ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal1n11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_477727.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5802 Score = 198 bits (100), Expect = 2e-47 Identities = 328/404 (81%) Strand = Plus / Plus Query: 187 gacaaaggaaaacttgaggatgctgttaactacggcacaaaggctcttgcaaaactggtt 246 ||||| ||||||||||| |||||||| || || || || ||||||||||| ||||| | Sbjct: 2800 gacaagggaaaacttgaagatgctgtcaattatgggaccaaggctcttgctaaactcata 2859 Query: 247 gctgtttgtggtccgtatcatagaatgaccgcaggagcatacagcctcttggcagtagtg 306 | ||||||||||| |||||| ||||||| || ||||| || || || | || || || Sbjct: 2860 acagtttgtggtccctatcatcgaatgacagctggagcttatagtctgctagctgttgta 2919 Query: 307 ctttatcatactggggacttcaaccaggcaactatctatcaacagaaggctttagatatt 366 | ||||| ||||| || || || ||||| || |||||||| || ||||| |||| || Sbjct: 2920 ttgtatcacactggtgattttaatcaggctacgatctatcagcaaaaggccctagacatc 2979 Query: 367 aacgagagggaacttggacttgatcacccagatactatgaaaagctatggagatcttgct 426 || |||||||||||||| || |||||||| ||||| ||||| || ||||||||||||||| Sbjct: 2980 aatgagagggaacttgggctagatcaccctgatacaatgaagagttatggagatcttgct 3039 Query: 427 gttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgtgcccta 486 || |||||||| || | |||||||||||| |||| |||||||||||||| ||||| ||| Sbjct: 3040 gtgttctactaccgtttacaacatacagaactggctctaaagtatgtcaagcgtgcacta 3099 Query: 487 tatcttttgcacctgacatgtggcccatctcaccctaatactgctgcaacttacatcaat 546 ||||| |||| || ||||| || |||||||| || || || ||||| || || ||||| Sbjct: 3100 tatctactgcatcttacatgcgggccatctcatccaaacacagctgcgacatatatcaac 3159 Query: 547 gttgctatgatggaagaagggttgggtaacgtccatgtagcact 590 || ||||||||||| ||||| |||||||| || ||||||||||| Sbjct: 3160 gtagctatgatggaggaaggcttgggtaatgtgcatgtagcact 3203
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Minus Query: 329 accaggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttg 388 |||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 8813140 accaggcaacaatctatcaacagaaggctttagatataaatgagagagaacttggactag 8813081 Query: 389 atcacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaac 448 |||| |||||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 8813080 atcatccagatacaatgaaaagctatggagatcttgcagttttctattaccgcctgcagc 8813021 Query: 449 atacagaattggcactaaagtatgt 473 |||||||||||||| |||||||||| Sbjct: 8813020 atacagaattggcattaaagtatgt 8812996 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 |||||| || |||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 8812864 gtatgtgaatcgtgccctatatcttttgcacctgacatgtggaccctctcatcctaatac 8812805 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 |||||||||||| || ||||| || ||||||||||||||| ||||||| || ||||| || Sbjct: 8812804 tgctgcaacttatattaatgtggcaatgatggaagaagggctgggtaatgttcatgttgc 8812745 Query: 588 actccgttacctgcatgaggcgctaaaat 616 ||| |||||||| |||||||| ||||||| Sbjct: 8812744 acttcgttaccttcatgaggctctaaaat 8812716 Score = 167 bits (84), Expect = 5e-38 Identities = 102/108 (94%) Strand = Plus / Minus Query: 227 aggctcttgcaaaactggttgctgtttgtggtccgtatcatagaatgaccgcaggagcat 286 |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 8813658 aggctcttgcaaaacttgttgctgtttgtggtccttatcacagaatgacagcaggagcat 8813599 Query: 287 acagcctcttggcagtagtgctttatcatactggggacttcaaccagg 334 ||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 8813598 acagccttttggcagtagtgctttatcatactggtgacttcaaccagg 8813551 Score = 155 bits (78), Expect = 2e-34 Identities = 100/106 (94%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 124 agcatgttgcatgctcatcagcagnatggtcgcaccctgttggagtcatccaagactttc 183 |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 8813841 agcatgttgcatgctcatcagcag-acggtcgaaccctgttggagtcatccaagactttc 8813783 Query: 184 ctggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 8813782 ctggacaagggaaagcttgaggatgctgttaactatggcacaaagg 8813737 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/91 (85%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 35 acttgagctagttaccaaagcactacgacatggnatacaccacatgcattcagtaaagtc 94 |||||||||||||||||||| | || ||||||| ||| |||||| ||||||| || ||| Sbjct: 8814017 acttgagctagttaccaaag-attatgacatgg-atatgccacatccattcag-aaggtc 8813961 Query: 95 tgatatcatcagtattgttcccatctacaag 125 ||||| ||||| |||||||| ||||||||| Sbjct: 8813960 agatataatcagcattgttcctatctacaag 8813930
>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0613F08 Length = 142937 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Minus Query: 329 accaggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttg 388 |||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 18158 accaggcaacaatctatcaacagaaggctttagatataaatgagagagaacttggactag 18099 Query: 389 atcacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaac 448 |||| |||||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 18098 atcatccagatacaatgaaaagctatggagatcttgcagttttctattaccgcctgcagc 18039 Query: 449 atacagaattggcactaaagtatgt 473 |||||||||||||| |||||||||| Sbjct: 18038 atacagaattggcattaaagtatgt 18014 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 |||||| || |||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 17882 gtatgtgaatcgtgccctatatcttttgcacctgacatgtggaccctctcatcctaatac 17823 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 |||||||||||| || ||||| || ||||||||||||||| ||||||| || ||||| || Sbjct: 17822 tgctgcaacttatattaatgtggcaatgatggaagaagggctgggtaatgttcatgttgc 17763 Query: 588 actccgttacctgcatgaggcgctaaaat 616 ||| |||||||| |||||||| ||||||| Sbjct: 17762 acttcgttaccttcatgaggctctaaaat 17734 Score = 167 bits (84), Expect = 5e-38 Identities = 102/108 (94%) Strand = Plus / Minus Query: 227 aggctcttgcaaaactggttgctgtttgtggtccgtatcatagaatgaccgcaggagcat 286 |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 18676 aggctcttgcaaaacttgttgctgtttgtggtccttatcacagaatgacagcaggagcat 18617 Query: 287 acagcctcttggcagtagtgctttatcatactggggacttcaaccagg 334 ||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 18616 acagccttttggcagtagtgctttatcatactggtgacttcaaccagg 18569 Score = 155 bits (78), Expect = 2e-34 Identities = 100/106 (94%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 124 agcatgttgcatgctcatcagcagnatggtcgcaccctgttggagtcatccaagactttc 183 |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 18859 agcatgttgcatgctcatcagcag-acggtcgaaccctgttggagtcatccaagactttc 18801 Query: 184 ctggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 18800 ctggacaagggaaagcttgaggatgctgttaactatggcacaaagg 18755 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/91 (85%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 35 acttgagctagttaccaaagcactacgacatggnatacaccacatgcattcagtaaagtc 94 |||||||||||||||||||| | || ||||||| ||| |||||| ||||||| || ||| Sbjct: 19035 acttgagctagttaccaaag-attatgacatgg-atatgccacatccattcag-aaggtc 18979 Query: 95 tgatatcatcagtattgttcccatctacaag 125 ||||| ||||| |||||||| ||||||||| Sbjct: 18978 agatataatcagcattgttcctatctacaag 18948
>dbj|AP006844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0052K15 Length = 156250 Score = 192 bits (97), Expect = 9e-46 Identities = 133/145 (91%) Strand = Plus / Minus Query: 329 accaggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttg 388 |||||||||| |||||||||||||||||||||||||| || ||||| ||||||||||| | Sbjct: 112219 accaggcaacaatctatcaacagaaggctttagatataaatgagagagaacttggactag 112160 Query: 389 atcacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaac 448 |||| |||||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 112159 atcatccagatacaatgaaaagctatggagatcttgcagttttctattaccgcctgcagc 112100 Query: 449 atacagaattggcactaaagtatgt 473 |||||||||||||| |||||||||| Sbjct: 112099 atacagaattggcattaaagtatgt 112075 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 |||||| || |||||||||||||||||||||||||||||||| || ||||| |||||||| Sbjct: 111943 gtatgtgaatcgtgccctatatcttttgcacctgacatgtggaccctctcatcctaatac 111884 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 |||||||||||| || ||||| || ||||||||||||||| ||||||| || ||||| || Sbjct: 111883 tgctgcaacttatattaatgtggcaatgatggaagaagggctgggtaatgttcatgttgc 111824 Query: 588 actccgttacctgcatgaggcgctaaaat 616 ||| |||||||| |||||||| ||||||| Sbjct: 111823 acttcgttaccttcatgaggctctaaaat 111795 Score = 167 bits (84), Expect = 5e-38 Identities = 102/108 (94%) Strand = Plus / Minus Query: 227 aggctcttgcaaaactggttgctgtttgtggtccgtatcatagaatgaccgcaggagcat 286 |||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||| Sbjct: 112737 aggctcttgcaaaacttgttgctgtttgtggtccttatcacagaatgacagcaggagcat 112678 Query: 287 acagcctcttggcagtagtgctttatcatactggggacttcaaccagg 334 ||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct: 112677 acagccttttggcagtagtgctttatcatactggtgacttcaaccagg 112630 Score = 155 bits (78), Expect = 2e-34 Identities = 100/106 (94%), Gaps = 1/106 (0%) Strand = Plus / Minus Query: 124 agcatgttgcatgctcatcagcagnatggtcgcaccctgttggagtcatccaagactttc 183 |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||| Sbjct: 112920 agcatgttgcatgctcatcagcag-acggtcgaaccctgttggagtcatccaagactttc 112862 Query: 184 ctggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 112861 ctggacaagggaaagcttgaggatgctgttaactatggcacaaagg 112816 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/91 (85%), Gaps = 3/91 (3%) Strand = Plus / Minus Query: 35 acttgagctagttaccaaagcactacgacatggnatacaccacatgcattcagtaaagtc 94 |||||||||||||||||||| | || ||||||| ||| |||||| ||||||| || ||| Sbjct: 113096 acttgagctagttaccaaag-attatgacatgg-atatgccacatccattcag-aaggtc 113040 Query: 95 tgatatcatcagtattgttcccatctacaag 125 ||||| ||||| |||||||| ||||||||| Sbjct: 113039 agatataatcagcattgttcctatctacaag 113009
>ref|NM_100014.3| Arabidopsis thaliana unknown protein AT1G01320 mRNA, complete cds Length = 5756 Score = 190 bits (96), Expect = 4e-45 Identities = 309/380 (81%) Strand = Plus / Plus Query: 187 gacaaaggaaaacttgaggatgctgttaactacggcacaaaggctcttgcaaaactggtt 246 ||||||||||| ||||| ||||| |||| || || || ||||||||||| ||||| || Sbjct: 2674 gacaaaggaaagcttgaagatgcagttacatatggaacgaaggctcttgctaaactcgta 2733 Query: 247 gctgtttgtggtccgtatcatagaatgaccgcaggagcatacagcctcttggcagtagtg 306 || ||||| ||||| ||||| |||||||| || ||||| ||||| | | || || || Sbjct: 2734 gcagtttgcggtccctatcacagaatgacagccggagcttacagtttacttgctgtggtt 2793 Query: 307 ctttatcatactggggacttcaaccaggcaactatctatcaacagaaggctttagatatt 366 || ||||| ||||| ||||| |||||||| || || ||||| || ||||||||||| || Sbjct: 2794 ctatatcacactggtgactttaaccaggctacaatatatcagcaaaaggctttagacatc 2853 Query: 367 aacgagagggaacttggacttgatcacccagatactatgaaaagctatggagatcttgct 426 || ||||||||||||||||||||||| |||||||| ||||| || ||||| ||||||||| Sbjct: 2854 aatgagagggaacttggacttgatcatccagatacaatgaagagttatggtgatcttgct 2913 Query: 427 gttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgtgcccta 486 || ||||| ||| | || || |||||||| |||| || |||||||| || ||||| | Sbjct: 2914 gtcttctattataggcttcagcatacagagctggctctcaagtatgttaagcgtgcgttg 2973 Query: 487 tatcttttgcacctgacatgtggcccatctcaccctaatactgctgcaacttacatcaat 546 ||||| || || || ||||| || |||||||| || ||||||||||| || ||||||||| Sbjct: 2974 tatctcttacatctcacatgcggtccatctcatccaaatactgctgctacatacatcaat 3033 Query: 547 gttgctatgatggaagaagg 566 || || |||||||| ||||| Sbjct: 3034 gtagccatgatggaggaagg 3053
>ref|NM_118947.2| Arabidopsis thaliana unknown protein AT4G28080 mRNA, complete cds Length = 5813 Score = 176 bits (89), Expect = 6e-41 Identities = 381/477 (79%), Gaps = 1/477 (0%) Strand = Plus / Plus Query: 90 aagtctgatatcatcagtattgttcccatctacaagcatgttgcatgctcatcagcagna 149 |||| |||||| |||||||| ||||| | || ||||| || ||||| ||||| |||| | Sbjct: 2577 aagtttgatattatcagtatggttcctgtgtataagcacgtagcatgttcatccgcag-a 2635 Query: 150 tggtcgcaccctgttggagtcatccaagactttcctggacaaaggaaaacttgaggatgc 209 ||| ||||| ||||||| |||||||| || | | | || ||||| ||||| |||||||| Sbjct: 2636 tgggcgcactttgttggaatcatccaaaacctccttagataaaggcaaactggaggatgc 2695 Query: 210 tgttaactacggcacaaaggctcttgcaaaactggttgctgtttgtggtccgtatcatag 269 ||| || || ||||| ||||| | || || || || ||||| || || || |||||||| Sbjct: 2696 tgtcaattatggcaccaaggcattggccaagcttgtagctgtgtgcggcccatatcatag 2755 Query: 270 aatgaccgcaggagcatacagcctcttggcagtagtgctttatcatactggggacttcaa 329 ||||||||| ||||| || || || | || || ||||| || ||||||||||| || || Sbjct: 2756 aatgaccgctggagcgtatagtcttctcgctgttgtgctgtaccatactggggattttaa 2815 Query: 330 ccaggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttga 389 |||||| || || ||||| ||||| || | || || || || ||||||||||||||||| Sbjct: 2816 ccaggctaccatttatcagcagaaagcactcgacataaatgaaagggaacttggacttga 2875 Query: 390 tcacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaaca 449 ||||||||| || ||||||||||| || || || ||||| ||||| ||||| || || || Sbjct: 2876 tcacccagacacaatgaaaagctacggcgacctggctgtcttctattatcgtcttcagca 2935 Query: 450 tacagaattggcactaaagtatgtcaaccgtgccctatatcttttgcacctgacatgtgg 509 ||||| || || | |||||||||||||||||| | ||||||||||| || |||||||| Sbjct: 2936 cacagagttagccttgaagtatgtcaaccgtgccttgtatcttttgcatctaacatgtgg 2995 Query: 510 cccatctcaccctaatactgctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || || ||||| ||||| ||||| || || || || |||||||||||||| Sbjct: 2996 accatcacatccaaatacagctgccacttatataaacgtagcaatgatggaagaagg 3052
>ref|NM_101398.3| Arabidopsis thaliana unknown protein AT1G15290 mRNA, complete cds Length = 5147 Score = 141 bits (71), Expect = 3e-30 Identities = 299/375 (79%) Strand = Plus / Plus Query: 187 gacaaaggaaaacttgaggatgctgttaactacggcacaaaggctcttgcaaaactggtt 246 |||||||||||||| || |||||||| | ||| || |||||||| | | || || || Sbjct: 2617 gacaaaggaaaactagatgatgctgtgagctatggaacaaaggcattagtcaagatgatt 2676 Query: 247 gctgtttgtggtccgtatcatagaatgaccgcaggagcatacagcctcttggcagtagtg 306 ||||| ||||| || |||||||||| || ||| | || ||||| || | ||||| || Sbjct: 2677 gctgtctgtgggccttatcatagaaatactgcatgtgcgtacagtcttctcgcagttgta 2736 Query: 307 ctttatcatactggggacttcaaccaggcaactatctatcaacagaaggctttagatatt 366 || || || ||||| || || ||||||||||| || ||||| ||||||||| ||||||| Sbjct: 2737 ctataccacactggcgattttaaccaggcaacaatatatcagcagaaggctctagatata 2796 Query: 367 aacgagagggaacttggacttgatcacccagatactatgaaaagctatggagatcttgct 426 || ||||| |||||||| || || || || || ||||||||||||||||| |||||| || Sbjct: 2797 aatgagagagaacttggtctcgaccatcccgacactatgaaaagctatggggatctttct 2856 Query: 427 gttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgtgcccta 486 || || |||||||| || |||||| |||||||||||||| ||||| ||||| || | Sbjct: 2857 gtattttactatcgtcttcaacattttgaattggcactaaaatatgtgaaccgggcgttg 2916 Query: 487 tatcttttgcacctgacatgtggcccatctcaccctaatactgctgcaacttacatcaat 546 | |||| | ||| | || ||||| | ||||||||| ||||||||||| || || |||||| Sbjct: 2917 tttcttcttcacttcacttgtgggctatctcacccaaatactgctgccacatatatcaat 2976 Query: 547 gttgctatgatggaa 561 || |||||||||||| Sbjct: 2977 gtggctatgatggaa 2991
>gb|AY104995.1| Zea mays PCO071732 mRNA sequence Length = 1233 Score = 121 bits (61), Expect = 3e-24 Identities = 172/209 (82%) Strand = Plus / Plus Query: 283 gcatacagcctcttggcagtagtgctttatcatactggggacttcaaccaggcaactatc 342 ||||||||||| | || || ||||||||||||||||| || || || ||||||||||| Sbjct: 157 gcatacagccttcttgctgtggtgctttatcatactggagattttaatcaggcaactata 216 Query: 343 tatcaacagaaggctttagatattaacgagagggaacttggacttgatcacccagatact 402 |||||||||||||| | ||||| || || ||||| || || |||||||| || || ||| Sbjct: 217 tatcaacagaaggcacttgatatcaatgaaagggagctgggtcttgatcatccggaaact 276 Query: 403 atgaaaagctatggagatcttgctgttttctactatcgcctgcaacatacagaattggca 462 ||||| || ||||| ||| | |||| |||||||| ||||| ||||| | ||| |||| Sbjct: 277 atgaagagttatggggatttatctgtcttctactaccgccttcaacacattgaaatggct 336 Query: 463 ctaaagtatgtcaaccgtgccctatatct 491 |||||||||||||||||||| |||||||| Sbjct: 337 ctaaagtatgtcaaccgtgcgctatatct 365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 331 caggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttgat 390 ||||| || |||||||| || ||||| |||| || || |||||||||||||| || ||| Sbjct: 13544187 caggctacgatctatcagcaaaaggccctagacatcaatgagagggaacttgggctagat 13544246 Query: 391 cacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaacat 450 ||||| ||||| ||||| || ||||||||||||||||| |||||||| || | |||||| Sbjct: 13544247 caccctgatacaatgaagagttatggagatcttgctgtgttctactaccgtttacaacat 13544306 Query: 451 acagaattggcactaaagta 470 |||||| |||| |||||||| Sbjct: 13544307 acagaactggctctaaagta 13544326 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 ||||||||| ||||| |||||||| |||| || ||||| || |||||||| || || || Sbjct: 13545097 gtatgtcaagcgtgcactatatctactgcatcttacatgcgggccatctcatccaaacac 13545156 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 ||||| || || ||||| || ||||||||||| ||||| |||||||| || |||||||| Sbjct: 13545157 agctgcgacatatatcaacgtagctatgatggaggaaggcttgggtaatgtgcatgtagc 13545216 Query: 588 act 590 ||| Sbjct: 13545217 act 13545219
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 331 caggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttgat 390 ||||| || |||||||| || ||||| |||| || || |||||||||||||| || ||| Sbjct: 123870 caggctacgatctatcagcaaaaggccctagacatcaatgagagggaacttgggctagat 123929 Query: 391 cacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaacat 450 ||||| ||||| ||||| || ||||||||||||||||| |||||||| || | |||||| Sbjct: 123930 caccctgatacaatgaagagttatggagatcttgctgtgttctactaccgtttacaacat 123989 Query: 451 acagaattggcactaaagta 470 |||||| |||| |||||||| Sbjct: 123990 acagaactggctctaaagta 124009 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 ||||||||| ||||| |||||||| |||| || ||||| || |||||||| || || || Sbjct: 124780 gtatgtcaagcgtgcactatatctactgcatcttacatgcgggccatctcatccaaacac 124839 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 ||||| || || ||||| || ||||||||||| ||||| |||||||| || |||||||| Sbjct: 124840 agctgcgacatatatcaacgtagctatgatggaggaaggcttgggtaatgtgcatgtagc 124899 Query: 588 act 590 ||| Sbjct: 124900 act 124902
>dbj|AP005248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0084P08 Length = 158656 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 331 caggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttgat 390 ||||| || |||||||| || ||||| |||| || || |||||||||||||| || ||| Sbjct: 11806 caggctacgatctatcagcaaaaggccctagacatcaatgagagggaacttgggctagat 11865 Query: 391 cacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaacat 450 ||||| ||||| ||||| || ||||||||||||||||| |||||||| || | |||||| Sbjct: 11866 caccctgatacaatgaagagttatggagatcttgctgtgttctactaccgtttacaacat 11925 Query: 451 acagaattggcactaaagta 470 |||||| |||| |||||||| Sbjct: 11926 acagaactggctctaaagta 11945 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 ||||||||| ||||| |||||||| |||| || ||||| || |||||||| || || || Sbjct: 12716 gtatgtcaagcgtgcactatatctactgcatcttacatgcgggccatctcatccaaacac 12775 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagggttgggtaacgtccatgtagc 587 ||||| || || ||||| || ||||||||||| ||||| |||||||| || |||||||| Sbjct: 12776 agctgcgacatatatcaacgtagctatgatggaggaaggcttgggtaatgtgcatgtagc 12835 Query: 588 act 590 ||| Sbjct: 12836 act 12838
>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence Length = 141984 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 331 caggcaactatctatcaacagaaggctttagatattaacgagagggaacttggacttgat 390 |||||||| || ||||| ||||||||| ||||||| || ||||| |||||||| || || Sbjct: 75743 caggcaacaatatatcagcagaaggctctagatataaatgagagagaacttggtctcgac 75684 Query: 391 cacccagatactatgaaaagctatggagatcttgctgttttctactatcgcctgcaacat 450 || || || ||||||||||||||||| |||||| |||| || |||||||| || |||||| Sbjct: 75683 catcccgacactatgaaaagctatggggatctttctgtattttactatcgtcttcaacat 75624 Query: 451 acagaattggcactaaagta 470 ||||||||||||||||| Sbjct: 75623 tttgaattggcactaaagta 75604 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 513 atctcaccctaatactgctgcaacttacatcaatgttgctatgatggaa 561 ||||||||| ||||||||||| || || |||||||| |||||||||||| Sbjct: 75375 atctcacccaaatactgctgccacatatatcaatgtggctatgatggaa 75327
>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete sequence Length = 104001 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Minus Query: 343 tatcaacagaaggctttagatattaacgagagggaacttggacttgatcacccagatact 402 ||||| || ||||||||||| || || ||||||||||||||||||||||| |||||||| Sbjct: 65531 tatcagcaaaaggctttagacatcaatgagagggaacttggacttgatcatccagataca 65472 Query: 403 atgaaaagctatggagatcttgctgttttctactatcgcctgcaacatacaga 455 ||||| || ||||| ||||||||||| ||||| ||| | || || |||||||| Sbjct: 65471 atgaagagttatggtgatcttgctgtcttctattataggcttcagcatacaga 65419 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 502 acatgtggcccatctcaccctaatactgctgcaacttacatcaatgttgctatgatggaa 561 ||||| || |||||||| || ||||||||||| || ||||||||||| || |||||||| Sbjct: 65268 acatgcggtccatctcatccaaatactgctgctacatacatcaatgtagccatgatggag 65209 Query: 562 gaagg 566 ||||| Sbjct: 65208 gaagg 65204
>gb|AC135414.31| Medicago truncatula clone mth2-8n20, complete sequence Length = 127018 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 343 tatcaacagaaggctttagatattaacgagagggaacttggacttgatcacccagatact 402 ||||| || ||||| || ||||| || ||||| || ||||||||||| || || || || Sbjct: 48064 tatcagcaaaaggcgttggatataaatgagagagagcttggacttgaccatcctgacaca 48005 Query: 403 atgaaaagctatggagatcttgctgttttctactatcgcctgcaacata 451 ||||||||||||||||||||| |||||||||| || || |||||||||| Sbjct: 48004 atgaaaagctatggagatctttctgttttctattaccgtctgcaacata 47956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 514 tctcaccctaatactgctgcaacttacatcaatgttgctatgatggaagaagggttgggt 573 ||||| || ||||| ||||| || || || ||||||||||||||||||||||| |||| Sbjct: 47787 tctcatccaaatacagctgctacatatataaatgttgctatgatggaagaaggcatggga 47728 Query: 574 aacgtccatgtagcactccgttacctgcatga 605 || || ||||| ||||| || ||| ||||||| Sbjct: 47727 aatgttcatgtggcacttcggtacttgcatga 47696 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 190 aaaggaaaacttgaggatgctgtta 214 |||||||| |||||||||||||||| Sbjct: 48695 aaaggaaagcttgaggatgctgtta 48671
>gb|AC147009.5| Medicago truncatula clone mth2-139j3, complete sequence Length = 125303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 343 tatcaacagaaggctttagatattaacgagagggaacttggacttgatcacccagatact 402 ||||| || ||||| || ||||| || ||||| || ||||||||||| || || || || Sbjct: 78954 tatcagcaaaaggcgttggatataaatgagagagagcttggacttgaccatcctgacaca 79013 Query: 403 atgaaaagctatggagatcttgctgttttctactatcgcctgcaacata 451 ||||||||||||||||||||| |||||||||| || || |||||||||| Sbjct: 79014 atgaaaagctatggagatctttctgttttctattaccgtctgcaacata 79062 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Plus Query: 514 tctcaccctaatactgctgcaacttacatcaatgttgctatgatggaagaagggttgggt 573 ||||| || ||||| ||||| || || || ||||||||||||||||||||||| |||| Sbjct: 79231 tctcatccaaatacagctgctacatatataaatgttgctatgatggaagaaggcatggga 79290 Query: 574 aacgtccatgtagcactccgttacctgcatga 605 || || ||||| ||||| || ||| ||||||| Sbjct: 79291 aatgttcatgtggcacttcggtacttgcatga 79322 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 aaaggaaaacttgaggatgctgtta 214 |||||||| |||||||||||||||| Sbjct: 78323 aaaggaaagcttgaggatgctgtta 78347
>ref|XM_474099.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5163 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 301 gtagtgctttatcatactggggacttcaaccaggcaactatctatcaacagaaggcttta 360 ||||| ||||| |||||||| || || || ||||||||||| ||||| |||||||| | Sbjct: 2821 gtagttctttaccatactggagattttaatcaggcaactatatatcagcagaaggcactt 2880 Query: 361 gatattaacgagagggaacttggacttgatcacccagatactatgaaaagctatggagat 420 ||||| || || || || || || ||||| |||||||| |||||||| || || || ||| Sbjct: 2881 gatatcaatgaaagagagctaggtcttgaccacccagaaactatgaagagttacggggat 2940 Query: 421 cttgctgttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgt 480 | |||| |||||||| || || || || | ||| |||| |||||||||||||||||| Sbjct: 2941 ttatctgtcttctactaccgtctccagcacatcgaaatggctctaaagtatgtcaaccgt 3000 Query: 481 gccctatatct 491 || |||||||| Sbjct: 3001 gcactatatct 3011 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 3049 gctgccacatacataaatgtggctatgatggaagaagg 3086 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaaggc 230 |||| |||||||||||||| ||||| || |||| ||| |||||||| Sbjct: 2705 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaaggc 2750
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 |||||||||||||||| | ||||||||||| || |||||||| ||||| || || ||||| Sbjct: 68075 gtatgtcaaccgtgccttgtatcttttgcatctaacatgtggaccatcacatccaaatac 68016 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| ||||| || || || || |||||||||||||| Sbjct: 68015 agctgccacttatataaacgtagcaatgatggaagaagg 67977 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 373 agggaacttggacttgatcacccagatactatgaaaagctatggagatcttgctgttttc 432 |||||||||||||||||||||||||| || ||||||||||| || || || ||||| ||| Sbjct: 68252 agggaacttggacttgatcacccagacacaatgaaaagctacggcgacctggctgtcttc 68193 Query: 433 tactatcg 440 || ||||| Sbjct: 68192 tattatcg 68185 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 262 tatcatagaatgaccgcaggagcatacagcctcttggcagtagtgctttatcatactggg 321 ||||||||||||||||| ||||| || || || | || || ||||| || ||||||||| Sbjct: 68462 tatcatagaatgaccgctggagcgtatagtcttctcgctgttgtgctgtaccatactggg 68403 Query: 322 gacttcaaccagg 334 || || ||||||| Sbjct: 68402 gattttaaccagg 68390
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 77.8 bits (39), Expect = 4e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 468 gtatgtcaaccgtgccctatatcttttgcacctgacatgtggcccatctcaccctaatac 527 |||||||||||||||| | ||||||||||| || |||||||| ||||| || || ||||| Sbjct: 62939 gtatgtcaaccgtgccttgtatcttttgcatctaacatgtggaccatcacatccaaatac 62880 Query: 528 tgctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| ||||| || || || || |||||||||||||| Sbjct: 62879 agctgccacttatataaacgtagcaatgatggaagaagg 62841 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 373 agggaacttggacttgatcacccagatactatgaaaagctatggagatcttgctgttttc 432 |||||||||||||||||||||||||| || ||||||||||| || || || ||||| ||| Sbjct: 63116 agggaacttggacttgatcacccagacacaatgaaaagctacggcgacctggctgtcttc 63057 Query: 433 tactatcg 440 || ||||| Sbjct: 63056 tattatcg 63049 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 262 tatcatagaatgaccgcaggagcatacagcctcttggcagtagtgctttatcatactggg 321 ||||||||||||||||| ||||| || || || | || || ||||| || ||||||||| Sbjct: 63326 tatcatagaatgaccgctggagcgtatagtcttctcgctgttgtgctgtaccatactggg 63267 Query: 322 gacttcaaccagg 334 || || ||||||| Sbjct: 63266 gattttaaccagg 63254
>dbj|AK100454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091D11, full insert sequence Length = 2669 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 301 gtagtgctttatcatactggggacttcaaccaggcaactatctatcaacagaaggcttta 360 ||||| ||||| |||||||| || || || ||||||||||| ||||| |||||||| | Sbjct: 126 gtagttctttaccatactggagattttaatcaggcaactatatatcagcagaaggcactt 185 Query: 361 gatattaacgagagggaacttggacttgatcacccagatactatgaaaagctatggagat 420 ||||| || || || || || || ||||| |||||||| |||||||| || || || ||| Sbjct: 186 gatatcaatgaaagagagctaggtcttgaccacccagaaactatgaagagttacggggat 245 Query: 421 cttgctgttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgt 480 | |||| |||||||| || || || || | ||| |||| |||||||||||||||||| Sbjct: 246 ttatctgtcttctactaccgtctccagcacatcgaaatggctctaaagtatgtcaaccgt 305 Query: 481 gccctatatct 491 || |||||||| Sbjct: 306 gcactatatct 316 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 354 gctgccacatacataaatgtggctatgatggaagaagg 391 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaaggc 230 |||| |||||||||||||| ||||| || |||| ||| |||||||| Sbjct: 10 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaaggc 55
>dbj|AK072140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122D02, full insert sequence Length = 3637 Score = 77.8 bits (39), Expect = 4e-11 Identities = 153/191 (80%) Strand = Plus / Plus Query: 301 gtagtgctttatcatactggggacttcaaccaggcaactatctatcaacagaaggcttta 360 ||||| ||||| |||||||| || || || ||||||||||| ||||| |||||||| | Sbjct: 2856 gtagttctttaccatactggagattttaatcaggcaactatatatcagcagaaggcactt 2915 Query: 361 gatattaacgagagggaacttggacttgatcacccagatactatgaaaagctatggagat 420 ||||| || || || || || || ||||| |||||||| |||||||| || || || ||| Sbjct: 2916 gatatcaatgaaagagagctaggtcttgaccacccagaaactatgaagagttacggggat 2975 Query: 421 cttgctgttttctactatcgcctgcaacatacagaattggcactaaagtatgtcaaccgt 480 | |||| |||||||| || || || || | ||| |||| |||||||||||||||||| Sbjct: 2976 ttatctgtcttctactaccgtctccagcacatcgaaatggctctaaagtatgtcaaccgt 3035 Query: 481 gccctatatct 491 || |||||||| Sbjct: 3036 gcactatatct 3046 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 3084 gctgccacatacataaatgtggctatgatggaagaagg 3121 Score = 44.1 bits (22), Expect = 0.54 Identities = 40/46 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaaggc 230 |||| |||||||||||||| ||||| || |||| ||| |||||||| Sbjct: 2740 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaaggc 2785
>gb|AY023819.1| Oryza sativa microsatellite MRG6144 containing (ATAC)X7, genomic sequence Length = 228 Score = 71.9 bits (36), Expect = 2e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 329 accaggcaactatctatcaacagaaggctttagatattaacgagagggaact 380 |||||||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 177 accaggcaacaatctatcaacagaaggctttagatataaatgagagagaact 228
>ref|XM_473801.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gttgctgtttgtggtccgtatc 265 |||||||||||||||||||||| Sbjct: 252 gttgctgtttgtggtccgtatc 273
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gttgctgtttgtggtccgtatc 265 |||||||||||||||||||||| Sbjct: 110696 gttgctgtttgtggtccgtatc 110717
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gttgctgtttgtggtccgtatc 265 |||||||||||||||||||||| Sbjct: 38719 gttgctgtttgtggtccgtatc 38740
>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11, complete sequence Length = 134231 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 21339 gctgccacatacataaatgtggctatgatggaagaagg 21376 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||| |||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 20391 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaagg 20435 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatct 491 ||||||||||||||| |||||||| Sbjct: 21278 gtatgtcaaccgtgcactatatct 21301
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 32878490 gctgccacatacataaatgtggctatgatggaagaagg 32878527 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gttgctgtttgtggtccgtatc 265 |||||||||||||||||||||| Sbjct: 30634988 gttgctgtttgtggtccgtatc 30635009 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||| |||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 32877542 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaagg 32877586 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatct 491 ||||||||||||||| |||||||| Sbjct: 32878429 gtatgtcaaccgtgcactatatct 32878452
>dbj|AK073472.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044G24, full insert sequence Length = 1040 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 244 gttgctgtttgtggtccgtatc 265 |||||||||||||||||||||| Sbjct: 367 gttgctgtttgtggtccgtatc 388
>emb|AL117265.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811D08, complete sequence Length = 123337 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 1581 gctgccacatacataaatgtggctatgatggaagaagg 1618 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||| |||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 633 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaagg 677 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatct 491 ||||||||||||||| |||||||| Sbjct: 1520 gtatgtcaaccgtgcactatatct 1543
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 73872 gctgccacatacataaatgtggctatgatggaagaagg 73909 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||| |||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 72924 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaagg 72968 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatct 491 ||||||||||||||| |||||||| Sbjct: 73811 gtatgtcaaccgtgcactatatct 73834
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 529 gctgcaacttacatcaatgttgctatgatggaagaagg 566 ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 140777 gctgccacatacataaatgtggctatgatggaagaagg 140814 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 185 tggacaaaggaaaacttgaggatgctgttaactacggcacaaagg 229 |||| |||||||||||||| ||||| || |||| ||| ||||||| Sbjct: 139829 tggataaaggaaaacttgatgatgccgtcaacttcggaacaaagg 139873 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 gtatgtcaaccgtgccctatatct 491 ||||||||||||||| |||||||| Sbjct: 140716 gtatgtcaaccgtgcactatatct 140739
>emb|AL353147.10| Human DNA sequence from clone RP11-188P8 on chromosome 10 Contains the 3' end of a novel gene, a NADH dehydrogenase 2 (MTND2) pseudogene, the 5' end of the gene for tumor endothelial marker 7-related precursor (TEM7R) (FLJ14623) and a CpG island, complete sequence Length = 98002 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 338 ctatctatcaacagaaggctt 358 ||||||||||||||||||||| Sbjct: 88792 ctatctatcaacagaaggctt 88772
>gb|AC122720.2| Homo sapiens chromosome 5 clone RP11-67M9, complete sequence Length = 160505 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 237 aaaactggttgctgtttgtgg 257 ||||||||||||||||||||| Sbjct: 54002 aaaactggttgctgtttgtgg 53982
>gb|AC154551.2| Mus musculus BAC clone RP23-238B16 from chromosome 16, complete sequence Length = 129286 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 atcaatgttgctatgatggaa 561 ||||||||||||||||||||| Sbjct: 90109 atcaatgttgctatgatggaa 90129
>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete sequence Length = 222380 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 190 aaaggaaaacttgaggatgct 210 ||||||||||||||||||||| Sbjct: 208265 aaaggaaaacttgaggatgct 208245
>emb|CT033776.8| Mouse DNA sequence from clone RP24-83D14 on chromosome 16, complete sequence Length = 224534 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 atcaatgttgctatgatggaa 561 ||||||||||||||||||||| Sbjct: 161365 atcaatgttgctatgatggaa 161385
>dbj|AB066002.1| Chordaria chordaeformis DNA, 26S rRNA, IGS, 5S rRNA, partial and complete sequence, strain:Spitsbergen_2 Length = 632 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 atggaagaagggttgggtaac 576 ||||||||||||||||||||| Sbjct: 220 atggaagaagggttgggtaac 240
>dbj|AB066001.1| Chordaria chordaeformis DNA, 26S rRNA, IGS, 5S rRNA, partial and complete sequence, strain:Spitsbergen_1 Length = 638 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 atggaagaagggttgggtaac 576 ||||||||||||||||||||| Sbjct: 223 atggaagaagggttgggtaac 243
>dbj|AB066000.1| Chordaria chordaeformis DNA, 26S rRNA, IGS, 5S rRNA, partial and complete sequence, strain:Spitsbergen_6 Length = 634 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 556 atggaagaagggttgggtaac 576 ||||||||||||||||||||| Sbjct: 222 atggaagaagggttgggtaac 242
>ref|XM_757695.1| Theileria parva strain Muguga chromosome 3 hypothetical protein (TP03_0664) partial mRNA Length = 1173 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaggaaaacttgaggatgct 210 |||||||||||||||||||| Sbjct: 857 aaggaaaacttgaggatgct 876 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaggaaaacttgaggatgct 210 |||||||||||||||||||| Sbjct: 761 aaggaaaacttgaggatgct 780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aaggaaaacttgaggatgct 210 |||||||||||||||||||| Sbjct: 665 aaggaaaacttgaggatgct 684
>gb|AC079440.38| Mus musculus strain 129/Sv clone ct7-340l7 map 2, complete sequence Length = 131387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tttcctggacaaaggaaaac 199 |||||||||||||||||||| Sbjct: 10340 tttcctggacaaaggaaaac 10359
>emb|AL590110.11| Human DNA sequence from clone RP11-254O21 on chromosome 1 Contains the 3' end of a novel gene, complete sequence Length = 128843 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 aaacttgaggatgctgttaa 215 |||||||||||||||||||| Sbjct: 109652 aaacttgaggatgctgttaa 109633
>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence Length = 253733 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tggcctctgccataaggtag 32 |||||||||||||||||||| Sbjct: 139411 tggcctctgccataaggtag 139430
>gb|AC079439.26| Mus musculus strain 129/Sv chromosome 2 clone ct7-295g23, complete sequence Length = 115747 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tttcctggacaaaggaaaac 199 |||||||||||||||||||| Sbjct: 99592 tttcctggacaaaggaaaac 99611
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgcaccctgttggagtcatc 173 |||||||||||||||||||| Sbjct: 4088911 cgcaccctgttggagtcatc 4088930
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gtaaagtctgatatcatcag 106 |||||||||||||||||||| Sbjct: 32917147 gtaaagtctgatatcatcag 32917166
>gb|AC009952.4|AC009952 Homo sapiens BAC clone RP11-175I4 from Y, complete sequence Length = 148058 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tgttgctatgatggaagaag 565 |||||||||||||||||||| Sbjct: 78119 tgttgctatgatggaagaag 78138
>emb|BX901906.3| Mouse DNA sequence from clone RP23-328F9 on chromosome 2, complete sequence Length = 213629 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tttcctggacaaaggaaaac 199 |||||||||||||||||||| Sbjct: 118773 tttcctggacaaaggaaaac 118792
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 gtaaagtctgatatcatcag 106 |||||||||||||||||||| Sbjct: 138552 gtaaagtctgatatcatcag 138571
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ttgaggatgctgttaactacggca 223 |||| ||||||||||||||||||| Sbjct: 292154 ttgaagatgctgttaactacggca 292177
>dbj|AP001646.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-718B12, complete sequence Length = 182329 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 cagaattggcactaaagtat 471 |||||||||||||||||||| Sbjct: 48477 cagaattggcactaaagtat 48496
>emb|AL844146.2| Mouse DNA sequence from clone RP24-89J1 on chromosome 2, complete sequence Length = 233417 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tttcctggacaaaggaaaac 199 |||||||||||||||||||| Sbjct: 24406 tttcctggacaaaggaaaac 24387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,333,781 Number of Sequences: 3902068 Number of extensions: 4333781 Number of successful extensions: 78486 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78202 Number of HSP's gapped (non-prelim): 271 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
