ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1l19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009194.1| Triticum aestivum clone wle1.pk0002.c10:fis, full... 196 6e-47
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
3dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
4dbj|AK064540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 139 1e-29
5emb|CR859874.1| Pongo pygmaeus mRNA; cDNA DKFZp469A074 (from clo... 46 0.14
6emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, ... 44 0.55
7emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, B... 44 0.55
8gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G... 44 0.55
9gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4 44 0.55
10gb|AC150544.3| Bos taurus BAC CH240-75C8 (Children's Hospital O... 42 2.2
11gb|AF125443.1| Caenorhabditis elegans fosmid H32C10, complete se... 42 2.2
12emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, ... 42 2.2
13emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, B... 42 2.2
14gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC ... 42 2.2
15gb|AY814847.1| Schistosoma japonicum SJCHGC06284 protein mRNA, c... 40 8.7
16gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete se... 40 8.7
17emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in... 40 8.7
18gb|AC124685.5| Mus musculus BAC clone RP24-385O22 from chromosom... 40 8.7
19emb|AL513131.1| Human DNA sequence from clone RP11-210H10 on chr... 40 8.7
20gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cance... 40 8.7
21emb|AL845338.4| Mouse DNA sequence from clone RP24-480C2 on chro... 40 8.7
22gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cance... 40 8.7
23dbj|AK094033.1| Homo sapiens cDNA FLJ36714 fis, clone UTERU2010320 40 8.7
24gb|AC007120.6| Arabidopsis thaliana chromosome 2 clone T15D9 map... 40 8.7
25gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, com... 40 8.7
26gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, c... 40 8.7
27gb|AC025447.5| Homo sapiens chromosome 5 clone CTD-2085H24, comp... 40 8.7
28ref|NG_004124.1| Homo sapiens olfactory receptor, family 5, subf... 40 8.7
29gb|AC093776.3| Homo sapiens BAC clone RP11-145G20 from 4, comple... 40 8.7
30gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J... 40 8.7
31gb|AC098824.3| Homo sapiens BAC clone RP11-489G24 from 2, comple... 40 8.7
32gb|AC004706.1|AC004706 Homo sapiens chromosome 17, clone hCIT.28... 40 8.7
33emb|AL928838.8| Zebrafish DNA sequence from clone CH211-148F13, ... 40 8.7
34emb|AJ336626.1|HSA336626 Homo sapiens genomic sequence surroundi... 40 8.7
35emb|AJ334903.1|HSA334903 Homo sapiens genomic sequence surroundi... 40 8.7
36emb|AJ322888.1|HSA322888 Homo sapiens genomic sequence surroundi... 40 8.7
37gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 8.7
38emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in... 40 8.7
39emb|AL772313.12| Mouse DNA sequence from clone RP23-128J10 on ch... 40 8.7
40emb|AL935327.12| Mouse DNA sequence from clone RP23-259I23 on ch... 40 8.7
41dbj|AP001952.3| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 8.7 
>gb|BT009194.1| Triticum aestivum clone wle1.pk0002.c10:fis, full insert mRNA
           sequence
          Length = 1291

 Score =  196 bits (99), Expect = 6e-47
 Identities = 123/131 (93%)
 Strand = Plus / Plus

                                                                       
Query: 505 aaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaagggttgtac 564
           ||||||||||||||||| | | |||| ||| |||||||||||||||||||||||||||||
Sbjct: 281 aaatggcgtcaggatttccgcttgtcagaactatcagaagaatcagtgaaagggttgtac 340

                                                                       
Query: 565 caaactggcaaggcatatgtgcatgattcttttgacatcaacggcaggcctgtgctaata 624
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 341 caaactggcaaggcatatgtgcatgattcttttgacatcaacggcaggcctgtgttagta 400

                      
Query: 625 gtagtcgcagc 635
           ||||| |||||
Sbjct: 401 gtagtggcagc 411
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  151 bits (76), Expect = 3e-33
 Identities = 115/128 (89%)
 Strand = Plus / Plus

                                                                            
Query: 499      cattagaaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaaggg 558
                |||||||||||||| ||||||||||| || || ||||||||||||||||| || ||||||
Sbjct: 12846948 cattagaaatggcgccaggattttcaagtctcagaattatcagaagaatcggttaaaggg 12847007

                                                                            
Query: 559      ttgtaccaaactggcaaggcatatgtgcatgattcttttgacatcaacggcaggcctgtg 618
                ||||| ||||||||||| ||||||||||||||||||||||||||| | || || ||||||
Sbjct: 12847008 ttgtatcaaactggcaaagcatatgtgcatgattcttttgacatctatggtagacctgtg 12847067

                        
Query: 619      ctaatagt 626
                ||| ||||
Sbjct: 12847068 ctagtagt 12847075
to top
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0073A18
          Length = 176755

 Score =  151 bits (76), Expect = 3e-33
 Identities = 115/128 (89%)
 Strand = Plus / Plus

                                                                         
Query: 499   cattagaaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaaggg 558
             |||||||||||||| ||||||||||| || || ||||||||||||||||| || ||||||
Sbjct: 66430 cattagaaatggcgccaggattttcaagtctcagaattatcagaagaatcggttaaaggg 66489

                                                                         
Query: 559   ttgtaccaaactggcaaggcatatgtgcatgattcttttgacatcaacggcaggcctgtg 618
             ||||| ||||||||||| ||||||||||||||||||||||||||| | || || ||||||
Sbjct: 66490 ttgtatcaaactggcaaagcatatgtgcatgattcttttgacatctatggtagacctgtg 66549

                     
Query: 619   ctaatagt 626
             ||| ||||
Sbjct: 66550 ctagtagt 66557
to top
>dbj|AK064540.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-A04, full
           insert sequence
          Length = 1587

 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/122 (89%)
 Strand = Plus / Plus

                                                                       
Query: 505 aaatggcgtcaggattttcacgtgtcggaattatcagaagaatcagtgaaagggttgtac 564
           |||||||| ||||||||||| || || ||||||||||||||||| || ||||||||||| 
Sbjct: 697 aaatggcgccaggattttcaagtctcagaattatcagaagaatcggttaaagggttgtat 756

                                                                       
Query: 565 caaactggcaaggcatatgtgcatgattcttttgacatcaacggcaggcctgtgctaata 624
           ||||||||||| ||||||||||||||||||||||||||| | || || ||||||||| ||
Sbjct: 757 caaactggcaaagcatatgtgcatgattcttttgacatctatggtagacctgtgctagta 816

             
Query: 625 gt 626
           ||
Sbjct: 817 gt 818
to top
>emb|CR859874.1| Pongo pygmaeus mRNA; cDNA DKFZp469A074 (from clone DKFZp469A074)
          Length = 4834

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 444  aatcaatgtgaataatagttttt 466
            |||||||||||||||||||||||
Sbjct: 4686 aatcaatgtgaataatagttttt 4708
to top
>emb|AL161516.2|ATCHRIV28 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 28
          Length = 198005

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 434    ttaaattagtaatcaatgtgaataat 459
              ||||||||| ||||||||||||||||
Sbjct: 177733 ttaaattagaaatcaatgtgaataat 177758
to top
>emb|AL049487.1|ATF28M11 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M11 (ESSA project)
          Length = 85907

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 434   ttaaattagtaatcaatgtgaataat 459
             ||||||||| ||||||||||||||||
Sbjct: 79372 ttaaattagaaatcaatgtgaataat 79397
to top
>gb|AC012099.4|AC012099 Homo sapiens chromosome 14 clone RP11-45G3 containing neurexin III gene,
              partial cds, complete sequence
          Length = 157871

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 365    ctaaagatgatgtgccttttgtcatg 390
              ||||| ||||||||||||||||||||
Sbjct: 118171 ctaaacatgatgtgccttttgtcatg 118196
to top
>gb|AF096373.1|T9A4 Arabidopsis thaliana BAC T9A4
          Length = 83922

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 434   ttaaattagtaatcaatgtgaataat 459
             ||||||||| ||||||||||||||||
Sbjct: 48879 ttaaattagaaatcaatgtgaataat 48854
to top
>gb|AC150544.3| Bos taurus  BAC CH240-75C8 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 190186

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    cagcaaaattataaatataaa 138
              |||||||||||||||||||||
Sbjct: 155395 cagcaaaattataaatataaa 155415
to top
>gb|AF125443.1| Caenorhabditis elegans fosmid H32C10, complete sequence
          Length = 34869

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 380  cttttgtcatgttctctgctttgtagtttcatg 412
            ||||||||||||| |||| |||||| |||||||
Sbjct: 8997 cttttgtcatgttttctgttttgtattttcatg 9029
to top
>emb|AL161560.2|ATCHRIV60 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 60
          Length = 196677

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 125    attataaatataaagtactcc 145
              |||||||||||||||||||||
Sbjct: 126694 attataaatataaagtactcc 126674
to top
>emb|AL078468.1|ATT32A16 Arabidopsis thaliana DNA chromosome 4, BAC clone T32A16 (ESSA project)
          Length = 89826

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   attataaatataaagtactcc 145
             |||||||||||||||||||||
Sbjct: 76788 attataaatataaagtactcc 76768
to top
>gb|AC002343.1|ATAC002343 Arabidopsis thaliana chromosome IV BAC T19F6 genomic sequence, complete
             sequence
          Length = 116156

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 125   attataaatataaagtactcc 145
             |||||||||||||||||||||
Sbjct: 85917 attataaatataaagtactcc 85937
to top
>gb|AY814847.1| Schistosoma japonicum SJCHGC06284 protein mRNA, complete cds
          Length = 889

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 358 gatttttctaaagatgatgt 377
           ||||||||||||||||||||
Sbjct: 818 gatttttctaaagatgatgt 837
to top
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence
          Length = 170350

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   agcaaaattataaatataaa 138
             ||||||||||||||||||||
Sbjct: 89239 agcaaaattataaatataaa 89258
to top
>emb|AL954324.10| Zebrafish DNA sequence from clone DKEY-35P13 in linkage group 17,
             complete sequence
          Length = 69320

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   tttgaccgattgcacaatgt 292
             ||||||||||||||||||||
Sbjct: 34079 tttgaccgattgcacaatgt 34098
to top
>gb|AC124685.5| Mus musculus BAC clone RP24-385O22 from chromosome 2, complete sequence
          Length = 174583

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    aaaattataaatataaagta 141
              ||||||||||||||||||||
Sbjct: 132670 aaaattataaatataaagta 132651
to top
>emb|AL513131.1| Human DNA sequence from clone RP11-210H10 on chromosome 6 Contains a
             HSPC030 protein pseudogene and a novel gene, complete
             sequence
          Length = 108171

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ttttgcttgttactgttaga 90
             ||||||||||||||||||||
Sbjct: 87216 ttttgcttgttactgttaga 87197
to top
>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 160421

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ctgcagcaaaattataaata 134
             ||||||||||||||||||||
Sbjct: 96215 ctgcagcaaaattataaata 96196
to top
>emb|AL845338.4| Mouse DNA sequence from clone RP24-480C2 on chromosome 4, complete
              sequence
          Length = 172305

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    ttttgtcatgttctctgctt 400
              ||||||||||||||||||||
Sbjct: 154211 ttttgtcatgttctctgctt 154192
to top
>gb|AC092924.7| Homo sapiens 3 BAC RP11-788A4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155417

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 535   ttatcagaagaatcagtgaaaggg 558
             |||||||||||||||| |||||||
Sbjct: 59855 ttatcagaagaatcagagaaaggg 59878
to top
>dbj|AK094033.1| Homo sapiens cDNA FLJ36714 fis, clone UTERU2010320
          Length = 2350

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 320 ccctgattaaaaggagtaag 339
           ||||||||||||||||||||
Sbjct: 974 ccctgattaaaaggagtaag 955
to top
>gb|AC007120.6| Arabidopsis thaliana chromosome 2 clone T15D9 map mi421, complete
             sequence
          Length = 102331

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   aaatataaagtactccaagg 149
             ||||||||||||||||||||
Sbjct: 66116 aaatataaagtactccaagg 66097
to top
>gb|AC044810.7| Homo sapiens chromosome 11, clone RP11-494M8, complete sequence
          Length = 194297

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   tgccttttgtcatgttctct 396
             ||||||||||||||||||||
Sbjct: 69580 tgccttttgtcatgttctct 69561
to top
>gb|AC021427.10| Homo sapiens chromosome 11, clone RP11-399N15, complete sequence
          Length = 174147

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    tgccttttgtcatgttctct 396
              ||||||||||||||||||||
Sbjct: 131632 tgccttttgtcatgttctct 131613
to top
>gb|AC025447.5| Homo sapiens chromosome 5 clone CTD-2085H24, complete sequence
          Length = 117543

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 486    tttccttcatctgcattaga 505
              ||||||||||||||||||||
Sbjct: 105431 tttccttcatctgcattaga 105450
to top
>ref|NG_004124.1| Homo sapiens olfactory receptor, family 5, subfamily E, member 1
           pseudogene (OR5E1P) on chromosome 11
          Length = 1133

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 tgccttttgtcatgttctct 396
           ||||||||||||||||||||
Sbjct: 113 tgccttttgtcatgttctct 94
to top
>gb|AC093776.3| Homo sapiens BAC clone RP11-145G20 from 4, complete sequence
          Length = 159937

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   aatgtgaataatagtttttc 467
             ||||||||||||||||||||
Sbjct: 53624 aatgtgaataatagtttttc 53605
to top
>gb|AC010368.4|AC010368 Homo sapiens chromosome 5 clone CTD-2046J7, complete sequence
          Length = 149307

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   tttccttcatctgcattaga 505
             ||||||||||||||||||||
Sbjct: 53473 tttccttcatctgcattaga 53454
to top
>gb|AC098824.3| Homo sapiens BAC clone RP11-489G24 from 2, complete sequence
          Length = 157758

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     actgttagagtctctcacac 101
              ||||||||||||||||||||
Sbjct: 101119 actgttagagtctctcacac 101100
to top
>gb|AC004706.1|AC004706 Homo sapiens chromosome 17, clone hCIT.281_F_24, complete sequence
          Length = 125638

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 320   ccctgattaaaaggagtaag 339
             ||||||||||||||||||||
Sbjct: 26308 ccctgattaaaaggagtaag 26327
to top
>emb|AL928838.8| Zebrafish DNA sequence from clone CH211-148F13, complete sequence
          Length = 167563

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 457   aatagtttttcgtattttgcgacttaagcttt 488
             ||||||||||||||||||| || ||| |||||
Sbjct: 21129 aatagtttttcgtattttgtgatttacgcttt 21098
to top
>emb|AJ336626.1|HSA336626 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-OG23R
          Length = 791

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  actgttagagtctctcacac 101
           ||||||||||||||||||||
Sbjct: 194 actgttagagtctctcacac 175
to top
>emb|AJ334903.1|HSA334903 Homo sapiens genomic sequence surrounding NotI site, clone NB6-224R
          Length = 452

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  actgttagagtctctcacac 101
           ||||||||||||||||||||
Sbjct: 195 actgttagagtctctcacac 176
to top
>emb|AJ322888.1|HSA322888 Homo sapiens genomic sequence surrounding NotI site, clone NR1-OL5R
          Length = 813

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  actgttagagtctctcacac 101
           ||||||||||||||||||||
Sbjct: 196 actgttagagtctctcacac 177
to top
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 122     aaaattataaatataaagta 141
               ||||||||||||||||||||
Sbjct: 2347835 aaaattataaatataaagta 2347816
to top
>emb|BX088719.6| Zebrafish DNA sequence from clone CH211-207H2 in linkage group 17,
             complete sequence
          Length = 205685

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tttttctaaagatgatgtgc 379
             ||||||||||||||||||||
Sbjct: 23590 tttttctaaagatgatgtgc 23571
to top
>emb|AL772313.12| Mouse DNA sequence from clone RP23-128J10 on chromosome 2, complete
             sequence
          Length = 176872

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   aaaattataaatataaagta 141
             ||||||||||||||||||||
Sbjct: 61430 aaaattataaatataaagta 61411
to top
>emb|AL935327.12| Mouse DNA sequence from clone RP23-259I23 on chromosome 2, complete
             sequence
          Length = 127391

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 387   catgttctctgctttgtagt 406
             ||||||||||||||||||||
Sbjct: 51925 catgttctctgctttgtagt 51944
to top
>dbj|AP001952.3| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:243A12, complete
             sequence
          Length = 123593

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 448   aatgtgaataatagtttttc 467
             ||||||||||||||||||||
Sbjct: 65885 aatgtgaataatagtttttc 65866


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,628,084
Number of Sequences: 3902068
Number of extensions: 6628084
Number of successful extensions: 132471
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 132265
Number of HSP's gapped (non-prelim): 206
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top