266
           R R
Sbjct: 485 RQR 487

>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 944

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +3

Query: 210 LGLTRANYALRDAVFSRPR 266
           LG  + NY LRDA+FSR R
Sbjct: 470 LGRVKVNYRLRDAIFSRQR 488

>VAX2_HUMAN (Q9UIW0) Ventral anterior homeobox 2|
          Length = 290

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = -1

Query: 133 ALMIHVPGFPGLAETHR-----NPVHSLPRLASTGIASAAWPKP 17
           +L+   P  PGL  +HR     +P +S PRL     ASA+ P P
Sbjct: 199 SLLALTPSLPGLPASHRGTSLGDPRNSSPRLNPLSSASASPPLP 242

>BPA1_HUMAN (Q03001) Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa|
           bullous pemphigoid antigen) (BPA) (Hemidesmosomal plaque
           protein) (Dystonia musculorum protein) (Dystonin)
           (Fragment)
          Length = 3214

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = -1

Query: 112 GFPGLAETHRNPVHSLPRLASTG 44
           GFP LAET ++P+  LP +AS G
Sbjct: 11  GFPRLAETLQHPMCPLPLVASAG 33

>MGR5_RAT (P31424) Metabotropic glutamate receptor 5 precursor (mGluR5)|
          Length = 1203

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 54   ANLGRLCTGFLCVSAKPGNPGTWIISAFIWPR 149
            AN+  L +  L  +A PG PGT I S+++ P+
Sbjct: 1066 ANISELNSMMLSTAATPGPPGTPICSSYLIPK 1097

>SALM_DROVI (P39806) Homeotic protein spalt-major|
          Length = 1402

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 115 PGFPGLAETHRNPVHSLPRLASTGIASAAWPKP 17
           P FPGL   +R P+  L  L +T  ++A  P P
Sbjct: 548 PAFPGLPGIYRPPMELLKSLGATAGSTAGLPHP 580

>C3AR_RAT (O55197) C3a anaphylatoxin chemotactic receptor (C3a-R) (C3AR)|
          Length = 473

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 10  RAAASATPRWRCRWTPTSAGCARGFCASPPSRETQERGSSAPSYG 144
           R A S++   R  WT T+A  ++ F  SP    +Q+  S  P YG
Sbjct: 209 RTAPSSSVPARDLWTATTALQSQTFHTSPEDPFSQDSASQQPHYG 253

>GPA6_CAEEL (Q93743) Guanine nucleotide-binding protein alpha-6 subunit|
          Length = 364

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -2

Query: 402 FIYSMEKLLQLATQCNKPSRHALKQQESIFKTWMHLDL 289
           FI SM    QL  + NK +R  +KQ   IFKT +H DL
Sbjct: 234 FIVSMSDYDQLDPEDNKYNR--MKQSYEIFKTIVHSDL 269

>ARPA_ECOLI (P23325) Ankyrin-repeat protein A (Ankyrin-like regulatory protein)|
          Length = 728

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 17/42 (40%), Positives = 26/42 (61%)
 Frame = +3

Query: 81  FLCVSAKPGNPGTWIISAFIWPRLAAALESDQQRVFKPLTAE 206
           FL +S K  N  T I++A   P+LAA    D ++V+K L+A+
Sbjct: 435 FLAISRKDKNVVTSILNAL--PKLAATHHLDNEQVYKFLSAK 474

>TTBK1_HUMAN (Q5TCY1) Tau-tubulin kinase 1 (EC 2.7.11.1) (Brain-derived tau|
            kinase)
          Length = 1321

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = +1

Query: 4    GXRAAASATPRWRCRWTPTSAGCARGFCASPPSRETQERGSSAPSY 141
            G R  A  +PR      P S   AR   ASP S+    R S +PS+
Sbjct: 1224 GARPPAPRSPR-----LPASTSAARNASASPRSQSLSRRESPSPSH 1264

>DAX1_PIG (P79386) Nuclear receptor 0B1 (Nuclear receptor DAX-1)|
          Length = 471

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 202 AVRGLKTRCWSDSSAAARRGHMKALMIHVPGFPGL 98
           A++G   +CWS   +     ++K  ++  P  PGL
Sbjct: 361 AIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGL 395

>MAFB_HUMAN (Q9Y5Q3) Transcription factor MafB (V-maf musculoaponeurotic|
           fibrosarcoma oncogene homolog B)
          Length = 323

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = +2

Query: 59  PRQAVHGVSVRLRQAGKPRNVDHQRLHMASPRGRARVRPAACLQASHRG 205
           P  A  G  V   + G   +  H   H ASP   +   PA  L  SH G
Sbjct: 141 PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPG 189

>MURG_DECAR (Q47AA4) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 352

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/69 (27%), Positives = 34/69 (49%)
 Frame = +3

Query: 30  AALAMPVDANLGRLCTGFLCVSAKPGNPGTWIISAFIWPRLAAALESDQQRVFKPLTAEY 209
           AA+A P +    R  TG L +    G+ G  +++  +   +A   ESDQ ++      ++
Sbjct: 164 AAIAAPAERFAER--TGALRLLVIGGSLGAQVLNEMVPQAMALLGESDQPQIVHQAGEKH 221

Query: 210 LGLTRANYA 236
           +   +ANYA
Sbjct: 222 IEALKANYA 230


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,310,436
Number of Sequences: 219361
Number of extensions: 1216678
Number of successful extensions: 3673
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3670
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)