ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186639.1| Oryza sativa (japonica cultivar-group), mRNA Length = 483 Score = 365 bits (184), Expect = 9e-98 Identities = 322/368 (87%) Strand = Plus / Plus Query: 116 gacagagctctgccgtttcagtggtgccaagatataccccgggaagggtatcagattcat 175 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 9 gacagagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcat 68 Query: 176 ccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgctacttccacaa 235 |||| ||||||| || || ||||| || || ||||| ||||||||||||||||||||||| Sbjct: 69 ccgtgcagactcccaggtgttcctgttttcaaactcgaagtgcaagcgctacttccacaa 128 Query: 236 ccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcagcacaagaagga 295 |||||| | ||| || ||||| |||||||| ||||||| ||| ||||||||||||||||| Sbjct: 129 ccgtctgaagccagccaagcttacatggacagccatgtacagaaagcagcacaagaagga 188 Query: 296 tattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattccaggtc 355 |||||| || ||||| | |||||||| | |||||||||||||| ||||| ||| |||| Sbjct: 189 tattcacgccgaggcagtcaagaagaggcgccgcaccaccaagaaaccgtactcccggtc 248 Query: 356 aattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggaggtccg 415 || || |||||| | |||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 249 tatagttggtgctacccttgaagtcatccagaagaagagagctgagaagccagaggttcg 308 Query: 416 tgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaagaccaagga 475 |||||||||||||||| | ||||| |||||||||||||| |||||||||||||| ||||| Sbjct: 309 tgatgcagcaagggaatccgctcttcgtgagatcaaggagcgcatcaagaagacaaagga 368 Query: 476 tgagaaga 483 ||||||| Sbjct: 369 cgagaaga 376
>emb|X94296.1|HVRL24E H.vulgare mRNA for L24 ribosomal protein Length = 708 Score = 321 bits (162), Expect = 1e-84 Identities = 327/382 (85%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 ||||||||||||||||| ||||| |||||||| || || ||||| ||||| |||||| Sbjct: 61 aagatggttctgaagactgagctttgccgttttagcggccagaagatttacccagggaag 120 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 |||||||| ||||| |||||||| || || || ||||| || |||||||||| |||||| Sbjct: 121 ggtatcaggttcattcgttcagattcacaggttttcctctttgccaactcaaaatgcaag 180 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| ||||| || |||| ||||||| Sbjct: 181 cgctacttccacaaccgcctgaagcctgcaaagctttgctggacagcaatgtacaggaag 240 Query: 282 cagcacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagagg 341 |||||||||||||| || |||||||||||||| |||||||| | |||||||||||||| | Sbjct: 241 cagcacaagaaggacatccatgctgaggctgccaagaagaggcgccgcaccaccaagaag 300 Query: 342 ccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgag 401 ||||| || |||| ||||| ||||| | || |||||||||||||||||||| |||||| Sbjct: 301 ccgtactcacggtcgattgttggtgccacactggaagttatccagaagaagagggctgag 360 Query: 402 aagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatc 461 ||||| || ||||||||||| || || ||||| ||||| |||||||||||||| |||||| Sbjct: 361 aagcctgaagtccgtgatgctgccagagaagccgctcttcgtgagatcaaggagcgcatc 420 Query: 462 aagaagaccaaggatgagaaga 483 |||||||||||||||||||||| Sbjct: 421 aagaagaccaaggatgagaaga 442
>dbj|AK059430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F02, full insert sequence Length = 779 Score = 305 bits (154), Expect = 7e-80 Identities = 325/382 (85%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 |||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 95 aagatggtgctgaagacagagctttgccgttttagtggccagaagatatatccagggaag 154 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 || || | || || ||| | || || || ||||||||||| | |||||||| |||||| Sbjct: 155 ggcattcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaatgcaag 214 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| ||||||| ||||||| Sbjct: 215 cgctacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtacaggaag 274 Query: 282 cagcacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagagg 341 ||||||||||||||||| |||||||| |||| |||||||| | |||||||||||||| | Sbjct: 275 cagcacaagaaggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaag 334 Query: 342 ccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgag 401 || || || ||||||||||| ||||||||| | ||||| ||||| |||||||||||||| Sbjct: 335 ccatactctaggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaa 394 Query: 402 aagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatc 461 ||||| || || |||||||| || || ||||| ||||| ||||||||||||||||||||| Sbjct: 395 aagcctgaagttcgtgatgctgctagagaagctgctcttcgtgagatcaaggaacgcatc 454 Query: 462 aagaagaccaaggatgagaaga 483 ||||||||||||||||| |||| Sbjct: 455 aagaagaccaaggatgaaaaga 476
>gb|BT016435.1| Zea mays clone Contig268 mRNA sequence Length = 793 Score = 301 bits (152), Expect = 1e-78 Identities = 275/316 (87%) Strand = Plus / Plus Query: 168 agattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgctac 227 ||||| |||||| | || ||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 177 agatttatccgtgctgattctcaggtcttcctttttgccaactcgaaatgcaagcgctac 236 Query: 228 ttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcagcac 287 ||||||||||| || | |||||| ||||| || ||||| || |||| ||||||||||||| Sbjct: 237 ttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtacaggaagcagcac 296 Query: 288 aagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtat 347 ||||||||||| |||||||| || | ||||||||| | |||| ||||||||| ||| || Sbjct: 297 aagaaggatatccatgctgaagcggtaaagaagaggcgccgcgccaccaagaagccatac 356 Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccg 407 |||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 357 tccaggtcaattgtgggtgcttccttggaagtaatccagaagaagagagctgagaagcca 416 Query: 408 gaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaag 467 |||||||| ||||| || || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 417 gaggtccgcgatgctgctagagaagctgctcttcgtgagatcaaggagcgcatcaagaag 476 Query: 468 accaaggatgagaaga 483 |||||||||||||||| Sbjct: 477 accaaggatgagaaga 492
>gb|BT017947.1| Zea mays clone EL01N0521F01.c mRNA sequence Length = 859 Score = 301 bits (152), Expect = 1e-78 Identities = 275/316 (87%) Strand = Plus / Plus Query: 168 agattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgctac 227 ||||| |||||| | || ||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 231 agatttatccgtgctgattctcaggtcttcctttttgccaactcgaaatgcaagcgctac 290 Query: 228 ttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcagcac 287 ||||||||||| || | |||||| ||||| || ||||| || |||| ||||||||||||| Sbjct: 291 ttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtacaggaagcagcac 350 Query: 288 aagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtat 347 ||||||||||| |||||||| || | ||||||||| | |||| ||||||||| ||| || Sbjct: 351 aagaaggatatccatgctgaagcggtaaagaagaggcgccgcgccaccaagaagccatac 410 Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccg 407 |||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 411 tccaggtcaattgtgggtgcttccttggaagtaatccagaagaagagagctgagaagcca 470 Query: 408 gaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaag 467 |||||||| ||||| || || ||||| ||||| |||||||||||||| |||||||||||| Sbjct: 471 gaggtccgcgatgctgctagagaagctgctcttcgtgagatcaaggagcgcatcaagaag 530 Query: 468 accaaggatgagaaga 483 |||||||||||||||| Sbjct: 531 accaaggatgagaaga 546
>ref|XM_475453.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 486 Score = 299 bits (151), Expect = 4e-78 Identities = 322/379 (84%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 ||||| |||||||||||||| |||||||| ||||| |||||||| || |||||||| Sbjct: 1 atggtgctgaagacagagctttgccgttttagtggccagaagatatatccagggaagggc 60 Query: 165 atcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgc 224 || | || || ||| | || || || ||||||||||| | |||||||| ||||||||| Sbjct: 61 attcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaatgcaagcgc 120 Query: 225 tacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcag 284 |||||||||||||| || | |||||| ||||| || ||||| ||||||| |||||||||| Sbjct: 121 tacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtacaggaagcag 180 Query: 285 cacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccg 344 |||||||||||||| |||||||| |||| |||||||| | |||||||||||||| ||| Sbjct: 181 cacaagaaggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagcca 240 Query: 345 tattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaag 404 || || ||||||||||| ||||||||| | ||||| ||||| |||||||||||||| ||| Sbjct: 241 tactctaggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaag 300 Query: 405 ccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaag 464 || || || |||||||| || || ||||| ||||| |||||||||||||||||||||||| Sbjct: 301 cctgaagttcgtgatgctgctagagaagctgctcttcgtgagatcaaggaacgcatcaag 360 Query: 465 aagaccaaggatgagaaga 483 |||||||||||||| |||| Sbjct: 361 aagaccaaggatgaaaaga 379
>gb|BT018224.1| Zea mays clone EL01N0561E06.c mRNA sequence Length = 767 Score = 281 bits (142), Expect = 1e-72 Identities = 322/382 (84%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 |||||||| ||||||||||| |||||||| ||||| || ||||| || || ||||| Sbjct: 98 aagatggtgctgaagacagaactctgccgcttcagcggccagaagatttatcctgggaaa 157 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 || ||| |||| |||||| | || ||||| || |||||||| |||||||||| |||||| Sbjct: 158 ggcatccgatttatccgtgctgattctcaggttttcctttttgccaactcaaaatgcaag 217 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| || |||| ||||||| Sbjct: 218 cgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtacaggaag 277 Query: 282 cagcacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagagg 341 |||| |||||||||||| ||||||||||||| |||||||| | |||| ||||||||| | Sbjct: 278 cagcccaagaaggatatccatgctgaggctgtcaagaagaggcgccgcgccaccaagaag 337 Query: 342 ccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgag 401 || || || ||||| ||||| |||||||| || || || |||||||| ||||| |||||| Sbjct: 338 ccatactcgaggtccattgtgggtgcttccctagaggtgatccagaaaaagagggctgag 397 Query: 402 aagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatc 461 ||||| |||||||| ||||| || || ||||| ||||| || ||||||||||| |||||| Sbjct: 398 aagcccgaggtccgcgatgctgctagagaagctgctcttcgcgagatcaaggagcgcatc 457 Query: 462 aagaagaccaaggatgagaaga 483 |||||||||||||||||||||| Sbjct: 458 aagaagaccaaggatgagaaga 479
>gb|BT016791.1| Zea mays clone Contig624 mRNA sequence Length = 772 Score = 274 bits (138), Expect = 3e-70 Identities = 258/298 (86%) Strand = Plus / Plus Query: 186 tctcaagtcttccttttctccaactcaaagtgcaagcgctacttccacaaccgtctcagg 245 ||||| || |||||||| ||||||| || ||||||||||||||||||||||| || | | Sbjct: 187 tctcaggttttcctttttgccaactctaaatgcaagcgctacttccacaaccgcctgaag 246 Query: 246 cctgctaagctcacatggacggccatgttcaggaagcagcacaagaaggatattcatgct 305 ||||| ||||| || ||||| || |||| ||||||||||||||||||||| || |||||| Sbjct: 247 cctgcaaagcttacctggacagcaatgtacaggaagcagcacaagaaggacatccatgct 306 Query: 306 gaggctgcaaagaagagacaccgcaccaccaagaggccgtattccaggtcaattgtaggt 365 || |||| |||||||| | |||| ||||||||| |||||| || ||||| ||||| ||| Sbjct: 307 gaagctgtcaagaagaggcgccgcgccaccaagaagccgtactcgaggtccattgtgggt 366 Query: 366 gcttcgcttgaagttatccagaagaagagagctgagaagccggaggtccgtgatgcagca 425 ||||| | ||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 367 gcttccttggaagtgatccagaagaagagagctgagaagcctgaggtccgtgatgctgct 426 Query: 426 agggaagcagctctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 || ||||| ||||| |||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 427 agagaagctgctcttcgtgagatcaaggagcgcatcaagaagaccaaggacgagaaga 484
>dbj|AK101927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071P12, full insert sequence Length = 843 Score = 262 bits (132), Expect = 1e-66 Identities = 318/380 (83%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 ||||||||||||||||| || || |||||||| ||||| ||||||||||| || ||| Sbjct: 84 aagatggttctgaagactgaactttgccgttttagtgggcagaagatatacccaggcaag 143 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 |||||||| ||||| ||| | || || || || || || || ||||||| || |||||| Sbjct: 144 ggtatcaggttcattcgtgctgattcccaggtttttctgtttgccaactcgaaatgcaag 203 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| || |||| ||||||| Sbjct: 204 cgctacttccacaaccgcctgaagcctgccaagcttacctggacagctatgtacaggaag 263 Query: 282 cagcacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagagg 341 |||||||||||||| ||||||||||| |||| |||||||| | ||||||||||||| | Sbjct: 264 cagcacaagaaggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaag 323 Query: 342 ccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgag 401 || || || |||||||||| |||||| | || ||||||||||| |||||||| |||| Sbjct: 324 ccatactcacggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgag 383 Query: 402 aagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatc 461 || || || |||||||||||||| || ||||| ||||| |||||||||||||| |||||| Sbjct: 384 aaacctgaagtccgtgatgcagccagagaagcggctctccgtgagatcaaggagcgcatc 443 Query: 462 aagaagaccaaggatgagaa 481 ||||| |||||||||||||| Sbjct: 444 aagaaaaccaaggatgagaa 463
>dbj|AK058612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A11, full insert sequence Length = 781 Score = 262 bits (132), Expect = 1e-66 Identities = 318/380 (83%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 ||||||||||||||||| || || |||||||| ||||| ||||||||||| || ||| Sbjct: 83 aagatggttctgaagactgaactttgccgttttagtgggcagaagatatacccaggcaag 142 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 |||||||| ||||| ||| | || || || || || || || ||||||| || |||||| Sbjct: 143 ggtatcaggttcattcgtgctgattcccaggtttttctgtttgccaactcgaaatgcaag 202 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| || |||| ||||||| Sbjct: 203 cgctacttccacaaccgcctgaagcctgccaagcttacctggacagctatgtacaggaag 262 Query: 282 cagcacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagagg 341 |||||||||||||| ||||||||||| |||| |||||||| | ||||||||||||| | Sbjct: 263 cagcacaagaaggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaag 322 Query: 342 ccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgag 401 || || || |||||||||| |||||| | || ||||||||||| |||||||| |||| Sbjct: 323 ccatactcacggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgag 382 Query: 402 aagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatc 461 || || || |||||||||||||| || ||||| ||||| |||||||||||||| |||||| Sbjct: 383 aaacctgaagtccgtgatgcagccagagaagcggctctccgtgagatcaaggagcgcatc 442 Query: 462 aagaagaccaaggatgagaa 481 ||||| |||||||||||||| Sbjct: 443 aagaaaaccaaggatgagaa 462
>gb|AY109363.1| Zea mays CL303_3 mRNA sequence Length = 1436 Score = 260 bits (131), Expect = 4e-66 Identities = 242/279 (86%) Strand = Plus / Plus Query: 205 ccaactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatgga 264 |||||||||| ||||||||||||||||||||||| || | |||||| ||||| || |||| Sbjct: 915 ccaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgcaaagcttacctgga 974 Query: 265 cggccatgttcaggaagcagcacaagaaggatattcatgctgaggctgcaaagaagagac 324 | || |||| |||||||||||||||||||||||| ||||||||||||| |||||||| | Sbjct: 975 cagcaatgtacaggaagcagcacaagaaggatatccatgctgaggctgtcaagaagaggc 1034 Query: 325 accgcaccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatcc 384 |||| ||| ||||| ||| || || ||||| ||||| |||||||| || || || |||| Sbjct: 1035 gccgcgccaacaagaagccatactcgaggtccattgtgggtgcttccctagaggtgatcc 1094 Query: 385 agaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtg 444 |||||||||| ||||||||||| |||||||| ||||| || || ||||| ||||| || | Sbjct: 1095 agaagaagagggctgagaagcccgaggtccgcgatgctgctagagaagctgctcttcgcg 1154 Query: 445 agatcaaggaacgcatcaagaagaccaaggatgagaaga 483 |||||||||| |||||||||||||||||||||||||||| Sbjct: 1155 agatcaaggagcgcatcaagaagaccaaggatgagaaga 1193
>gb|AF298827.1|AF298827 Prunus avium 60S ribosomal protein L24 (RL24) mRNA, complete cds Length = 690 Score = 180 bits (91), Expect = 3e-42 Identities = 307/379 (81%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 |||||||| ||||| || ||||| ||||| || || |||||||| ||||| || ||||| Sbjct: 49 atggttctcaagaccgaactctgtcgttttagcggggccaagatttacccaggaaagggc 108 Query: 165 atcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgc 224 |||||||| || ||||| |||||||| |||||||| || |||||||||| ||||| | Sbjct: 109 atcagatttattcgttctgactctcaggtcttcctgtttgccaactcaaaatgcaaaagg 168 Query: 225 tacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcag 284 |||||||||||| | | | ||| | ||||| || ||||| ||||||| |||||||||| Sbjct: 169 tacttccacaacaggttgaagccatcaaagcttacctggacagccatgtacaggaagcag 228 Query: 285 cacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccg 344 ||||| ||||||||| | || |||| |||||||| || |||||||||| ||| Sbjct: 229 cacaaaaaggatattgctcaagaagctgtgaagaagaggagacgtaccaccaagaagcct 288 Query: 345 tattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaag 404 || || ||||| ||||| ||||| | || || ||||||||||||| |||| |||||||| Sbjct: 289 tactcaaggtctattgtgggtgccacactcgaggttatccagaagaggagaactgagaag 348 Query: 405 ccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaag 464 || ||||| |||||||| ||||||||||| ||||| ||||| |||||||| | |||||| Sbjct: 349 cccgaggttcgtgatgctgcaagggaagctgctctccgtgaaatcaaggagaggatcaag 408 Query: 465 aagaccaaggatgagaaga 483 || ||||||||||| |||| Sbjct: 409 aaaaccaaggatgaaaaga 427
>gb|BT018227.1| Zea mays clone EL01N0561F11.c mRNA sequence Length = 1335 Score = 174 bits (88), Expect = 2e-40 Identities = 166/192 (86%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 ||||||| ||||||||||||| |||||||| | |||| ||||||||| ||| || || | Sbjct: 810 aggatatccatgctgaggctgtcaagaagaggcgccgcgccaccaagaagccatactcga 869 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||| ||||| |||||||| || || || |||||||||||||| ||||||||||| |||| Sbjct: 870 ggtccattgtgggtgcttccctagaggtgatccagaagaagagggctgagaagcccgagg 929 Query: 412 tccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaagacca 471 |||| ||||| || || ||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 930 tccgcgatgctgctagagaagctgctcttcgcgagatcaaggagcgcatcaagaagacca 989 Query: 472 aggatgagaaga 483 |||||||||||| Sbjct: 990 aggatgagaaga 1001 Score = 121 bits (61), Expect = 2e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 |||||||| ||||||||||| |||||||| ||||| || || || || || ||||| Sbjct: 52 aagatggtgctgaagacagaactctgccgcttcagcggccagaacatttatcctgggaaa 111 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 || ||| |||| |||||| | || ||||| || |||||||| |||||||||| |||||| Sbjct: 112 ggcatccgatttatccgtgctgattctcaggttttcctttttgccaactcaaaatgcaag 171 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| || |||| ||||||| Sbjct: 172 cgctacttccacaaccgcctgaagcctgcaaagcttacctggacagcaatgtacaggaag 231 Query: 282 cagcacaagaagg 294 ||||||||||||| Sbjct: 232 cagcacaagaagg 244
>gb|DQ268857.1| Solanum tuberosum clone 174B08 ribosomal protein L24-like protein mRNA, complete cds Length = 706 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 ||||| || |||||||| |||||||||||||| ||||||||||||||||| |||| ||| Sbjct: 48 atggtgctaaagacagaactctgccgtttcagcggtgccaagatataccctgggagggga 107 Query: 165 atcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgc 224 |||||||| || || ||||| ||||| || ||||| || ||||||||||||||| | Sbjct: 108 atcagatttattcgatcagattctcaggtgttcctatttgtcaactcaaagtgcaaacat 167 Query: 225 tacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcag 284 |||||||||||||| || | |||| | ||||| |||||||| ||||||| |||||||||| Sbjct: 168 tacttccacaaccgcctgaagccttccaagcttacatggactgccatgtacaggaagcag 227 Query: 285 cacaagaaggatatt 299 ||||||||||||||| Sbjct: 228 cacaagaaggatatt 242 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 381 atccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagctcta 440 |||||||||||||||||||| | ||| || || || ||||| || ||||| || ||||| Sbjct: 324 atccagaagaagagagctgaaaggccagaagttcgagatgctgccagggaggctgctctt 383 Query: 441 cgtgagatcaaggaacgcatcaagaagaccaagga 475 ||||| ||||||||| | |||||||| || ||||| Sbjct: 384 cgtgaaatcaaggaaagaatcaagaaaacaaagga 418
>gb|BT013177.1| Lycopersicon esculentum clone 134253R, mRNA sequence Length = 781 Score = 141 bits (71), Expect = 2e-30 Identities = 302/379 (79%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 |||||||| |||||||| || ||||||||||||||||||||||| ||||| |||| || Sbjct: 33 atggttctcaagacagaactttgccgtttcagtggtgccaagatttaccctgggagaggc 92 Query: 165 atcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgc 224 |||||||| ||||| ||||||||||| || ||||| ||| ||||||||| || || | | Sbjct: 93 atcagatttatccggtcagactctcaggtgttcctattcgtcaactcaaaatgtaaacac 152 Query: 225 tacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagcag 284 |||||||||||| | | ||| | ||||| |||||||| || |||| |||||||| Sbjct: 153 tacttccacaacaagttgaagccatccaagcttacatggacagctatgtataggaagcaa 212 Query: 285 cacaagaaggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccg 344 ||||||||||||||| || ||||| |||||||| | || |||||||||| ||| Sbjct: 213 cacaagaaggatattgcacaagaagctgctaagaagaggcgacgtaccaccaagaagcct 272 Query: 345 tattccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaag 404 || || ||||| ||||| ||||| | | || || ||||||||||||||| |||| | | Sbjct: 273 tactctaggtctattgtgggtgcaaccttggaggtaatccagaagaagagaactgaaagg 332 Query: 405 ccggaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaag 464 || || || || ||||| || ||||| || ||||| ||||| || |||||| | |||||| Sbjct: 333 ccagaagttcgagatgctgccagggaggctgctcttcgtgaaattaaggaaaggatcaag 392 Query: 465 aagaccaaggatgagaaga 483 ||||| |||||||| |||| Sbjct: 393 aagacaaaggatgaaaaga 411
>dbj|AK106230.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B01, full insert sequence Length = 2034 Score = 137 bits (69), Expect = 4e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 102 aagatggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaag 161 |||||||| |||||||||||||| |||||||| ||||| |||||||| || |||||| Sbjct: 94 aagatggtgctgaagacagagctttgccgttttagtggccagaagatatatccagggaag 153 Query: 162 ggtatcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaag 221 || || | || || ||| | || || || ||||||||||| | |||||||| |||||| Sbjct: 154 ggcattcgctttattcgtgctgattcacaggtcttcctttttgcaaactcaaaatgcaag 213 Query: 222 cgctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaag 281 ||||||||||||||||| || | |||||| ||||| || ||||| ||||||| ||||||| Sbjct: 214 cgctacttccacaaccgcctgaagcctgcaaagcttacctggacagccatgtacaggaag 273 Query: 282 cagcacaagaaggatat 298 ||||||||||||||||| Sbjct: 274 cagcacaagaaggatat 290
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 |||||||||| || ||||| | |||||||| | |||||||||||||| ||||| ||| Sbjct: 6898154 aggatattcacgccgaggcagtcaagaagaggcgccgcaccaccaagaaaccgtactccc 6898213 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||| || || |||||| | |||||||| |||||||||||||||||||||||||| |||| Sbjct: 6898214 ggtctatagttggtgctacccttgaagtcatccagaagaagagagctgagaagccagagg 6898273 Query: 412 tccgtgatgcagcaagggaa 431 | |||||||||||||||||| Sbjct: 6898274 ttcgtgatgcagcaagggaa 6898293 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 207 aactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatggacg 266 ||||| ||||||||||||||||||||||||||||| | ||| || ||||| |||||||| Sbjct: 6897790 aactcgaagtgcaagcgctacttccacaaccgtctgaagccagccaagcttacatggaca 6897849 Query: 267 gccatgttcaggaagcagcacaagaagg 294 ||||||| ||| |||||||||||||||| Sbjct: 6897850 gccatgtacagaaagcagcacaagaagg 6897877 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 116 gacagagctctgccgtttcagtggtgccaagatataccccgggaagggtatcagattcat 175 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 6897615 gacagagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcat 6897674 Query: 176 ccgttcagactc 187 |||| ||||||| Sbjct: 6897675 ccgtgcagactc 6897686 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||| |||||||||||||| ||||| ||||||| Sbjct: 6898636 gtgagatcaaggagcgcatcaagaagacaaaggacgagaaga 6898677
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 |||||||||| || ||||| | |||||||| | |||||||||||||| ||||| ||| Sbjct: 21969 aggatattcacgccgaggcagtcaagaagaggcgccgcaccaccaagaaaccgtactccc 22028 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||| || || |||||| | |||||||| |||||||||||||||||||||||||| |||| Sbjct: 22029 ggtctatagttggtgctacccttgaagtcatccagaagaagagagctgagaagccagagg 22088 Query: 412 tccgtgatgcagcaagggaa 431 | |||||||||||||||||| Sbjct: 22089 ttcgtgatgcagcaagggaa 22108 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 207 aactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatggacg 266 ||||| ||||||||||||||||||||||||||||| | ||| || ||||| |||||||| Sbjct: 21605 aactcgaagtgcaagcgctacttccacaaccgtctgaagccagccaagcttacatggaca 21664 Query: 267 gccatgttcaggaagcagcacaagaagg 294 ||||||| ||| |||||||||||||||| Sbjct: 21665 gccatgtacagaaagcagcacaagaagg 21692 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 116 gacagagctctgccgtttcagtggtgccaagatataccccgggaagggtatcagattcat 175 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 21430 gacagagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcat 21489 Query: 176 ccgttcagactc 187 |||| ||||||| Sbjct: 21490 ccgtgcagactc 21501 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||| |||||||||||||| ||||| ||||||| Sbjct: 22451 gtgagatcaaggagcgcatcaagaagacaaaggacgagaaga 22492
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 127 bits (64), Expect = 4e-26 Identities = 121/140 (86%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 |||||||||| || ||||| | |||||||| | |||||||||||||| ||||| ||| Sbjct: 54409 aggatattcacgccgaggcagtcaagaagaggcgccgcaccaccaagaaaccgtactccc 54468 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||| || || |||||| | |||||||| |||||||||||||||||||||||||| |||| Sbjct: 54469 ggtctatagttggtgctacccttgaagtcatccagaagaagagagctgagaagccagagg 54528 Query: 412 tccgtgatgcagcaagggaa 431 | |||||||||||||||||| Sbjct: 54529 ttcgtgatgcagcaagggaa 54548 Score = 103 bits (52), Expect = 5e-19 Identities = 79/88 (89%) Strand = Plus / Plus Query: 207 aactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatggacg 266 ||||| ||||||||||||||||||||||||||||| | ||| || ||||| |||||||| Sbjct: 54045 aactcgaagtgcaagcgctacttccacaaccgtctgaagccagccaagcttacatggaca 54104 Query: 267 gccatgttcaggaagcagcacaagaagg 294 ||||||| ||| |||||||||||||||| Sbjct: 54105 gccatgtacagaaagcagcacaagaagg 54132 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 116 gacagagctctgccgtttcagtggtgccaagatataccccgggaagggtatcagattcat 175 ||||||||| ||||||||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 53870 gacagagctgtgccgtttcagcggcgccaagatttacccagggaagggtatcagattcat 53929 Query: 176 ccgttcagactc 187 |||| ||||||| Sbjct: 53930 ccgtgcagactc 53941 Score = 60.0 bits (30), Expect = 7e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||| |||||||||||||| ||||| ||||||| Sbjct: 54891 gtgagatcaaggagcgcatcaagaagacaaaggacgagaaga 54932
>ref|NM_115162.2| Arabidopsis thaliana structural constituent of ribosome AT3G53020 mRNA, complete cds Length = 787 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaaga 492 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 268 catggactgccatgtacagaaagcaacacaagaaggat 305
>gb|AY093180.1| Arabidopsis thaliana 60S ribosomal protein-like (At3g53020) mRNA, complete cds Length = 728 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 294 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 353 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 354 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 413 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 414 aggaaagaatcaaaaagaccaaagatgaaaaga 446 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 222 catggactgccatgtacagaaagcaacacaagaaggat 259
>dbj|AB199790.1| Arabidopsis thaliana STV1 mRNA for ribosomal protein L24, complete cds Length = 684 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 275 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 334 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 335 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 394 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 395 aggaaagaatcaaaaagaccaaagatgaaaaga 427 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtgg 139 |||||||| ||||||||||| || ||||||||||| Sbjct: 49 atggttctcaagacagagctttgtcgtttcagtgg 83 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 203 catggactgccatgtacagaaagcaacacaagaaggat 240
>gb|AY058129.1| Arabidopsis thaliana AT3g53020/F8J2_190 mRNA, complete cds Length = 787 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 340 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 399 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 400 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 459 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 460 aggaaagaatcaaaaagaccaaagatgaaaaga 492 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 268 catggactgccatgtacagaaagcaacacaagaaggat 305
>gb|BT006545.1| Arabidopsis thaliana At3g53020 gene, complete cds Length = 492 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 227 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 286 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 287 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 346 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 347 aggaaagaatcaaaaagaccaaagatgaaaaga 379 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 155 catggactgccatgtacagaaagcaacacaagaaggat 192
>emb|BX822812.1|CNS0A77L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB65ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 708 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 261 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 320 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 321 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 380 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 381 aggaaagaatcaaaaagaccaaagatgaaaaga 413 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 189 catggactgccatgtacagaaagcaacacaagaaggat 226
>emb|BX826253.1|CNS0A6AJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 765 Score = 121 bits (61), Expect = 2e-24 Identities = 130/153 (84%) Strand = Plus / Plus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 318 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 377 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctctacgtgagatca 450 |||||||||||||||| || || ||||||||||| |||||||| ||||| |||||||||| Sbjct: 378 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctctgcgtgagatca 437 Query: 451 aggaacgcatcaagaagaccaaggatgagaaga 483 ||||| | ||||| |||||||| ||||| |||| Sbjct: 438 aggaaagaatcaaaaagaccaaagatgaaaaga 470 Score = 44.1 bits (22), Expect = 0.43 Identities = 34/38 (89%) Strand = Plus / Plus Query: 259 catggacggccatgttcaggaagcagcacaagaaggat 296 ||||||| ||||||| ||| ||||| |||||||||||| Sbjct: 246 catggactgccatgtacagaaagcaacacaagaaggat 283
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02, complete sequence Length = 127642 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 ||||||| |||||||| |||| |||||||| | |||||||||||||| ||| || || | Sbjct: 76457 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 76398 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||||||||| ||||||||| | ||||| ||||| |||||||||||||| ||||| || | Sbjct: 76397 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 76338 Query: 412 tccgtgatgcagcaagggaagcagctct 439 | |||||||| || || ||||| ||||| Sbjct: 76337 ttcgtgatgctgctagagaagctgctct 76310 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 192 gtcttccttttctccaactcaaagtgcaagcgctacttccacaaccgtctcaggcctgct 251 ||||||||||| | |||||||| ||||||||||||||||||||||| || | |||||| Sbjct: 77042 gtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgca 76983 Query: 252 aagctcacatggacggccatgttcaggaagcagcacaagaagg 294 ||||| || ||||| ||||||| |||||||||||||||||||| Sbjct: 76982 aagcttacctggacagccatgtacaggaagcagcacaagaagg 76940 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 75933 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaaga 75892
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 2e-21 Identities = 125/148 (84%) Strand = Plus / Minus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 ||||||| |||||||| |||| |||||||| | |||||||||||||| ||| || || | Sbjct: 23795636 aggatatccatgctgaagctgtcaagaagaggcgccgcaccaccaagaagccatactcta 23795577 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||||||||| ||||||||| | ||||| ||||| |||||||||||||| ||||| || | Sbjct: 23795576 ggtcaattgttggtgcttcgttggaagtcatccaaaagaagagagctgaaaagcctgaag 23795517 Query: 412 tccgtgatgcagcaagggaagcagctct 439 | |||||||| || || ||||| ||||| Sbjct: 23795516 ttcgtgatgctgctagagaagctgctct 23795489 Score = 109 bits (55), Expect = 9e-21 Identities = 91/103 (88%) Strand = Plus / Minus Query: 192 gtcttccttttctccaactcaaagtgcaagcgctacttccacaaccgtctcaggcctgct 251 ||||||||||| | |||||||| ||||||||||||||||||||||| || | |||||| Sbjct: 23796221 gtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccgcctgaagcctgca 23796162 Query: 252 aagctcacatggacggccatgttcaggaagcagcacaagaagg 294 ||||| || ||||| ||||||| |||||||||||||||||||| Sbjct: 23796161 aagcttacctggacagccatgtacaggaagcagcacaagaagg 23796119 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23795112 gtgagatcaaggaacgcatcaagaagaccaaggatgaaaaga 23795071
>dbj|AB118010.1| Oryza sativa (japonica cultivar-group) bip123 mRNA for BRI1-KD interacting protein 123, partial cds Length = 461 Score = 109 bits (55), Expect = 9e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 375 gaagttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagca 434 ||||||||||| |||||||| |||||| || || |||||||||||||| || ||||| Sbjct: 14 gaagttatccaaaagaagaggagtgagaaacctgaagtccgtgatgcagccagagaagcg 73 Query: 435 gctctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaa 481 ||||| |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 74 gctctccgtgagatcaaggagcgcatcaagaaaaccaaggatgagaa 120
>gb|AY310767.1| Nicotiana benthamiana clone 7-269 unknown mRNA Length = 375 Score = 95.6 bits (48), Expect = 1e-16 Identities = 161/196 (82%), Gaps = 2/196 (1%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 |||||||| ||||| || || || ||||| ||||||| ||||||||| || || | ||| Sbjct: 8 atggttctcaagacggaactatgtcgttttagtggtggcaagatatatcctggaaggggc 67 Query: 165 atcagattcatccgttcagactctcaagtcttcct-tttctccaactcaaagtgcaagcg 223 |||||||| || |||||||| ||||| || ||||| |||||| |||||||| ||||| || Sbjct: 68 atcagatttattcgttcagattctcaggtgttcctatttctc-aactcaaaatgcaaacg 126 Query: 224 ctacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagca 283 ||||| ||||| || || | |||| | || || || ||||| || |||| ||||||||| Sbjct: 127 gtactttcacaatcgcctgaagccttccaaacttacttggacagctatgtacaggaagca 186 Query: 284 gcacaagaaggatatt 299 |||||||||||||||| Sbjct: 187 gcacaagaaggatatt 202 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctga 400 |||||||| ||||| ||||| | || || |||||||||||||||||| |||| Sbjct: 251 tccaggtccattgtgggtgcaaccctggaggttatccagaagaagagaactga 303
>ref|NM_129217.2| Arabidopsis thaliana structural constituent of ribosome AT2G36620 mRNA, complete cds Length = 682 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 320 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 379 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 380 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 425
>gb|AY114728.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 529 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 274 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 333 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 334 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 379
>gb|AY072350.1| Arabidopsis thaliana 60S ribosomal protein L24 (At2g36620) mRNA, complete cds Length = 674 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 314 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 373 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 374 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 419
>gb|AY058086.1| Arabidopsis thaliana At2g36620/F1O11.25 mRNA, complete cds Length = 675 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 312 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 371 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 372 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 417
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 205 ccaactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatgga 264 ||||||| || ||||||||||||||||||||||| || | |||||| ||||| || |||| Sbjct: 34677144 ccaactcgaaatgcaagcgctacttccacaaccgcctgaagcctgccaagcttacctgga 34677203 Query: 265 cggccatgttcaggaagcagcacaagaagg 294 | || |||| |||||||||||||||||||| Sbjct: 34677204 cagctatgtacaggaagcagcacaagaagg 34677233 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 |||| ||||||||||| |||| |||||||| | ||||||||||||| ||| || || Sbjct: 34677705 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 34677764 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||||||||| |||||| | || ||||||||||| |||||||| |||||| || || | Sbjct: 34677765 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 34677824 Query: 412 tccgtgatgcagcaagggaagcagctct 439 ||||||||||||| || ||||| ||||| Sbjct: 34677825 tccgtgatgcagccagagaagcggctct 34677852 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaa 481 ||||||||||||| ||||||||||| |||||||||||||| Sbjct: 34678213 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaa 34678252 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 aagatataccccgggaagggtatcagattcat 175 ||||||||||| || ||||||||||| ||||| Sbjct: 34676991 aagatatacccaggcaagggtatcaggttcat 34677022
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 205 ccaactcaaagtgcaagcgctacttccacaaccgtctcaggcctgctaagctcacatgga 264 ||||||| || ||||||||||||||||||||||| || | |||||| ||||| || |||| Sbjct: 129161 ccaactcgaaatgcaagcgctacttccacaaccgcctgaagcctgccaagcttacctgga 129220 Query: 265 cggccatgttcaggaagcagcacaagaagg 294 | || |||| |||||||||||||||||||| Sbjct: 129221 cagctatgtacaggaagcagcacaagaagg 129250 Score = 87.7 bits (44), Expect = 3e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 292 aggatattcatgctgaggctgcaaagaagagacaccgcaccaccaagaggccgtattcca 351 |||| ||||||||||| |||| |||||||| | ||||||||||||| ||| || || Sbjct: 129722 aggacattcatgctgaagctgtcaagaagaggcgtcgcaccaccaagaagccatactcac 129781 Query: 352 ggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccggagg 411 |||||||||| |||||| | || ||||||||||| |||||||| |||||| || || | Sbjct: 129782 ggtcaattgttggtgctacactggaagttatccaaaagaagaggagtgagaaacctgaag 129841 Query: 412 tccgtgatgcagcaagggaagcagctct 439 ||||||||||||| || ||||| ||||| Sbjct: 129842 tccgtgatgcagccagagaagcggctct 129869 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaa 481 ||||||||||||| ||||||||||| |||||||||||||| Sbjct: 130230 gtgagatcaaggagcgcatcaagaaaaccaaggatgagaa 130269 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 aagatataccccgggaagggtatcagattcat 175 ||||||||||| || ||||||||||| ||||| Sbjct: 129008 aagatatacccaggcaagggtatcaggttcat 129039
>gb|AY085323.1| Arabidopsis thaliana clone 14564 mRNA, complete sequence Length = 677 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 320 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 379 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 380 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 425
>emb|AJ293729.1|ATH293729 Arabidopsis thaliana partial mRNA for 60S ribosomal protein L24 (RL24 gene) Length = 1310 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| |||| |||||||| || || |||||||| || || ||||| || Sbjct: 301 gttattcagaagaagcgagcagagaagcctgaagttcgtgatgccgctagagaagctgcc 360 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 361 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 406
>emb|BX821500.1|CNS0A99G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Plus Query: 378 gttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagcagct 437 ||||| ||||||||| | || |||||||| || || |||||||| || || ||||| || Sbjct: 301 gttattcagaagaagcgggcagagaagcctgaagttcgtgatgccgctagagaagctgcc 360 Query: 438 ctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 361 ctacgtgagatcaaggagagaatcaagaagaccaaggacgagaaga 406
>emb|AL132969.2|ATF8J2 Arabidopsis thaliana DNA chromosome 3, BAC clone F8J2 Length = 99814 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 331 ccaccaagaggccgtattccaggtcaattgtaggtgcttcgcttgaagttatccagaaga 390 ||||||||| ||| || || ||||| ||||| |||||| | | ||||| || ||||||| Sbjct: 84487 ccaccaagaagccatactcaaggtccattgttggtgctaccttggaagtaattcagaaga 84428 Query: 391 agagagctgagaagccggaggtccgtgatgcagcaagggaagcagctct 439 |||||||||||||||| || || ||||||||||| |||||||| ||||| Sbjct: 84427 agagagctgagaagcctgaagttcgtgatgcagccagggaagctgctct 84379 Score = 44.1 bits (22), Expect = 0.43 Identities = 37/42 (88%) Strand = Plus / Minus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 |||||||||||||| | ||||| |||||||| ||||| |||| Sbjct: 84283 gtgagatcaaggaaagaatcaaaaagaccaaagatgaaaaga 84242
>gb|AY310816.1| Nicotiana benthamiana clone 12-370 unknown mRNA Length = 476 Score = 79.8 bits (40), Expect = 8e-12 Identities = 112/136 (82%) Strand = Plus / Plus Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccg 407 |||||||| ||||| ||||| | || || |||||||||||||||||| |||| | ||| Sbjct: 85 tccaggtccattgtgggtgcaaccctggaggttatccagaagaagagaactgaaaggcca 144 Query: 408 gaggtccgtgatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaag 467 || || | ||||| || ||||| || ||||| ||||| ||||||||| | ||||||||| Sbjct: 145 gaagttagagatgctgctagggaggctgctctccgtgaaatcaaggaaaggatcaagaag 204 Query: 468 accaaggatgagaaga 483 || ||||||||||||| Sbjct: 205 acaaaggatgagaaga 220 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 270 atgttcaggaagcagcacaagaaggatatt 299 |||| ||||||||||||||||||||||||| Sbjct: 7 atgtgcaggaagcagcacaagaaggatatt 36
>emb|AJ225027.1|CAR225027 Cicer arietinum mRNA for ribosomal protein L24 Length = 697 Score = 73.8 bits (37), Expect = 5e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 375 gaagttatccagaagaagagagctgagaagccggaggtccgtgatgcagcaagggaagca 434 ||||| || |||||||| ||| |||||||||| || || |||||||| || |||||||| Sbjct: 297 gaagtcattcagaagaaaagaactgagaagcctgaagttcgtgatgccgctagggaagct 356 Query: 435 gctctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||| ||||| || ||||| | |||||||| || ||||||||||||| Sbjct: 357 gctcttcgtgaaattaaggagagaatcaagaaaactaaggatgagaaga 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 141/179 (78%) Strand = Plus / Plus Query: 105 atggttctgaagacagagctctgccgtttcagtggtgccaagatataccccgggaagggt 164 |||||||| ||||| || || ||||| ||||||||||| ||||| ||||| || | || Sbjct: 27 atggttctcaagactgaactttgccgattcagtggtgcaaagatctacccaggaagagga 86 Query: 165 atcagattcatccgttcagactctcaagtcttccttttctccaactcaaagtgcaagcgc 224 |||||||| || ||| || ||||| || ||||| || |||||||| ||||| | Sbjct: 87 atcagatttattcgtggtgattctcaggttttcctgtttgttaactcaaaatgcaaaagg 146 Query: 225 tacttccacaaccgtctcaggcctgctaagctcacatggacggccatgttcaggaagca 283 || |||||||||||| | | |||| | ||||| || ||||| ||||||||||||||||| Sbjct: 147 tatttccacaaccgtttgaagccttcgaagcttacctggactgccatgttcaggaagca 205
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 192 gtcttccttttctccaactcaaagtgcaagcgctacttccacaaccg 238 ||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 56 gtcttcctttttgcaaactcaaaatgcaagcgctacttccacaaccg 10
>dbj|AK221088.1| Arabidopsis thaliana mRNA for 60S ribosomal protein - like, partial cds, clone: RAFL22-82-K11 Length = 343 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 428 ggaagcagctctacgtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 |||||| ||||| ||||||||||||||| | ||||| |||||||| ||||| |||| Sbjct: 1 ggaagctgctctgcgtgagatcaaggaaagaatcaaaaagaccaaagatgaaaaga 56
>emb|AJ617049.1| Nicotiana plumbaginifolia cDNA-AFLP fragment, clone Np221 Length = 322 Score = 54.0 bits (27), Expect = 4e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 417 gatgcagcaagggaagcagctctacgtgagatcaaggaacgcatcaagaagaccaaggat 476 ||||| || ||||| || ||||| ||||| ||||||||| | ||||||||||| |||||| Sbjct: 322 gatgctgctagggaggctgctctccgtgaaatcaaggaaagaatcaagaagacaaaggat 263 Query: 477 gagaaga 483 || |||| Sbjct: 262 gaaaaga 256
>gb|AC146788.13| Medicago truncatula clone mth2-11a6, complete sequence Length = 116349 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 126 tgccgtttcagtggtgccaagatataccccgggaagggtatcagattcatccgt 179 ||||| ||||||||||||||||| ||||| || | ||| |||||||| |||||| Sbjct: 107518 tgccgattcagtggtgccaagatctaccctggtagggggatcagatttatccgt 107465
>gb|AC139525.3| Medicago truncatula clone mth2-26o22, complete sequence Length = 103039 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 126 tgccgtttcagtggtgccaagatataccccgggaagggtatcagattcatccgt 179 ||||| ||||||||||||||||| ||||| || | ||| |||||||| |||||| Sbjct: 12227 tgccgattcagtggtgccaagatctaccctggtagggggatcagatttatccgt 12280
>gb|AC006919.6| Arabidopsis thaliana chromosome 2 clone F1O11 map g6825, complete sequence Length = 104364 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 99753 gtgagatcaaggagagaatcaagaagaccaaggacgagaaga 99712
>gb|AC006282.4| Arabidopsis thaliana chromosome 2 clone F13K3 map g6825, complete sequence Length = 92376 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 442 gtgagatcaaggaacgcatcaagaagaccaaggatgagaaga 483 ||||||||||||| | ||||||||||||||||| ||||||| Sbjct: 2077 gtgagatcaaggagagaatcaagaagaccaaggacgagaaga 2036
>dbj|AP006101.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT09A07, TM0181, complete sequence Length = 185320 Score = 48.1 bits (24), Expect = 0.027 Identities = 75/92 (81%) Strand = Plus / Plus Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccg 407 |||||||||||||| |||||| | | |||||||| ||||| | |||| |||| ||||| Sbjct: 61517 tccaggtcaattgttggtgctacattggaagttattcagaaaaggagaactgaaaagcct 61576 Query: 408 gaggtccgtgatgcagcaagggaagcagctct 439 ||||| || ||||| || || ||||| ||||| Sbjct: 61577 gaggttcgagatgctgctagagaagccgctct 61608
>dbj|AP004955.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT19K21, TM0132, complete sequence Length = 59303 Score = 48.1 bits (24), Expect = 0.027 Identities = 75/92 (81%) Strand = Plus / Plus Query: 348 tccaggtcaattgtaggtgcttcgcttgaagttatccagaagaagagagctgagaagccg 407 |||||||||||||| |||||| | | |||||||| ||||| | |||| |||| ||||| Sbjct: 40997 tccaggtcaattgttggtgctacattggaagttattcagaaaaggagaactgaaaagcct 41056 Query: 408 gaggtccgtgatgcagcaagggaagcagctct 439 ||||| || ||||| || || ||||| ||||| Sbjct: 41057 gaggttcgagatgctgctagagaagccgctct 41088
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 461 caagaagaccaaggatgagaag 482 |||||||||||||||||||||| Sbjct: 658998 caagaagaccaaggatgagaag 659019
>emb|AL669947.14| Mouse DNA sequence from clone RP23-434D24 on chromosome 1 Contains two novel genes and two CpG islands, complete sequence Length = 102304 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 103 agatggttctgaagacagagctctgc 128 ||||||||||||||||||||| |||| Sbjct: 17191 agatggttctgaagacagagccctgc 17166
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcaggaagcagcacaagaagg 294 ||||||||||||||||||||| Sbjct: 1661 tcaggaagcagcacaagaagg 1641
>emb|Z98259.1|HS58B11 Human DNA sequence from clone RP1-58B11 on chromosome 1p36.21-36.33, complete sequence Length = 22519 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 tttctccaactcaaagtgcaa 220 ||||||||||||||||||||| Sbjct: 8922 tttctccaactcaaagtgcaa 8902
>ref|XM_686602.1| PREDICTED: Danio rerio similar to DNA-binding protein (LOC563236), partial mRNA Length = 5207 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 262 ggacggccatgttcaggaagcagca 286 ||||||||||| ||||||||||||| Sbjct: 566 ggacggccatgctcaggaagcagca 590
>gb|AE003821.4| Drosophila melanogaster chromosome 2R, section 29 of 73 of the complete sequence Length = 294168 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcaggaagcagcacaagaagg 294 ||||||||||||||||||||| Sbjct: 216744 tcaggaagcagcacaagaagg 216724
>gb|AC016021.3|AC016021 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone BACR27F05, complete sequence Length = 158520 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcaggaagcagcacaagaagg 294 ||||||||||||||||||||| Sbjct: 153671 tcaggaagcagcacaagaagg 153651
>emb|AJ335154.1|HSA335154 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BF15C Length = 619 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 195 ttccttttctccaactcaaag 215 ||||||||||||||||||||| Sbjct: 480 ttccttttctccaactcaaag 500
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tcaggaagcagcacaagaagg 294 ||||||||||||||||||||| Sbjct: 38424 tcaggaagcagcacaagaagg 38404
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 agaaggatattcatgctgagg 309 ||||||||||||||||||||| Sbjct: 845541 agaaggatattcatgctgagg 845561
>ref|XM_525640.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ30473 (LOC470257), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 agaagaccaaggatgagaag 482 |||||||||||||||||||| Sbjct: 428 agaagaccaaggatgagaag 447
>ref|XM_466016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gccgcagccggagcccgccg 58 |||||||||||||||||||| Sbjct: 282 gccgcagccggagcccgccg 263
>gb|AC107452.10| Mus musculus chromosome 15, clone RP23-236C21, complete sequence Length = 180069 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccgcagccggagcccgccgc 59 |||||||||||||||||||| Sbjct: 118609 ccgcagccggagcccgccgc 118590
>gb|AC100737.18| Mus musculus chromosome 7, clone RP24-360I22, complete sequence Length = 148090 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gaagaccaaggatgagaaga 483 |||||||||||||||||||| Sbjct: 40503 gaagaccaaggatgagaaga 40522
>gb|AC099174.7| Rattus norvegicus 4 BAC CH230-98I1 (Children's Hospital Oakland Research Institute) complete sequence Length = 197530 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gatgcagcaagggaagcagc 436 |||||||||||||||||||| Sbjct: 22862 gatgcagcaagggaagcagc 22881
>ref|XM_980554.1| PREDICTED: Mus musculus triple functional domain (PTPRF interacting) (Trio), mRNA Length = 11491 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccgcagccggagcccgccgc 59 |||||||||||||||||||| Sbjct: 438 ccgcagccggagcccgccgc 419
>ref|XM_888341.2| PREDICTED: Mus musculus triple functional domain (PTPRF interacting), transcript variant 1 (Trio), mRNA Length = 11495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccgcagccggagcccgccgc 59 |||||||||||||||||||| Sbjct: 438 ccgcagccggagcccgccgc 419
>emb|AL451185.14| Human DNA sequence from clone RP11-136C6 on chromosome 6 Contains the KCNK5 gene for potassium channel subfamily K member 5 (TASK-2) and a CpG island, complete sequence Length = 101841 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 caagatggttctgaagacag 120 |||||||||||||||||||| Sbjct: 80873 caagatggttctgaagacag 80892
>ref|XM_505143.1| Yarrowia lipolytica CLIB122, YALI0F07975g predicted mRNA Length = 654 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ggcggacaagatggttctga 114 |||||||||||||||||||| Sbjct: 138 ggcggacaagatggttctga 119
>gb|AC160632.5| Mus musculus chromosome 8, clone RP24-319F9, complete sequence Length = 163311 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 cagaagaagagagctgagaa 403 |||||||||||||||||||| Sbjct: 139737 cagaagaagagagctgagaa 139756
>gb|AC090229.15| Homo sapiens chromosome 18, clone RP11-873E20, complete sequence Length = 192106 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggccatgttcaggaagcagc 285 |||||||||||||||||||| Sbjct: 5002 ggccatgttcaggaagcagc 4983
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 458 catcaagaagaccaaggatgagaa 481 ||||||||||| |||||||||||| Sbjct: 5841427 catcaagaagaacaaggatgagaa 5841404
>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence Length = 194334 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 ggccatgttcaggaagcagc 285 |||||||||||||||||||| Sbjct: 158130 ggccatgttcaggaagcagc 158111
>gb|DQ401085.1| Chlamydomonas sp. ICE-L 60S ribosomal protein mRNA, complete cds Length = 634 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 384 cagaagaagagagctgagaagccggaggtccg 415 |||| |||||| ||||||||||| |||||||| Sbjct: 310 cagaggaagagggctgagaagcctgaggtccg 341
>gb|DP000043.1| Macaca mulatta target 106 genomic scaffold Length = 373358 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 gcatcaagaagaccaaggat 476 |||||||||||||||||||| Sbjct: 272511 gcatcaagaagaccaaggat 272492
>gb|AC010388.6| Homo sapiens chromosome 5 clone CTD-2075D11, complete sequence Length = 159766 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 caagatggttctgaagacag 120 |||||||||||||||||||| Sbjct: 123387 caagatggttctgaagacag 123406
>gb|AC153419.13| Mus musculus 10 BAC RP23-291D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199606 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 ctctcaagtcttccttttct 204 |||||||||||||||||||| Sbjct: 181631 ctctcaagtcttccttttct 181612
>gb|AC002472.8| Homo sapiens Chromosome 22q11.2 PAC Clone p_n5 In BCRL2-GGT Region, complete sequence Length = 147086 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 agaagaccaaggatgagaag 482 |||||||||||||||||||| Sbjct: 11550 agaagaccaaggatgagaag 11569
>gb|AC002470.17| Homo sapiens Chromosome 22q11.2 BAC Clone b135h6 In BCRL2-GGT Region, complete sequence Length = 235395 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 463 agaagaccaaggatgagaag 482 |||||||||||||||||||| Sbjct: 203054 agaagaccaaggatgagaag 203073
>gb|AC153906.4| Mus musculus 10 BAC RP23-191C14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209293 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ctctcaagtcttccttttct 204 |||||||||||||||||||| Sbjct: 183994 ctctcaagtcttccttttct 184013
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gccgcagccggagcccgccg 58 |||||||||||||||||||| Sbjct: 19104561 gccgcagccggagcccgccg 19104542
>dbj|AB197153.1| Takifugu rubripes RAF1 mRNA for serine/threonine protein kinase RAF1, complete cds Length = 2106 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gcatcaagaagaccaaggatgaga 480 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence Length = 185573 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 agagctgagaagccggaggt 412 |||||||||||||||||||| Sbjct: 51191 agagctgagaagccggaggt 51172
>ref|XM_226888.3| PREDICTED: Rattus norvegicus triple functional domain (PTPRF interacting) (predicted) (Trio_predicted), mRNA Length = 9468 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ccgcagccggagcccgccgc 59 |||||||||||||||||||| Sbjct: 92 ccgcagccggagcccgccgc 73
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gccgcagccggagcccgccg 58 |||||||||||||||||||| Sbjct: 2810 gccgcagccggagcccgccg 2791
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gccgcagccggagcccgccg 58 |||||||||||||||||||| Sbjct: 110082 gccgcagccggagcccgccg 110063
>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence Length = 182204 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 agagctgagaagccggaggt 412 |||||||||||||||||||| Sbjct: 11264 agagctgagaagccggaggt 11283
>gb|AC102534.10| Mus musculus chromosome 8, clone RP23-57G23, complete sequence Length = 223998 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 cagaagaagagagctgagaa 403 |||||||||||||||||||| Sbjct: 1379 cagaagaagagagctgagaa 1398
>ref|NM_001037989.1| Takifugu rubripes serine/threonine protein kinase RAF1 (raf1), mRNA Length = 2106 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 457 gcatcaagaagaccaaggatgaga 480 ||||||||||| |||||||||||| Sbjct: 1876 gcatcaagaagtccaaggatgaga 1899
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence Length = 232098 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 464 gaagaccaaggatgagaaga 483 |||||||||||||||||||| Sbjct: 26542 gaagaccaaggatgagaaga 26523
>gb|AC165077.3| Mus musculus BAC clone RP24-369J8 from chromosome 7, complete sequence Length = 179228 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 gaagaccaaggatgagaaga 483 |||||||||||||||||||| Sbjct: 49480 gaagaccaaggatgagaaga 49499 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,224,366 Number of Sequences: 3902068 Number of extensions: 4224366 Number of successful extensions: 77074 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76768 Number of HSP's gapped (non-prelim): 298 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
