ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1i20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MT21_ORYSA (P94029) Metallothionein-like protein type 2 42 0.002
2MT2_CICAR (Q39459) Metallothionein-like protein 2 (MT-2) 32 0.97
3PIGT_MOUSE (Q8BXQ2) GPI transamidase component PIG-T precursor (... 30 3.7
4MT23_BRAJU (P56170) Metallothionein-like protein type 2, MT2-22 30 4.8
5MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1) 30 4.8
6SOX14_DROME (P40656) Putative transcription factor SOX-14 30 6.3
7MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1) 29 8.2

>MT21_ORYSA (P94029) Metallothionein-like protein type 2|
          Length = 82

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 22/40 (55%), Positives = 26/40 (65%)
 Frame = +1

Query: 67  CKMYPGMDEGVSTTATSSQALVMGVASSKGNGPSFEAAAA 186
           CKMYP M E V+TT    Q ++MGVA SKG+    EA AA
Sbjct: 23  CKMYPEMAEEVTTT----QTVIMGVAPSKGHAEGLEAGAA 58



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>MT2_CICAR (Q39459) Metallothionein-like protein 2 (MT-2)|
          Length = 79

 Score = 32.3 bits (72), Expect = 0.97
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = +1

Query: 67  CKMYPGMDEGVSTTATSSQALVMGVASSK 153
           CKMYP M     T  T+S+ LVMGVAS K
Sbjct: 23  CKMYPDMSY---TEQTTSETLVMGVASGK 48



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>PIGT_MOUSE (Q8BXQ2) GPI transamidase component PIG-T precursor|
           (Phosphatidylinositol-glycan biosynthesis, class T
           protein) (Neuronal development-associated protein 7)
          Length = 582

 Score = 30.4 bits (67), Expect = 3.7
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -1

Query: 557 LHTQEYIYVDKTGKAHEDGTKAVGEAHDNTTQNTVQATRGTY 432
           L +Q  +YVD TG + ++ T  V     +T Q+ +  TR TY
Sbjct: 278 LASQSLVYVDITGYSQDNETLEVSPPPTSTYQDVILGTRKTY 319



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>MT23_BRAJU (P56170) Metallothionein-like protein type 2, MT2-22|
          Length = 80

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +1

Query: 67  CKMYPGMDEGVSTTATSSQALVMGVASS 150
           CKMYP  D   S   T+S+ALV+GVA S
Sbjct: 22  CKMYP--DLSFSGETTTSEALVLGVAPS 47



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>MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1)|
          Length = 76

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 70  KMYPGMDEGVSTTATSSQALVMGVASSKGNGPSFEAAAAE 189
           K YP ++E   T+  +   +V+GVA  K   P F  AAAE
Sbjct: 19  KKYPDLEE---TSTAAQPTVVLGVAPEKKAAPEFVEAAAE 55



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>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 17/63 (26%), Positives = 26/63 (41%)
 Frame = -1

Query: 272 PSPCVDSTDHLQVHGLQVQLGPHLHPPFSAAAASNEGPLPLEDATPMTRAWEEVAVVLTP 93
           P+P  DST             PH  PPFS + +    P P    TP  +  +  A +  P
Sbjct: 42  PAPKADST-------------PHTLPPFSPSPSPASSPSPAPAQTPGAQKTQSQAAITHP 88

Query: 92  SSI 84
           +++
Sbjct: 89  AAV 91



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>MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1)|
          Length = 70

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = +1

Query: 70  KMYPGMDEGVSTTATSSQALVMGVASSKGNGPSFEAAAAE 189
           KMYP +DE  ST  T+   +V+GVA     G  FE A+ E
Sbjct: 19  KMYPDLDEQAST--TTQAVVVVGVAHENKAG-QFEMASGE 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,859,478
Number of Sequences: 219361
Number of extensions: 1201428
Number of successful extensions: 3500
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3497
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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