ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal2a12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK111893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071N16, full insert sequence Length = 3237 Score = 206 bits (104), Expect = 5e-50 Identities = 245/292 (83%) Strand = Plus / Plus Query: 246 agaggtttagggggaggtatgagatactactcgcgtcaggtccagcgtttggctggagac 305 |||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 646 agaggtctaggaggaggtatgaggtactacttgcgtcaggtccagcgtttggttggagat 705 Query: 306 acagaaggaggagtgctgttgtttgtagacgccctcaactccaagtaacaaagcgaccag 365 | |||||||||||||| |||||||| || | ||||||||| || | |||||||||||| Sbjct: 706 atggaaggaggagtgcttttgtttgtggaagacctcaactctaactgacaaagcgaccaa 765 Query: 366 ttgtcagcacttccttttgttttcgcatttccctggaattggagatggagataaattctt 425 ||| || |||||| || |||| ||| || ||||||| |||||||| ||||| | Sbjct: 766 ttgccaacacttctgttatatttcttctttttcttgaattgggaatggagattaattcct 825 Query: 426 cgggtgaggaaacggtgataaaggtgcgaaagccgtacacaataacaaaacagcgggagc 485 | ||||||||| ||||| |||||||| | ||||| |||||||| ||||| ||| |||||| Sbjct: 826 ctggtgaggaagcggtggtaaaggtgaggaagccatacacaatcacaaagcagagggagc 885 Query: 486 ggtggactgaggcagagcacaaacggttccttgaagccctcaaactgtatgg 537 | |||||||||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 886 gttggactgaggcagagcacaacaggttccttgaagccttgaaactgtatgg 937
>gb|AY452478.1| Oryza sativa (japonica cultivar-group) circadian oscillator component (COC1) mRNA, complete cds Length = 2608 Score = 198 bits (100), Expect = 1e-47 Identities = 244/292 (83%) Strand = Plus / Plus Query: 246 agaggtttagggggaggtatgagatactactcgcgtcaggtccagcgtttggctggagac 305 |||||| |||| ||||||||||| ||||||| | |||||||||||||||||| |||||| Sbjct: 101 agaggtctaggaggaggtatgaggtactacttgtgtcaggtccagcgtttggttggagat 160 Query: 306 acagaaggaggagtgctgttgtttgtagacgccctcaactccaagtaacaaagcgaccag 365 | |||||||||||||| |||||||| || | ||||||||| || | |||||||||||| Sbjct: 161 atggaaggaggagtgcttttgtttgtggaagacctcaactctaactgacaaagcgaccaa 220 Query: 366 ttgtcagcacttccttttgttttcgcatttccctggaattggagatggagataaattctt 425 ||| || |||||| || |||| ||| || ||||||| |||||||| ||||| | Sbjct: 221 ttgccaacacttctgttatatttcttctttttcttgaattgggaatggagattaattcct 280 Query: 426 cgggtgaggaaacggtgataaaggtgcgaaagccgtacacaataacaaaacagcgggagc 485 | ||||||||| ||||| |||||||| | ||||| |||||||| ||||| ||| |||||| Sbjct: 281 ctggtgaggaagcggtggtaaaggtgaggaagccatacacaatcacaaagcagagggagc 340 Query: 486 ggtggactgaggcagagcacaaacggttccttgaagccctcaaactgtatgg 537 | |||||||||||||||||||| |||||||||||||| | ||||||||||| Sbjct: 341 gttggactgaggcagagcacaacaggttccttgaagccttgaaactgtatgg 392
>gb|AY103618.1| Zea mays PCO118792 mRNA sequence Length = 1466 Score = 133 bits (67), Expect = 7e-28 Identities = 118/135 (87%) Strand = Plus / Plus Query: 404 ttggagatggagataaattcttcgggtgaggaaacggtgataaaggtgcgaaagccgtac 463 |||||||||||| | ||||| || || |||||||| ||| ||||||| ||||||||||| Sbjct: 521 ttggagatggaggtgaattcctctggcgaggaaactgtggtaaaggtaagaaagccgtac 580 Query: 464 acaataacaaaacagcgggagcggtggactgaggcagagcacaaacggttccttgaagcc 523 |||||||| || ||||||||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 581 acaataacgaagcagcgggagcggtggacagaggctgaacacaaacggttccttgaagcc 640 Query: 524 ctcaaactgtatggc 538 | ||||| |||||| Sbjct: 641 ttgaaactttatggc 655 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 246 agaggtttagggggaggtatgagatactactcgcgtcaggtccagcgtttggctggagac 305 |||||| |||| |||| |||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 358 agaggtctaggaggagatatgaggtactacttgcgtcaggtccagcgtttggttggagat 417 Query: 306 acagaaggaggagtgctgttgtttgtagacgccctcaactccaagtaacaaagcga 361 | |||||||||| || |||||| |||||| |||||||||||||| ||||||||| Sbjct: 418 atggaaggaggagctctcttgtttatagacgacctcaactccaagtgacaaagcga 473
>ref|XM_480189.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2178 Score = 127 bits (64), Expect = 4e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 410 atggagataaattcttcgggtgaggaaacggtgataaaggtgcgaaagccgtacacaata 469 |||||||| ||||| || ||||||||| ||||| |||||||| | ||||| |||||||| Sbjct: 1 atggagattaattcctctggtgaggaagcggtggtaaaggtgaggaagccatacacaatc 60 Query: 470 acaaaacagcgggagcggtggactgaggcagagcacaaacggttccttgaagccctcaaa 529 ||||| ||| ||||||| |||||||||||||||||||| |||||||||||||| | ||| Sbjct: 61 acaaagcagagggagcgttggactgaggcagagcacaacaggttccttgaagccttgaaa 120 Query: 530 ctgtatgg 537 |||||||| Sbjct: 121 ctgtatgg 128
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 123 bits (62), Expect = 6e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 246 agaggtttagggggaggtatgagatactactcgcgtcaggtccagcgtttggctggagac 305 |||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 3360051 agaggtctaggaggaggtatgaggtactacttgcgtcaggtccagcgtttggttggagat 3360110 Query: 306 acagaaggaggagtgctgttgtttgtagacgccctcaactccaagtaacaaagcgaccag 365 | |||||||||||||| |||||||| || | ||||||||| || | |||||||||||| Sbjct: 3360111 atggaaggaggagtgcttttgtttgtggaagacctcaactctaactgacaaagcgaccaa 3360170 Query: 366 ttgtcagcacttccttttgttttcgcatttccctggaattggagatggagataaattctt 425 ||| || |||||| || |||| ||| || ||||||| |||||||| ||||| | Sbjct: 3360171 ttgccaacacttctgttatatttcttctttttcttgaattgggaatggagattaattcct 3360230 Query: 426 cgggtgaggaaacggtgataaaggtg 451 | ||||||||| ||||| |||||||| Sbjct: 3360231 ctggtgaggaagcggtggtaaaggtg 3360256 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 455 aagccgtacacaataacaaaacagcgggagcggtggactgaggcagagcacaaacggttc 514 ||||| |||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||| Sbjct: 3360332 aagccatacacaatcacaaagcagagggagcgttggactgaggcagagcacaacaggttc 3360391 Query: 515 cttgaagccctcaaactgtatgg 537 ||||||||| | ||||||||||| Sbjct: 3360392 cttgaagccttgaaactgtatgg 3360414
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 123 bits (62), Expect = 6e-25 Identities = 170/206 (82%) Strand = Plus / Plus Query: 246 agaggtttagggggaggtatgagatactactcgcgtcaggtccagcgtttggctggagac 305 |||||| |||| ||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 137618 agaggtctaggaggaggtatgaggtactacttgcgtcaggtccagcgtttggttggagat 137677 Query: 306 acagaaggaggagtgctgttgtttgtagacgccctcaactccaagtaacaaagcgaccag 365 | |||||||||||||| |||||||| || | ||||||||| || | |||||||||||| Sbjct: 137678 atggaaggaggagtgcttttgtttgtggaagacctcaactctaactgacaaagcgaccaa 137737 Query: 366 ttgtcagcacttccttttgttttcgcatttccctggaattggagatggagataaattctt 425 ||| || |||||| || |||| ||| || ||||||| |||||||| ||||| | Sbjct: 137738 ttgccaacacttctgttatatttcttctttttcttgaattgggaatggagattaattcct 137797 Query: 426 cgggtgaggaaacggtgataaaggtg 451 | ||||||||| ||||| |||||||| Sbjct: 137798 ctggtgaggaagcggtggtaaaggtg 137823 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Plus Query: 455 aagccgtacacaataacaaaacagcgggagcggtggactgaggcagagcacaaacggttc 514 ||||| |||||||| ||||| ||| ||||||| |||||||||||||||||||| ||||| Sbjct: 137899 aagccatacacaatcacaaagcagagggagcgttggactgaggcagagcacaacaggttc 137958 Query: 515 cttgaagccctcaaactgtatgg 537 ||||||||| | ||||||||||| Sbjct: 137959 cttgaagccttgaaactgtatgg 137981
>ref|NM_179237.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor AT1G01060 (LHY) transcript variant AT1G01060.2 mRNA, complete cds Length = 2814 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 594 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 638
>ref|NM_099988.3| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor AT1G01060 (LHY) transcript variant AT1G01060.1 mRNA, complete cds Length = 2704 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 484 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 528
>ref|NM_001035847.1| Arabidopsis thaliana LHY (LATE ELONGATED HYPOCOTYL); DNA binding AT1G01060 (LHY) transcript variant AT1G01060.3 mRNA, complete cds Length = 2517 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 401 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 445
>gb|AY519507.1| Arabidopsis thaliana MYB transcription factor (At1g01060) mRNA, complete cds Length = 1938 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 44 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 88
>emb|AJ006404.1|ATAJ6404 Arabidopsis thaliana mRNA for LATE ELONGATED HYPOCOTYL MYB transcription factor Length = 2526 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 381 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 425
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 453 gaaagccgtacacaataacaaaacagcgggagcggtggactgagg 497 ||||||| || ||||||||||| ||||| ||||| |||||||||| Sbjct: 36619 gaaagccatatacaataacaaagcagcgagagcgatggactgagg 36575
>gb|DQ103498.1| Solanum ochranthum putative At5g37260 (CT251) gene, partial cds Length = 1703 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 88 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 130
>gb|BT009406.1| Triticum aestivum clone wlm96.pk054.b21:fis, full insert mRNA sequence Length = 1999 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 455 aagccgtacacaataacaaaacagcgggagcggtggactgaggcagagcacaaacggttc 514 ||||||||||| || || || ||||||||| |||||| |||| ||||||||| || ||| Sbjct: 296 aagccgtacaccatcacgaagcagcgggagaagtggaccgaggaagagcacaagcgcttc 355 Query: 515 cttgaagccct 525 || || ||||| Sbjct: 356 ctggaggccct 366
>gb|AY941460.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7277b allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941459.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7277a allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941458.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7276b allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941457.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7276a allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941456.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7275b allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941455.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7275a allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941454.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7274b allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941453.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7274a allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941452.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7272b allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941451.1| Lycopersicon pimpinellifolium putative At5g37260 (CT251) gene, CT251-7272a allele, partial cds Length = 1738 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941450.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7206b allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941449.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7206a allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941448.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7205b allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941447.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7205a allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941446.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7204b allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941445.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7204a allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941444.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7203b allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941443.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7203a allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941442.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7201b allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941441.1| Lycopersicon chmielewskii putative At5g37260 (CT251) gene, CT251-7201a allele, partial cds Length = 1713 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 207 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 249
>gb|AY941440.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-3b allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941439.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-3a allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941438.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-2b allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941437.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-2a allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941436.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-1b allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941435.1| Solanum habrochaites putative At5g37260 (CT251) gene, CT251-1a allele, partial cds Length = 1718 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941434.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7184b allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941433.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7184a allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941432.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7183b allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941431.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7183a allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941430.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7180b allele, partial cds Length = 1726 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 211 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 253
>gb|AY941429.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7180a allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941428.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7179b allele, partial cds Length = 1726 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 211 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 253
>gb|AY941427.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7179a allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941426.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7177b allele, partial cds Length = 1726 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 211 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 253
>gb|AY941425.1| Lycopersicon chilense putative At5g37260 (CT251) gene, CT251-7177a allele, partial cds Length = 1730 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 212 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 254
>gb|AY941424.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7236b allele, partial cds Length = 1731 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941423.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7236a allele, partial cds Length = 1734 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941422.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7235b allele, partial cds Length = 1707 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941421.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7235a allele, partial cds Length = 1717 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941420.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7234b allele, partial cds Length = 1722 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 205 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 247
>gb|AY941419.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7234a allele, partial cds Length = 1725 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941418.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7233b allele, partial cds Length = 1736 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 206 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 248
>gb|AY941417.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7233a allele, partial cds Length = 1715 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 204 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 246
>gb|AY941416.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7232b allele, partial cds Length = 1723 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 204 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 246
>gb|AY941415.1| Lycopersicon peruvianum putative At5g37260 (CT251) gene, CT251-7232a allele, partial cds Length = 1723 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 480 gggagcggtggactgaggcagagcacaaacggttccttgaagc 522 ||||| ||||| |||||| |||||||||| |||||||||||| Sbjct: 204 gggagaggtggtctgaggaagagcacaaaaagttccttgaagc 246
>gb|AC121939.3| Mus musculus BAC clone RP24-208M2 from chromosome 2, complete sequence Length = 153093 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cggtggactgaggcagagcaca 506 |||||||||||||||||||||| Sbjct: 65518 cggtggactgaggcagagcaca 65539
>emb|AL845547.18| Mouse DNA sequence from clone RP23-296A4 on chromosome 2, complete sequence Length = 187738 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 485 cggtggactgaggcagagcaca 506 |||||||||||||||||||||| Sbjct: 127214 cggtggactgaggcagagcaca 127235
>emb|BX321858.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 3/10 Length = 306050 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 gagcaatgagccaactgcagt 230 ||||||||||||||||||||| Sbjct: 124575 gagcaatgagccaactgcagt 124595
>dbj|AK097655.1| Homo sapiens cDNA FLJ40336 fis, clone TESTI2031986 Length = 2100 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ttggctggagacacagaagga 314 ||||||||||||||||||||| Sbjct: 1620 ttggctggagacacagaagga 1600
>gb|AC022028.7| Homo sapiens chromosome 10 clone RP11-93H12, complete sequence Length = 156320 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 ttggctggagacacagaagga 314 ||||||||||||||||||||| Sbjct: 45490 ttggctggagacacagaagga 45470
>gb|AC093512.2| Homo sapiens chromosome 16 clone CTD-2515O10, complete sequence Length = 157481 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 ggccctgcatttcttctgcct 54 ||||||||||||||||||||| Sbjct: 54291 ggccctgcatttcttctgcct 54311
>ref|XM_521207.1| PREDICTED: Pan troglodytes LOC465794 (LOC465794), mRNA Length = 2144 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gcatttcttctgcctgctgtttga 63 |||||||||||||| ||||||||| Sbjct: 351 gcatttcttctgcccgctgtttga 328
>gb|BC036901.1| Homo sapiens cDNA clone IMAGE:5532474 Length = 2677 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gcatttcttctgcctgctgtttga 63 |||||||||||||| ||||||||| Sbjct: 517 gcatttcttctgcccgctgtttga 494
>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence Length = 160219 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 tccttctatccattcaagca 100 |||||||||||||||||||| Sbjct: 154458 tccttctatccattcaagca 154477
>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence Length = 180335 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccttctatccattcaagca 100 |||||||||||||||||||| Sbjct: 43684 tccttctatccattcaagca 43665
>gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, complete sequence Length = 202661 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccttctatccattcaagca 100 |||||||||||||||||||| Sbjct: 138439 tccttctatccattcaagca 138420
>ref|NM_024539.3| Homo sapiens ring finger protein 128 (RNF128), transcript variant 2, mRNA Length = 2688 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gcatttcttctgcctgctgtttga 63 |||||||||||||| ||||||||| Sbjct: 506 gcatttcttctgcccgctgtttga 483
>emb|Z72505.1|CEC50C10 Caenorhabditis elegans Cosmid C50C10, complete sequence Length = 22516 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 cctggaattggagatggaga 416 |||||||||||||||||||| Sbjct: 20946 cctggaattggagatggaga 20965
>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggagacacagaaggaggagt 319 |||||||||||||||||||| Sbjct: 16309 ggagacacagaaggaggagt 16328
>gb|AC164433.4| Mus musculus BAC clone RP23-357G5 from chromosome 14, complete sequence Length = 190748 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gttccttgaagccctcaaac 530 |||||||||||||||||||| Sbjct: 10976 gttccttgaagccctcaaac 10995
>gb|AC159619.2| Mus musculus BAC clone RP24-392J3 from chromosome 12, complete sequence Length = 171965 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ccttctatccattcaagcaa 101 |||||||||||||||||||| Sbjct: 76111 ccttctatccattcaagcaa 76092
>emb|AL606833.8| Human DNA sequence from clone RP11-647M7 on chromosome X Contains the 3' end of gene FLJ10178 and the 5' end of the RNF128 gene for ring finger protein 128, complete sequence Length = 59947 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gcatttcttctgcctgctgtttga 63 |||||||||||||| ||||||||| Sbjct: 49474 gcatttcttctgcccgctgtttga 49451
>gb|AC158309.6| Mus musculus chromosome 3, clone RP23-187N22, complete sequence Length = 206775 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 atttctgagcccaatttatt 130 |||||||||||||||||||| Sbjct: 132550 atttctgagcccaatttatt 132531
>gb|AC104205.15| Mus musculus chromosome 3, clone RP23-250M22, complete sequence Length = 201745 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 atttctgagcccaatttatt 130 |||||||||||||||||||| Sbjct: 189800 atttctgagcccaatttatt 189781
>gb|AC153550.10| Mus musculus 10 BAC RP23-250H23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 168208 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 taaagagaggaaggctaaactctg 193 |||||||||||| ||||||||||| Sbjct: 50550 taaagagaggaatgctaaactctg 50573
>dbj|AK126553.1| Homo sapiens cDNA FLJ44589 fis, clone BEAST2000981, weakly similar to Mus musculus ring finger protein 130 (Rnf130) Length = 2630 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 gcatttcttctgcctgctgtttga 63 |||||||||||||| ||||||||| Sbjct: 489 gcatttcttctgcccgctgtttga 466
>gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete sequence Length = 143406 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cggcccactcttttccttct 87 |||||||||||||||||||| Sbjct: 100483 cggcccactcttttccttct 100464
>gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, complete sequence Length = 136875 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 catttcttctgcctgctgtt 60 |||||||||||||||||||| Sbjct: 74232 catttcttctgcctgctgtt 74213
>gb|AC113386.2| Homo sapiens chromosome 5 clone RP11-350H19, complete sequence Length = 109953 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 actcttttccttctatccat 93 |||||||||||||||||||| Sbjct: 40498 actcttttccttctatccat 40517
>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence Length = 220878 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 catttcttctgcctgctgtt 60 |||||||||||||||||||| Sbjct: 71827 catttcttctgcctgctgtt 71808
>gb|AC091898.2| Homo sapiens chromosome 5 clone RP11-152K4, complete sequence Length = 177709 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 actcttttccttctatccat 93 |||||||||||||||||||| Sbjct: 160833 actcttttccttctatccat 160852
>gb|DP000052.1| Sus scrofa target 126 genomic scaffold Length = 432382 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 agttgaagataaagagagga 180 |||||||||||||||||||| Sbjct: 398705 agttgaagataaagagagga 398686
>dbj|AK045502.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230207K17 product:unclassifiable, full insert sequence Length = 3061 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggagacacagaaggaggagt 319 |||||||||||||||||||| Sbjct: 1263 ggagacacagaaggaggagt 1244
>dbj|AK082191.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230021G24 product:unclassifiable, full insert sequence Length = 3681 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ggagacacagaaggaggagt 319 |||||||||||||||||||| Sbjct: 1062 ggagacacagaaggaggagt 1043
>gb|AC013448.7| Homo sapiens BAC clone RP11-551D18 from 2, complete sequence Length = 129553 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 366 ttgtcagcacttccttttgttttc 389 ||||||||||| |||||||||||| Sbjct: 78642 ttgtcagcactgccttttgttttc 78665
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 taaagagaggaaggctaaactctg 193 |||||||||||| ||||||||||| Sbjct: 62089 taaagagaggaatgctaaactctg 62066
>gb|AC140785.4| Mus musculus BAC clone RP24-137J7 from 10, complete sequence Length = 150763 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggagacacagaaggaggagt 319 |||||||||||||||||||| Sbjct: 119599 ggagacacagaaggaggagt 119618
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 ccaatttattcaggtcatgg 140 |||||||||||||||||||| Sbjct: 3667875 ccaatttattcaggtcatgg 3667894
>gb|AC141564.4| Mus musculus BAC clone RP23-361B14 from 10, complete sequence Length = 210784 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggagacacagaaggaggagt 319 |||||||||||||||||||| Sbjct: 149466 ggagacacagaaggaggagt 149485
>emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chromosome 14, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gttccttgaagccctcaaac 530 |||||||||||||||||||| Sbjct: 209149 gttccttgaagccctcaaac 209168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,216,330 Number of Sequences: 3902068 Number of extensions: 5216330 Number of successful extensions: 97733 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97548 Number of HSP's gapped (non-prelim): 185 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
