ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2c14 |
|---|---|
| Clone Library Name | barley_pub |
>RAD23_ORYSA (Q40742) Putative DNA repair protein RAD23 (OsRAD23)| Length = 392 Score = 320 bits (819), Expect = 3e-87 Identities = 168/215 (78%), Positives = 178/215 (82%), Gaps = 3/215 (1%) Frame = +2 Query: 11 NLWXAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEP 190 N A SNLVAG LEATIQSILEMGGG WDRDIVL AL AAFNNPERAVEYLYSG+PE Sbjct: 144 NYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQ 203 Query: 191 MEIXXXXXXXXXXXXXXXXLATQPA---VASSGPNASPLDLFPQALPNASTNAAGEGNLD 361 M+I ATQPA + SSGPNASPLDLFPQALPNAST+AAG GNLD Sbjct: 204 MDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAGLGNLD 263 Query: 362 VLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDED 541 LRNNAQFR+LLSLVQANPQILQPLLQELGKQNPQILQLIQ+NQAEFL LINEPAEGD++ Sbjct: 264 ALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDE 323 Query: 542 ENLLEQFAEGVPQTIAVTPEENEAILRLEGMGFDR 646 ENLL+QF E +PQTIAVTPEENEAILRLE MGFDR Sbjct: 324 ENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDR 358
>RD23D_ARATH (Q84L30) Putative DNA repair protein RAD23-4 (RAD23-like protein 4)| (AtRAD23-4) Length = 378 Score = 258 bits (659), Expect = 1e-68 Identities = 135/213 (63%), Positives = 161/213 (75%), Gaps = 5/213 (2%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AASNLVAG TLE+T+Q IL+MGGG+WDRD V+RALRAAFNNPERAVEYLYSGIP EI Sbjct: 138 AASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPAQAEIP 197 Query: 203 XXXXXXXXXXXXXXXLA-----TQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVL 367 LA PA A+ GPNA+PL+LFPQ +P A A G GNLD L Sbjct: 198 PVAQAPATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQGMPAADAGA-GAGNLDFL 256 Query: 368 RNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDEN 547 RN+ QF++L ++VQANPQILQP+LQELGKQNPQ+++LIQ++QA+FLRLINEP EG +EN Sbjct: 257 RNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLINEPVEG--EEN 314 Query: 548 LLEQFAEGVPQTIAVTPEENEAILRLEGMGFDR 646 ++EQ +PQ + VTPEE EAI RLEGMGFDR Sbjct: 315 VMEQLEAAMPQAVTVTPEEREAIERLEGMGFDR 347
>RD23C_ARATH (Q84L31) Putative DNA repair protein RAD23-3 (RAD23-like protein 3)| (AtRAD23-3) Length = 419 Score = 241 bits (614), Expect = 2e-63 Identities = 134/214 (62%), Positives = 156/214 (72%), Gaps = 6/214 (2%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AASNL AG LE+TIQ IL+MGGGTWDR+ V+ ALRAAFNNPERAVEYLY+GIPE E+ Sbjct: 177 AASNLAAGSNLESTIQQILDMGGGTWDRETVVLALRAAFNNPERAVEYLYTGIPEQAEVP 236 Query: 203 XXXXXXXXXXXXXXXLAT--QPAVA-SSGPNASPLDLFPQALPNASTNAAGEGNLDVLRN 373 A QPA A +SGPNA+PLDLFPQ LPN N G G LD LRN Sbjct: 237 PVARPPASAGQPANPPAQTQQPAAAPASGPNANPLDLFPQGLPNVGGNP-GAGTLDFLRN 295 Query: 374 NAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE-GDEDENL 550 + QF++L ++VQANPQ+LQP+LQELGKQNP +++LIQD+QA+FLRLINEP E G E NL Sbjct: 296 SQQFQALRAMVQANPQVLQPMLQELGKQNPNLMRLIQDHQADFLRLINEPVEGGGESGNL 355 Query: 551 LEQFAEGV--PQTIAVTPEENEAILRLEGMGFDR 646 L Q A G+ PQ I VT EE EAI RLE MGF+R Sbjct: 356 LGQMAAGMPQPQAIQVTHEEREAIERLEAMGFER 389
>RD23A_ARATH (Q84L33) Putative DNA repair protein RAD23-1 (RAD23-like protein 1)| (AtRAD23-1) Length = 371 Score = 221 bits (563), Expect = 1e-57 Identities = 117/209 (55%), Positives = 148/209 (70%), Gaps = 1/209 (0%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AAS LV+G +LE +Q I+EMGGG+WD++ V RALRAA+NNPERAV+YLYSGIP+ E+ Sbjct: 138 AASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVA 197 Query: 203 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 382 A A AS GPN+SPLDLFPQ A+ + G L+ LRNN Q Sbjct: 198 VPVPEAQIAGSG----AAPVAPASGGPNSSPLDLFPQETV-AAAGSGDLGTLEFLRNNDQ 252 Query: 383 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDE-NLLEQ 559 F+ L ++V +NPQILQP+LQELGKQNPQ+L+LIQ+NQAEFL+L+NEP EG + E ++ +Q Sbjct: 253 FQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQ 312 Query: 560 FAEGVPQTIAVTPEENEAILRLEGMGFDR 646 + +P I VTP E EAI RLE MGFDR Sbjct: 313 PEQEMPHAINVTPAEQEAIQRLEAMGFDR 341
>RD23B_ARATH (Q84L32) Putative DNA repair protein RAD23-2 (RAD23-like protein 2)| (AtRAD23-2) Length = 368 Score = 218 bits (554), Expect = 2e-56 Identities = 119/211 (56%), Positives = 151/211 (71%), Gaps = 3/211 (1%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AAS LV+G ++E +Q I+EMGGG+WD++ V RALRAA+NNPERAV+YLYSGIPE + I Sbjct: 136 AASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETVTIP 195 Query: 203 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGE--GNLDVLRNN 376 L P S GPN+SPLDLFPQ A ++AAG G L+ LR N Sbjct: 196 ATNLSGVGSGRE---LTAPPP--SGGPNSSPLDLFPQ---EAVSDAAGGDLGTLEFLRGN 247 Query: 377 AQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEG-DEDENLL 553 QF+ L S+V +NPQILQP+LQELGKQNPQ+L+LIQ+NQAEFL+L+NEP EG D D ++ Sbjct: 248 DQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLLNEPYEGSDGDVDIF 307 Query: 554 EQFAEGVPQTIAVTPEENEAILRLEGMGFDR 646 +Q + +P ++ VTPEE E+I RLE MGFDR Sbjct: 308 DQPDQEMPHSVNVTPEEQESIERLEAMGFDR 338
>RD23B_HUMAN (P54727) UV excision repair protein RAD23 homolog B (hHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 409 Score = 124 bits (311), Expect = 2e-28 Identities = 79/223 (35%), Positives = 113/223 (50%), Gaps = 10/223 (4%) Frame = +2 Query: 2 RSRNLWXAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGI 181 RS A S LV G + E + I+ MG ++R+ V+ ALRA+FNNP+RAVEYL GI Sbjct: 173 RSNLFEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGI 229 Query: 182 PEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGN-- 355 P E + P AS+G S A A+T G Sbjct: 230 PGDRE--------------SQAVVDPPQAASTGAPQSSAVAAAAATTTATTTTTSSGGHP 275 Query: 356 LDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE-- 529 L+ LRN QF+ + ++Q NP +L LLQ++G++NPQ+LQ I +Q F++++NEP + Sbjct: 276 LEFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEA 335 Query: 530 ------GDEDENLLEQFAEGVPQTIAVTPEENEAILRLEGMGF 640 G + + G I VTP+E EAI RL+ +GF Sbjct: 336 GGQGGGGGGGSGGIAEAGSGHMNYIQVTPQEKEAIERLKALGF 378
>RD23B_MOUSE (P54728) UV excision repair protein RAD23 homolog B (mHR23B) (XP-C| repair-complementing complex 58 kDa protein) (p58) Length = 416 Score = 121 bits (304), Expect = 2e-27 Identities = 79/229 (34%), Positives = 114/229 (49%), Gaps = 16/229 (6%) Frame = +2 Query: 2 RSRNLWXAASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGI 181 RS A S LV G + E + I+ MG ++R+ V+ ALRA+FNNP+RAVEYL GI Sbjct: 173 RSNLFEDATSALVTGQSYENMVTEIMSMG---YEREQVIAALRASFNNPDRAVEYLLMGI 229 Query: 182 PEPMEIXXXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGN-L 358 P E + P S+G SP A A+T G+ L Sbjct: 230 PGDRE-------------SQAVVDPPPQAVSTGTPQSPAVAAAAATTTATTTTTSGGHPL 276 Query: 359 DVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAE--- 529 + LRN QF+ + ++Q NP +L LLQ++G++NPQ+LQ I +Q F++++NEP + Sbjct: 277 EFLRNQPQFQQMRQIIQQNPSLLPALLQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAG 336 Query: 530 ------------GDEDENLLEQFAEGVPQTIAVTPEENEAILRLEGMGF 640 G + + G I VTP+E EAI RL+ +GF Sbjct: 337 GQGGGGGGGGGGGGGGGGGIAEAGSGHMNYIQVTPQEKEAIERLKALGF 385
>RD23A_MOUSE (P54726) UV excision repair protein RAD23 homolog A (mHR23A)| Length = 363 Score = 120 bits (302), Expect = 3e-27 Identities = 80/212 (37%), Positives = 113/212 (53%), Gaps = 6/212 (2%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AAS LV G E + I+ MG ++R+ V+ ALRA++NNP RAVEYL +GIP E Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPE-- 207 Query: 203 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 382 A QPA T AAGE L+ LR+ Q Sbjct: 208 -----PEHGSVQESQRAEQPA----------------------TEAAGENPLEFLRDQPQ 240 Query: 383 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEP----AEGDEDENL 550 F+++ ++Q NP +L LLQ+LG++NPQ+LQ I +Q +F++++NEP A+ + E Sbjct: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300 Query: 551 LEQFAEGVPQT--IAVTPEENEAILRLEGMGF 640 + E PQ I VTP+E EAI RL+ +GF Sbjct: 301 VGAIGEEAPQMNYIQVTPQEKEAIERLKALGF 332
>RD23A_HUMAN (P54725) UV excision repair protein RAD23 homolog A (hHR23A)| Length = 363 Score = 120 bits (302), Expect = 3e-27 Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 6/212 (2%) Frame = +2 Query: 23 AASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIX 202 AAS LV G E + I+ MG ++R+ V+ ALRA++NNP RAVEYL +GIP E Sbjct: 153 AASTLVTGSEYETMLTEIMSMG---YERERVVAALRASYNNPHRAVEYLLTGIPGSPEPE 209 Query: 203 XXXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQ 382 + Q + S P +T AAGE L+ LR+ Q Sbjct: 210 HG--------------SVQESQVSEQP---------------ATEAAGENPLEFLRDQPQ 240 Query: 383 FRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEP----AEGDEDENL 550 F+++ ++Q NP +L LLQ+LG++NPQ+LQ I +Q +F++++NEP A+ + E Sbjct: 241 FQNMRQVIQQNPALLPALLQQLGQENPQLLQQISRHQEQFIQMLNEPPGELADISDVEGE 300 Query: 551 LEQFAEGVPQT--IAVTPEENEAILRLEGMGF 640 + E PQ I VTP+E EAI RL+ +GF Sbjct: 301 VGAIGEEAPQMNYIQVTPQEKEAIERLKALGF 332
>RHP23_SCHPO (O74803) UV excision repair protein rhp23 (RAD23 homolog)| Length = 368 Score = 112 bits (279), Expect = 1e-24 Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 6/213 (2%) Frame = +2 Query: 26 ASNLVAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIXX 205 A+ L G +++++EMG ++R V RA+RAAFNNP+RAVEYL +GIPE + + Sbjct: 138 ANTLAVGAQRNVAVENMVEMG---YERSEVERAMRAAFNNPDRAVEYLLTGIPEDI-LNR 193 Query: 206 XXXXXXXXXXXXXXLATQPAVASSGPNASPLDLFPQALPNAS------TNAAGEGNLDVL 367 + A S+G P +LF QA + + +N G+ L L Sbjct: 194 QREESAAALAAQQQQSEALAPTSTG---QPANLFEQAALSENENQEQPSNTVGDDPLGFL 250 Query: 368 RNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDEN 547 R+ QF+ L +VQ NPQ+L+ +LQ++G+ +P + Q I N FL+L+ AEG E E+ Sbjct: 251 RSIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAITQNPEAFLQLL---AEGAEGES 307 Query: 548 LLEQFAEGVPQTIAVTPEENEAILRLEGMGFDR 646 L + G+ I +T EE+E+I RL +GFDR Sbjct: 308 ALP--SGGI--QIQITQEESESIDRLCQLGFDR 336
>RAD23_YEAST (P32628) UV excision repair protein RAD23| Length = 398 Score = 88.6 bits (218), Expect = 1e-17 Identities = 77/239 (32%), Positives = 110/239 (46%), Gaps = 36/239 (15%) Frame = +2 Query: 38 VAGGTLEATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPEPMEIXXXXXX 217 V G TI+ I+EMG + R+ V RALRAAFNNP+RAVEYL GIPE + Sbjct: 143 VVGTERNETIERIMEMG---YQREEVERALRAAFNNPDRAVEYLLMGIPENLR------- 192 Query: 218 XXXXXXXXXXLATQPA-VASSGPNASPLDLFPQALP--NASTNAAGE--GNLDVLRNN-- 376 A QP+ A++ + DLF QA NAS+ A G G D + Sbjct: 193 QPEPQQQTAAAAEQPSTAATTAEQPAEDDLFAQAAQGGNASSGALGTTGGATDAAQGGPP 252 Query: 377 -------AQFRSLLSLVQANPQILQPLLQELGKQNPQ---------------ILQLIQDN 490 SL +V NP+ L PLL+ + + PQ +L+ + DN Sbjct: 253 GSIGLTVEDLLSLRQVVSGNPEALAPLLENISARYPQLREHIMANPEVFVSMLLEAVGDN 312 Query: 491 QAEFLRLINEPAEGDEDENLLEQFAEGVPQ-------TIAVTPEENEAILRLEGMGFDR 646 + + ++ EG++ E E A G+ Q + TPE+++AI RL +GF+R Sbjct: 313 MQDVMEGADDMVEGEDIEVTGEAAAAGLGQGEGEGSFQVDYTPEDDQAISRLCELGFER 371
>FOXP4_HUMAN (Q8IVH2) Forkhead box protein P4 (Fork head-related protein-like A)| Length = 680 Score = 33.5 bits (75), Expect = 0.56 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%) Frame = +2 Query: 296 LDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQ 475 L + Q L ++ + GN D ++ + + +S+ +PQ+L P + PQ+ Sbjct: 70 LQVARQFLLQQASGLSSPGNNDSKQSASAVQVPVSVAMMSPQMLTPQQMQQILSPPQLQA 129 Query: 476 LIQDNQAEFLRLINEPAEGDEDE---NLLEQFAEGVPQ 580 L+Q QA L+ + E + +++ LL Q G PQ Sbjct: 130 LLQQQQALMLQQLQEYYKKQQEQLHLQLLTQQQAGKPQ 167
>UBP5_MOUSE (P56399) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T) Length = 858 Score = 33.1 bits (74), Expect = 0.73 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = +2 Query: 56 EATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPE 187 E + +I+ MG + RD L+ALRA N+ ERAV++++S I + Sbjct: 725 EDCVTTIVSMG---FSRDQALKALRATNNSLERAVDWIFSHIDD 765
>UBP5_HUMAN (P45974) Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)| (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5) (Deubiquitinating enzyme 5) (Isopeptidase T) Length = 858 Score = 33.1 bits (74), Expect = 0.73 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = +2 Query: 56 EATIQSILEMGGGTWDRDIVLRALRAAFNNPERAVEYLYSGIPE 187 E + +I+ MG + RD L+ALRA N+ ERAV++++S I + Sbjct: 725 EDCVTTIVSMG---FSRDQALKALRATNNSLERAVDWIFSHIDD 765
>PFLA_HAEIN (P43751) Pyruvate formate-lyase 1-activating enzyme (EC 1.97.1.4)| (PFL-activating enzyme) (Formate-C-acetyltransferase-activating enzyme 1) Length = 245 Score = 32.7 bits (73), Expect = 0.95 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Frame = +2 Query: 392 LLSLVQANPQILQPLLQELGKQNPQILQLIQD-NQAEFLRLINEPA--EGDEDENLLEQF 562 LL L + N Q+ Q L+ K+ + + +Q NQ ++R + P + D D +LL QF Sbjct: 127 LLDLKELNDQVHQNLIGVPNKRTLEFAKYLQKRNQHTWIRYVVVPGYTDSDHDVHLLGQF 186 Query: 563 AEGVP--QTIAVTPEENEAILRLEGMGFD 643 EG+ + + + P + + + +G D Sbjct: 187 IEGMTNIEKVELLPYHRLGVHKWKTLGLD 215
>UBC2_DEBHA (Q6BU36) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase UBC2) (Ubiquitin carrier protein UBC2) Length = 168 Score = 31.2 bits (69), Expect = 2.8 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 12/101 (11%) Frame = +2 Query: 281 PNASPLDLFPQALPNASTNAAGEGNLDVLRN----NAQFRSLLSLVQA---NPQILQPLL 439 PN P F + + + A+GE LD+L+N S+L+ +Q+ +P I P Sbjct: 64 PNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSP-- 121 Query: 440 QELGKQNPQILQLIQDNQAEFLRLINEPAEG-----DEDEN 547 N + L +D+++++++ + E E DEDE+ Sbjct: 122 -----ANVEAANLYKDHRSQYIKRVRETVENSWNEDDEDED 157
>BIOF_HAEIN (P44422) 8-amino-7-oxononanoate synthase (EC 2.3.1.47) (AONS)| (8-amino-7-ketopelargonate synthase) (7-keto-8-amino-pelargonic acid synthetase) (7-KAP synthetase) (L-alanine--pimelyl CoA ligase) Length = 380 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%) Frame = +3 Query: 27 LQTLLREAP*RQQFSQFLKWAVEHGTEIL----CFVPYVL 134 L L +E +Q S FL+ VEH T+I+ C VPY+L Sbjct: 286 LPQLSKERTHLEQLSAFLRQEVEHRTQIMPSQTCIVPYIL 325
>NOG2_HUMAN (Q13823) Nucleolar GTP-binding protein 2 (Autoantigen NGP-1)| Length = 731 Score = 31.2 bits (69), Expect = 2.8 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 19/128 (14%) Frame = +2 Query: 281 PNASPLDLFPQALPNAS----------------TNAAGEGNLDVLRNNAQFRSLLSLVQA 412 PNA PL + PQ LP++S T AGEG+ +++ + S Sbjct: 463 PNAEPL-VAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTE 521 Query: 413 NPQILQPLLQELGKQNPQILQLIQDN--QAEFLRLINE-PAEGDEDENLLEQFAEGVPQT 583 QIL + Q GK N + Q D+ E L E + DE+E EQ + ++ Sbjct: 522 MQQILTRVRQNFGKIN-VVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEES 580 Query: 584 IAVTPEEN 607 + EEN Sbjct: 581 SSEPEEEN 588
>BCHH_CHLVI (O50314) Magnesium-chelatase subunit H (EC 6.6.1.1)| (Mg-protoporphyrin IX chelatase subunit H) Length = 1279 Score = 30.8 bits (68), Expect = 3.6 Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Frame = +2 Query: 371 NNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENL 550 N +R + S++ + +++Q +L KQNP+ I++ F+ +IN + D + Sbjct: 24 NAGLWRKIKSMLDKDAELVQLSDVDLEKQNPEAATAIREADCVFMSMINFKEQIDWFKEQ 83 Query: 551 LEQ--------FAEGVPQTIAVT 595 L+Q E +P+ +A+T Sbjct: 84 LDQAINEKTIFIFESMPEAMALT 106
>YOPM_YERPE (P17778) Outer membrane protein yopM| Length = 409 Score = 30.8 bits (68), Expect = 3.6 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 7/122 (5%) Frame = +2 Query: 296 LDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQI-----LQPLLQELGKQN 460 L P+ P+ + A +L L Q SL SL+ N + L PLL+ LG N Sbjct: 83 LSSLPELPPHLESLVASCNSLTELPELPQ--SLKSLLVDNNNLKALSDLPPLLEYLGVSN 140 Query: 461 PQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGVP--QTIAVTPEENEAILRLEGM 634 Q+ +L + + FL++I D D N L++ + P + IA + E + L+ + Sbjct: 141 NQLEKLPELQNSSFLKII------DVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNL 194 Query: 635 GF 640 F Sbjct: 195 PF 196
>MDR12_ARATH (Q9C7F2) Multidrug resistance protein 12 (P-glycoprotein 14)| Length = 1247 Score = 30.8 bits (68), Expect = 3.6 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +2 Query: 287 ASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQE----LGK 454 A+ D F ++LPN GEG + Q ++ V NP+IL LL E L Sbjct: 486 AANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL--LLDEATSALDA 543 Query: 455 QNPQILQLIQDNQAE 499 ++ +I+Q DN E Sbjct: 544 ESEKIVQQALDNVME 558
>MDR15_ARATH (Q9C7F8) Putative multidrug resistance protein 15 (P-glycoprotein| 13) Length = 1245 Score = 30.8 bits (68), Expect = 3.6 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +2 Query: 287 ASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQE----LGK 454 A+ D F ++LPN GEG + Q ++ V NP+IL LL E L Sbjct: 485 AANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKIL--LLDEATSALDA 542 Query: 455 QNPQILQLIQDNQAE 499 ++ +I+Q DN E Sbjct: 543 ESEKIVQQALDNVME 557
>ARCA_STAEQ (Q5HKU2) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine| dihydrolase) (AD) Length = 411 Score = 30.4 bits (67), Expect = 4.7 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 Query: 431 PLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGV 574 P L+ +++ Q++QD E L L A+ ED N+ EQF + V Sbjct: 44 PFLKVAQQEHDHFAQVLQDEGIEVLYLEKLAAQSIEDSNVREQFIDDV 91
>ARCA2_STAES (Q8CMW1) Arginine deiminase 2 (EC 3.5.3.6) (ADI 2) (Arginine| dihydrolase 2) (AD 2) Length = 411 Score = 30.4 bits (67), Expect = 4.7 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +2 Query: 431 PLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGV 574 P L+ +++ Q++QD E L L A+ ED N+ EQF + V Sbjct: 44 PFLKVAQQEHDHFAQVLQDEGIEVLYLEKLAAQSIEDSNVREQFIDDV 91
>UBC2_SCHPO (P23566) Ubiquitin-conjugating enzyme E2 2 (EC 6.3.2.19)| (Ubiquitin-protein ligase ubc2) (Ubiquitin carrier protein ubc2) (RAD6 homolog) Length = 151 Score = 30.4 bits (67), Expect = 4.7 Identities = 21/83 (25%), Positives = 38/83 (45%) Frame = +2 Query: 281 PNASPLDLFPQALPNASTNAAGEGNLDVLRNNAQFRSLLSLVQANPQILQPLLQELGKQN 460 PN PL F + + + A GE LD+L+N ++ + + Q L N Sbjct: 64 PNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPAN 123 Query: 461 PQILQLIQDNQAEFLRLINEPAE 529 + QL ++N+ E++R + + E Sbjct: 124 AEAAQLHRENKKEYVRRVRKTVE 146
>GOGA2_HUMAN (Q08379) Golgin subfamily A member 2 (Cis-Golgi matrix protein| GM130) (Gm130 autoantigen) (Golgin-95) Length = 990 Score = 30.0 bits (66), Expect = 6.2 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 7/89 (7%) Frame = +2 Query: 368 RNNAQFRSLLSLVQANPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGD---- 535 + AQ +++ + + Q Q L+ +QN Q+ +A+ L L+ P EGD Sbjct: 640 QQEAQGKAVAEMARQELQETQERLEAATQQNQQL-------RAQ-LSLMAHPGEGDGLDR 691 Query: 536 ---EDENLLEQFAEGVPQTIAVTPEENEA 613 EDE E+ A VPQ + PE+ E+ Sbjct: 692 EEEEDEEEEEEEAVAVPQPMPSIPEDLES 720
>MAON_MOUSE (Q8BMF3) NADP-dependent malic enzyme, mitochondrial precursor (EC| 1.1.1.40) (NADP-ME) (Malic enzyme 3) Length = 604 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/60 (25%), Positives = 32/60 (53%) Frame = +2 Query: 413 NPQILQPLLQELGKQNPQILQLIQDNQAEFLRLINEPAEGDEDENLLEQFAEGVPQTIAV 592 NPQ P+L ++G N ++L+ ++ L ++ G+E ++LL++F + V + Sbjct: 219 NPQQCLPVLLDVGTNNEELLR-----DPLYIGLKHQRVRGEEYDDLLDEFMQAVTDKFGI 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,056,537 Number of Sequences: 219361 Number of extensions: 1608452 Number of successful extensions: 5205 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 5033 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5177 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
