ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2b07 |
|---|---|
| Clone Library Name | barley_pub |
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 286 bits (731), Expect(2) = 6e-88 Identities = 142/164 (86%), Positives = 152/164 (92%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMS 235 AA+ NS AYK+YSK I ELNKACNLRG+LKF D+ SK+ + EVEPASEIVKRFCTGAMS Sbjct: 942 AARTNSVDAYKQYSKTIHELNKACNLRGLLKFKDAASKVPISEVEPASEIVKRFCTGAMS 1001 Query: 236 YGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGV 415 YGSISLEAHTALA AMN +GGKSNTGEGGEQPSRMEPL+DGS NPKRSAIKQVASGRFGV Sbjct: 1002 YGSISLEAHTALATAMNTIGGKSNTGEGGEQPSRMEPLADGSRNPKRSAIKQVASGRFGV 1061 Query: 416 SSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHSTA 547 SSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIA+TR+STA Sbjct: 1062 SSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAITRNSTA 1105 Score = 58.5 bits (140), Expect(2) = 6e-88 Identities = 26/26 (100%), Positives = 26/26 (100%) Frame = +3 Query: 549 GVGLISPPPHHDIYSIEDLAQLIHDL 626 GVGLISPPPHHDIYSIEDLAQLIHDL Sbjct: 1106 GVGLISPPPHHDIYSIEDLAQLIHDL 1131
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 211 bits (536), Expect(2) = 6e-64 Identities = 107/165 (64%), Positives = 135/165 (81%), Gaps = 1/165 (0%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKF-IDSTSKISLDEVEPASEIVKRFCTGAM 232 A + + AAY E+S+ E + C LRGML F DS+ I +++VEP +EIV+RFCTGAM Sbjct: 889 AVRNKNEAAYAEFSRTHYEQTRRCTLRGMLDFDFDSSQAIPIEQVEPWTEIVRRFCTGAM 948 Query: 233 SYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFG 412 SYGSIS+E+H++LA+AMN+LGGKSNTGEGGE P+R + L++G + RSAIKQ+ASGRFG Sbjct: 949 SYGSISMESHSSLAIAMNRLGGKSNTGEGGEDPARSQRLANG--DTMRSAIKQIASGRFG 1006 Query: 413 VSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHSTA 547 V+S+YL++ADELQIKMAQGAKPGEGGELPG+KV IA TRHSTA Sbjct: 1007 VTSWYLSDADELQIKMAQGAKPGEGGELPGNKVSESIAKTRHSTA 1051 Score = 53.5 bits (127), Expect(2) = 6e-64 Identities = 23/26 (88%), Positives = 25/26 (96%) Frame = +3 Query: 549 GVGLISPPPHHDIYSIEDLAQLIHDL 626 GVGLISPPPHHDIYSIEDL QLI+D+ Sbjct: 1052 GVGLISPPPHHDIYSIEDLKQLIYDM 1077
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 177 bits (450), Expect(2) = 2e-56 Identities = 98/171 (57%), Positives = 120/171 (70%) Frame = +2 Query: 32 LQWQNCKXAAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVK 211 LQW A + N +K+Y+K E + LR + F + + L+EVE A IVK Sbjct: 809 LQW-----ACRRNDYNLFKQYTKAADE-ERIGFLRNLFAFDGNRKPLKLEEVESAESIVK 862 Query: 212 RFCTGAMSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQ 391 RF TGAMS+GS+S EAH ALA+AMN+LGGKSN+GEGGE P R P +G + +RSAIKQ Sbjct: 863 RFKTGAMSFGSLSKEAHEALAIAMNRLGGKSNSGEGGEDPKRFVPDENG--DDRRSAIKQ 920 Query: 392 VASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHST 544 +ASGRFGV S+YL NADELQIKMAQGAKPGEGG+LPG+KV +A R ST Sbjct: 921 IASGRFGVKSHYLVNADELQIKMAQGAKPGEGGQLPGNKVYPWVADVRGST 971 Score = 61.2 bits (147), Expect(2) = 2e-56 Identities = 27/27 (100%), Positives = 27/27 (100%) Frame = +3 Query: 546 PGVGLISPPPHHDIYSIEDLAQLIHDL 626 PGVGLISPPPHHDIYSIEDLAQLIHDL Sbjct: 972 PGVGLISPPPHHDIYSIEDLAQLIHDL 998
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 178 bits (452), Expect(2) = 3e-56 Identities = 100/164 (60%), Positives = 118/164 (71%), Gaps = 1/164 (0%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELN-KACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAM 232 A + + YK+Y+ + E N K LRG+L F D S I L+EVEP I+KRF TGAM Sbjct: 847 AVREGNYELYKQYAALVNEQNQKFFTLRGLLDFQDRES-IPLEEVEPIEAIMKRFKTGAM 905 Query: 233 SYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFG 412 SYGSIS EAH +LA+AMN++GGKSNTGEGGE P R +D + K SAIKQVASGRFG Sbjct: 906 SYGSISKEAHESLAIAMNRIGGKSNTGEGGEDPERFTWTNDQG-DSKNSAIKQVASGRFG 964 Query: 413 VSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHST 544 V+S YL+ A E+QIKMAQGAKPGEGG+LPG KV IA RHST Sbjct: 965 VTSLYLSQAKEIQIKMAQGAKPGEGGQLPGKKVYPWIAKVRHST 1008 Score = 60.1 bits (144), Expect(2) = 3e-56 Identities = 26/27 (96%), Positives = 27/27 (100%) Frame = +3 Query: 546 PGVGLISPPPHHDIYSIEDLAQLIHDL 626 PGVGLISPPPHHDIYSIEDLA+LIHDL Sbjct: 1009 PGVGLISPPPHHDIYSIEDLAELIHDL 1035
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 179 bits (454), Expect(2) = 7e-55 Identities = 93/156 (59%), Positives = 119/156 (76%), Gaps = 1/156 (0%) Frame = +2 Query: 80 AYKEYSKRIQELNKACNLRGMLKF-IDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLE 256 +++ Y K+ E + C LRG+L+ +++ I L++VEP +EI +RF +GAMSYGSIS+E Sbjct: 889 SWQLYVKKEMEAIRDCTLRGLLELDFENSVSIPLEQVEPWTEIARRFASGAMSYGSISME 948 Query: 257 AHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTN 436 AH+ LA+AMN+LG KSN GEGGE R +G + RSAIKQVAS RFGV+SYYL++ Sbjct: 949 AHSTLAIAMNRLGAKSNCGEGGEDAERSAVQENG--DTMRSAIKQVASARFGVTSYYLSD 1006 Query: 437 ADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHST 544 ADE+QIK+AQGAKPGEGGELP HKV DIA TRHST Sbjct: 1007 ADEIQIKIAQGAKPGEGGELPAHKVSKDIAKTRHST 1042 Score = 54.7 bits (130), Expect(2) = 7e-55 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +3 Query: 546 PGVGLISPPPHHDIYSIEDLAQLIHDL 626 P VGLISPPPHHDIYSIEDL QLI+DL Sbjct: 1043 PNVGLISPPPHHDIYSIEDLKQLIYDL 1069
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 159 bits (403), Expect(2) = 2e-49 Identities = 90/177 (50%), Positives = 115/177 (64%), Gaps = 15/177 (8%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMS 235 A + S +AY Y + + LR +L+F + IS+ +VEPA+ IV+RFCTG MS Sbjct: 814 AVRNKSESAYAVYQQHLAN-RPVSVLRDLLEFKSDRAPISVGKVEPATSIVERFCTGGMS 872 Query: 236 YGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSD-------------GSMN--P 370 G+IS E H A+A+AMN+LGGKSN+GEGGE P R PL+D G N Sbjct: 873 LGAISRETHEAIAIAMNRLGGKSNSGEGGEDPIRWRPLTDVVDGYSSTLPHLKGLQNGDT 932 Query: 371 KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHS 541 SAIKQVASGRFGV+ +L NAD+++IK+AQGAKPGEGG+LPG KV IA R+S Sbjct: 933 ATSAIKQVASGRFGVTPTFLVNADQIEIKIAQGAKPGEGGQLPGKKVSAYIARLRNS 989 Score = 56.2 bits (134), Expect(2) = 2e-49 Identities = 25/28 (89%), Positives = 27/28 (96%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI+DL Sbjct: 990 KPGVPLISPPPHHDIYSIEDLAQLIYDL 1017
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 157 bits (397), Expect(2) = 2e-48 Identities = 91/178 (51%), Positives = 115/178 (64%), Gaps = 16/178 (8%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACN-LRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAM 232 A + S AY Y + + N+ N LR +L+F + I + +VEPA IV+RFCTG M Sbjct: 945 AVREKSETAYAVYQQHLS--NRPVNVLRDLLEFKSDRAPIPVGKVEPAVAIVQRFCTGGM 1002 Query: 233 SYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSD-------------GSMNP- 370 S G+IS E H A+A+AMN++GGKSN+GEGGE P R +PL+D G N Sbjct: 1003 SLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGD 1062 Query: 371 -KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHS 541 SAIKQVASGRFGV+ +L NAD+L+IK+AQGAKPGEGG+LPG KV IA R S Sbjct: 1063 IATSAIKQVASGRFGVTPTFLVNADQLEIKVAQGAKPGEGGQLPGKKVSAYIARLRSS 1120 Score = 55.1 bits (131), Expect(2) = 2e-48 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 1121 KPGVPLISPPPHHDIYSIEDLAQLIFDL 1148
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 156 bits (394), Expect(2) = 5e-48 Identities = 89/177 (50%), Positives = 112/177 (63%), Gaps = 15/177 (8%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMS 235 A + S AY Y + + R +L+F + I + +VEPAS IV+RFCTG MS Sbjct: 921 AVREKSETAYAVYQQHLAN-RPITVFRDLLEFKSDRNPIPVGKVEPASSIVERFCTGGMS 979 Query: 236 YGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSD-------------GSMN--P 370 G+IS E H +A+AMN+LGGKSN+GEGGE P R +PL+D G N Sbjct: 980 LGAISRETHETIAIAMNRLGGKSNSGEGGEDPIRWKPLTDVVDGYSSTLPHLKGLRNGDT 1039 Query: 371 KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHS 541 SAIKQVASGRFGV+ +L NAD+L+IK+AQGAKPGEGG+LPG KV IA R+S Sbjct: 1040 ATSAIKQVASGRFGVTPTFLVNADQLEIKVAQGAKPGEGGQLPGKKVSAYIARLRNS 1096 Score = 55.1 bits (131), Expect(2) = 5e-48 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 1097 KPGVPLISPPPHHDIYSIEDLAQLIFDL 1124
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 151 bits (381), Expect(2) = 2e-46 Identities = 84/153 (54%), Positives = 104/153 (67%) Frame = +2 Query: 83 YKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAH 262 Y+EY+K + E A LR +L + +++ +VEPASE+ KRF T AMS G++S EAH Sbjct: 846 YQEYAKLVNE-RPATTLRDLLAITPGENAVNIADVEPASELFKRFDTAAMSIGALSPEAH 904 Query: 263 TALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTNAD 442 ALA AMN +GG SN+GEGGE P+R K S IKQVASGRFGV+ YL NAD Sbjct: 905 EALAEAMNSIGGNSNSGEGGEDPARYG-------TNKVSRIKQVASGRFGVTPAYLVNAD 957 Query: 443 ELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHS 541 +QIK+AQGAKPGEGG+LPG KV IA R+S Sbjct: 958 VIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYS 990 Score = 54.7 bits (130), Expect(2) = 2e-46 Identities = 25/27 (92%), Positives = 25/27 (92%) Frame = +3 Query: 546 PGVGLISPPPHHDIYSIEDLAQLIHDL 626 PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 992 PGVTLISPPPHHDIYSIEDLAQLIFDL 1018
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 149 bits (375), Expect(2) = 3e-46 Identities = 81/152 (53%), Positives = 103/152 (67%), Gaps = 15/152 (9%) Frame = +2 Query: 131 LRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVAMNKLGGKSNT 310 LR +L+ + I + +VE A+ IV+RFCTG MS G+IS E H A+A+AMN++GGKSN+ Sbjct: 935 LRDLLELKSDRAPIPIGKVESATSIVERFCTGGMSLGAISRETHEAIAIAMNRIGGKSNS 994 Query: 311 GEGGEQPSRMEPLSD-------------GSMN--PKRSAIKQVASGRFGVSSYYLTNADE 445 GEGGE P R PL+D G N SAIKQVASGRFGV+ +L NAD+ Sbjct: 995 GEGGEDPIRWNPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLVNADQ 1054 Query: 446 LQIKMAQGAKPGEGGELPGHKVIGDIAVTRHS 541 ++IK+AQGAKPGEGG+LPG KV IA R+S Sbjct: 1055 IEIKIAQGAKPGEGGQLPGKKVSAYIARLRNS 1086 Score = 56.2 bits (134), Expect(2) = 3e-46 Identities = 25/28 (89%), Positives = 27/28 (96%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI+DL Sbjct: 1087 KPGVPLISPPPHHDIYSIEDLAQLIYDL 1114
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 143 bits (361), Expect(2) = 1e-44 Identities = 89/182 (48%), Positives = 104/182 (57%), Gaps = 18/182 (9%) Frame = +2 Query: 50 KXAAKVNSRAAYKEYSKRIQELNK--ACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCT 223 K N+ AY Y Q L LR +L F ISL+EVE IVKRFCT Sbjct: 849 KVGGNGNNGEAYDHYELYRQYLKDRPVTALRDLLDFNADQPAISLEEVESVESIVKRFCT 908 Query: 224 GAMSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSD--------------GS 361 G MS G++S EAH LA+AMN+LG KSN+GEGGE R L D G Sbjct: 909 GGMSLGALSREAHETLAIAMNRLGAKSNSGEGGEDVVRYLTLDDVDSEGNSPTLPHLHGL 968 Query: 362 MN--PKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTR 535 N SAIKQ+ASGRFGV+ YL + +L+IKMAQGAKPGEGG+LPG KV IA+ R Sbjct: 969 QNGDTANSAIKQIASGRFGVTPEYLMSGKQLEIKMAQGAKPGEGGQLPGKKVSEYIAMLR 1028 Query: 536 HS 541 S Sbjct: 1029 RS 1030 Score = 56.2 bits (134), Expect(2) = 1e-44 Identities = 25/28 (89%), Positives = 27/28 (96%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI+DL Sbjct: 1031 KPGVTLISPPPHHDIYSIEDLAQLIYDL 1058
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 142 bits (359), Expect(2) = 5e-44 Identities = 82/176 (46%), Positives = 109/176 (61%), Gaps = 16/176 (9%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMS 235 A + N+ Y+ Y K++ N+R +L+F + + L++VE EI KRFCTG MS Sbjct: 850 AVRENNYTLYEAY-KQLLANRPPTNIRDLLEFNFRSCSVPLEKVENIFEITKRFCTGGMS 908 Query: 236 YGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSD--------------GSMN-- 367 G++S EAH L++AMN++GGKSN+GEGGE R L+D G N Sbjct: 909 LGALSREAHETLSIAMNRIGGKSNSGEGGEDSLRFTVLTDVDETGNSPSFPHLKGLKNGD 968 Query: 368 PKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTR 535 SAIKQ+ASGRFGV+ YL NA +L+IK++QGAKPGEGG+LPG KV IA R Sbjct: 969 SLSSAIKQIASGRFGVTPEYLVNAKQLEIKISQGAKPGEGGQLPGKKVSPYIATLR 1024 Score = 55.1 bits (131), Expect(2) = 5e-44 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 1027 KPGVTLISPPPHHDIYSIEDLAQLIFDL 1054
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 142 bits (359), Expect(2) = 5e-44 Identities = 77/177 (43%), Positives = 106/177 (59%), Gaps = 16/177 (9%) Frame = +2 Query: 56 AAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMS 235 A + N Y +Y + + + NLR +L+ IS+D+VE + ++ RFCTG MS Sbjct: 839 AVRNNDNILYSKYKSLLND-RRPTNLRDLLELKTDRQPISIDQVEDVNSVLMRFCTGGMS 897 Query: 236 YGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNP--------------- 370 G++S E H LA+ MN++GGKSN+GEGGE +R + + D + Sbjct: 898 LGALSRETHETLAIRMNRIGGKSNSGEGGEDSTRFKSIQDLDTSGVSRTFSHLKGLKIND 957 Query: 371 -KRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRH 538 SAIKQ+ASGRFGV+ YL NA +L+IK+AQGAKPGEGG+LPG KV IA R+ Sbjct: 958 LASSAIKQIASGRFGVTPEYLVNAKQLEIKIAQGAKPGEGGQLPGKKVSPYIAELRN 1014 Score = 55.1 bits (131), Expect(2) = 5e-44 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDLAQLI DL Sbjct: 1016 KPGVTLISPPPHHDIYSIEDLAQLIFDL 1043
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 142 bits (357), Expect(2) = 2e-43 Identities = 79/167 (47%), Positives = 103/167 (61%), Gaps = 16/167 (9%) Frame = +2 Query: 83 YKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAH 262 Y Y + +Q LR +LK + I++D+VE I+ +FCTG MS G++S E H Sbjct: 852 YNSYQRLLQNRPPTA-LRDLLKLKSNKQPIAIDKVESMENILHKFCTGGMSLGALSRETH 910 Query: 263 TALAVAMNKLGGKSNTGEGGEQPSRMEPLSD--------------GSMN--PKRSAIKQV 394 LA+AMN++GGKSN+GEGGE P R + L+D G N SAIKQ+ Sbjct: 911 ETLAIAMNRIGGKSNSGEGGEDPVRFKVLNDVNESGNSDLLPHLKGLRNGDTASSAIKQI 970 Query: 395 ASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTR 535 ASGRFGV+ YL NA +L+IK+AQGAKPGEGG+LPG K+ IA R Sbjct: 971 ASGRFGVTPEYLMNAKQLEIKIAQGAKPGEGGQLPGKKISPYIATLR 1017 Score = 53.9 bits (128), Expect(2) = 2e-43 Identities = 24/28 (85%), Positives = 26/28 (92%) Frame = +3 Query: 543 QPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +PGV LISPPPHHDIYSIEDL+QLI DL Sbjct: 1020 KPGVPLISPPPHHDIYSIEDLSQLIFDL 1047
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 145 bits (367), Expect = 7e-35 Identities = 80/159 (50%), Positives = 108/159 (67%) Frame = +2 Query: 68 NSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSI 247 +S +K+YS+++ + LR +L+ + + + +DEVE + I KRF T MS G++ Sbjct: 841 DSYTTFKKYSEQVNK-RPPMQLRDLLELRSTKAPVPVDEVESITAIRKRFITPGMSMGAL 899 Query: 248 SLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYY 427 S EAH L VAMN++G KS++GEGGE P+R P +G + SAIKQVASGRFGV++ Y Sbjct: 900 SPEAHGTLNVAMNRIGAKSDSGEGGEDPARFRPDKNG--DNWNSAIKQVASGRFGVTAEY 957 Query: 428 LTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRHST 544 L EL+IK+AQGAKPGEGG+LPG KV IA RHST Sbjct: 958 LNQCRELEIKVAQGAKPGEGGQLPGFKVTEMIARLRHST 996 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +3 Query: 495 FQVTRLSVTLQLPDILQPGVGLISPPPHHDIYSIEDLAQLIHDL 626 F+VT + L+ PGV LISPPPHHDIYSIEDLAQLI+DL Sbjct: 983 FKVTEMIARLRHST---PGVMLISPPPHHDIYSIEDLAQLIYDL 1023
>GLUS_METJA (Q58746) Glutamate synthase (EC 1.4.1.13)| Length = 510 Score = 88.6 bits (218), Expect(2) = 9e-25 Identities = 49/102 (48%), Positives = 62/102 (60%) Frame = +2 Query: 230 MSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRF 409 MSYG++SL AH + A A+ + G TGEGG P + P +D I QVASGRF Sbjct: 183 MSYGALSLNAHLSFAKAVKECGTFMGTGEGG-LPKALYPYAD-------HIITQVASGRF 234 Query: 410 GVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTR 535 GV+ YL ++IK+ QGAKPG GG LPG KV +I+ TR Sbjct: 235 GVNEEYLMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATR 276 Score = 44.7 bits (104), Expect(2) = 9e-25 Identities = 22/39 (56%), Positives = 26/39 (66%) Frame = +3 Query: 510 LSVTLQLPDILQPGVGLISPPPHHDIYSIEDLAQLIHDL 626 +S T +P+ G ISP PHHDIYSIEDLAQL+ L Sbjct: 272 ISATRMIPE----GSDAISPAPHHDIYSIEDLAQLVRSL 306
>GLXD_RHIME (O87392) Glutamate synthase large subunit-like protein| Length = 442 Score = 54.7 bits (130), Expect = 2e-07 Identities = 32/103 (31%), Positives = 52/103 (50%) Frame = +2 Query: 230 MSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRF 409 MS+G++S A AL G + TG+GG ++D ++ + Q R+ Sbjct: 95 MSFGALSGPAKEALGRGATASGTSTTTGDGG--------MTDEERGHSQTLVYQYLPSRY 146 Query: 410 GVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDIAVTRH 538 G++ L AD +++ + QGAKPG GG L G K+ +A R+ Sbjct: 147 GMNPKDLRRADAIEVVVGQGAKPGGGGMLLGQKISDRVANMRN 189
>TIP_ANTMA (P33560) Probable aquaporin TIP-type (Tonoplast intrinsic protein| DiP) (Dark intrinsic protein) Length = 250 Score = 33.9 bits (76), Expect = 0.40 Identities = 25/66 (37%), Positives = 30/66 (45%) Frame = +2 Query: 344 PLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGELPGHKVIGDI 523 P S GSMNP RS VASG F + Y A P GG L G + GD+ Sbjct: 190 PFSGGSMNPARSFGPAVASGDFSQNWIY-------------WAGPLIGGALAGF-IYGDV 235 Query: 524 AVTRHS 541 +T H+ Sbjct: 236 FITAHA 241
>RPOC_STRMU (Q8DS47) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1209 Score = 31.6 bits (70), Expect = 2.0 Identities = 33/140 (23%), Positives = 62/140 (44%) Frame = +2 Query: 65 VNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGS 244 V S A + RIQE+ +A N +G + +++ E + A+ K + GA G Sbjct: 945 VASNADITQGLPRIQEIFEARNPKGEAVITEVKGQVTDIEEDAATRTKKVYVKGATGEGE 1004 Query: 245 ISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSY 424 ++ + V + G++ R PL++GS+ PK + +V V +Y Sbjct: 1005 YTVPFTARMKVQV------------GDEVHRGAPLTEGSIQPKH--LLEVRD-TLSVETY 1049 Query: 425 YLTNADELQIKMAQGAKPGE 484 L A+ ++ +QG + G+ Sbjct: 1050 LL--AEVQKVYRSQGVEIGD 1067
>GON4L_MOUSE (Q9DB00) GON-4-like protein (GON-4 homolog)| Length = 2260 Score = 31.6 bits (70), Expect = 2.0 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = +2 Query: 68 NSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLD 181 NS A +++++ R Q L + CN G ++ I+ +++S+D Sbjct: 745 NSIALHQQFNPRFQTLFQPCNWMGAMRLIEDFTQVSID 782
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 31.2 bits (69), Expect = 2.6 Identities = 21/65 (32%), Positives = 31/65 (47%) Frame = +2 Query: 314 EGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKMAQGAKPGEGGE 493 E G P R +PL+ S + RS + SG G+S ++ + + M GA+PG G Sbjct: 226 ESGAVPKRKDPLTHASNSLPRSKTV-LKSGSAGLSGHHRAPSCS-GLSMVSGARPGPGPA 283 Query: 494 LPGHK 508 HK Sbjct: 284 ATTHK 288
>GON4L_RAT (Q535K8) GON-4-like protein (Protein GON4) (GON-4 homolog)| Length = 2256 Score = 30.8 bits (68), Expect = 3.4 Identities = 13/38 (34%), Positives = 24/38 (63%) Frame = +2 Query: 68 NSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLD 181 NS A +++++ R Q L + CN G ++ I+ + IS+D Sbjct: 744 NSTALHQQFNPRFQTLFQPCNWVGAMQLIEDFTHISID 781
>DMD_CHICK (P11533) Dystrophin| Length = 3660 Score = 30.8 bits (68), Expect = 3.4 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 1/119 (0%) Frame = +2 Query: 35 QWQN-CKXAAKVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVK 211 +WQ C+ V R +E + E + +L ++ +++ T + +EP +E Sbjct: 2194 RWQEICRQL--VEKRKRIEEEKNILSEFQE--DLNKLILWLEETENVIAIPLEPGNEDQL 2249 Query: 212 RFCTGAMSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIK 388 R C G + L H + +N+ GG + G P R L R +K Sbjct: 2250 RDCLGKVKLRVEELLPHKGILKRLNETGG-TTLGSASLNPERKHKLESTLKEASRRLLK 2307
>RPOC_STRR6 (Q8DNF1) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1225 Score = 30.0 bits (66), Expect = 5.8 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%) Frame = +2 Query: 101 RIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVA 280 R+QE+ +A N +G + +++ E + ++ K F G G + + V Sbjct: 956 RVQEIFEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRV- 1014 Query: 281 MNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKR-SAIKQVASGRFGVSSYYLTNADELQIK 457 E G Q +R L++GS+ PKR A++ V S V +Y L + ++ Sbjct: 1015 -----------EVGGQVARGAALTEGSIQPKRLLAVRDVLS----VETYLL--GEVQKVY 1057 Query: 458 MAQGAKPGE 484 +QG + G+ Sbjct: 1058 RSQGVEIGD 1066
>RPOC_STRPN (Q97NQ8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1225 Score = 30.0 bits (66), Expect = 5.8 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%) Frame = +2 Query: 101 RIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVA 280 R+QE+ +A N +G + +++ E + ++ K F G G + + V Sbjct: 956 RVQEIFEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRV- 1014 Query: 281 MNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKR-SAIKQVASGRFGVSSYYLTNADELQIK 457 E G Q +R L++GS+ PKR A++ V S V +Y L + ++ Sbjct: 1015 -----------EVGGQVARGAALTEGSIQPKRLLAVRDVLS----VETYLL--GEVQKVY 1057 Query: 458 MAQGAKPGE 484 +QG + G+ Sbjct: 1058 RSQGVEIGD 1066
>RPOC_STRT2 (Q5M2F6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1212 Score = 29.6 bits (65), Expect = 7.6 Identities = 32/128 (25%), Positives = 55/128 (42%) Frame = +2 Query: 101 RIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVA 280 RIQE+ +A N +G + + E + A+ K F G G + + V Sbjct: 957 RIQEIFEARNPKGEAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKV- 1015 Query: 281 MNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKM 460 E G++ R E L++GS+ PKR + +V V +Y L A+ ++ Sbjct: 1016 -----------EVGDEVHRGEALTEGSIQPKR--LLEVRD-TLSVETYLL--AEVQKVYR 1059 Query: 461 AQGAKPGE 484 +QG + G+ Sbjct: 1060 SQGVEIGD 1067
>RPOC_STRT1 (Q5LXV4) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1212 Score = 29.6 bits (65), Expect = 7.6 Identities = 32/128 (25%), Positives = 55/128 (42%) Frame = +2 Query: 101 RIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVA 280 RIQE+ +A N +G + + E + A+ K F G G + + V Sbjct: 957 RIQEIFEARNPKGEAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKV- 1015 Query: 281 MNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIKM 460 E G++ R E L++GS+ PKR + +V V +Y L A+ ++ Sbjct: 1016 -----------EVGDEVHRGEALTEGSIQPKR--LLEVRD-TLSVETYLL--AEVQKVYR 1059 Query: 461 AQGAKPGE 484 +QG + G+ Sbjct: 1060 SQGVEIGD 1067
>NPD_LEPIN (Q8F3Z6) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 246 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 470 HPEPFLSAAH---LH*SDNSWKLQIVHWQLA*LHFVLDSSTHQKEVPSEKAAPLPPLC*I 300 HP+ FL + LH S KL +H + ++ + KE SE PLPP C Sbjct: 90 HPDFFLITQNVDGLHSQAGSKKLTEIHGNIF-INRCISCGQESKETISENTTPLPPQCQN 148 Query: 299 C 297 C Sbjct: 149 C 149
>NPD_LEPIC (Q72RR0) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 246 Score = 29.6 bits (65), Expect = 7.6 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Frame = -1 Query: 470 HPEPFLSAAH---LH*SDNSWKLQIVHWQLA*LHFVLDSSTHQKEVPSEKAAPLPPLC*I 300 HP+ FL + LH S KL +H + ++ + KE SE PLPP C Sbjct: 90 HPDFFLITQNVDGLHSQAGSKKLTEIHGNIF-INRCISCGQESKETISENTTPLPPQCQN 148 Query: 299 C 297 C Sbjct: 149 C 149
>RNR2_LACLA (Q02146) Ribonuclease R 2 (EC 3.1.-.-) (RNase R 2) (VacB protein| homolog 2) Length = 665 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 134 RGMLKFIDSTSKISLDEVEPASEIVKR 214 RGM++F +S +KI LDE EIVKR Sbjct: 370 RGMIEFDESEAKIILDEKGHPIEIVKR 396
>RPOC_PEDAC (P77917) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) (Fragment) Length = 1055 Score = 29.3 bits (64), Expect = 10.0 Identities = 24/92 (26%), Positives = 40/92 (43%) Frame = +2 Query: 101 RIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHTALAVA 280 RIQE+ +A N +G + + T + E +PA + G + SL + VA Sbjct: 956 RIQEIVEARNPKGPAEISEVTGVVESIEEDPAEGTKEVTVKGETDSRTYSLPITARMKVA 1015 Query: 281 MNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKR 376 G+ R PL++GS++PK+ Sbjct: 1016 ------------EGDYIHRGAPLNEGSIDPKK 1035
>SYI_TREPA (O83466) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1091 Score = 29.3 bits (64), Expect = 10.0 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Frame = +2 Query: 116 NKACNLRGMLKFIDS--TSKISLDEVEPASEIVKRFCTGAMSYGSISLEAHT 265 N NL G D T + V P S + FC A S+GS SL AHT Sbjct: 191 NHELNLGGYQDVSDPAITVRFECTSVVPGSPAAREFCAAA-SWGSASLPAHT 241
>PRSA_CLOTE (Q899I2) Foldase protein prsA precursor (EC 5.2.1.8)| Length = 339 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%) Frame = +2 Query: 299 KSNTGEGGEQP--SRMEPLSDGSMNPKRSAIKQVASGRFGVSSYYLTNADELQIK 457 K N+G+ G+ P S ++P +D + + I Q +FG L + DE+ K Sbjct: 240 KENSGDLGKAPYSSMVKPFADAIVKLNKGEISQPVKSQFGYHVIKLIDKDEVTFK 294
>CBIH_METJA (Q58223) Probable cobalt-precorrin-3B C(17)-methyltransferase (EC| 2.1.1.-) (Cobalt-precorrin-3 methyltransferase) (Cobalt-precorrin-3 methylase) Length = 249 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/79 (26%), Positives = 34/79 (43%) Frame = +2 Query: 62 KVNSRAAYKEYSKRIQELNKACNLRGMLKFIDSTSKISLDEVEPASEIVKRFCTGAMSYG 241 KV+ YK Y K ++ LNK GM + +D V+ A + K +S G Sbjct: 25 KVDLIVCYKNYKKFVERLNKPIYTTGMTR--------EIDRVDYALKEAKDKDVALVSSG 76 Query: 242 SISLEAHTALAVAMNKLGG 298 ++ +LA +N + G Sbjct: 77 DATIYGLASLAYEINAVKG 95
>ASPQ_PSEAE (Q9I407) Glutaminase-asparaginase precursor (EC 3.5.1.38)| (L-asparagine/L-glutamine amidohydrolase) (L-ASNase/L-GLNase) Length = 362 Score = 29.3 bits (64), Expect = 10.0 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +2 Query: 227 AMSYGSISLEAHTALAVAMNKLGGKSNTGEGGEQPSRMEPLSDGSMNPKRSAIKQVASGR 406 A SYG++S A+ ALA A K + TG G P+R+ P ++ ++ + S Sbjct: 252 AYSYGNVSDTAYKALAQAGAKAIIHAGTG-NGSVPARVVPT---LQELRKQGVQIIRSSH 307 Query: 407 FGVSSYYLTNADE 445 + L NA++ Sbjct: 308 VNAGGFVLRNAEQ 320 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,502,500 Number of Sequences: 219361 Number of extensions: 1848746 Number of successful extensions: 4994 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4728 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4973 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
