ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1i21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IP5P1_ARATH (Q84MA2) Type I inositol-1,4,5-trisphosphate 5-phosp... 56 3e-08
2IP5P2_ARATH (Q9FUR2) Type I inositol-1,4,5-trisphosphate 5-phosp... 46 3e-05
3IP5P3_ARATH (Q9LR47) Type I inositol-1,4,5-trisphosphate 5-phosp... 35 0.079
4SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inos... 32 0.87
5SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inos... 31 1.1
6SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inosit... 31 1.1
7OCRL_HUMAN (Q01968) Inositol polyphosphate 5-phosphatase OCRL-1 ... 31 1.1
8GPMI_AGRT5 (Q8UAA5) 2,3-bisphosphoglycerate-independent phosphog... 31 1.5
9ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, m... 30 1.9
10SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein 30 2.5
11ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, m... 28 7.4
12YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 ... 28 7.4
13MUTB_MYCTU (P65487) Probable methylmalonyl-CoA mutase large subu... 28 7.4
14MUTB_MYCBO (P65488) Probable methylmalonyl-CoA mutase large subu... 28 7.4
15SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein 28 9.7
16RPOC2_ANTFO (Q85C71) DNA-directed RNA polymerase beta'' chain (E... 28 9.7
17Y4337_RHIME (O33683) Hypothetical protein RA0937 28 9.7
18PBUA_PSEU4 (Q08017) Ferric-pseudobactin M114 receptor pbuA precu... 28 9.7
19SYFB_VIBF1 (Q5E5G5) Phenylalanyl-tRNA synthetase beta chain (EC ... 28 9.7

>IP5P1_ARATH (Q84MA2) Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 (EC|
           3.1.3.56) (At5PTase1)
          Length = 590

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +2

Query: 47  SYRRAELNLSDHRPVSAVYMAEVEVLCHRKFQKALTFTNVEVE 175
           +YRR E+ LSDHRPV+A ++AEVEVL  RK Q ALT T  E++
Sbjct: 544 NYRRNEIKLSDHRPVTATFLAEVEVLSPRKLQHALTLTYAEIQ 586



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>IP5P2_ARATH (Q9FUR2) Type I inositol-1,4,5-trisphosphate 5-phosphatase 2 (EC|
           3.1.3.56) (At5PTase2)
          Length = 646

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 19/38 (50%), Positives = 28/38 (73%)
 Frame = +2

Query: 50  YRRAELNLSDHRPVSAVYMAEVEVLCHRKFQKALTFTN 163
           Y+R+E+ +SDHRPV++++   VEV  HRK Q+AL   N
Sbjct: 597 YKRSEIRMSDHRPVTSIFNVGVEVFDHRKLQRALHVNN 634



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>IP5P3_ARATH (Q9LR47) Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 (EC|
           3.1.3.56) (Cotyledon vascular pattern 2 protein)
          Length = 609

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 47  SYRRAELNLSDHRPVSAVYMAEVEVLCHRKFQKALTFTNVEVENHLLL 190
           SY R E   SDHRPV  ++ AEVE   H + ++  +++   V+   LL
Sbjct: 551 SYVRGESRFSDHRPVYGIFCAEVE-SAHNRIKRTTSYSASRVQAEELL 597



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>SYNJ2_HUMAN (O15056) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
           inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
 Frame = +2

Query: 50  YRRAELNLSDHRPVSAVYMAEVEVL----CHRKFQKALTF 157
           Y RAEL  SDHRPV A+   EV+ +      R FQ+  +F
Sbjct: 845 YGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSF 884



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>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
           inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1434

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 50  YRRAELNLSDHRPVSAVYMAEVE 118
           Y RAEL  SDHRPV A+   EV+
Sbjct: 845 YGRAELQASDHRPVLAIVEVEVQ 867



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>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
           inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 50  YRRAELNLSDHRPVSAVYMAEVE 118
           Y RAEL  SDHRPV A+   EV+
Sbjct: 862 YGRAELQASDHRPVLAIVEVEVQ 884



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>OCRL_HUMAN (Q01968) Inositol polyphosphate 5-phosphatase OCRL-1 (EC 3.1.3.36)|
           (Lowe's oculocerebrorenal syndrome protein)
          Length = 901

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +2

Query: 62  ELNLSDHRPVSAVYMAEVEVLCHRKFQK 145
           EL  SDH+PVSA++   V+V+  R+++K
Sbjct: 518 ELKTSDHKPVSALFHIGVKVVDERRYRK 545



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>GPMI_AGRT5 (Q8UAA5) 2,3-bisphosphoglycerate-independent phosphoglycerate|
           mutase (EC 5.4.2.1) (Phosphoglyceromutase)
           (BPG-independent PGAM) (iPGM)
          Length = 505

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -3

Query: 392 TGRPIWSETHTHNPIPVCIKLPPLFASVHSGNLPEITSISLRPLRLELRP 243
           TG P     HT NP+PV +   P  A VH G L ++    L+ + + L P
Sbjct: 448 TGGP--HTAHTTNPVPVILFGGPEGAKVHDGILADVAPTLLQLMNVPLPP 495



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>ODO1_CAEEL (O61199) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1029

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 169 GRESSFIGEIKHLFNEEPWAVREHAGLSSRRNGRREMLVISGKLPECTEANRGGSLMHTG 348
           G E   I +I   F++ P     H GL     GR++ML  +     C EA   GSL+  G
Sbjct: 609 GIEQENIEQIIGKFSQYPEGFNLHRGLERTLKGRQQMLKDNSLDWACGEALAFGSLLKEG 668

Query: 349 I 351
           I
Sbjct: 669 I 669



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>SYP2L_HUMAN (Q9H987) Synaptopodin 2-like protein|
          Length = 977

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 14/96 (14%)
 Frame = -3

Query: 302 GNLPEITSISLRPLR----------LELRPACSLTAQGSSLNKCFISPIKDDSRPLHW*M 153
           G  P  TS+  RPL           L   P   L++QG +    F S +   + P+    
Sbjct: 477 GQRPTTTSVIFRPLAPKRANDSLGGLSPAPPPFLSSQGPTPLPSFTSGVPSHA-PVSGSP 535

Query: 152 LEPSE----TFCGIKLQPRPCRPQTPGGDPKD*APP 57
             P      T       P P RP TPGG P+  APP
Sbjct: 536 STPRSSGPVTATSSLYIPAPSRPVTPGGAPEPPAPP 571



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>ODO1_CAEBR (Q623T0) 2-oxoglutarate dehydrogenase E1 component, mitochondrial|
           precursor (EC 1.2.4.2) (Alpha-ketoglutarate
           dehydrogenase)
          Length = 1027

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 21/61 (34%), Positives = 25/61 (40%)
 Frame = +1

Query: 169 GRESSFIGEIKHLFNEEPWAVREHAGLSSRRNGRREMLVISGKLPECTEANRGGSLMHTG 348
           G E   I  I   F   P     H GL     GR++ML  +     C EA   GSL+  G
Sbjct: 607 GIEQENIEHIIGKFGSYPEGFNLHRGLERTLKGRQQMLKDNSLDWACGEALAFGSLLKEG 666

Query: 349 I 351
           I
Sbjct: 667 I 667



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>YNK6_YEAST (P50942) Hypothetical 133.3 kDa protein in CYB5-LEU4 intergenic|
           region
          Length = 1183

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 47  SYRRAELNLSDHRPVSAVYMAEVE 118
           +Y  A L +SDH+PV A Y A V+
Sbjct: 863 AYSDAPLKISDHKPVYAAYRANVK 886



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>MUTB_MYCTU (P65487) Probable methylmalonyl-CoA mutase large subunit (EC|
           5.4.99.2) (MCM)
          Length = 750

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 139 SEGSNIHQCRGRESSFIGEIKHLFNEEPWAVREHAGLSS 255
           +EG  +H   G      G    ++  +PW +R++AG S+
Sbjct: 72  AEGYPLHSFPGEPPFVRGPYPTMYVNQPWTIRQYAGFST 110



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>MUTB_MYCBO (P65488) Probable methylmalonyl-CoA mutase large subunit (EC|
           5.4.99.2) (MCM)
          Length = 750

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 139 SEGSNIHQCRGRESSFIGEIKHLFNEEPWAVREHAGLSS 255
           +EG  +H   G      G    ++  +PW +R++AG S+
Sbjct: 72  AEGYPLHSFPGEPPFVRGPYPTMYVNQPWTIRQYAGFST 110



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>SYP2L_MOUSE (Q8BWB1) Synaptopodin 2-like protein|
          Length = 975

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -3

Query: 113 PRPCRPQTPGGDPKD*APP 57
           P P RP TPGG P+   PP
Sbjct: 552 PAPSRPVTPGGAPEPPTPP 570



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>RPOC2_ANTFO (Q85C71) DNA-directed RNA polymerase beta'' chain (EC 2.7.7.6) (PEP)|
            (Plastid-encoded RNA polymerase beta'' subunit) (RNA
            polymerase beta'' subunit)
          Length = 1445

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 435  FFXGVGLPFILLFIYRTTNLVGNTHSQPNP 346
            FF  +   F+ + + R   L+GN+HS P+P
Sbjct: 1013 FFLSIERNFMEILLLRKLGLLGNSHSLPSP 1042



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>Y4337_RHIME (O33683) Hypothetical protein RA0937|
          Length = 451

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -1

Query: 379 FGRKH-TLTTQSLYASNCHPY 320
           FGR   T++ +SLY S CHPY
Sbjct: 36  FGRNEGTMSRESLYISACHPY 56



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>PBUA_PSEU4 (Q08017) Ferric-pseudobactin M114 receptor pbuA precursor|
          Length = 826

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/46 (30%), Positives = 27/46 (58%)
 Frame = +1

Query: 166 RGRESSFIGEIKHLFNEEPWAVREHAGLSSRRNGRREMLVISGKLP 303
           R + +++  ++KH FN++ W+++  AG+ SR     E    SG +P
Sbjct: 389 RSKRATYFADLKHQFNDD-WSLKV-AGVYSRNTQDMEYAFPSGAVP 432



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>SYFB_VIBF1 (Q5E5G5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 795

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +2

Query: 59  AELNLSDHRPVSAVYMAEVEVLCHRKFQKALTFTNVEVENHLLL 190
           A LN++DH+  +       ++L  R + +A+T++ VE E   L+
Sbjct: 481 AALNMNDHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLI 524


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,832,208
Number of Sequences: 219361
Number of extensions: 1259054
Number of successful extensions: 2848
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2848
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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