Clone Information

BLAST Search Result

Clone Name	baal2a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	409	e-114
2	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	369	e-102
3	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	340	2e-93
4	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	329	4e-90
5	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	311	8e-85
6	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	308	7e-84
7	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	308	7e-84
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	302	6e-82
9	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	300	2e-81
10	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	300	3e-81
11	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	297	2e-80
12	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	296	3e-80
13	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	294	1e-79
14	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	293	3e-79
15	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	290	2e-78
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	224	2e-58
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	139	9e-33
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	138	1e-32
19	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	36	0.11
20	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	35	0.14
21	KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	35	0.19
22	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	34	0.42
23	KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	34	0.42
24	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	33	0.55
25	RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)	32	1.2
26	KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	32	1.6
27	KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	32	1.6
28	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	32	1.6
29	G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	32	1.6
30	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	32	1.6
31	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	32	1.6
32	PCRB_SULAC (Q4JAS3) Protein pcrB homolog	31	2.7
33	PTR2_CANAL (P46030) Peptide transporter PTR2	31	2.7
34	RECA_CHRVI (O32377) Protein recA (Recombinase A)	31	3.5
35	RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2...	31	3.5
36	KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr...	30	4.6
37	UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine ...	30	4.6
38	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	30	4.6
39	RECA_GEOSL (P62215) Protein recA (Recombinase A)	30	4.6
40	ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.6
41	TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1...	30	4.6
42	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	30	4.6
43	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	30	4.6
44	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	30	4.6
45	CDCH_HALSA (Q9HPF0) Protein cdcH	30	4.6
46	COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	6.0
47	Y1420_RALSO (Q8XZH5) UPF0085 protein RSc1420	30	6.0
48	RECA_VIBCH (P45383) Protein recA (Recombinase A)	30	6.0
49	RECA_PORGI (P77925) Protein recA (Recombinase A)	30	6.0
50	DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycos...	30	6.0
51	VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG)...	30	6.0
52	RECA_CHLTE (O52393) Protein recA (Recombinase A)	30	6.0
53	PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC ...	30	6.0
54	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	30	6.0
55	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	30	6.0
56	KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	30	6.0
57	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	30	6.0
58	RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)	30	6.0
59	ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.0
60	ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.0
61	ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl trans...	30	6.0
62	RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)	30	6.0
63	RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)	30	6.0
64	KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ...	30	7.9
65	RECA_VIBAN (P26348) Protein recA (Recombinase A)	30	7.9
66	RECA_LISMO (Q9L723) Protein recA (Recombinase A)	30	7.9
67	RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)	30	7.9
68	RECA_LISIN (Q92BV7) Protein recA (Recombinase A)	30	7.9
69	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	30	7.9
70	RECA_AERSA (P94190) Protein recA (Recombinase A)	30	7.9
71	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	30	7.9
72	DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)	30	7.9
73	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	30	7.9
74	KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A...	30	7.9
75	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	30	7.9

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  409 bits (1052), Expect = e-114
 Identities = 204/210 (97%), Positives = 204/210 (97%)
 Frame = +3

Query: 12  PASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 191
           PASTPTNFLG     KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD
Sbjct: 12  PASTPTNFLGKKLK-KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 70

Query: 192 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 371
           DQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK
Sbjct: 71  DQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 130

Query: 372 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 551
           LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG
Sbjct: 131 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 190

Query: 552 EPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           EPAKLIRQRYREAADMIKKGKMCCLFINDL
Sbjct: 191 EPAKLIRQRYREAADMIKKGKMCCLFINDL 220

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  369 bits (947), Expect = e-102
 Identities = 187/212 (88%), Positives = 195/212 (91%), Gaps = 2/212 (0%)
 Frame = +3

Query: 12  PASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDI 185
           PASTPTNFLG     KQVTSAVNYHGKSS  NRF VMA E +DE + TD  +WKGLAYDI
Sbjct: 12  PASTPTNFLGKKLK-KQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDI 69

Query: 186 SDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFM 365
           SDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FM
Sbjct: 70  SDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFM 129

Query: 366 DKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN 545
           DKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN
Sbjct: 130 DKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN 189

Query: 546 AGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
            GEPAKLIRQRYREAAD+IKKGKMCCLFINDL
Sbjct: 190 -GEPAKLIRQRYREAADIIKKGKMCCLFINDL 220

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  340 bits (873), Expect = 2e-93
 Identities = 170/215 (79%), Positives = 188/215 (87%), Gaps = 5/215 (2%)
 Frame = +3

Query: 12  PASTPT--NFLGXXSSXKQVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLA 176
           PASTPT  +FLG   +  QV++AV YHGKSS +N RF  MAA+ +DE + TD  +WKGLA
Sbjct: 12  PASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLA 71

Query: 177 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 356
           YDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA 
Sbjct: 72  YDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAK 131

Query: 357 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 536
            FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELE
Sbjct: 132 GFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELE 191

Query: 537 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           SGNAGEPAKLIRQRYREA+D+IKKGKM CLFINDL
Sbjct: 192 SGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDL 226

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  329 bits (844), Expect = 4e-90
 Identities = 171/214 (79%), Positives = 186/214 (86%), Gaps = 4/214 (1%)
 Frame = +3

Query: 12  PASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAY 179
           PASTPT FLG     K+V +   YHG +   +R   VMAA+  +D+ + TD  +WKGLAY
Sbjct: 12  PASTPTIFLG-----KKVKNY--YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAY 64

Query: 180 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 359
           DISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPA
Sbjct: 65  DISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPA 124

Query: 360 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 539
           FMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 125 FMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 184

Query: 540 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GN GEPAKLIRQRYREAAD+I KGKMCCLFINDL
Sbjct: 185 GN-GEPAKLIRQRYREAADIINKGKMCCLFINDL 217

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  311 bits (798), Expect = 8e-85
 Identities = 156/210 (74%), Positives = 176/210 (83%)
 Frame = +3

Query: 12  PASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 191
           PAST   FLG     K+V +   +   + K+N    + A   D++ + D+W+GLAYD SD
Sbjct: 29  PAST---FLG-----KKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSD 80

Query: 192 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 371
           DQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDK
Sbjct: 81  DQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDK 140

Query: 372 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 551
           LVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAG
Sbjct: 141 LVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAG 200

Query: 552 EPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           EPAKLIRQRYREAAD+IKKGKMCCLFINDL
Sbjct: 201 EPAKLIRQRYREAADLIKKGKMCCLFINDL 230

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  308 bits (790), Expect = 7e-84
 Identities = 159/214 (74%), Positives = 179/214 (83%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   ARGPASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 179
           AR      T F G  SS K+  SA  +   SS    F ++A E + D++ + DKWKGLAY
Sbjct: 23  ARASLVPSTAFFG--SSLKK--SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 180 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 359
           DISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 360 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 539
           FMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 540 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDL
Sbjct: 197 GNAGEPAKLIRQRYREAADIIKKGKMCCLFINDL 230

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  308 bits (790), Expect = 7e-84
 Identities = 159/214 (74%), Positives = 179/214 (83%), Gaps = 1/214 (0%)
 Frame = +3

Query: 3   ARGPASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 179
           AR      T F G  SS K+  SA  +   SS    F ++A E + D++ + DKWKGLAY
Sbjct: 23  ARASLVPSTAFFG--SSLKK--SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76

Query: 180 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 359
           DISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPA
Sbjct: 77  DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136

Query: 360 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 539
           FMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196

Query: 540 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDL
Sbjct: 197 GNAGEPAKLIRQRYREAADIIKKGKMCCLFINDL 230

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  302 bits (773), Expect = 6e-82
 Identities = 154/212 (72%), Positives = 178/212 (83%), Gaps = 3/212 (1%)
 Frame = +3

Query: 15  ASTPTN-FLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDI 185
           AS P++ FLG  SS K+V S       +SK +  ++    ++DE + TDK  WKGLA+D 
Sbjct: 25  ASVPSSTFLG--SSLKKVNSRFT----NSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDT 78

Query: 186 SDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFM 365
           SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFM
Sbjct: 79  SDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFM 138

Query: 366 DKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN 545
           DKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGN
Sbjct: 139 DKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGN 198

Query: 546 AGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           AGEPAKLIRQRYREAAD+I+KGKMC LFINDL
Sbjct: 199 AGEPAKLIRQRYREAADIIRKGKMCALFINDL 230

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  300 bits (769), Expect = 2e-81
 Identities = 140/177 (79%), Positives = 158/177 (89%)
 Frame = +3

Query: 111 FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 290
           F ++A ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE
Sbjct: 51  FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110

Query: 291 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 470
           Y+S GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSF
Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSF 170

Query: 471 QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDL
Sbjct: 171 QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDL 227

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  300 bits (767), Expect = 3e-81
 Identities = 152/214 (71%), Positives = 180/214 (84%), Gaps = 3/214 (1%)
 Frame = +3

Query: 9   GPASTPTN-FLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 179
           G AS P++ F G  +S K+V S+   + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 23  GGASGPSSAFFG--TSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 180 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 359
           D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPA
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140

Query: 360 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 539
           F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES
Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200

Query: 540 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GNAGEPAKLIRQRYREA+D+IKKGKMC LFINDL
Sbjct: 201 GNAGEPAKLIRQRYREASDLIKKGKMCVLFINDL 234

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  297 bits (760), Expect = 2e-80
 Identities = 143/183 (78%), Positives = 161/183 (87%), Gaps = 4/183 (2%)
 Frame = +3

Query: 105 NRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 272
           N+   + AE ID    ++ ++D+WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH A
Sbjct: 52  NKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHA 111

Query: 273 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 452
           VL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGK
Sbjct: 112 VLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGK 171

Query: 453 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFI 632
           GQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFI
Sbjct: 172 GQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFI 231

Query: 633 NDL 641
           NDL
Sbjct: 232 NDL 234

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  296 bits (758), Expect = 3e-80
 Identities = 155/210 (73%), Positives = 171/210 (81%), Gaps = 1/210 (0%)
 Frame = +3

Query: 15  ASTPTN-FLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 191
           AS PT+ FLG  SS K+ T+       SS+    TV AAEN  E++NTDKW  LA D SD
Sbjct: 25  ASVPTSGFLG--SSLKKHTNV--RFPSSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSD 78

Query: 192 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 371
           DQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD DN +G FYIAPAFMDK
Sbjct: 79  DQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDK 138

Query: 372 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 551
           LVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAG
Sbjct: 139 LVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAG 198

Query: 552 EPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           EPAKLIRQRYREAAD+I KGKMC LFINDL
Sbjct: 199 EPAKLIRQRYREAADLIAKGKMCALFINDL 228

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  294 bits (753), Expect = 1e-79
 Identities = 143/183 (78%), Positives = 161/183 (87%), Gaps = 4/183 (2%)
 Frame = +3

Query: 105 NRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 272
           NR   +AAE  + D K+ T  D+WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH A
Sbjct: 52  NRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHA 111

Query: 273 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 452
           VL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGK
Sbjct: 112 VLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGK 171

Query: 453 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFI 632
           GQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG +CCLFI
Sbjct: 172 GQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFI 231

Query: 633 NDL 641
           NDL
Sbjct: 232 NDL 234

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  293 bits (750), Expect = 3e-79
 Identities = 153/211 (72%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
 Frame = +3

Query: 15  ASTPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDIS 188
           AS PT+     S  K V S V  + K +  +   V A + I+E + T  D+WKGLAYDIS
Sbjct: 25  ASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDIS 83

Query: 189 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 368
           DDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+   DN   GFYIAPAF+D
Sbjct: 84  DDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLD 141

Query: 369 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 548
           KLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA
Sbjct: 142 KLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 201

Query: 549 GEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GEPAKLIRQRYREAAD+I KGKMC LFINDL
Sbjct: 202 GEPAKLIRQRYREAADLIAKGKMCALFINDL 232

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  290 bits (742), Expect = 2e-78
 Identities = 137/180 (76%), Positives = 158/180 (87%)
 Frame = +3

Query: 102 ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 281
           +NR   + A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++
Sbjct: 51  SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109

Query: 282 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 461
           SYEYVSQ L+ Y  DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQG
Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQG 169

Query: 462 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           KSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDL
Sbjct: 170 KSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDL 229

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  224 bits (570), Expect = 2e-58
 Identities = 110/169 (65%), Positives = 134/169 (79%), Gaps = 3/169 (1%)
 Frame = +3

Query: 144 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 314
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 315 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 494
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

Query: 495 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           +GI PI+MSAGELESGNAGEPAKLIR RYREA+D+IKKG+MC LFINDL
Sbjct: 155 LGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDL 203

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  139 bits (349), Expect = 9e-33
 Identities = 64/101 (63%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +3

Query: 342 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 521
           +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62

Query: 522 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDL 641
            GELES +AG+PA+LIR RYRE A++IK +GKMC L INDL
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDL 103

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  138 bits (348), Expect = 1e-32
 Identities = 64/101 (63%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +3

Query: 342 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 521
           +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62

Query: 522 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDL 641
            GELES +AG+PA+LIR RYRE A++IK +GKMC L INDL
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDL 103

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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 20/76 (26%), Positives = 39/76 (51%)
 Frame = +3

Query: 414 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 593
           +K P  L ++G  G GK+     V  +   + I++S   +   +AGE  K++R+ + EA+
Sbjct: 53  LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112

Query: 594 DMIKKGKMCCLFINDL 641
                 K   +FI+++
Sbjct: 113 SHAVSDKPSVIFIDEI 128

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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 20/76 (26%), Positives = 41/76 (53%)
 Frame = +3

Query: 414 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 593
           IK P  + ++G  G GK+     V A +G+N + + +  +     GE A++IR+ +  A 
Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221

Query: 594 DMIKKGKMCCLFINDL 641
              K+ + C +F++++
Sbjct: 222 ---KEHEPCVIFMDEI 234

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>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 198

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 429 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 599
           I+ I GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69

Query: 600 IKKG 611
           +  G
Sbjct: 70  VPSG 73

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 22/77 (28%), Positives = 38/77 (49%)
 Frame = +3

Query: 411 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 590
           NIK P  + ++G  G GK+   + V  +   N I +   EL S   GE  K +R+ +R+A
Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544

Query: 591 ADMIKKGKMCCLFINDL 641
             +      C +F +++
Sbjct: 545 RQVAP----CVIFFDEI 557

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>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 193

 Score = 33.9 bits (76), Expect = 0.42
 Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +3

Query: 429 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 599
           I+ + GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65

Query: 600 IKKG 611
           +  G
Sbjct: 66  VPSG 69

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>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 33.5 bits (75), Expect = 0.55
 Identities = 19/68 (27%), Positives = 37/68 (54%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GKS+  + V  + G     +S+ +L S   GE  +L+RQ +    +M ++ K 
Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222

Query: 618 CCLFINDL 641
             +FI+++
Sbjct: 223 SIIFIDEI 230

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>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)|
          Length = 372

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 480 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           +V +   + P     GE+   + G  A+L+ Q  R+    IKK    C+FIN +
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQI 194

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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 423 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 599
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 600 IKKGKM 617
           IK+GK+
Sbjct: 57  IKEGKI 62

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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 423 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 599
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 600 IKKGKM 617
           IK+GK+
Sbjct: 57  IKEGKI 62

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>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 374  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 538
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984

Query: 539  -WERWRASQAHQAAVP*G 589
             W R R      A  P G
Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002

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>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 548

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 291 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 470
           Y SQ +  YD    M   Y+    M+    H++    T+P   +P+I G+ G  GQ   +
Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387

Query: 471 QC 476
           QC
Sbjct: 388 QC 389

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 374  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 538
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985

Query: 539  -WERWRASQAHQAAVP*G 589
             W R R      A  P G
Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +2

Query: 374  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 538
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209

Query: 539  -WERWRASQAHQAAVP*G 589
             W R R      A  P G
Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227

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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 347 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 171
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -1

Query: 259 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 113
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

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>RECA_CHRVI (O32377) Protein recA (Recombinase A)|
          Length = 347

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 22/96 (22%), Positives = 43/96 (44%)
 Frame = +3

Query: 354 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           P + +KL V+++   ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 101 PVYAEKLGVNMTDLLVSQPDTG-EQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEM 159

Query: 534 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
              + G  A+L+ Q  R+    IK+   C +FIN +
Sbjct: 160 GDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQI 195

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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -3

Query: 593 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 468
           C+L+ P+P   G L+ + TL L+G H  G +   LG+ K  ++
Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336

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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +3

Query: 423 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 602
           PL + I G    GK  QCEL+  K G+  + +SAG+L        +    +  R A + +
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117

Query: 603 KKGKM 617
           +KG++
Sbjct: 118 EKGQL 122

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>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase) (UMP/CMP kinase)
          Length = 202

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +3

Query: 417 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 587
           K P ++ + GG G GK  QC  +    G     +SAG+L   E  +  E   +I+     
Sbjct: 12  KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64

Query: 588 AADMIKKGKM 617
             +MIK+GK+
Sbjct: 65  --NMIKEGKI 72

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>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/68 (26%), Positives = 35/68 (51%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GKS+  + V  +       +S+ +L S   GE  KL++Q +     M ++ K 
Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226

Query: 618 CCLFINDL 641
             +FI+++
Sbjct: 227 SIIFIDEV 234

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>RECA_GEOSL (P62215) Protein recA (Recombinase A)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+   + G  A+L+ Q  R+   +I K   C +FIN +
Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQI 195

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>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 204 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 374
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121

Query: 375 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 461
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 26/95 (27%), Positives = 42/95 (44%)
 Frame = -3

Query: 452 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 273
           L    T++E    +  G ++ G  +  L       +E   G  E + P+A  DVL+ AE 
Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212

Query: 272 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 168
           G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246

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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/68 (23%), Positives = 35/68 (51%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 618 CCLFINDL 641
           C +F++++
Sbjct: 228 CIIFMDEI 235

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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/68 (23%), Positives = 35/68 (51%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 618 CCLFINDL 641
           C +F++++
Sbjct: 228 CIIFMDEI 235

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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 16/68 (23%), Positives = 35/68 (51%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 618 CCLFINDL 641
           C +F++++
Sbjct: 228 CIIFMDEI 235

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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +3

Query: 402 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 581
           T   ++ P  + ++G  G GK+   + V  +   N I +   +L S   GE  K IRQ +
Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548

Query: 582 REA 590
           R+A
Sbjct: 549 RKA 551

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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 417 KIPLILGIWGGKGQGKSFQCELVFAKMG 500
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30

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>Y1420_RALSO (Q8XZH5) UPF0085 protein RSc1420|
          Length = 279

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
 Frame = -3

Query: 638 IVDEEA------AHLTLLDHVCSLTVPLPDELGWLSSVPTLQLSGTHHDGVDAHLGEHKL 477
           +VD EA      A  T+LD   +   PL  ELG  SS       G  H   D     +K 
Sbjct: 77  LVDAEANRIVHQARATILDMFQTFIEPLERELGLKSS----HAIGRFHQNADTEA--YKN 130

Query: 476 TLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRS 351
            +E  + +LA  D         GQ H+   E D  LV  SRS
Sbjct: 131 RIEAINFSLAHDD---------GQSHKNLAEADVILVGVSRS 163

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>RECA_VIBCH (P45383) Protein recA (Recombinase A)|
          Length = 354

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/96 (20%), Positives = 42/96 (43%)
 Frame = +3

Query: 354 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 534 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
              + G  A+++ Q  R+    +K+    C+FIN +
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQI 194

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>RECA_PORGI (P77925) Protein recA (Recombinase A)|
          Length = 340

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+     G  A+L+ Q  R+    I K    C+FIN L
Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQL 203

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>DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycosylase-related|
            protein DME)
          Length = 1729

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
 Frame = +3

Query: 18   STPTNFLGXXSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQ 197
            S+  N L   +S  +  +AV Y  K + A     M     D K+ T +W  L  D+  ++
Sbjct: 1146 SSLQNILVESNSSNKEQTAVEY--KETNATILREMKGTLADGKKPTSQWDSLRKDVEGNE 1203

Query: 198  QDITRGKGIVDSLFQAPTGDGTHEAV-LSSYEYVSQGLRKYDFDNTM 335
                R K  +DS+         +EA+  +S   +S+ +++   +N +
Sbjct: 1204 GRQERNKNNMDSI--------DYEAIRRASISEISEAIKERGMNNML 1242

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>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 502 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 365
           M I++ TSS W   P PL PPQ+P +   ++  R  +   + T S S
Sbjct: 49  MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94

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>RECA_CHLTE (O52393) Protein recA (Recombinase A)|
          Length = 346

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+     G  A+L+ Q  R+    I K    CLFIN L
Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQL 208

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>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -3

Query: 419 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 255
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233

Query: 254 ARGRLEERVHDALPSGDVLLVVG 186
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = +3

Query: 414 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 593
           IK P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313

Query: 594 DMIKKGKMCCLFINDL 641
              +K     +FI+++
Sbjct: 314 ---EKNSPAIIFIDEI 326

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>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 444 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 596
           G  G GK+   + V ++   + I M+  EL     GE AKL+R  ++ A D
Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD 240

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>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 414 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 584
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A         R +
Sbjct: 5   LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55

Query: 585 EAADMIKKGKM 617
           + +++++KG++
Sbjct: 56  KLSEIMEKGQL 66

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
 Frame = +3

Query: 327 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 503
           N + G   A    +++V  L K    T    KIP  + + G  G GK+   + +  + G+
Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232

Query: 504 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
               +S  E      G  A  +R  +++A    K+   C +FI+++
Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEI 274

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>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)|
          Length = 358

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+   + G  A+L+ Q  R+    I K + C +FIN +
Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQI 198

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>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 204 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 374
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121

Query: 375 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 461
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 204 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 374
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 375 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 461
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +3

Query: 204 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 374
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 375 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 461
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)|
          Length = 349

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/96 (20%), Positives = 42/96 (43%)
 Frame = +3

Query: 354 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 534 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
              + G  A+++ Q  R+    +K+    C+FIN +
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQI 194

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>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)|
          Length = 349

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 20/96 (20%), Positives = 42/96 (43%)
 Frame = +3

Query: 354 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           P +  KL V++ +  ++ P+      L I     +  +    +V +   + P     GE+
Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158

Query: 534 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
              + G  A+++ Q  R+    +K+    C+FIN +
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQI 194

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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 393 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54

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>RECA_VIBAN (P26348) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/96 (19%), Positives = 42/96 (43%)
 Frame = +3

Query: 354 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 533
           P +  KL V++ +  ++ P+      L I     +  +    ++ +   + P     GE+
Sbjct: 100 PIYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAIDVIVIDSVAALTPKAEIEGEM 158

Query: 534 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
              + G  A+++ Q  R+    +K+    C+FIN +
Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQI 194

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>RECA_LISMO (Q9L723) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQI 193

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>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQI 193

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>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +3

Query: 525 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQI 193

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>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 444 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 623
           G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676

Query: 624 LFINDL 641
           +F +++
Sbjct: 677 IFFDEV 682



 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +3

Query: 444 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 623
           G  G GK+     +  ++ +  + ++A E+ SG +GE      Q+ RE  D       C 
Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359

Query: 624 LFINDL 641
           +FI+++
Sbjct: 360 VFIDEI 365

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>RECA_AERSA (P94190) Protein recA (Recombinase A)|
          Length = 353

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +3

Query: 480 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 641
           +V +   + P     GE+   + G  A+L+ Q  R+    IK     C+FIN +
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQI 194

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>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 444 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 623
           G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677

Query: 624 LFINDL 641
           +F +++
Sbjct: 678 IFFDEV 683

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>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1060

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = +3

Query: 78   NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 257
            N+H K +      + A +  D  R       LAY+++D    +       D +F A +G 
Sbjct: 807  NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858

Query: 258  GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 416
            G   HEA     E  S+   KYDF+  + G  + P  +  L      NF  L  +
Sbjct: 859  GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907

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>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 17/68 (25%), Positives = 34/68 (50%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           ++G  G GK+   + V  +   + + +   EL     GE AKL+R  ++    + K+   
Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242

Query: 618 CCLFINDL 641
           C +FI+++
Sbjct: 243 CIIFIDEI 250

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>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +3

Query: 414 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 584
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A         R +
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55

Query: 585 EAADMIKKGKM 617
           + +++++KG++
Sbjct: 56  KLSEIMEKGQL 66

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>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +3

Query: 438 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 617
           +WG  G GK+   + V  +   N I +   EL +   GE  + IRQ +  A   +     
Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627

Query: 618 CCLFINDL 641
           C +F ++L
Sbjct: 628 CVIFFDEL 635


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,146,793
Number of Sequences: 219361
Number of extensions: 1898381
Number of successful extensions: 6268
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 6066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6251
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result