| Clone Name | baal1k24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188507.1| Oryza sativa (japonica cultivar-group), Ozsa8176 predicted mRNA Length = 717 Score = 424 bits (214), Expect = e-115 Identities = 392/449 (87%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 63 ccgccgctcttctccgtgccgatgtcaccggcctcggagtcgccggcggcgaccacgcgg 122 ||||||||||||||||||||| ||||| | | |||||||||||||||||| | | |||| Sbjct: 193 ccgccgctcttctccgtgccg--gtcac-gccgtcggagtcgccggcggcggcgaggcgg 249 Query: 123 cgggacgacgatgaggaggagcggcgcaggtactacctcaacctcggctacgccatccgt 182 ||||| || || |||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 250 cgggaggaggacgaggaggagcggcggaggtactacctcaacatggggtacgccatccgg 309 Query: 183 acgctcagggaggagattcccgacgtcttctacaaggagcccagcttcgatatatacaga 242 ||||| ||||||||| | ||||| ||||||| |||||||||||||||||| || |||||| Sbjct: 310 acgctgagggaggagctccccgatgtcttctccaaggagcccagcttcgacatctacaga 369 Query: 243 gatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaaaagt 302 |||||||||||| ||| ||| ||| |||||||||| ||||||||||| ||||| ||||| Sbjct: 370 gatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataaaagg 429 Query: 303 ttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttgatata 362 ||||||||| ||||||||| || || || ||||||||||||||| |||||||||||||| Sbjct: 430 atattctgggcattgcgcttcaccggccgaatcttcttcaaagcactatgggttgatata 489 Query: 363 gttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatggtatt 422 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 490 gttagtatatggcagcctgctgagaatcttatcatgattcgctggattgcccatggcatt 549 Query: 423 cctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaactcgac 482 ||| | ||||||||||| | |||| |||||||| || || || | ||| ||||||||| Sbjct: 550 cctcgagtcccatgggaggcccatggtcgctttgatggtgcttctgagtataaactcgac 609 Query: 483 aggaacgggaagatctatgagcacaaggt 511 | ||| ||||||||||| ||||| ||||| Sbjct: 610 aagaatgggaagatctacgagcataaggt 638
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 307 bits (155), Expect = 2e-80 Identities = 302/351 (86%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||| ||||| || Sbjct: 6653663 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 6653722 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| ||||||||| || || || ||||||||||||||| |||||||||| Sbjct: 6653723 aaggatattctgggcattgcgcttcaccggccgaatcttcttcaaagcactatgggttga 6653782 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 6653783 tatagttagtatatggcagcctgctgagaatcttatcatgattcgctggattgcccatgg 6653842 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||| | ||||||||||| | |||| |||||||| || || || | ||| ||||| Sbjct: 6653843 cattcctcgagtcccatgggaggcccatggtcgctttgatggtgcttctgagtataaact 6653902 Query: 479 cgacaggaacgggaagatctatgagcacaaggtacataacattgctacgaacccacctac 538 ||||| ||| ||||||||||| ||||| ||||| || || |||||| ||| ||||| || Sbjct: 6653903 cgacaagaatgggaagatctacgagcataaggtgcacaatgttgctatgaatccaccaac 6653962 Query: 539 aaagtacaaggtcctgtctgttcaagagctagtcagatcacttagctgccc 589 ||||| |||||||||| | || || |||||| ||||||| ||| ||||||| Sbjct: 6653963 aaagttcaaggtcctgccagtccacgagctaatcagatcgcttggctgccc 6654013 Score = 159 bits (80), Expect = 1e-35 Identities = 156/179 (87%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 63 ccgccgctcttctccgtgccgatgtcaccggcctcggagtcgccggcggcgaccacgcgg 122 ||||||||||||||||||||| ||||| | | |||||||||||||||||| | | |||| Sbjct: 6652401 ccgccgctcttctccgtgccg--gtcac-gccgtcggagtcgccggcggcggcgaggcgg 6652457 Query: 123 cgggacgacgatgaggaggagcggcgcaggtactacctcaacctcggctacgccatccgt 182 ||||| || || |||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 6652458 cgggaggaggacgaggaggagcggcggaggtactacctcaacatggggtacgccatccgg 6652517 Query: 183 acgctcagggaggagattcccgacgtcttctacaaggagcccagcttcgatatatacag 241 ||||| ||||||||| | ||||| ||||||| |||||||||||||||||| || ||||| Sbjct: 6652518 acgctgagggaggagctccccgatgtcttctccaaggagcccagcttcgacatctacag 6652576 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 gggacgacgatgaggaggagcggcgc 149 |||||||||| ||||||||||||||| Sbjct: 28425585 gggacgacgacgaggaggagcggcgc 28425560 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tacagagatgatattgtcgt 256 |||||||||||||||||||| Sbjct: 5162459 tacagagatgatattgtcgt 5162440
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 307 bits (155), Expect = 2e-80 Identities = 302/351 (86%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||| ||||| || Sbjct: 5815 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 5874 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| ||||||||| || || || ||||||||||||||| |||||||||| Sbjct: 5875 aaggatattctgggcattgcgcttcaccggccgaatcttcttcaaagcactatgggttga 5934 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5935 tatagttagtatatggcagcctgctgagaatcttatcatgattcgctggattgcccatgg 5994 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||| | ||||||||||| | |||| |||||||| || || || | ||| ||||| Sbjct: 5995 cattcctcgagtcccatgggaggcccatggtcgctttgatggtgcttctgagtataaact 6054 Query: 479 cgacaggaacgggaagatctatgagcacaaggtacataacattgctacgaacccacctac 538 ||||| ||| ||||||||||| ||||| ||||| || || |||||| ||| ||||| || Sbjct: 6055 cgacaagaatgggaagatctacgagcataaggtgcacaatgttgctatgaatccaccaac 6114 Query: 539 aaagtacaaggtcctgtctgttcaagagctagtcagatcacttagctgccc 589 ||||| |||||||||| | || || |||||| ||||||| ||| ||||||| Sbjct: 6115 aaagttcaaggtcctgccagtccacgagctaatcagatcgcttggctgccc 6165 Score = 159 bits (80), Expect = 1e-35 Identities = 156/179 (87%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 63 ccgccgctcttctccgtgccgatgtcaccggcctcggagtcgccggcggcgaccacgcgg 122 ||||||||||||||||||||| ||||| | | |||||||||||||||||| | | |||| Sbjct: 4553 ccgccgctcttctccgtgccg--gtcac-gccgtcggagtcgccggcggcggcgaggcgg 4609 Query: 123 cgggacgacgatgaggaggagcggcgcaggtactacctcaacctcggctacgccatccgt 182 ||||| || || |||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 4610 cgggaggaggacgaggaggagcggcggaggtactacctcaacatggggtacgccatccgg 4669 Query: 183 acgctcagggaggagattcccgacgtcttctacaaggagcccagcttcgatatatacag 241 ||||| ||||||||| | ||||| ||||||| |||||||||||||||||| || ||||| Sbjct: 4670 acgctgagggaggagctccccgatgtcttctccaaggagcccagcttcgacatctacag 4728
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 307 bits (155), Expect = 2e-80 Identities = 302/351 (86%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||| ||||| || Sbjct: 133834 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 133893 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| ||||||||| || || || ||||||||||||||| |||||||||| Sbjct: 133894 aaggatattctgggcattgcgcttcaccggccgaatcttcttcaaagcactatgggttga 133953 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 133954 tatagttagtatatggcagcctgctgagaatcttatcatgattcgctggattgcccatgg 134013 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||| | ||||||||||| | |||| |||||||| || || || | ||| ||||| Sbjct: 134014 cattcctcgagtcccatgggaggcccatggtcgctttgatggtgcttctgagtataaact 134073 Query: 479 cgacaggaacgggaagatctatgagcacaaggtacataacattgctacgaacccacctac 538 ||||| ||| ||||||||||| ||||| ||||| || || |||||| ||| ||||| || Sbjct: 134074 cgacaagaatgggaagatctacgagcataaggtgcacaatgttgctatgaatccaccaac 134133 Query: 539 aaagtacaaggtcctgtctgttcaagagctagtcagatcacttagctgccc 589 ||||| |||||||||| | || || |||||| ||||||| ||| ||||||| Sbjct: 134134 aaagttcaaggtcctgccagtccacgagctaatcagatcgcttggctgccc 134184 Score = 159 bits (80), Expect = 1e-35 Identities = 156/179 (87%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 63 ccgccgctcttctccgtgccgatgtcaccggcctcggagtcgccggcggcgaccacgcgg 122 ||||||||||||||||||||| ||||| | | |||||||||||||||||| | | |||| Sbjct: 132572 ccgccgctcttctccgtgccg--gtcac-gccgtcggagtcgccggcggcggcgaggcgg 132628 Query: 123 cgggacgacgatgaggaggagcggcgcaggtactacctcaacctcggctacgccatccgt 182 ||||| || || |||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 132629 cgggaggaggacgaggaggagcggcggaggtactacctcaacatggggtacgccatccgg 132688 Query: 183 acgctcagggaggagattcccgacgtcttctacaaggagcccagcttcgatatatacag 241 ||||| ||||||||| | ||||| ||||||| |||||||||||||||||| || ||||| Sbjct: 132689 acgctgagggaggagctccccgatgtcttctccaaggagcccagcttcgacatctacag 132747
>dbj|AK063996.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-E12, full insert sequence Length = 2143 Score = 307 bits (155), Expect = 2e-80 Identities = 302/351 (86%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| |||||||||| ||||||||||| ||||| || Sbjct: 1516 cagagatgatattgtcttcaaagatcctctcaataaattcgagggcattgataattataa 1575 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| ||||||||| || || || ||||||||||||||| |||||||||| Sbjct: 1576 aaggatattctgggcattgcgcttcaccggccgaatcttcttcaaagcactatgggttga 1635 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1636 tatagttagtatatggcagcctgctgagaatcttatcatgattcgctggattgcccatgg 1695 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||| | ||||||||||| | |||| |||||||| || || || | ||| ||||| Sbjct: 1696 cattcctcgagtcccatgggaggcccatggtcgctttgatggtgcttctgagtataaact 1755 Query: 479 cgacaggaacgggaagatctatgagcacaaggtacataacattgctacgaacccacctac 538 ||||| ||| ||||||||||| ||||| ||||| || || |||||| ||| ||||| || Sbjct: 1756 cgacaagaatgggaagatctacgagcataaggtgcacaatgttgctatgaatccaccaac 1815 Query: 539 aaagtacaaggtcctgtctgttcaagagctagtcagatcacttagctgccc 589 ||||| |||||||||| | || || |||||| ||||||| ||| ||||||| Sbjct: 1816 aaagttcaaggtcctgccagtccacgagctaatcagatcgcttggctgccc 1866 Score = 159 bits (80), Expect = 1e-35 Identities = 156/179 (87%), Gaps = 3/179 (1%) Strand = Plus / Plus Query: 63 ccgccgctcttctccgtgccgatgtcaccggcctcggagtcgccggcggcgaccacgcgg 122 ||||||||||||||||||||| ||||| | | |||||||||||||||||| | | |||| Sbjct: 254 ccgccgctcttctccgtgccg--gtcac-gccgtcggagtcgccggcggcggcgaggcgg 310 Query: 123 cgggacgacgatgaggaggagcggcgcaggtactacctcaacctcggctacgccatccgt 182 ||||| || || |||||||||||||| ||||||||||||||| | || ||||||||||| Sbjct: 311 cgggaggaggacgaggaggagcggcggaggtactacctcaacatggggtacgccatccgg 370 Query: 183 acgctcagggaggagattcccgacgtcttctacaaggagcccagcttcgatatatacag 241 ||||| ||||||||| | ||||| ||||||| |||||||||||||||||| || ||||| Sbjct: 371 acgctgagggaggagctccccgatgtcttctccaaggagcccagcttcgacatctacag 429
>ref|XM_507080.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1076_H08.5 mRNA Length = 903 Score = 97.6 bits (49), Expect = 4e-17 Identities = 283/361 (78%) Strand = Plus / Plus Query: 151 ggtactacctcaacctcggctacgccatccgtacgctcagggaggagattcccgacgtct 210 ||||| || ||||| |||| |||||||||| |||| |||||||| | |||| || | Sbjct: 329 ggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccccgccgcgt 388 Query: 211 tctacaaggagcccagcttcgatatatacagagatgatattgtcgtcagagaccctttca 270 ||||| ||||||||||||| |||| |||||||||||||||||| ||| ||| ||| ||| Sbjct: 389 tctaccgggagcccagcttccatatctacagagatgatattgtcttcaaagatcctatca 448 Query: 271 ataaatttgagggcattgacaattacaaaagtttattctggggattgcgctttactggac 330 |||| || ||| ||||| || |||||||| ||||||||| | || |||||||| | Sbjct: 449 ataatttcacgggtattgataactacaaaaggatattctgggctctacggtttactgggc 508 Query: 331 ggatcttcttcaaagcattatgggttgatatagttagtatatggcagcctgctgagaatc 390 || |||||||||||| ||||| | || || | || ||||||||||||| ||| || Sbjct: 509 aaattttcttcaaagcactatggatcgacattatcagcatatggcagcctgtcgaggatg 568 Query: 391 ttattatgattcgctggattgcccatggtattcctagggtcccatgggatggtcatgccc 450 | || ||||| |||||||||| |||||| |||||||| || | | |||||| | || | Sbjct: 569 taatcatgatccgctggattgtccatggcattcctagagttctctcggatggccctggca 628 Query: 451 gctttgacggcgcctccgtgtacaaactcgacaggaacgggaagatctatgagcacaagg 510 | ||||| ||| |||| | ||| || | |||| ||| ||||||||||||||||| |||| Sbjct: 629 gatttgaaggcacctcagagtataagtttgacaagaatgggaagatctatgagcataagg 688 Query: 511 t 511 | Sbjct: 689 t 689
>dbj|AK066642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073I22, full insert sequence Length = 1331 Score = 97.6 bits (49), Expect = 4e-17 Identities = 283/361 (78%) Strand = Plus / Plus Query: 151 ggtactacctcaacctcggctacgccatccgtacgctcagggaggagattcccgacgtct 210 ||||| || ||||| |||| |||||||||| |||| |||||||| | |||| || | Sbjct: 444 ggtaccacgtcaacgtcggggacgccatccgggcgctgcgggaggagctccccgccgcgt 503 Query: 211 tctacaaggagcccagcttcgatatatacagagatgatattgtcgtcagagaccctttca 270 ||||| ||||||||||||| |||| |||||||||||||||||| ||| ||| ||| ||| Sbjct: 504 tctaccgggagcccagcttccatatctacagagatgatattgtcttcaaagatcctatca 563 Query: 271 ataaatttgagggcattgacaattacaaaagtttattctggggattgcgctttactggac 330 |||| || ||| ||||| || |||||||| ||||||||| | || |||||||| | Sbjct: 564 ataatttcacgggtattgataactacaaaaggatattctgggctctacggtttactgggc 623 Query: 331 ggatcttcttcaaagcattatgggttgatatagttagtatatggcagcctgctgagaatc 390 || |||||||||||| ||||| | || || | || ||||||||||||| ||| || Sbjct: 624 aaattttcttcaaagcactatggatcgacattatcagcatatggcagcctgtcgaggatg 683 Query: 391 ttattatgattcgctggattgcccatggtattcctagggtcccatgggatggtcatgccc 450 | || ||||| |||||||||| |||||| |||||||| || | | |||||| | || | Sbjct: 684 taatcatgatccgctggattgtccatggcattcctagagttctctcggatggccctggca 743 Query: 451 gctttgacggcgcctccgtgtacaaactcgacaggaacgggaagatctatgagcacaagg 510 | ||||| ||| |||| | ||| || | |||| ||| ||||||||||||||||| |||| Sbjct: 744 gatttgaaggcacctcagagtataagtttgacaagaatgggaagatctatgagcataagg 803 Query: 511 t 511 | Sbjct: 804 t 804
>gb|AC108498.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1076_H08, complete sequence Length = 148348 Score = 65.9 bits (33), Expect = 1e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| ||||||| || ||| ||||| || ||||| Sbjct: 37305 cagagatgatattgtcttcaaagatcctatcaataatttcacgggtattgataactacaa 37364 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| | || |||||||| | || |||||||||||| ||||| | || Sbjct: 37365 aaggatattctgggctctacggtttactgggcaaattttcttcaaagcactatggatcga 37424 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 || | || ||||||||||||| ||| || | || ||||| |||||||||| |||||| Sbjct: 37425 cattatcagcatatggcagcctgtcgaggatgtaatcatgatccgctggattgtccatgg 37484 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||||| || | | |||||| | || | | ||||| ||| |||| | ||| || | Sbjct: 37485 cattcctagagttctctcggatggccctggcagatttgaaggcacctcagagtataagtt 37544 Query: 479 cgacaggaacgggaagatctatgagcacaaggt 511 |||| ||| ||||||||||||||||| ||||| Sbjct: 37545 tgacaagaatgggaagatctatgagcataaggt 37577
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 213/273 (78%) Strand = Plus / Plus Query: 239 cagagatgatattgtcgtcagagaccctttcaataaatttgagggcattgacaattacaa 298 |||||||||||||||| ||| ||| ||| ||||||| || ||| ||||| || ||||| Sbjct: 7082456 cagagatgatattgtcttcaaagatcctatcaataatttcacgggtattgataactacaa 7082515 Query: 299 aagtttattctggggattgcgctttactggacggatcttcttcaaagcattatgggttga 358 ||| ||||||||| | || |||||||| | || |||||||||||| ||||| | || Sbjct: 7082516 aaggatattctgggctctacggtttactgggcaaattttcttcaaagcactatggatcga 7082575 Query: 359 tatagttagtatatggcagcctgctgagaatcttattatgattcgctggattgcccatgg 418 || | || ||||||||||||| ||| || | || ||||| |||||||||| |||||| Sbjct: 7082576 cattatcagcatatggcagcctgtcgaggatgtaatcatgatccgctggattgtccatgg 7082635 Query: 419 tattcctagggtcccatgggatggtcatgcccgctttgacggcgcctccgtgtacaaact 478 |||||||| || | | |||||| | || | | ||||| ||| |||| | ||| || | Sbjct: 7082636 cattcctagagttctctcggatggccctggcagatttgaaggcacctcagagtataagtt 7082695 Query: 479 cgacaggaacgggaagatctatgagcacaaggt 511 |||| ||| ||||||||||||||||| ||||| Sbjct: 7082696 tgacaagaatgggaagatctatgagcataaggt 7082728 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 103 cgccggcggcgaccacgcggcgg 125 ||||||||||||||||||||||| Sbjct: 4967559 cgccggcggcgaccacgcggcgg 4967537
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 100 agtcgccggcggcgaccacgcggcgg 125 |||||||||||||||||||||||||| Sbjct: 25539973 agtcgccggcggcgaccacgcggcgg 25539998
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 100 agtcgccggcggcgaccacgcggcgg 125 |||||||||||||||||||||||||| Sbjct: 25468149 agtcgccggcggcgaccacgcggcgg 25468174
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 100 agtcgccggcggcgaccacgcggcgg 125 |||||||||||||||||||||||||| Sbjct: 109355 agtcgccggcggcgaccacgcggcgg 109380
>ref|XM_473869.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 846 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 478 tcgacaggaacgggaagatctatgagcacaa 508 ||||||||||||||||||| || |||||||| Sbjct: 581 tcgacaggaacgggaagatttacgagcacaa 611
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 103 cgccggcggcgaccacgcggcgg 125 ||||||||||||||||||||||| Sbjct: 62144 cgccggcggcgaccacgcggcgg 62122
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 478 tcgacaggaacgggaagatctatgagcacaa 508 ||||||||||||||||||| || |||||||| Sbjct: 112314 tcgacaggaacgggaagatttacgagcacaa 112284
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 478 tcgacaggaacgggaagatctatgagcacaa 508 ||||||||||||||||||| || |||||||| Sbjct: 31130233 tcgacaggaacgggaagatttacgagcacaa 31130203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcggagtcgccggcggcg 113 |||||||||||||||||||| Sbjct: 24377614 cctcggagtcgccggcggcg 24377633 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gtcgccggcggcgaccacgcggcg 124 ||||||||||||||| |||||||| Sbjct: 24024952 gtcgccggcggcgacgacgcggcg 24024975
>dbj|AK065653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037F04, full insert sequence Length = 1295 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 478 tcgacaggaacgggaagatctatgagcacaa 508 ||||||||||||||||||| || |||||||| Sbjct: 784 tcgacaggaacgggaagatttacgagcacaa 814
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 540 aagtacaaggtcctgtctgttca 562 ||||||||||||||||||||||| Sbjct: 67663 aagtacaaggtcctgtctgttca 67641
>ref|NM_192118.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 gggacgacgatgaggaggagcggcgc 149 |||||||||| ||||||||||||||| Sbjct: 178 gggacgacgacgaggaggagcggcgc 153
>emb|CR555290.8| Zebrafish DNA sequence from clone DKEYP-10A10 in linkage group 10, complete sequence Length = 83568 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 339 ttcaaagcattatgggttgata 360 |||||||||||||||||||||| Sbjct: 41784 ttcaaagcattatgggttgata 41763
>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 5/7 Length = 329861 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcagg 152 |||||||||||||||||||||| Sbjct: 264693 cgatgaggaggagcggcgcagg 264672
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 gggacgacgatgaggaggagcggcgc 149 |||||||||| ||||||||||||||| Sbjct: 140685 gggacgacgacgaggaggagcggcgc 140660
>dbj|AK111204.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-E08, full insert sequence Length = 1207 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 gggacgacgatgaggaggagcggcgc 149 |||||||||| ||||||||||||||| Sbjct: 336 gggacgacgacgaggaggagcggcgc 311
>gb|AY107152.1| Zea mays PCO111123 mRNA sequence Length = 686 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 478 tcgacaggaacgggaagatctatgagcaca 507 |||||||||||||||| ||||| ||||||| Sbjct: 233 tcgacaggaacgggaaaatctacgagcaca 262
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3313156 cgatgaggaggagcggcgcag 3313136 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3186482 cgatgaggaggagcggcgcag 3186462 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3186429 cgatgaggaggagcggcgcag 3186409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3186376 cgatgaggaggagcggcgcag 3186356 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 2529389 cgatgaggaggagcggcgcag 2529369 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 2529230 cgatgaggaggagcggcgcag 2529210 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 2529177 cgatgaggaggagcggcgcag 2529157 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 1625268 cgatgaggaggagcggcgcag 1625248 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 2455782 cgatgaggaggagcggcgca 2455801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 267899 cgatgaggaggagcggcgca 267880
>gb|AC084158.2| Caenorhabditis elegans cosmid Y69A2AR, complete sequence Length = 188616 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 46 tgccggtgccggcgcctccgccgctcttc 74 |||||| |||||||||||||||| ||||| Sbjct: 68081 tgccggcgccggcgcctccgccggtcttc 68109
>gb|BC037306.1| Homo sapiens CD47 molecule, mRNA (cDNA clone MGC:33903 IMAGE:5260986), complete cds Length = 5024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 cggcggcgaccacgcggcggg 126 ||||||||||||||||||||| Sbjct: 90 cggcggcgaccacgcggcggg 110
>emb|AL590550.8| Human DNA sequence from clone RP11-398B19 on chromosome 6, complete sequence Length = 60406 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 285 attgacaattacaaaagttta 305 ||||||||||||||||||||| Sbjct: 46191 attgacaattacaaaagttta 46211
>gb|CP000318.1| Polaromonas sp. JS666 plasmid 2, complete sequence Length = 338007 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 tcggagtcgccggcggcgaccacgcggcg 124 |||| ||||||| |||||||||||||||| Sbjct: 36109 tcggtgtcgccgccggcgaccacgcggcg 36137
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 199799 cgatgaggaggagcggcgcag 199779 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 73291 cgatgaggaggagcggcgcag 73271 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 73238 cgatgaggaggagcggcgcag 73218 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 73185 cgatgaggaggagcggcgcag 73165
>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13 Length = 348247 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 107344 cgatgaggaggagcggcgcag 107324 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 107132 cgatgaggaggagcggcgcag 107112 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 107079 cgatgaggaggagcggcgcag 107059 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 33609 cgatgaggaggagcggcgca 33628
>emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome; segment 5/13 Length = 348264 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 242343 cgatgaggaggagcggcgcag 242323
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 150525 cgatgaggaggagcggcgcag 150505 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 23843 cgatgaggaggagcggcgcag 23823 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 23790 cgatgaggaggagcggcgcag 23770 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 23737 cgatgaggaggagcggcgcag 23717
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 139 cgatgaggaggagcggcgcag 119
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 305980 cgatgaggaggagcggcgcag 305960 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 232481 cgatgaggaggagcggcgca 232500
>emb|BX248339.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 6/14 Length = 300050 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 7733 cgatgaggaggagcggcgcag 7713
>gb|U00024.1|MTU00024 Mycobacterium tuberculosis cosmid tbc2 Length = 31175 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 5769 cgatgaggaggagcggcgcag 5789
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3253785 cgatgaggaggagcggcgcag 3253765 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3253732 cgatgaggaggagcggcgcag 3253712 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 3253679 cgatgaggaggagcggcgcag 3253659 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 1082477 cgatgaggaggagcggcgcag 1082497 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 4020772 cgatgaggaggagcggcgca 4020791 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 3241431 cgatgaggaggagcggcgca 3241412 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgatgaggaggagcggcgc 149 |||||||||||||||||||| Sbjct: 820715 acgatgaggaggagcggcgc 820696
>gb|AD000009.1|MSGY2 Mycobacterium tuberculosis sequence from clone y2 Length = 31176 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgcag 151 ||||||||||||||||||||| Sbjct: 5769 cgatgaggaggagcggcgcag 5789
>ref|NM_188240.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2019 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tacagagatgatattgtcgt 256 |||||||||||||||||||| Sbjct: 169 tacagagatgatattgtcgt 150
>ref|XM_510200.1| PREDICTED: Pan troglodytes similar to mKIAA0284 protein (LOC453204), mRNA Length = 1030 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 181 ggacgacgatgaggaggagc 200
>ref|NM_015124.2| Homo sapiens death-inducing-protein (DIP), mRNA Length = 4316 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aagtacaaggtcctgtctgt 559 |||||||||||||||||||| Sbjct: 1600 aagtacaaggtcctgtctgt 1619
>ref|XM_472908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1530 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gtcgccggcggcgaccacgcggcg 124 ||||||||||||||| |||||||| Sbjct: 1029 gtcgccggcggcgacgacgcggcg 1006
>ref|NM_015005.1| Homo sapiens KIAA0284 (KIAA0284), mRNA Length = 6568 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 3899 ggacgacgatgaggaggagc 3918
>gb|BC112928.1| Homo sapiens KIAA0284, mRNA (cDNA clone MGC:131679 IMAGE:6141521), complete cds Length = 6701 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 4039 ggacgacgatgaggaggagc 4058
>gb|BT010120.1| Drosophila melanogaster AT24152 full insert cDNA Length = 3234 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2066 ggacgacgatgaggaggagc 2085
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ccggcggcgaccacgcggcg 124 |||||||||||||||||||| Sbjct: 2449026 ccggcggcgaccacgcggcg 2449007
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 267785 cgatgaggaggagcggcgca 267766
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 90 ccggcctcggagtcgccggcggcg 113 |||||||||| ||||||||||||| Sbjct: 325923 ccggcctcggtgtcgccggcggcg 325900
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ccggcctcggagtcgccggcggcg 113 |||||||||| ||||||||||||| Sbjct: 258981 ccggcctcggtgtcgccggcggcg 259004
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 ccggcctcggagtcgccggcggcg 113 |||||||||| ||||||||||||| Sbjct: 284711 ccggcctcggtgtcgccggcggcg 284734
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 266109 cgatgaggaggagcggcgca 266090
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gtcgccggcggcgaccacgcggcg 124 ||||||||||||||| |||||||| Sbjct: 21931 gtcgccggcggcgacgacgcggcg 21954
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 cctcggagtcgccggcggcg 113 |||||||||||||||||||| Sbjct: 94025 cctcggagtcgccggcggcg 94044
>gb|AC104510.6| Drosophila melanogaster X BAC RP98-26J12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168583 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 51790 ggacgacgatgaggaggagc 51771
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 74972 ggacgacgatgaggaggagc 74991
>dbj|AK091980.1| Homo sapiens cDNA FLJ34661 fis, clone KIDNE2018989, weakly similar to Homo sapiens mRNA for KARP-1-binding protein 2 (KAB2) Length = 2484 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 1644 ggacgacgatgaggaggagc 1663
>gb|AC152170.4| Ornithorhynchus anatinus BAC clone OABb-47A1 from chromosome unknown, complete sequence Length = 151943 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 cggcgggacgacgatgaggaggag 143 |||||||||||||| ||||||||| Sbjct: 25014 cggcgggacgacgaggaggaggag 25037
>ref|NM_168135.1| Drosophila melanogaster mule CG5505-RB, transcript variant B (mule), mRNA Length = 3515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2369 ggacgacgatgaggaggagc 2388
>ref|NM_168134.1| Drosophila melanogaster mule CG5505-RC, transcript variant C (mule), mRNA Length = 3214 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2068 ggacgacgatgaggaggagc 2087
>ref|NM_168133.1| Drosophila melanogaster mule CG5505-RF, transcript variant F (mule), mRNA Length = 3355 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2068 ggacgacgatgaggaggagc 2087
>ref|NM_168132.1| Drosophila melanogaster mule CG5505-RD, transcript variant D (mule), mRNA Length = 3994 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2848 ggacgacgatgaggaggagc 2867
>ref|NM_168131.1| Drosophila melanogaster mule CG5505-RA, transcript variant A (mule), mRNA Length = 4135 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2848 ggacgacgatgaggaggagc 2867
>ref|NM_139729.2| Drosophila melanogaster mule CG5505-RE, transcript variant E (mule), mRNA Length = 3656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2369 ggacgacgatgaggaggagc 2388
>ref|NM_132457.1| Drosophila melanogaster CG11122-RA (CG11122), mRNA Length = 11076 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 5034 ggacgacgatgaggaggagc 5053
>gb|BC080189.1| Homo sapiens death-inducing-protein, mRNA (cDNA clone IMAGE:6013758), complete cds Length = 2843 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aagtacaaggtcctgtctgt 559 |||||||||||||||||||| Sbjct: 226 aagtacaaggtcctgtctgt 245
>gb|AY051916.1| Drosophila melanogaster LD40339 full length cDNA Length = 3515 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2369 ggacgacgatgaggaggagc 2388
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 tgccggtgccggcgcctccgccgc 69 |||||||||||| ||||||||||| Sbjct: 21371198 tgccggtgccggagcctccgccgc 21371221
>dbj|AB006622.3| Homo sapiens mRNA for KIAA0284 protein, partial cds Length = 6677 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 4035 ggacgacgatgaggaggagc 4054
>dbj|AB018310.2| Homo sapiens mRNA for KIAA0767 protein, partial cds Length = 4481 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aagtacaaggtcctgtctgt 559 |||||||||||||||||||| Sbjct: 1774 aagtacaaggtcctgtctgt 1793
>emb|BX936111.1| Gallus gallus finished cDNA, clone ChEST485a20 Length = 914 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 548 ggacgacgatgaggaggagc 567
>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498B01 Length = 146812 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 tacagagatgatattgtcgt 256 |||||||||||||||||||| Sbjct: 94490 tacagagatgatattgtcgt 94471
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctccgccgctcttctccgt 79 |||||||||||||||||||| Sbjct: 2381263 cctccgccgctcttctccgt 2381244
>gb|BT004507.1| Drosophila melanogaster AT31021 full insert cDNA Length = 4014 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 2847 ggacgacgatgaggaggagc 2866
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 tgccggtgccggcgcctccgccgc 69 |||||||||||| ||||||||||| Sbjct: 15254 tgccggtgccggagcctccgccgc 15277
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 tgccggtgccggcgcctccgccgc 69 |||||||||||| ||||||||||| Sbjct: 91366 tgccggtgccggagcctccgccgc 91389
>dbj|AK121175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023082O06, full insert sequence Length = 1733 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 gtcgccggcggcgaccacgcggcg 124 ||||||||||||||| |||||||| Sbjct: 1088 gtcgccggcggcgacgacgcggcg 1065
>dbj|AK069116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C24, full insert sequence Length = 2768 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 cctcggagtcgccggcggcg 113 |||||||||||||||||||| Sbjct: 133 cctcggagtcgccggcggcg 114
>dbj|AK063679.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E04, full insert sequence Length = 737 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 gtcgccggcggcgaccacgcggcg 124 ||||||||||||||| |||||||| Sbjct: 415 gtcgccggcggcgacgacgcggcg 438
>gb|AY108745.1| Zea mays PCO063072 mRNA sequence Length = 820 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 tgccggtgccggcgcctccgccgc 69 |||||||||||| ||||||||||| Sbjct: 158 tgccggtgccggtgcctccgccgc 135
>emb|CR456470.1| Homo sapiens dJ439F8.1 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.dJ439F8.1) Length = 1909 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 aagtacaaggtcctgtctgt 559 |||||||||||||||||||| Sbjct: 1600 aagtacaaggtcctgtctgt 1619
>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete sequence Length = 284268 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 244209 ggacgacgatgaggaggagc 244228
>gb|AE003485.3| Drosophila melanogaster chromosome X, section 37 of 74 of the complete sequence Length = 283075 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 31983 ggacgacgatgaggaggagc 31964
>emb|AM167524.1| Mycobacterium tuberculosis variable number tandem repeat sequence, isolate 00-46639 Length = 277 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acgatgaggaggagcggcgc 149 |||||||||||||||||||| Sbjct: 143 acgatgaggaggagcggcgc 162
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gacgacgatgaggaggagcg 145 |||||||||||||||||||| Sbjct: 348169 gacgacgatgaggaggagcg 348188
>gb|AD000006.1|MSGY140 Mycobacterium tuberculosis sequence from clone y140 Length = 40806 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgatgaggaggagcggcgca 150 |||||||||||||||||||| Sbjct: 29226 cgatgaggaggagcggcgca 29245
>emb|AL583810.5|CNS07EFZ Human chromosome 14 DNA sequence BAC C-3051D23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 94227 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggacgacgatgaggaggagc 144 |||||||||||||||||||| Sbjct: 53623 ggacgacgatgaggaggagc 53642 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,931,249 Number of Sequences: 3902068 Number of extensions: 3931249 Number of successful extensions: 80869 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79685 Number of HSP's gapped (non-prelim): 1171 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)