| Clone Name | baal2c07 |
|---|---|
| Clone Library Name | barley_pub |
>O2T27_HUMAN (Q8NH04) Olfactory receptor 2T27 (Olfactory receptor OR1-67)| Length = 317 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Frame = +1 Query: 76 VAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGM 249 + P ++ +V+ +++ + + L LTL+ +FL GL+ D+YVA+ N L + M Sbjct: 77 IVPKMLVDQVMSQRAISFAGCTAQHFLYLTLAGAEFFLLGLMSYDRYVAICNPLHYPVLM 136 Query: 250 IQMVLYM 270 + + ++ Sbjct: 137 SRKICWL 143
>OR2T1_HUMAN (O43869) Olfactory receptor 2T1 (Olfactory receptor 1-25) (OR1-25)| (Olfactory receptor OR1-61) Length = 311 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%) Frame = +1 Query: 76 VAPLSIIGRVIKTKSVEYMPFSLS--LTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGM 249 + P ++ ++ +++ ++ + L LTL +FL GL+ D+YVA+ N L + M Sbjct: 76 IVPKMLVNYLLDQRTISFVGCTAQHFLYLTLVGAEFFLLGLMAYDRYVAICNPLRYPVLM 135 Query: 250 IQMVLYM 270 + V +M Sbjct: 136 SRRVCWM 142
>RS7_DEHSC (Q3ZZM7) 30S ribosomal protein S7| Length = 156 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 242 KVKPRMFGSATY-LSLMSRP*RNQTMALRVSVREREK 135 +VKPR G ATY + + RP R QTMA+R ++ K Sbjct: 74 EVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARK 110
>RS7_DEHE1 (Q3Z984) 30S ribosomal protein S7| Length = 156 Score = 30.8 bits (68), Expect = 2.9 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -1 Query: 242 KVKPRMFGSATY-LSLMSRP*RNQTMALRVSVREREK 135 +VKPR G ATY + + RP R QTMA+R ++ K Sbjct: 74 EVKPRRVGGATYQVPIEVRPDRAQTMAMRWIIKAARK 110
>Y110_METJA (Q57574) Hypothetical protein MJ0110| Length = 93 Score = 30.8 bits (68), Expect = 2.9 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 79 APLSIIGRVIKTKSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKYVALPNILGFTF 243 A L + + +K K + + + +T T +W +YG+L D + + NIL F Sbjct: 23 ASLPQLIKSLKEKDMSNISLAFVITFTTGLTLWLIYGILRNDYPIIVFNILSLMF 77
>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2333 Score = 30.4 bits (67), Expect = 3.8 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = -1 Query: 428 SPAISVTGRTSAHELLSALPTLITTTWSSAGTFHASFPSLASVATT 291 S A V+G +S E+ S+LP+ T+ +G FH +FP++ V T Sbjct: 1698 SGAAEVSGESSGAEVGSSLPS---GTYEGSGNFHPAFPTVFLVDRT 1740
>Y3374_BACAN (Q81N43) UPF0078 membrane protein BA3374/GBAA3374/BAS3128| Length = 190 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 1/63 (1%) Frame = +1 Query: 46 ICVGFSVCVFVAPLSI-IGRVIKTKSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKYVALP 222 + V +F++PL + +G V+ ++ + + +SL+ L+ I F+Y L+ +DK + Sbjct: 104 VATATGVFLFLSPLGVLVGFVVFVLTLLFTKY-VSLSSMLAGIALFIYSLIFEDKVIIAL 162 Query: 223 NIL 231 ++L Sbjct: 163 SLL 165
>OR2T2_HUMAN (Q6IF00) Olfactory receptor 2T2 (Olfactory receptor OR1-43)| Length = 324 Score = 29.3 bits (64), Expect = 8.5 Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Frame = +1 Query: 64 VCVFVAPLSIIGRVIKTKSVEYMPFSLSLTLTLSAI--VWFLYGLLIKDKYVALPNILGF 237 +C+ V P + + K K++ ++ ++ + L L+ I +FL GL+ D+YVA+ N L + Sbjct: 75 ICITV-PKMLQDLLSKDKTISFLGCAVQIFLYLTLIGGEFFLLGLMAYDRYVAVCNPLRY 133 Query: 238 TFGMIQMV 261 M + V Sbjct: 134 PLLMNRRV 141
>Y1376_HAEIN (P44170) Hypothetical protein HI1376| Length = 291 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/57 (28%), Positives = 30/57 (52%) Frame = +1 Query: 115 KSVEYMPFSLSLTLTLSAIVWFLYGLLIKDKYVALPNILGFTFGMIQMVLYMFYMNA 285 KS P +L ++ +L+A V F+Y L + ++ + I G G++ +FY+ A Sbjct: 174 KSGGAFPATLFISFSLAACVMFIYLFLKRVQWTSSSVIGGIVLGVLNFFNILFYIKA 230 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,063,451 Number of Sequences: 219361 Number of extensions: 1014570 Number of successful extensions: 3721 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3719 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)