ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal2b19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Pep... 30 5.3
2NICE1_HUMAN (Q9UGL9) Protein NICE-1 30 6.9

>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide|
           transporter 2) (Kidney H(+)/peptide cotransporter)
           (Solute carrier family 15 member 2)
          Length = 729

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
 Frame = -3

Query: 122 MGPLSSQERRLVYLIPMSTARFLPRP--PPKAGVGRIGGTS 6
           M P    E +     P+ST   LPRP  PPK    +I G+S
Sbjct: 1   MNPFQKNESKETLFSPVSTEEMLPRPPSPPKKSPPKIFGSS 41



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>NICE1_HUMAN (Q9UGL9) Protein NICE-1|
          Length = 99

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
 Frame = -1

Query: 274 TPAPASASPC-----GCCPWSAACTGSS 206
           TPAPAS+S C     GCC  S  C  SS
Sbjct: 30  TPAPASSSSCCGSGRGCCGDSGCCGSSS 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,425,034
Number of Sequences: 219361
Number of extensions: 1270445
Number of successful extensions: 4170
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4165
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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