ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal1o03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2057 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 956 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 1015 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 1016 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 1075 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 1076 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 1135 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 1136 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 1195 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 1196 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 1255 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 1256 atacagatccgcgtgt 1271
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Minus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 10088443 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 10088384 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 10088383 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 10088324 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 10088323 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 10088264 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 10088263 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 10088204 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 10088203 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 10088144 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 10088143 atacagatccgcgtgt 10088128 Score = 184 bits (93), Expect = 2e-43 Identities = 252/305 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 10129203 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 10129262 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 10129263 gacgagcagcagcgcctcctccgtggcacgccgtggctgctgatgaagacggacagctac 10129322 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 10129323 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 10129382 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 10129383 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 10129442 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 10129443 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 10129502 Query: 466 ataca 470 ||||| Sbjct: 10129503 ataca 10129507 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| |||||||| |||| |||| ||| ||| ||||||||| | | || Sbjct: 32211467 gtggctggtgatgaggacggacacctacatcgtgccgtcgctgttcctggtcaccacgtt 32211526 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | | ||||||||| ||| |||| |||||||||| || Sbjct: 32211527 ccaggacgagctcgacgcgctcttcccggagcgcgacgccgtgttccaccacctcggccg 32211586 Query: 378 gtacctgttccacccgg 394 ||||||||||||||||| Sbjct: 32211587 gtacctgttccacccgg 32211603 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 ggcgccggcgagcgcgtcggc 465 ||||||||||||||||||||| Sbjct: 19472427 ggcgccggcgagcgcgtcggc 19472447
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Minus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 163136 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 163077 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 163076 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 163017 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 163016 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 162957 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 162956 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 162897 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 162896 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 162837 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 162836 atacagatccgcgtgt 162821
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Minus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 36137 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 36078 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 36077 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 36018 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 36017 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 35958 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 35957 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 35898 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 35897 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 35838 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 35837 atacagatccgcgtgt 35822 Score = 184 bits (93), Expect = 2e-43 Identities = 252/305 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 76897 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 76956 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 76957 gacgagcagcagcgcctcctccgtggcacgccgtggctgctgatgaagacggacagctac 77016 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 77017 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 77076 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 77077 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 77136 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 77137 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 77196 Query: 466 ataca 470 ||||| Sbjct: 77197 ataca 77201
>dbj|AK071664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B19, full insert sequence Length = 2056 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 955 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 1014 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 1015 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 1074 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 1075 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 1134 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 1135 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 1194 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 1195 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 1254 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 1255 atacagatccgcgtgt 1270
>dbj|AK060517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A08, full insert sequence Length = 1612 Score = 198 bits (100), Expect = 1e-47 Identities = 262/316 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 480 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 539 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 540 gacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctac 599 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 600 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 659 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 660 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 719 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 720 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 779 Query: 466 atacaaatccgggtgt 481 ||||| ||||| |||| Sbjct: 780 atacagatccgcgtgt 795
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 184 bits (93), Expect = 2e-43 Identities = 252/305 (82%) Strand = Plus / Plus Query: 166 ccgttcgtctacctgcacctcgagggcggctacgacttccacgacaagctcttctactgc 225 |||| ||| ||||| |||||||| |||||| ||||| |||||||||||| ||||||||| Sbjct: 1569 ccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgc 1628 Query: 226 gacgagcaccaacggctcctccacggcgcgccgtggctgctgatgaagacggacagctac 285 |||||||| || || ||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 1629 gacgagcagcagcgcctcctccgtggcacgccgtggctgctgatgaagacggacagctac 1688 Query: 286 ctcgtcccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccg 345 |||||||||||||||||||| || ||||| ||| | |||||||| ||||||||||| Sbjct: 1689 ctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccg 1748 Query: 346 gagaaggacctgacgttctaccacctcggacggtacctgttccacccggttaacgacgtg 405 ||||||||| |||| |||||||| | || ||||| ||||||||| |||| ||| Sbjct: 1749 gagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtc 1808 Query: 406 tggcgcgcagtcaccagttactaccgcaccaacctcgccggcgccggcgagcgcgtcggc 465 |||| ||| |||| ||| ||||| | ||||||||||||||||| | | ||||||| Sbjct: 1809 tggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggc 1868 Query: 466 ataca 470 ||||| Sbjct: 1869 ataca 1873
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 ||||||||| |||||| ||||||||||||| |||| ||||| || ||||| ||| | | Sbjct: 5730377 ccgtggctggtgatgaggacggacagctacatcgtgccgggtctgttcctcgtcaccgga 5730318 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 |||||||||||||||| | | | |||||||||| |||| |||| |||||||||| Sbjct: 5730317 ttccaggacgagctcgactcgctcttcccggagacggacgccgtgttccaccacctcggc 5730258 Query: 376 cggtacctgttccacccg 393 || ||||||||||||||| Sbjct: 5730257 cgctacctgttccacccg 5730240 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 |||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | | Sbjct: 5736744 ccgtggcttgtgatgaggacggacagctacatcgtgccggggctgttcctcgtcaccgga 5736803 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 ||||||| ||||||| | | | |||||||||| |||| |||| ||||||||| | Sbjct: 5736804 ttccaggcggagctcgactcgctcttcccggagacggacgccgtgttccaccacctcgca 5736863 Query: 376 cggtacctgttccacccg 393 |||||||||||||||||| Sbjct: 5736864 cggtacctgttccacccg 5736881 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | || Sbjct: 5723952 gtggctggtgatgaggacggacagctacatcgtgccggggctgttcctcgtcgacgcgtt 5723893 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | ||||||||||| ||| |||| |||||||||| || Sbjct: 5723892 ccaggacgagctcgccgcgctgttcccggagcgcgacgccgtgttccaccacctcggccg 5723833 Query: 378 gtacctgttccacccg 393 ||||||||||||||| Sbjct: 5723832 ctacctgttccacccg 5723817 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 204 ccacgacaagctcttctactgcgacga 230 ||||||||||||||||||||||||||| Sbjct: 5743856 ccacgacaagctcttctactgcgacga 5743882 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 316 ttccaggacgagctcggcaggatgttcccggagaagga 353 ||||||||||||||| | ||||||||||||||||||| Sbjct: 5716978 ttccaggacgagctccggtggatgttcccggagaagga 5716941 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 201 cttccacgacaagctcttctactgcgacga 230 ||||||||||||| |||||| ||||||||| Sbjct: 5736689 cttccacgacaagttcttcttctgcgacga 5736718 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 439 ctcgccggcgccggcgagcgcgtcggcat 467 ||||||||||||| ||||||| ||||||| Sbjct: 5745968 ctcgccggcgccgacgagcgcctcggcat 5745940 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 14232151 cgccggcgccggcgagcgcg 14232132
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 ||||||||| |||||| ||||||||||||| |||| ||||| || ||||| ||| | | Sbjct: 45906 ccgtggctggtgatgaggacggacagctacatcgtgccgggtctgttcctcgtcaccgga 45847 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 |||||||||||||||| | | | |||||||||| |||| |||| |||||||||| Sbjct: 45846 ttccaggacgagctcgactcgctcttcccggagacggacgccgtgttccaccacctcggc 45787 Query: 376 cggtacctgttccacccg 393 || ||||||||||||||| Sbjct: 45786 cgctacctgttccacccg 45769 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 |||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | | Sbjct: 52273 ccgtggcttgtgatgaggacggacagctacatcgtgccggggctgttcctcgtcaccgga 52332 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 ||||||| ||||||| | | | |||||||||| |||| |||| ||||||||| | Sbjct: 52333 ttccaggcggagctcgactcgctcttcccggagacggacgccgtgttccaccacctcgca 52392 Query: 376 cggtacctgttccacccg 393 |||||||||||||||||| Sbjct: 52393 cggtacctgttccacccg 52410 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | || Sbjct: 39481 gtggctggtgatgaggacggacagctacatcgtgccggggctgttcctcgtcgacgcgtt 39422 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | ||||||||||| ||| |||| |||||||||| || Sbjct: 39421 ccaggacgagctcgccgcgctgttcccggagcgcgacgccgtgttccaccacctcggccg 39362 Query: 378 gtacctgttccacccg 393 ||||||||||||||| Sbjct: 39361 ctacctgttccacccg 39346 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 204 ccacgacaagctcttctactgcgacga 230 ||||||||||||||||||||||||||| Sbjct: 59385 ccacgacaagctcttctactgcgacga 59411 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 316 ttccaggacgagctcggcaggatgttcccggagaagga 353 ||||||||||||||| | ||||||||||||||||||| Sbjct: 32507 ttccaggacgagctccggtggatgttcccggagaagga 32470 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 201 cttccacgacaagctcttctactgcgacga 230 ||||||||||||| |||||| ||||||||| Sbjct: 52218 cttccacgacaagttcttcttctgcgacga 52247 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 439 ctcgccggcgccggcgagcgcgtcggcat 467 ||||||||||||| ||||||| ||||||| Sbjct: 61497 ctcgccggcgccgacgagcgcctcggcat 61469
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 ||||||||| |||||| ||||||||||||| |||| ||||| || ||||| ||| | | Sbjct: 122524 ccgtggctggtgatgaggacggacagctacatcgtgccgggtctgttcctcgtcaccgga 122465 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 |||||||||||||||| | | | |||||||||| |||| |||| |||||||||| Sbjct: 122464 ttccaggacgagctcgactcgctcttcccggagacggacgccgtgttccaccacctcggc 122405 Query: 376 cggtacctgttccacccg 393 || ||||||||||||||| Sbjct: 122404 cgctacctgttccacccg 122387 Score = 67.9 bits (34), Expect = 3e-08 Identities = 112/138 (81%) Strand = Plus / Plus Query: 256 ccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtca 315 |||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | | Sbjct: 128891 ccgtggcttgtgatgaggacggacagctacatcgtgccggggctgttcctcgtcaccgga 128950 Query: 316 ttccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcgga 375 ||||||| ||||||| | | | |||||||||| |||| |||| ||||||||| | Sbjct: 128951 ttccaggcggagctcgactcgctcttcccggagacggacgccgtgttccaccacctcgca 129010 Query: 376 cggtacctgttccacccg 393 |||||||||||||||||| Sbjct: 129011 cggtacctgttccacccg 129028 Score = 63.9 bits (32), Expect = 5e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | || Sbjct: 116099 gtggctggtgatgaggacggacagctacatcgtgccggggctgttcctcgtcgacgcgtt 116040 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | ||||||||||| ||| |||| |||||||||| || Sbjct: 116039 ccaggacgagctcgccgcgctgttcccggagcgcgacgccgtgttccaccacctcggccg 115980 Query: 378 gtacctgttccacccg 393 ||||||||||||||| Sbjct: 115979 ctacctgttccacccg 115964 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 204 ccacgacaagctcttctactgcgacga 230 ||||||||||||||||||||||||||| Sbjct: 136003 ccacgacaagctcttctactgcgacga 136029 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 316 ttccaggacgagctcggcaggatgttcccggagaagga 353 ||||||||||||||| | ||||||||||||||||||| Sbjct: 109125 ttccaggacgagctccggtggatgttcccggagaagga 109088 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 201 cttccacgacaagctcttctactgcgacga 230 ||||||||||||| |||||| ||||||||| Sbjct: 128836 cttccacgacaagttcttcttctgcgacga 128865 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 439 ctcgccggcgccggcgagcgcgtcggcat 467 ||||||||||||| ||||||| ||||||| Sbjct: 138115 ctcgccggcgccgacgagcgcctcggcat 138087
>dbj|AK103086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118I03, full insert sequence Length = 1873 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| ||||||||||||| |||| |||||||| ||||| ||| | || Sbjct: 892 gtggctggtgatgaggacggacagctacatcgtgccggggctgttcctcgtcgacgcgtt 951 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | ||||||||||| ||| |||| |||||||||| || Sbjct: 952 ccaggacgagctcgccgcgctgttcccggagcgcgacgccgtgttccaccacctcggccg 1011 Query: 378 gtacctgttccacccgg 394 |||||||||||||||| Sbjct: 1012 ctacctgttccacccgg 1028
>ref|XM_467944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| |||||||| |||| |||| ||| ||| ||||||||| | | || Sbjct: 1037 gtggctggtgatgaggacggacacctacatcgtgccgtcgctgttcctggtcaccacgtt 1096 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | | ||||||||| ||| |||| |||||||||| || Sbjct: 1097 ccaggacgagctcgacgcgctcttcccggagcgcgacgccgtgttccaccacctcggccg 1156 Query: 378 gtacctgttccacccgg 394 ||||||||||||||||| Sbjct: 1157 gtacctgttccacccgg 1173
>dbj|AP004817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0539D10 Length = 158691 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| |||||||| |||| |||| ||| ||| ||||||||| | | || Sbjct: 55480 gtggctggtgatgaggacggacacctacatcgtgccgtcgctgttcctggtcaccacgtt 55539 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | | ||||||||| ||| |||| |||||||||| || Sbjct: 55540 ccaggacgagctcgacgcgctcttcccggagcgcgacgccgtgttccaccacctcggccg 55599 Query: 378 gtacctgttccacccgg 394 ||||||||||||||||| Sbjct: 55600 gtacctgttccacccgg 55616
>dbj|AK102499.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095B15, full insert sequence Length = 2043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 258 gtggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcatt 317 ||||||| |||||| |||||||| |||| |||| ||| ||| ||||||||| | | || Sbjct: 1037 gtggctggtgatgaggacggacacctacatcgtgccgtcgctgttcctggtcaccacgtt 1096 Query: 318 ccaggacgagctcggcaggatgttcccggagaaggacctgacgttctaccacctcggacg 377 |||||||||||||| | | | ||||||||| ||| |||| |||||||||| || Sbjct: 1097 ccaggacgagctcgacgcgctcttcccggagcgcgacgccgtgttccaccacctcggccg 1156 Query: 378 gtacctgttccacccgg 394 ||||||||||||||||| Sbjct: 1157 gtacctgttccacccgg 1173
>dbj|AK071124.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080C23, full insert sequence Length = 1805 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 204 ccacgacaagctcttctactgcgacga 230 ||||||||||||||||||||||||||| Sbjct: 790 ccacgacaagctcttctactgcgacga 816
>ref|XM_462666.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1743 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 360 gttctaccacctcggacggtacctgttccacccg 393 |||| |||||||||| || ||||||||||||||| Sbjct: 1008 gttccaccacctcggccgctacctgttccacccg 1041
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 439 ctcgccggcgccggcgagcgcg 460 |||||||||||||||||||||| Sbjct: 94326 ctcgccggcgccggcgagcgcg 94347
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 360 gttctaccacctcggacggtacctgttccacccg 393 |||| |||||||||| || ||||||||||||||| Sbjct: 22356874 gttccaccacctcggccgctacctgttccacccg 22356841
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 442 gccggcgccggcgagcgcgtcg 463 |||||||||||||||||||||| Sbjct: 1878109 gccggcgccggcgagcgcgtcg 1878088 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gccggcgccggcgagcgcgtcggc 465 ||||||| |||||||||||||||| Sbjct: 4625077 gccggcggcggcgagcgcgtcggc 4625100 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagcgcg 460 ||||||||| |||||||||||||| Sbjct: 2342417 acctcgccgccgccggcgagcgcg 2342394
>dbj|AK110929.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D11, full insert sequence Length = 2078 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 360 gttctaccacctcggacggtacctgttccacccg 393 |||| |||||||||| || ||||||||||||||| Sbjct: 1195 gttccaccacctcggccgctacctgttccacccg 1228
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 444 cggcgccggcgagcgcgtcggc 465 |||||||||||||||||||||| Sbjct: 2568848 cggcgccggcgagcgcgtcggc 2568827
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 360 gttctaccacctcggacggtacctgttccacccg 393 |||| |||||||||| || ||||||||||||||| Sbjct: 107778 gttccaccacctcggccgctacctgttccacccg 107745
>ref|XM_550257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1887 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 1484 acctcgccggcgccggcgagc 1504
>ref|XM_466075.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1910 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ggcgccggcgagcgcgtcggc 465 ||||||||||||||||||||| Sbjct: 552 ggcgccggcgagcgcgtcggc 532
>ref|XM_753611.1| Ustilago maydis 521 hypothetical protein (UM02557.1) partial mRNA Length = 2295 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 447 cgccggcgagcgcgtcggcatacaa 471 ||||||| ||||||||||||||||| Sbjct: 500 cgccggctagcgcgtcggcatacaa 524
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 cggcggtgaccgccggccacc 167 ||||||||||||||||||||| Sbjct: 5691 cggcggtgaccgccggccacc 5711
>gb|AC011921.14| Homo sapiens chromosome 17, clone RP11-15E18, complete sequence Length = 153922 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 agcctcggcaacatgctgaaa 99 ||||||||||||||||||||| Sbjct: 132656 agcctcggcaacatgctgaaa 132676
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 caacctcgccggcgccggcga 455 ||||||||||||||||||||| Sbjct: 91375 caacctcgccggcgccggcga 91355
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 cggcgccggcgagcgcgtcgg 464 ||||||||||||||||||||| Sbjct: 4499892 cggcgccggcgagcgcgtcgg 4499912 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 3438191 cgccggcgccggcgagcgcg 3438210
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 4744801 acctcgccggcgccggcgagc 4744781
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 caacctcgccggcgccggcga 455 ||||||||||||||||||||| Sbjct: 21916946 caacctcgccggcgccggcga 21916966 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 20218289 cgccggcgccggcgagcgcg 20218270 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 260 ggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcattcc 319 ||||| |||||| |||||||| |||| |||| || ||| ||||||||| | | |||| Sbjct: 1574589 ggctggtgatgaggacggacacctacatcgtgccatcgctgttcctggtcaccacgttcc 1574648 Query: 320 aggacgagctcg 331 |||||||||||| Sbjct: 1574649 aggacgagctcg 1574660
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 292 ccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccggagaag 351 |||||||| |||||||| ||| ||| ||||||||||| | |||||||||||| || | Sbjct: 17261775 ccggggctgttcctggtgccgcagttcgaggacgagctccggtggatgttcccggcgagg 17261716 Query: 352 gacctgacgttctaccacctcggacggtacctgttccaccc 392 ||| | |||| |||| |||| |||||||||||||||| Sbjct: 17261715 gacacggtgttccaccatatcgggaggtacctgttccaccc 17261675
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 3465037 acctcgccggcgccggcgagc 3465017
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 ggcgccggcgagcgcgtcggc 465 ||||||||||||||||||||| Sbjct: 89954 ggcgccggcgagcgcgtcggc 89974
>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0701D05 Length = 172161 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 143407 acctcgccggcgccggcgagc 143387
>dbj|AP003339.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1276_B06 Length = 175174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 33105 acctcgccggcgccggcgagc 33085
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Minus Query: 292 ccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccggagaag 351 |||||||| |||||||| ||| ||| ||||||||||| | |||||||||||| || | Sbjct: 48647 ccggggctgttcctggtgccgcagttcgaggacgagctccggtggatgttcccggcgagg 48588 Query: 352 gacctgacgttctaccacctcggacggtacctgttccaccc 392 ||| | |||| |||| |||| |||||||||||||||| Sbjct: 48587 gacacggtgttccaccatatcgggaggtacctgttccaccc 48547
>gb|AF512031.3| Choristoneura fumiferana MNPV polyhedrin, complete genome Length = 129593 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 cacgacaagctcttctactgc 225 ||||||||||||||||||||| Sbjct: 19364 cacgacaagctcttctactgc 19384
>dbj|AK109895.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-F01, full insert sequence Length = 1562 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 caacctcgccggcgccggcga 455 ||||||||||||||||||||| Sbjct: 1215 caacctcgccggcgccggcga 1235
>dbj|AK109625.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B10, full insert sequence Length = 1866 Score = 42.1 bits (21), Expect = 2.0 Identities = 81/101 (80%) Strand = Plus / Plus Query: 292 ccggggctcttcctggtcccgtcattccaggacgagctcggcaggatgttcccggagaag 351 |||||||| |||||||| ||| ||| ||||||||||| | |||||||||||| || | Sbjct: 948 ccggggctgttcctggtgccgcagttcgaggacgagctccggtggatgttcccggcgagg 1007 Query: 352 gacctgacgttctaccacctcggacggtacctgttccaccc 392 ||| | |||| |||| |||| |||||||||||||||| Sbjct: 1008 gacacggtgttccaccatatcgggaggtacctgttccaccc 1048
>dbj|AK100984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145D01, full insert sequence Length = 1910 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 445 ggcgccggcgagcgcgtcggc 465 ||||||||||||||||||||| Sbjct: 552 ggcgccggcgagcgcgtcggc 532
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 ggggctcttcctggtcccgtcattc 318 ||||||||||||||||| ||||||| Sbjct: 414959 ggggctcttcctggtccggtcattc 414983
>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0028E10 Length = 140791 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgagc 457 ||||||||||||||||||||| Sbjct: 51797 acctcgccggcgccggcgagc 51777
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 caacctcgccggcgccggcga 455 ||||||||||||||||||||| Sbjct: 21928609 caacctcgccggcgccggcga 21928629 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 20229565 cgccggcgccggcgagcgcg 20229546 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 260 ggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcattcc 319 ||||| |||||| |||||||| |||| |||| || ||| ||||||||| | | |||| Sbjct: 1574586 ggctggtgatgaggacggacacctacatcgtgccatcgctgttcctggtcaccacgttcc 1574645 Query: 320 aggacgagctcg 331 |||||||||||| Sbjct: 1574646 aggacgagctcg 1574657
>dbj|D10691.1|STMARGS S. lavendulae argG gene for argininosuccinate synthetase, complete cds Length = 2449 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 cgccggcgagcgcgtcggcat 467 ||||||||||||||||||||| Sbjct: 561 cgccggcgagcgcgtcggcat 581
>ref|XM_483563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 270 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 76 cgccggcgccggcgagcgcg 57
>ref|NM_194683.1| Oryza sativa (japonica cultivar-group) Xyloglucan fucosyltransferase-like (OSJNBa0056A20.12), mRNA Length = 948 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 260 ggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcattcc 319 ||||| |||||| |||||||| |||| |||| || ||| ||||||||| | | |||| Sbjct: 398 ggctggtgatgaggacggacacctacatcgtgccatcgctgttcctggtcaccacgttcc 457 Query: 320 aggacgagctcg 331 |||||||||||| Sbjct: 458 aggacgagctcg 469
>ref|NM_197520.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.23), mRNA Length = 1011 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 448 cgccggcgccggcgagcgcg 429
>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084H09, complete sequence Length = 130151 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aacctcgccggcgccggcga 455 |||||||||||||||||||| Sbjct: 36489 aacctcgccggcgccggcga 36470
>gb|AC079128.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0056A20, complete sequence Length = 151163 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 260 ggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcattcc 319 ||||| |||||| |||||||| |||| |||| || ||| ||||||||| | | |||| Sbjct: 93162 ggctggtgatgaggacggacacctacatcgtgccatcgctgttcctggtcaccacgttcc 93221 Query: 320 aggacgagctcg 331 |||||||||||| Sbjct: 93222 aggacgagctcg 93233
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 124925 agcctcggcaacatggtgaaaacc 124902
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 172476 agcctcggcaacatggtgaaaacc 172453
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgag 456 |||||||||||||||||||| Sbjct: 128348 acctcgccggcgccggcgag 128329
>gb|AC006970.6| Homo sapiens PAC clone RP4-725G10 from 7, complete sequence Length = 136098 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 17847 agcctcggcaacatggtgaaaacc 17870
>gb|AC073193.10| Homo sapiens BAC clone RP11-175C14 from 7, complete sequence Length = 120436 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 6274 agcctcggcaacatggtgaaaacc 6251
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 cggcgccggcgagcgcgtcggcat 467 |||||||||||||| ||||||||| Sbjct: 4058148 cggcgccggcgagctcgtcggcat 4058125 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 428 accgcaccaacctcgccggcgccg 451 ||||||||| |||||||||||||| Sbjct: 3021033 accgcaccagcctcgccggcgccg 3021010
>gb|AC010184.18| Homo sapiens 3 BAC RP11-438D8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190580 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 14199 agcctcggcaacatggtgaaaacc 14176
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.8 Identities = 59/72 (81%) Strand = Plus / Plus Query: 260 ggctgctgatgaagacggacagctacctcgtcccggggctcttcctggtcccgtcattcc 319 ||||| |||||| |||||||| |||| |||| || ||| ||||||||| | | |||| Sbjct: 1574589 ggctggtgatgaggacggacacctacatcgtgccatcgctgttcctggtcaccacgttcc 1574648 Query: 320 aggacgagctcg 331 |||||||||||| Sbjct: 1574649 aggacgagctcg 1574660
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 996280 cgccggcgccggcgagcgcg 996299
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 96024 cgccggcgccggcgagcgcg 96005
>gb|AC023729.5| Drosophila melanogaster X BAC RP98-39L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 182635 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 108209 gctgctgatgaagacggaca 108228
>gb|AC023719.4| Drosophila melanogaster X BAC RP98-4L24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187230 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 11827 gctgctgatgaagacggaca 11808
>gb|AC091601.6| Homo sapiens BAC clone RP11-653G16 from 4, complete sequence Length = 87563 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||| |||||||||||||||||| Sbjct: 16785 agcctgggcaacatgctgaaaacc 16808
>ref|NM_132301.3| Drosophila melanogaster CG7065-RA (CG7065), mRNA Length = 4044 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 2491 gctgctgatgaagacggaca 2510
>gb|AC087620.6| Homo sapiens chromosome 8, clone RP11-35G22, complete sequence Length = 154034 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 119433 agcctcggcaacatggtgaaaacc 119410
>gb|AY069601.1| Drosophila melanogaster LD35502 full length cDNA Length = 1653 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 74 gctgctgatgaagacggaca 93
>gb|AC163759.4| Pan troglodytes BAC clone CH251-258I24 from chromosome unknown, complete sequence Length = 180158 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||| |||||||||||||||||| Sbjct: 96986 agcctaggcaacatgctgaaaacc 97009
>gb|AC023356.8| Homo sapiens chromosome 15 clone RP11-329C22 map 15q15, complete sequence Length = 181891 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||| |||||||||||||||||| Sbjct: 141618 agcctaggcaacatgctgaaaacc 141595
>gb|BT023505.1| Drosophila melanogaster LD15018 full insert cDNA Length = 4229 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 2492 gctgctgatgaagacggaca 2511
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 agaagcagacgccgctacag 507 |||||||||||||||||||| Sbjct: 1617933 agaagcagacgccgctacag 1617952
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aacctcgccggcgccggcga 455 |||||||||||||||||||| Sbjct: 4064827 aacctcgccggcgccggcga 4064808
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 acctcgccggcgccggcgag 456 |||||||||||||||||||| Sbjct: 17598543 acctcgccggcgccggcgag 17598524
>emb|BX817791.1|CNS0AB09 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL41ZG06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 679 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 ggagagcacgtcgtcgtttt 577 |||||||||||||||||||| Sbjct: 400 ggagagcacgtcgtcgtttt 419
>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence Length = 178377 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 agcctcggcaacatgctgaaaacc 102 ||||||||||||||| |||||||| Sbjct: 19651 agcctcggcaacatggtgaaaacc 19674
>dbj|AP004992.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O02 Length = 176625 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 75615 cgccggcgccggcgagcgcg 75596
>dbj|AK121496.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001G17, full insert sequence Length = 2971 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 823 cgccggcgccggcgagcgcg 842
>emb|AJ276007.1|FPR276007 Festuca pratensis partial mRNA for expansin (exp2 gene) Length = 1248 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caccaacctcgccggcgccggcga 455 ||||||| |||||||||||||||| Sbjct: 592 caccaacgtcgccggcgccggcga 615
>dbj|AK106036.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D08, full insert sequence Length = 1324 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 cgccggcgccggcgagcgcg 460 |||||||||||||||||||| Sbjct: 477 cgccggcgccggcgagcgcg 458
>dbj|AK063747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-G06, full insert sequence Length = 667 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aacctcgccggcgccggcga 455 |||||||||||||||||||| Sbjct: 440 aacctcgccggcgccggcga 421
>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete sequence Length = 290970 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gctgctgatgaagacggaca 280 |||||||||||||||||||| Sbjct: 97150 gctgctgatgaagacggaca 97169
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 actaccgcaccaacctcgccggcg 448 ||||||||||||||||| |||||| Sbjct: 2529762 actaccgcaccaacctccccggcg 2529785
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 aacctcgccggcgccggcga 455 |||||||||||||||||||| Sbjct: 4073521 aacctcgccggcgccggcga 4073502
>gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chain mRNA, nuclear gene encoding mitochondrial protein, partial cds Length = 718 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 agcttccctctcggcaacctcagg 51 ||||||||||||| |||||||||| Sbjct: 206 agcttccctctcgacaacctcagg 183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,841,870 Number of Sequences: 3902068 Number of extensions: 2841870 Number of successful extensions: 69181 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 66025 Number of HSP's gapped (non-prelim): 3151 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
