ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1l14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1UPPS_HALSA (Q9HP68) Undecaprenyl pyrophosphate synthetase (EC 2.... 30 4.3
2ATS18_HUMAN (Q8TE60) ADAMTS-18 precursor (EC 3.4.24.-) (A disint... 30 5.6
3GER3_WHEAT (P26759) Oxalate oxidase GF-3.8 precursor (EC 1.2.3.4... 29 7.4
4GER2_WHEAT (P15290) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4... 29 7.4
5VE6_MMPV (P30734) Protein E6 29 9.6
6OXO2_HORVU (P45851) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Ge... 29 9.6

>UPPS_HALSA (Q9HP68) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 302

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 21/81 (25%), Positives = 34/81 (41%)
 Frame = -1

Query: 361 LQVGRQACLFHAVRDVGDNTGASVVKPLILNMHVVVSRVRPQ*CMEVDIYFLPTHSLQTT 182
           L  G +  L  A R V D   A  + P  ++   + SR+      +VD+        +T+
Sbjct: 152 LAYGGRDELLTAARGVADAVAAGDLDPADIDAQAIESRLHTSPVRDVDLIIRTGGDERTS 211

Query: 181 NHLLFHHXGDIHWYFPCSVYF 119
           N L +H  G     F C+ Y+
Sbjct: 212 NFLPWHANGSEAAVFFCTPYW 232



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>ATS18_HUMAN (Q8TE60) ADAMTS-18 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 18) (ADAM-TS
            18) (ADAM-TS18)
          Length = 1221

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +3

Query: 291  TLAPVLSPTSRTA*NRHACLPTCKI--WTWCAGIC 389
            +L PV +PT   A N HAC P   +  W+ C+  C
Sbjct: 973  SLCPVSTPTQVQACNSHACPPQWSLGPWSQCSKTC 1007



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>GER3_WHEAT (P26759) Oxalate oxidase GF-3.8 precursor (EC 1.2.3.4) (Germin|
           GF-3.8)
          Length = 224

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +1

Query: 16  LDGYKYIVNVEYCSPVSSDGPHFPSRAARAKEAAQSTPN 132
           LDG    VN   C P+S  G  F   +  AK    STPN
Sbjct: 37  LDGKAVSVNGHMCKPMSEAGDDFLFSSKLAKAGNTSTPN 75



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>GER2_WHEAT (P15290) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4) (Germin|
           GF-2.8)
          Length = 224

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +1

Query: 16  LDGYKYIVNVEYCSPVSSDGPHFPSRAARAKEAAQSTPNMENTNEYHQXDGRGDDS 183
           LDG    VN   C P+S  G  F   +  AK    STPN     E    +  G ++
Sbjct: 37  LDGKAVSVNGHTCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNT 92



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>VE6_MMPV (P30734) Protein E6|
          Length = 153

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 379 LAYATVSTLYQRTSELTSFPPEQHRGFTSIRSCRKP*IDC 498
           LA  T S       EL +F   +H   TS R+CR P I+C
Sbjct: 114 LALLTASEKLDAKCELQTFILVRHMWRTSCRACRTPAIEC 153



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>OXO2_HORVU (P45851) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin)|
          Length = 224

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +1

Query: 16  LDGYKYIVNVEYCSPVSSDGPHFPSRAARAKEAAQSTPNMENTNEYHQXDGRGDDS 183
           LDG    VN   C P+S  G  F   +  AK    STPN     E    +  G ++
Sbjct: 37  LDGKAVSVNGHPCKPMSEAGDDFLFSSKLAKAGNTSTPNGSAVTELDVAEWPGTNT 92


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,018,076
Number of Sequences: 219361
Number of extensions: 1695736
Number of successful extensions: 4336
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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