>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  107 bits (54), Expect = 2e-20
 Identities = 86/97 (88%)
 Strand = Plus / Minus

                                                                         
Query: 8     ttatgtcattttagnggaaaacaggctaagtacataatattaatgagctaaccaaggttc 67
             |||||||||||||| |||||||| |||||||| ||||||||  |||||||||||||||||
Sbjct: 24251 ttatgtcattttagaggaaaacaagctaagtatataatattcgtgagctaaccaaggttc 24192

                                                  
Query: 68    ttaagccaatttgagcttattatgtgtttttggagct 104
             ||| |||| |||||| ||||||||   ||||||||||
Sbjct: 24191 ttatgccattttgaggttattatggcattttggagct 24155



 Score =  105 bits (53), Expect = 7e-20
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggctagttatgtcattttagnggaaaacaggctaagtacataatattaatgagctaacc 60
             |||||| ||||  |||||||| |||||||  |||||||| ||||||||| ||||||||||
Sbjct: 23861 gggctaattatcccattttagaggaaaactagctaagtatataatattactgagctaacc 23802

                                                         
Query: 61    aaggttcttaagccaatttgagcttattatgtgtttttggagct 104
             |||||||||| |||| |||||||||||||||   ||||||||||
Sbjct: 23801 aaggttcttatgccattttgagcttattatggtattttggagct 23758



 Score =  105 bits (53), Expect = 7e-20
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggctagttatgtcattttagnggaaaacaggctaagtacataatattaatgagctaacc 60
             |||||| ||||  |||||||| | |||||| |||||||| |||||||||||||| |||||
Sbjct: 23477 gggctaattatcccattttagagaaaaacaagctaagtatataatattaatgagttaacc 23418

                                                         
Query: 61    aaggttcttaagccaatttgagcttattatgtgtttttggagct 104
             |||||||||| |||| |||||||||||||||   ||||||||||
Sbjct: 23417 aaggttcttatgccattttgagcttattatggtattttggagct 23374



 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                         
Query: 1     gggctagttatgtcattttagnggaaaacaggctaagtacataatattaatgagctaacc 60
             |||||| ||||  |||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 23081 gggctaattatcccattttagaggaaaacaagctaagtatataatattaatgagctaacc 23022

                     
Query: 61    aaggttct 68
             ||||||||
Sbjct: 23021 aaggttct 23014



 Score = 46.1 bits (23), Expect = 0.055
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 120   gtgagctaaccaaggttcttatg 142
             |||||||||||||||||||||||
Sbjct: 24209 gtgagctaaccaaggttcttatg 24187



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 121   tgagctaaccaaggttcttatg 142
             ||||||||||||||||||||||
Sbjct: 23811 tgagctaaccaaggttcttatg 23790



 Score = 42.1 bits (21), Expect = 0.86
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 64    gttcttaagccaatttgagcttattatgtgtttttggagct 104
             ||||||| |||| |||||||||||||||   ||||||||||
Sbjct: 14085 gttcttatgccattttgagcttattatggtattttggagct 14045

>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence
          Length = 170284

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 77     tttgagcttattatgtgtttttg 99
              |||||||||||||||||||||||
Sbjct: 163160 tttgagcttattatgtgtttttg 163138

>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence
          Length = 161619

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 77    tttgagcttattatgtgtttttg 99
             |||||||||||||||||||||||
Sbjct: 51536 tttgagcttattatgtgtttttg 51514

>gb|AC114801.4| Homo sapiens BAC clone RP11-777B9 from 4, complete sequence
          Length = 69745

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    aatttgagcttattatgtgtt 95
             |||||||||||||||||||||
Sbjct: 26579 aatttgagcttattatgtgtt 26559

>gb|AC091904.2| Homo sapiens chromosome 5 clone RP11-18M19, complete sequence
          Length = 63891

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   tctttgttggggaaaataagc 219
             |||||||||||||||||||||
Sbjct: 37512 tctttgttggggaaaataagc 37492

>gb|AC114298.2| Homo sapiens chromosome 5 clone RP11-12C2, complete sequence
          Length = 88787

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 199   tctttgttggggaaaataagc 219
             |||||||||||||||||||||
Sbjct: 53516 tctttgttggggaaaataagc 53536

>ref|XM_448744.1| Candida glabrata CBS138, CAGL0K12166g partial mRNA
          Length = 2295

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 ttagtgagctaaccaaggtt 136
           ||||||||||||||||||||
Sbjct: 788 ttagtgagctaaccaaggtt 807

>gb|AC099571.3| Homo sapiens chromosome 1 clone RP11-438H8, complete sequence
          Length = 167231

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   aaccaaggttcttatgatgt 146
             ||||||||||||||||||||
Sbjct: 59831 aaccaaggttcttatgatgt 59812

>emb|AL449105.22| Human DNA sequence from clone RP11-9H12 on chromosome 9q32-33.3,
             complete sequence
          Length = 107164

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aagtacataatattaatgag 54
             ||||||||||||||||||||
Sbjct: 60658 aagtacataatattaatgag 60639

>emb|AL137018.9| Human DNA sequence from clone RP11-133M9 on chromosome 9q13-21.33
              Contains the 3' end of the RORB gene for RAR-related orphan
              receptor B protein (RZRB, ROR-BETA), complete sequence
          Length = 157168

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     agtacataatattaatgagc 55
              ||||||||||||||||||||
Sbjct: 149483 agtacataatattaatgagc 149502

>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence
          Length = 1302002

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 117     ttagtgagctaaccaaggtt 136
               ||||||||||||||||||||
Sbjct: 1189939 ttagtgagctaaccaaggtt 1189920

>emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 10/11
          Length = 298050

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    gttcttatgatgttttacct 153
              ||||||||||||||||||||
Sbjct: 122001 gttcttatgatgttttacct 121982

>emb|BX537748.1|HSM805831 Homo sapiens genomic DNA; cDNA DKFZp686B0788 (from clone
            DKFZp686B0788)
          Length = 9387

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   agtacataatattaatgagc 55
            ||||||||||||||||||||
Sbjct: 8207 agtacataatattaatgagc 8226

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 185      attagctaagtatgtctttg 204
                ||||||||||||||||||||
Sbjct: 21871870 attagctaagtatgtctttg 21871851

>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1114B07
          Length = 148060

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    attagctaagtatgtctttg 204
              ||||||||||||||||||||
Sbjct: 101163 attagctaagtatgtctttg 101144

>emb|BX294657.11| Zebrafish DNA sequence from clone DKEY-21K18 in linkage group 19,
             complete sequence
          Length = 124224

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   gtatgtctttgttggggaaa 213
             ||||||||||||||||||||
Sbjct: 35017 gtatgtctttgttggggaaa 35036

>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   agctaattatcttattttgg 178
             ||||||||||||||||||||
Sbjct: 62708 agctaattatcttattttgg 62689

>emb|AL606756.17| Mouse DNA sequence from clone RP23-265O19 on chromosome 3, complete
              sequence
          Length = 193976

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ttcttaagccaatttgagct 84
              ||||||||||||||||||||
Sbjct: 129942 ttcttaagccaatttgagct 129961


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,282,048
Number of Sequences: 3902068
Number of extensions: 2282048
Number of successful extensions: 48135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48081
Number of HSP's gapped (non-prelim): 54
length of query: 263
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 241
effective length of database: 17,147,199,772
effective search space: 4132475145052
effective search space used: 4132475145052
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)