| Clone Name | baal1j19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | COMP_RAT (P35444) Cartilage oligomeric matrix protein precursor ... | 30 | 3.3 | 2 | DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-re... | 30 | 3.3 | 3 | COMP_MOUSE (Q9R0G6) Cartilage oligomeric matrix protein precurso... | 30 | 5.6 | 4 | SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor | 29 | 7.3 |
|---|
>COMP_RAT (P35444) Cartilage oligomeric matrix protein precursor (COMP)| Length = 755 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 43 PASQPGXTLSPPSPCYPGSKIPGVV 117 PA PG ++ P + C PGS PGVV Sbjct: 75 PARTPGLSVRPVALCAPGSCFPGVV 99
>DIAP1_HUMAN (O60610) Protein diaphanous homolog 1 (Diaphanous-related formin-1)| (DRF1) Length = 1248 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = +1 Query: 28 VGVRFPASQPGXTLSPPSPCYPGS-KIP 108 VG+ P+S PG T PP P PGS +IP Sbjct: 640 VGIPSPSSLPGGTAIPPPPPLPGSARIP 667
>COMP_MOUSE (Q9R0G6) Cartilage oligomeric matrix protein precursor (COMP)| Length = 755 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 43 PASQPGXTLSPPSPCYPGSKIPGVV 117 PA PG ++ P C PGS PGVV Sbjct: 75 PARTPGLSVRPVPLCAPGSCFPGVV 99
>SDK2_CHICK (Q8AV57) Protein sidekick-2 precursor| Length = 2177 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 43 PASQPGXTLSPPSPCYPGSKIP 108 P SQPG PPS PGS+ P Sbjct: 2148 PPSQPGTLYRPPSSLAPGSRAP 2169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,729,991 Number of Sequences: 219361 Number of extensions: 1022309 Number of successful extensions: 3338 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3336 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)