Clone Information

BLAST Search Result

Clone Name	baal1k20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	56	7e-08
2	MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	52	8e-07
3	MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN doma...	46	8e-05
4	SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated a...	45	2e-04
5	SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dep...	43	7e-04
6	SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dep...	43	7e-04
7	RCOR1_XENLA (Q90WN5) REST corepressor 1 (Protein CoREST) (xCoREST)	40	0.003
8	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	39	0.009
9	SMRC2_MOUSE (Q6PDG5) SWI/SNF-related matrix-associated actin-dep...	39	0.009
10	RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)	38	0.021
11	RCOR1_MOUSE (Q8CFE3) REST corepressor 1 (Protein CoREST)	38	0.021
12	YEPA_SCHPO (O14470) Putative chromatin regulator protein C23H3.10	37	0.027
13	RCOR2_BRARE (Q6P116) REST corepressor 2	37	0.036
14	BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1	37	0.047
15	NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Si...	37	0.047
16	CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1	37	0.047
17	MYBH_DICDI (P34127) Myb-like protein (Fragment)	36	0.080
18	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	35	0.14
19	NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-...	35	0.18
20	NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-...	35	0.18
21	RCOR2_HUMAN (Q8IZ40) REST corepressor 2	34	0.23
22	MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)	33	0.52
23	RCOR3_HUMAN (Q9P2K3) REST corepressor 3	33	0.52
24	RCOR2_RAT (Q5FWT8) REST corepressor 2	33	0.52
25	RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)	33	0.52
26	CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-l...	33	0.52
27	CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5...	33	0.52
28	CDC5L_HUMAN (Q99459) Cell division cycle 5-like protein (Cdc5-li...	33	0.52
29	MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)	33	0.52
30	MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)	33	0.67
31	MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)	33	0.67
32	MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)	33	0.67
33	RCOR2_XENLA (Q6NRZ0) REST corepressor 2	33	0.67
34	MYB_XENLA (Q08759) Myb protein	33	0.67
35	MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)	33	0.67
36	CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1	32	0.88
37	MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related p...	32	0.88
38	RSC8_YEAST (P43609) Chromatin structure remodeling complex prote...	32	1.1
39	MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)	32	1.1
40	MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-r...	32	1.5
41	CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1	32	1.5
42	MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)	32	1.5
43	CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1	32	1.5
44	CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1	32	1.5
45	MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)	32	1.5
46	MYB_AVIMB (P01104) Transforming protein Myb	31	2.0
47	MYBA_CHICK (P52550) Myb-related protein A (A-Myb)	31	2.0
48	CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division...	31	2.0
49	SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ...	31	2.6
50	CEF1_MAGGR (Q52G60) Pre-mRNA-splicing factor CEF1	31	2.6
51	MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related pro...	31	2.6
52	CASQ2_MOUSE (O09161) Calsequestrin-2 precursor (Calsequestrin, c...	31	2.6
53	RCOR_CAEEL (Q18919) REST corepressor spr-1 (CoREST) (Suppressor ...	31	2.6
54	CB013_HUMAN (Q8IW19) Protein C2orf13	31	2.6
55	MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like ...	31	2.6
56	MMP1_RABIT (P13943) Interstitial collagenase precursor (EC 3.4.2...	30	4.4
57	YMA9_CAEEL (P34454) Hypothetical protein F54F2.9	30	4.4
58	CEF1_NEUCR (Q7SAF6) Pre-mRNA-splicing factor cef-1	30	5.7
59	APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2...	30	5.7
60	ARR19_ARATH (Q9M9B9) Putative two-component response regulator A...	30	5.7
61	CEF1_CRYNE (Q5K9L1) Pre-mRNA-splicing factor CEF1	29	7.5
62	ABP1_YEAST (P15891) Actin-binding protein	29	7.5
63	MTA3_HUMAN (Q9BTC8) Metastasis-associated protein MTA3	29	9.7
64	MIER1_CHICK (Q5ZKT9) Mesoderm induction early response protein 1...	29	9.7
65	CEF1_USTMA (Q4P652) Pre-mRNA-splicing factor CEF1	29	9.7
66	Y2093_MYCBO (P0A5G2) Hypothetical protein Mb2093c	29	9.7
67	Y2067_MYCTU (P0A5G1) Hypothetical protein Rv2067c/MT2127	29	9.7
68	EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 1...	29	9.7

>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 832

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 25/66 (37%), Positives = 41/66 (62%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           S T+  S   KWT EE E F + L  YGR W +I + IG++T +Q++S+A+++F    + 
Sbjct: 111 SPTKPGSYSLKWTSEEKELFEQGLVKYGRRWTKIAKLIGSRTVLQVKSYARQYFKNKAKN 170

Query: 246 PGAKIE 263
            G++ E
Sbjct: 171 DGSERE 176

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>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 828

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 23/59 (38%), Positives = 38/59 (64%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 242
           S T+  S   KWT EE E F + L  +GR W +I + IG++T +Q++S+A+++F   V+
Sbjct: 110 SPTKPASYSVKWTIEEKELFEQGLAKFGRRWTKISKLIGSRTVLQVKSYARQYFKNKVK 168

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>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing|
           protein 1)
          Length = 819

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 20/59 (33%), Positives = 35/59 (59%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 242
           S  +  S   KWT EE E F + L  +GR W +I   + ++T +Q++S+A+++F   V+
Sbjct: 107 SPAKPASHSVKWTVEEKELFEQGLAKFGRRWTKIATLLKSRTVLQVKSYARQYFKNKVK 165

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>SMCL_ARATH (Q8VY05) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member (AtSwi3C)
          Length = 985

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 212
           KWTD+E    LEAL+++  +W +I EH+ TKT  Q   H
Sbjct: 366 KWTDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLH 404

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>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 1 (SWI/SNF
           complex 155 kDa subunit) (BRG1-associated factor 155)
          Length = 1105

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +3

Query: 72  TRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 191
           ++  S+G +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 614 SKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 653

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>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 1 (SWI/SNF
           complex 155 kDa subunit) (BRG1-associated factor 155)
           (SWI3-related protein)
          Length = 1104

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 15/40 (37%), Positives = 28/40 (70%)
 Frame = +3

Query: 72  TRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 191
           ++  S+G +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 613 SKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 652

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>RCOR1_XENLA (Q90WN5) REST corepressor 1 (Protein CoREST) (xCoREST)|
          Length = 431

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 16/44 (36%), Positives = 29/44 (65%)
 Frame = +3

Query: 78  SQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           SQ    +WT EE    ++A+++YGR ++ I + IG K+ VQ+++
Sbjct: 325 SQKFNARWTTEEQLLAVQAIRMYGRDFQAISDVIGNKSVVQVKN 368

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +3

Query: 84  SSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 191
           S+  +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 596 SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 631

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>SMRC2_MOUSE (Q6PDG5) SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily C member 2 (SWI/SNF
           complex 170 kDa subunit) (BRG1-associated factor 170)
          Length = 1213

 Score = 38.9 bits (89), Expect = 0.009
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +3

Query: 84  SSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKT 191
           S+  +WT++E    LEAL++Y   W ++ EH+G++T
Sbjct: 596 SATREWTEQETLLLLEALEMYKDDWNKVSEHVGSRT 631

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>RCOR1_HUMAN (Q9UKL0) REST corepressor 1 (Protein CoREST)|
          Length = 482

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 81  QSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           Q    +WT EE    ++A++ YGR ++ I + IG K+ VQ+++
Sbjct: 377 QKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN 419

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>RCOR1_MOUSE (Q8CFE3) REST corepressor 1 (Protein CoREST)|
          Length = 477

 Score = 37.7 bits (86), Expect = 0.021
 Identities = 15/43 (34%), Positives = 27/43 (62%)
 Frame = +3

Query: 81  QSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           Q    +WT EE    ++A++ YGR ++ I + IG K+ VQ+++
Sbjct: 371 QKCNARWTTEEQLLAVQAIRKYGRDFQAISDVIGNKSVVQVKN 413

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>YEPA_SCHPO (O14470) Putative chromatin regulator protein C23H3.10|
          Length = 503

 Score = 37.4 bits (85), Expect = 0.027
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 212
           W+++E    LEA++ YG  W QI  H+G++T  Q   H
Sbjct: 250 WSNQETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIH 287

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>RCOR2_BRARE (Q6P116) REST corepressor 2|
          Length = 536

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
 Frame = +3

Query: 78  SQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIR----SHAQKF-FSKVVR 242
           +Q    +WT EE    ++A++ YG+ +  I + IG KT  Q+     S+ ++F   +V+R
Sbjct: 326 NQKINSRWTTEEQLLAVQAVRRYGKDFAAIADVIGNKTVAQVSSFFVSYRRRFNLEEVLR 385

Query: 243 EPGAKIEIE 269
           E  A+ E++
Sbjct: 386 EWQAEQEVQ 394

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>BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1|
          Length = 811

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 14/91 (15%)
 Frame = +3

Query: 30  GRGWVSILSSLGSHTRSQSS---------GXK-----WTDEEHEKFLEALKLYGRSWRQI 167
           G  W+SI   +   T  Q +         G K     WT EE    +  +K YG  WR+I
Sbjct: 135 GPHWLSISMDIPGRTEDQCAKRYIEVLGPGSKGRLREWTLEEDLNLISKVKAYGTKWRKI 194

Query: 168 QEHIGTKTAVQIRSHAQKFFSKVVREPGAKI 260
              +  + ++  R+  +K  + VVR   +++
Sbjct: 195 SSEMEFRPSLTCRNRWRKIITMVVRGQASEV 225

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>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC)
          Length = 2472

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = +3

Query: 54  SSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           S L S   ++SS  +WT+EE E   + L  +GR+W  I   +G+KT  Q ++
Sbjct: 598 SELASMEMNESS--RWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKN 647

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>CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1|
          Length = 610

 Score = 36.6 bits (83), Expect = 0.047
 Identities = 24/65 (36%), Positives = 30/65 (46%)
 Frame = +3

Query: 39  WVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQ 218
           WV  LS L + T        WT EE EK L   K++   WR I  +I  +TAVQ     Q
Sbjct: 51  WVEYLSPLLNKT-------DWTKEEDEKLLNLHKIFPNQWRSI-SNILNRTAVQCVERYQ 102

Query: 219 KFFSK 233
           K   +
Sbjct: 103 KLIDE 107

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>MYBH_DICDI (P34127) Myb-like protein (Fragment)|
          Length = 451

 Score = 35.8 bits (81), Expect = 0.080
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQK 221
           KWT EE +  ++A+ L+  ++W++I EH   +T VQ     QK
Sbjct: 151 KWTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDVQCHHRYQK 193



 Score = 29.6 bits (65), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIR 206
           WT +E +K +E +K YG + W  I  H+  +   Q R
Sbjct: 204 WTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCR 240

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +3

Query: 54  SSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           + L S   ++SS  +WT+EE E   + L  +GR+W  I   +G+KT  Q ++
Sbjct: 602 AELASMELNESS--RWTEEEMETAKKGLLEHGRNWSAIARMVGSKTVSQCKN 651

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>NCOR1_MOUSE (Q60974) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (Retinoid|
           X receptor-interacting protein 13) (RIP13)
          Length = 2453

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +WT+EE E   + L  +GR+W  I + +GTK+  Q ++
Sbjct: 626 RWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKN 663

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>NCOR1_HUMAN (O75376) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR)|
          Length = 2440

 Score = 34.7 bits (78), Expect = 0.18
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +WT+EE E   + L  +GR+W  I + +GTK+  Q ++
Sbjct: 627 RWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKN 664

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>RCOR2_HUMAN (Q8IZ40) REST corepressor 2|
          Length = 523

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 13/71 (18%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIR----SHAQKF-FSKVVRE----- 245
           +WT +E    ++A++ YG+ +  I E IG KT  Q++    S+ ++F   +V++E     
Sbjct: 331 RWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQ 390

Query: 246 ---PGAKIEIE 269
              PGA + +E
Sbjct: 391 DGAPGAPVPME 401

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>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)|
          Length = 752

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +H   +     WT+EE     EA K  G  W +I + +  +T   I++H      + V +
Sbjct: 131 NHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190

Query: 246 PG 251
            G
Sbjct: 191 EG 192

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>RCOR3_HUMAN (Q9P2K3) REST corepressor 3|
          Length = 495

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +3

Query: 78  SQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +Q    +WT EE    ++ ++ YG+ ++ I + IG KT  Q+++
Sbjct: 283 NQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKN 326

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>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +WT +E    ++A++ YG+ +  I E IG KT  Q+++
Sbjct: 331 RWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKT 368

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>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +WT +E    ++A++ YG+ +  I E IG KT  Q+++
Sbjct: 331 RWTTDEQLLAVQAIRRYGKDFGAIAEVIGNKTLTQVKT 368

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>CDC5L_RAT (O08837) Cell division cycle 5-related protein (Cdc5-like protein)|
           (Pombe Cdc5-related protein)
          Length = 802

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 242
           +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 62  EWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKTAQ 109

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>CDC5L_MOUSE (Q6A068) Cell division cycle 5-related protein (Cdc5-like protein)|
          Length = 802

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 242
           +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 62  EWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKTAQ 109

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>CDC5L_HUMAN (Q99459) Cell division cycle 5-like protein (Cdc5-like protein)|
           (Pombe cdc5-related protein)
          Length = 802

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVR 242
           +W+ EE EK L   KL    WR I   IG +TA Q   H +    K  +
Sbjct: 62  EWSREEEEKLLHLAKLMPTQWRTIAPIIG-RTAAQCLEHYEFLLDKAAQ 109

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>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)|
          Length = 751

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +H   +     WT+EE     EA K  G  W +I + +  +T   I++H      + V +
Sbjct: 131 NHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190

Query: 246 PG 251
            G
Sbjct: 191 EG 192

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>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)|
          Length = 636

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W V  +   GR          +H   +     WT+EE     +A K  G  W +I + + 
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 174

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   I++H      + V + G
Sbjct: 175 GRTDNAIKNHWNSTMRRKVEQEG 197

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>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W V  +   GR          +H   +     WT+EE     +A K  G  W +I + + 
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 174

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   I++H      + V + G
Sbjct: 175 GRTDNAIKNHWNSTMRRKVEQEG 197

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>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W V  +   GR          +H   +     WT+EE     +A K  G  W +I + + 
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 174

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   I++H      + V + G
Sbjct: 175 GRTDNAIKNHWNSTMRRKVEQEG 197

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>RCOR2_XENLA (Q6NRZ0) REST corepressor 2|
          Length = 503

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRS 209
           +WT +E    ++A++ YG+ ++ I E +G KT  Q+++
Sbjct: 331 RWTTDEQLLAVQAVRKYGKDFQAISEVLGNKTPSQVKT 368

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>MYB_XENLA (Q08759) Myb protein|
          Length = 624

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 18/70 (25%), Positives = 28/70 (40%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W V  +   GR          +H   +     WT+EE     EA K  G  W +I + + 
Sbjct: 112 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLP 171

Query: 183 TKTAVQIRSH 212
            +T   I++H
Sbjct: 172 GRTDNAIKNH 181

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>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)|
          Length = 641

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 19/83 (22%), Positives = 32/83 (38%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W V  +   GR          +H   +     WT+EE     +A K  G  W +I + + 
Sbjct: 115 WSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLP 174

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   I++H      + V + G
Sbjct: 175 GRTDNAIKNHWNSTMRRKVEQEG 197

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>CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1|
          Length = 719

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +W+ EE EK L   K++   WR I   +G +TA Q     ++  ++V  E
Sbjct: 60  EWSREEDEKLLHLAKIFPAQWRTIAPFVG-RTAHQCIQRYERLLAEVAGE 108

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>MYBB_XENLA (P52551) Myb-related protein B (B-Myb) (Myb-related protein 1)|
           (XMYB1)
          Length = 743

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 14/92 (15%)
 Frame = +3

Query: 12  AMQPNXGRG-WVSILSSLGSHTRSQSSGX------------KWTDEEHEKFLEALKLYG- 149
           A+    G+G W +I S+L + T  Q                 WT EE EK +E +K YG 
Sbjct: 44  ALVKKHGQGEWKTIASNLNNRTEQQCQHRWLRVLHPDLVKGPWTKEEDEKVIELVKKYGT 103

Query: 150 RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           + W  I + +  +   Q R       +  V++
Sbjct: 104 KHWTLIAKQLRGRMGKQCRERWHNHLNPEVKK 135



 Score = 32.0 bits (71), Expect = 1.1
 Identities = 17/83 (20%), Positives = 32/83 (38%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W +  +   GR          +H   +     WT+EE     +A K+ G  W +I + + 
Sbjct: 106 WTLIAKQLRGRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLP 165

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   +++H      + V   G
Sbjct: 166 GRTDNAVKNHWNSTIKRKVETGG 188

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>RSC8_YEAST (P43609) Chromatin structure remodeling complex protein RSC8|
           (Remodel the structure of chromatin complex subunit 8)
           (SWI3 homolog)
          Length = 557

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           W+D+E    LE +++Y   W +I +H+G    V+     +KF S  + +
Sbjct: 315 WSDQEMLLLLEGIEMYEDQWEKIADHVGGHKRVE--DCIEKFLSLPIED 361

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>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)|
          Length = 686

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 212
           +H   +     WT+EE     EA K+ G  W +I + +  +T   +++H
Sbjct: 127 NHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNH 175



 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135

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>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein|
           2) (XMYB2)
          Length = 728

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/83 (21%), Positives = 30/83 (36%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W +  +   GR          +H         WT+EE      A K  G  W +I + + 
Sbjct: 109 WSIIAKHLKGRIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLP 168

Query: 183 TKTAVQIRSHAQKFFSKVVREPG 251
            +T   I++H      + V + G
Sbjct: 169 GRTDNSIKNHWNSTMKRKVEQEG 191

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>CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1|
          Length = 668

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 221
           +WT EE EK L   KL    WR I   IG +TA       QK
Sbjct: 62  EWTREEDEKLLSLAKLLPNQWRSIAPIIG-RTATHCVERYQK 102

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>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)|
          Length = 700

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135



 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 212
           +H   +     WT+EE     EA K+ G  W +I + +  +T   +++H
Sbjct: 127 NHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNH 175

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>CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1|
          Length = 791

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 233
           +W+ EE EK L   KL    WR I   +G +TA Q     QK   +
Sbjct: 60  EWSREEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQKLLDE 104

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>CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1|
          Length = 792

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 233
           +W+ EE EK L   KL    WR I   +G +TA Q     QK   +
Sbjct: 60  EWSREEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQKLLDE 104

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>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)|
          Length = 704

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYG-RSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           WT EE +K +E +K YG + W  I +H+  +   Q R       +  V++
Sbjct: 86  WTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKK 135



 Score = 31.2 bits (69), Expect = 2.0
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +H   +     WT+EE     EA K+ G  W +I + +  +T   +++H      + V  
Sbjct: 127 NHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDT 186

Query: 246 PGAKIE 263
            G   E
Sbjct: 187 GGFPAE 192

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>MYB_AVIMB (P01104) Transforming protein Myb|
          Length = 382

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 14/62 (22%), Positives = 27/62 (43%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +H   +     WT+EE     +A K  G  W +I + +  +T   +++H      + V +
Sbjct: 65  NHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQ 124

Query: 246 PG 251
            G
Sbjct: 125 EG 126

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>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)|
          Length = 757

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVRE 245
           +H   +     WT+ E     EA K  G  W +I + +  +T   I++H      + V +
Sbjct: 131 NHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQ 190

Query: 246 PG 251
            G
Sbjct: 191 EG 192

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>CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division control|
           protein 5)
          Length = 757

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 221
           +W+ EE EK L   KL    WR I   +G +TA Q     QK
Sbjct: 60  EWSREEDEKLLHLAKLLPTQWRTIAPIVG-RTATQCLERYQK 100

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>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
           (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
           (SH3P12)
          Length = 1290

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = +1

Query: 151 GPGVRYKNTLAQRPLSKSEAMPRSFSPRWCANPELKLRSRSLPL-GQRGSRCIHILASVR 327
           GPG ++K  L+      SE +P  F PR  A   L    +S+ L  ++   C ++  S+ 
Sbjct: 504 GPGCKHKKPLSAAKACISEILPSKFKPRLSAPSALLQEQKSVLLPSEKAQSCENLCVSLN 563

Query: 328 TPATG 342
               G
Sbjct: 564 DSKRG 568

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>CEF1_MAGGR (Q52G60) Pre-mRNA-splicing factor CEF1|
          Length = 773

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSKVVREPGA 254
           +W+ +E EK L   KL    WR I   +G +TA Q     QK   +  ++  A
Sbjct: 60  EWSKDEDEKLLHLAKLMPTQWRTIAPIVG-RTANQCLERYQKLLDEAEQKEAA 111

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>MYB98_ARATH (Q9S7L2) Transcription factor MYB98 (Myb-related protein 98)|
           (AtMYB98)
          Length = 427

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = +3

Query: 66  SHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSH 212
           +H R       W++EE    +E  K  G  W +I + +  +T   I++H
Sbjct: 261 NHLRPDIKKETWSEEEDRVLIEFHKEIGNKWAEIAKRLPGRTENSIKNH 309

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>CASQ2_MOUSE (O09161) Calsequestrin-2 precursor (Calsequestrin, cardiac muscle|
           isoform)
          Length = 415

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -3

Query: 514 SSSDDSGEVLRDDGFDIDDPKASDCIADNTDTGEPFSWSEPEDDE 380
           ++ DD  E   DDG D DD    D   DN+D     S  + +DDE
Sbjct: 371 NTEDDDNEDEDDDGDDNDDDDDDDDDNDNSDEDNEDSDDDDDDDE 415

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>RCOR_CAEEL (Q18919) REST corepressor spr-1 (CoREST) (Suppressor of presenilin|
           1)
          Length = 558

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +3

Query: 60  LGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQI 203
           L SH R   S   WT  E  + +    +YG  +  I + IGTKT  Q+
Sbjct: 474 LFSHDRVHYS-QDWTQLERSQVIRCFNMYGAHFEHIADVIGTKTPDQV 520

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>CB013_HUMAN (Q8IW19) Protein C2orf13|
          Length = 511

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
 Frame = +1

Query: 157 GVRYKNTLAQRPLSKSEAMPRSFSPRWCANPEL-----KLRSRSLPLGQRGSRCIHILAS 321
           G   KNT  +     S+ MP+SFS    +N E+       +   LP+ + G    H +A+
Sbjct: 252 GEECKNTDQEESTISSKEMPQSFSAITLSNTEMNNIKTNAQRNKLPIEELGKVSKHKIAT 311

Query: 322 VRTP 333
            RTP
Sbjct: 312 KRTP 315

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>MB3R1_ARATH (Q9S7G7) Myb-related protein 3R-1 (Plant c-MYB-like protein 1)|
           (Protein PC-MYB1) (PC-MYB1)
          Length = 776

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 15/70 (21%), Positives = 28/70 (40%)
 Frame = +3

Query: 3   WXVAMQPNXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQEHIG 182
           W    Q   GR          +H     +   WT EE    + A ++YG  W ++ + + 
Sbjct: 110 WSTISQHLPGRIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLP 169

Query: 183 TKTAVQIRSH 212
            ++   I++H
Sbjct: 170 GRSDNSIKNH 179

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>MMP1_RABIT (P13943) Interstitial collagenase precursor (EC 3.4.24.7) (Matrix|
           metalloproteinase-1) (MMP-1)
          Length = 468

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +3

Query: 48  ILSSLGSHTRSQSSGXKWTDEEH-EKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKF 224
           +L  +GSH    +S  +  D E  +K+LE        WR+I +  G   AV+     Q+F
Sbjct: 10  LLWGVGSHGFPAASETQEQDVEMVQKYLENYYNLKDDWRKIPKQRGNGLAVEKLKQMQEF 69

Query: 225 FS-KVVREPGAK 257
           F  KV  +P A+
Sbjct: 70  FGLKVTGKPDAE 81

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>YMA9_CAEEL (P34454) Hypothetical protein F54F2.9|
          Length = 299

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
 Frame = +3

Query: 81  QSSGXKWTDEEHEKFLEALKLYGRS----WRQIQEHIGTKTAVQI 203
           + S   W+  E + F  AL+ Y +     W +I E IG+KT  Q+
Sbjct: 236 EKSEDDWSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQV 280

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>CEF1_NEUCR (Q7SAF6) Pre-mRNA-splicing factor cef-1|
          Length = 779

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 233
           +W+ EE EK L   KL    WR I   +G +TA Q     Q+   +
Sbjct: 60  EWSKEEDEKLLHLAKLMPTQWRTIAPIVG-RTANQCLERYQRLLDE 104

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>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2|
           (Pseudo-response regulator 2) (TOC2 protein)
          Length = 535

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYGRSW---RQIQE--HIGTKTAVQIRSHAQKF 224
           WT E H+KF++A++  G       +I E   +GT T   + SH QKF
Sbjct: 301 WTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKF 347

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>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 29.6 bits (65), Expect = 5.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 24  NXGRGWVSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYG 149
           N G G  ++    G   R       WT+E H+KFLEA+++ G
Sbjct: 197 NGGNGIQNMEKKQGKKPRKPRM--TWTEELHQKFLEAIEIIG 236

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>CEF1_CRYNE (Q5K9L1) Pre-mRNA-splicing factor CEF1|
          Length = 838

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQK 221
           +W+  E EK L   KL    WR I   +G +TA Q     QK
Sbjct: 61  EWSKTEDEKLLHLAKLMPTQWRTIAPIVG-RTATQCLERYQK 101

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>ABP1_YEAST (P15891) Actin-binding protein|
          Length = 591

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -3

Query: 481 DDGFDIDDPKASD--CIADNTDTGEPFSWSEPEDDEI*ASLDGPFAGFAPLQESA 323
           DD +D D+ +A+     + N  +G P    EPE +EI  SL    +  AP QE A
Sbjct: 435 DDDWDDDEDEAAQPPLPSRNVASGAPVQKEEPEQEEIAPSLPSRNSIPAPKQEEA 489

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>MTA3_HUMAN (Q9BTC8) Metastasis-associated protein MTA3|
          Length = 594

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +3

Query: 42  VSILSSLGSHTRSQSSGXKWTDEEHEKFLEALKLYGRSWRQIQE 173
           +S+L  LG     +    +W+  E   F EAL+ YG+ +  I++
Sbjct: 252 ISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQ 295

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>MIER1_CHICK (Q5ZKT9) Mesoderm induction early response protein 1 (Mi-er1)|
          Length = 513

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 99  WTDEEHEKFLEALKLYGRSWRQIQ 170
           WT+EE   F + LK+YG+ +  IQ
Sbjct: 290 WTEEECRNFEQGLKVYGKDFHVIQ 313

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>CEF1_USTMA (Q4P652) Pre-mRNA-splicing factor CEF1|
          Length = 820

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3

Query: 96  KWTDEEHEKFLEALKLYGRSWRQIQEHIGTKTAVQIRSHAQKFFSK 233
           +W+ EE EK L   KL    WR I   +G +TA       QK   +
Sbjct: 62  EWSKEEDEKLLHLAKLMPTQWRTIAPLVG-RTANHCLERYQKLLDQ 106

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>Y2093_MYCBO (P0A5G2) Hypothetical protein Mb2093c|
          Length = 407

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 320 LARIWMQRLP---LWPRGRDLDLNFSSGFAHHLGEKLLGM 210
           LA + +  LP   L   GRD DL  S+G  HHL +   GM
Sbjct: 103 LANLELHLLPIEELATLGRDFDLVVSTGVLHHLADPRAGM 142

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>Y2067_MYCTU (P0A5G1) Hypothetical protein Rv2067c/MT2127|
          Length = 407

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 320 LARIWMQRLP---LWPRGRDLDLNFSSGFAHHLGEKLLGM 210
           LA + +  LP   L   GRD DL  S+G  HHL +   GM
Sbjct: 103 LANLELHLLPIEELATLGRDFDLVVSTGVLHHLADPRAGM 142

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>EP15_MOUSE (P42567) Epidermal growth factor receptor substrate 15 (Protein|
           Eps15) (AF-1p protein)
          Length = 897

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = -3

Query: 505 DDSGEVLRDDGFDIDDPKASDCIAD-NTD--TGEPFSWSEPEDDEI*ASLDGPFAG 347
           DD      +D F+++    +D +AD N D    +PF  S+P  D+    +D PF G
Sbjct: 590 DDDKHSKEEDPFNVESSSLTDAVADTNLDFFQSDPFVGSDPFKDDPFGKID-PFGG 644


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,356,478
Number of Sequences: 219361
Number of extensions: 1670006
Number of successful extensions: 5493
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 5267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5488
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result