| Clone Name | baal1i17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118973 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 118915 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118914 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118855 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118854 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118795 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118794 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118735 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118734 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118675 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118674 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118615 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118614 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118555 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118554 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118495 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118494 tgttggtacggaggga 118479 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96183 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 96241 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96242 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 96301 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96302 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 96361 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96362 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96421 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96422 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96481 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96482 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96541 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96542 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96601 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96602 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96661 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96662 tgttggtacggaggga 96677 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 118966 cttgacccctgttatttttgggtca 118990 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 96190 cttgacccctgttatttttgggtca 96166
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118973 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 118915 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118914 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118855 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118854 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118795 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118794 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118735 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118734 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118675 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118674 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118615 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118614 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118555 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118554 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118495 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118494 tgttggtacggaggga 118479 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96183 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 96241 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96242 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 96301 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96302 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 96361 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96362 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96421 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96422 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96481 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96482 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96541 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96542 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96601 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96602 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96661 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96662 tgttggtacggaggga 96677 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 118966 cttgacccctgttatttttgggtca 118990 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 96190 cttgacccctgttatttttgggtca 96166
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118922 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 118864 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118863 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118804 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118803 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118744 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118743 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118684 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118683 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118624 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118623 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118564 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118563 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118504 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118503 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118444 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118443 tgttggtacggaggga 118428 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96128 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 96186 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96187 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 96246 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96247 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 96306 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96307 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96366 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96367 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96426 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96427 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96486 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96487 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96546 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96547 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96606 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96607 tgttggtacggaggga 96622 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 118915 cttgacccctgttatttttgggtca 118939 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 96135 cttgacccctgttatttttgggtca 96111
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508761 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 31508819 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508820 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 31508879 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508880 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 31508939 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508940 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 31508999 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509000 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 31509059 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509060 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 31509119 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509120 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 31509179 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509180 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 31509239 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 31509240 tgttggtacggaggga 31509255 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 447 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 716 bits (361), Expect = 0.0 Identities = 367/369 (99%) Strand = Plus / Minus Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 510 acggaggga 518 ||||||||| Sbjct: 27320303 acggaggga 27320295 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 64 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 123 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 124 taaaggaggtggggg 138 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 67 gtcgagagggaaacagcccggatcaccagctaaggccc 104 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 31508768 cttgacccctgttatttttgggtca 31508744
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 83835 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 83777 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83776 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 83717 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83716 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 83657 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83656 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 83597 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83596 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 83537 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83536 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 83477 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83476 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 83417 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83416 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 83357 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 83356 tgttggtacggaggga 83341 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 83828 cttgacccctgttatttttgggtca 83852
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118942 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 118884 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118883 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118824 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118823 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118764 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118763 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118704 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118703 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118644 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118643 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118584 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118583 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118524 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118523 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118464 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118463 tgttggtacggaggga 118448 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96176 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 96234 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96235 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 96294 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96295 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 96354 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96355 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96414 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96415 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96474 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96475 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96534 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96535 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96594 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96595 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96654 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96655 tgttggtacggaggga 96670 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 118935 cttgacccctgttatttttgggtca 118959 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 96183 cttgacccctgttatttttgggtca 96159
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123224 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 123282 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123283 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 123342 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123343 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 123402 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123403 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 123462 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123463 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 123522 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123523 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 123582 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123583 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 123642 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123643 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 123702 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 123703 tgttggtacggaggga 123718 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14950 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 15008 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15009 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 15068 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15069 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 15128 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15129 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 15188 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15189 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 15248 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15249 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 15308 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15309 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 15368 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15369 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 15428 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 15429 tgttggtacggaggga 15444 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 123231 cttgacccctgttatttttgggtca 123207 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 14957 cttgacccctgttatttttgggtca 14933
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141758 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 141816 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141817 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 141876 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141877 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 141936 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141937 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 141996 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141997 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 142056 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142057 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 142116 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142117 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 142176 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142177 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 142236 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 142237 tgttggtacggaggga 142252 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 141765 cttgacccctgttatttttgggtca 141741
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9269110 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 9269168 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269169 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 9269228 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269229 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 9269288 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269289 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 9269348 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269349 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 9269408 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269409 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 9269468 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269469 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 9269528 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269529 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 9269588 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 9269589 tgttggtacggaggga 9269604 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9228610 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 9228668 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228669 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 9228728 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228729 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 9228788 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228789 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 9228848 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228849 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 9228908 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228909 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 9228968 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228969 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 9229028 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229029 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 9229088 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 9229089 tgttggtacggaggga 9229104 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9165198 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 9165256 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165257 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 9165316 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165317 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 9165376 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165377 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 9165436 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165437 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 9165496 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165497 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 9165556 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165557 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 9165616 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165617 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 9165676 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 9165677 tgttggtacggaggga 9165692 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9057024 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 9057082 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057083 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 9057142 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 9057202 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 9057262 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 9057322 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 9057382 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 9057442 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 9057502 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 9057503 tgttggtacggaggga 9057518 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 9269117 cttgacccctgttatttttgggtca 9269093 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 9228617 cttgacccctgttatttttgggtca 9228593 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 9165205 cttgacccctgttatttttgggtca 9165181 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 9057031 cttgacccctgttatttttgggtca 9057007
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19939095 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 19939153 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939154 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 19939213 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939214 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 19939273 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939274 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 19939333 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939334 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 19939393 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939394 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 19939453 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939454 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 19939513 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939514 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 19939573 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 19939574 tgttggtacggaggga 19939589 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276336 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 10276278 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276277 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 10276218 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276217 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 10276158 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10276157 tgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtggga 10276098 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276097 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 10276038 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276037 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 10275978 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275977 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 10275918 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275917 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 10275858 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 10275857 tgttggtacggaggga 10275842 Score = 952 bits (480), Expect = 0.0 Identities = 493/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387962 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 10388020 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388021 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 10388080 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388081 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 10388140 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388141 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 10388200 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10388201 tgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggg 10388260 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388261 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 10388320 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10388321 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcc 10388380 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388381 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 10388440 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 10388441 tgttggtacggaggga 10388456 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagc 242 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 19939102 cttgacccctgttatttttgggtca 19939078 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 10387969 cttgacccctgttatttttgggtca 10387945 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 10276329 cttgacccctgttatttttgggtca 10276353 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9241171 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 9241113 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241112 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 9241053 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241052 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 9240993 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240992 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 9240933 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240932 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 9240873 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240872 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 9240813 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240812 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 9240753 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240752 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 9240693 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 9240692 tgttggtacggaggga 9240677 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 92 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 145 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 146 acagccaggaggtttgcctagaagcagccaccctttaaagag 187 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 253 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 299 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 45 acgatgggggataagcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 103 |||||||||||||||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580443 acgatgggggataagcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 402 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 9241164 cttgacccctgttatttttgggtca 9241188 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 217 tgcgctgaagatgaacggggctaagcgatctgccgaagct 256 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.0 Identities = 35/40 (87%) Strand = Plus / Minus Query: 91 accagctaaggcccctaaatgaccgctcagtgataaagga 130 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31599277 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 31599335 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599336 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 31599395 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599396 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 31599455 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599456 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 31599515 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599516 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 31599575 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599576 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 31599635 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599636 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 31599695 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599696 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 31599755 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 31599756 tgttggtacggaggga 31599771 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 447 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 716 bits (361), Expect = 0.0 Identities = 367/369 (99%) Strand = Plus / Minus Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 510 acggaggga 518 ||||||||| Sbjct: 27411626 acggaggga 27411618 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 64 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 123 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 124 taaaggaggtggggg 138 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 67 gtcgagagggaaacagcccggatcaccagctaaggccc 104 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 31599284 cttgacccctgttatttttgggtca 31599260
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 46948 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 46890 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46889 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 46830 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46829 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 46770 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46769 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 46710 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46709 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 46650 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46649 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 46590 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46589 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 46530 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46529 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 46470 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 46469 tgttggtacggaggga 46454 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 46941 cttgacccctgttatttttgggtca 46965
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52384 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 52326 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52325 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 52266 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52265 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 52206 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52205 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 52146 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52145 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 52086 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52085 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 52026 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52025 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 51966 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51965 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 51906 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 51905 tgttggtacggaggga 51890 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 52377 cttgacccctgttatttttgggtca 52401
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 562 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 620 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 680 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 740 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 800 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 860 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 920 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 980 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 1040 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 1041 tgttggtacggaggga 1056 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 569 cttgacccctgttatttttgggtca 545
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 32 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 90 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 150 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 210 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 211 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 270 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 271 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 330 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 390 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 450 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 510 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 511 tgttggtacggaggga 526 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 39 cttgacccctgttatttttgggtca 15
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 757 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 815 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 875 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 935 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 995 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 1055 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 1115 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 1175 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 1235 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 1236 tgttggtacggaggga 1251 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 764 cttgacccctgttatttttgggtca 740
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 628 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 686 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 746 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 806 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 866 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 867 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 926 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 986 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 1046 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 1106 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 1107 tgttggtacggaggga 1122 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 635 cttgacccctgttatttttgggtca 611
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 757 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 815 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 875 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 935 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 936 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 995 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 1055 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 1115 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1116 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 1175 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 1235 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 1236 tgttggtacggaggga 1251 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 764 cttgacccctgttatttttgggtca 740
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19950371 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 19950429 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950430 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 19950489 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950490 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 19950549 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950550 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 19950609 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950610 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 19950669 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950670 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 19950729 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950730 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 19950789 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950790 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 19950849 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 19950850 tgttggtacggaggga 19950865 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282375 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 10282317 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282316 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 10282257 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282256 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 10282197 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10282196 tgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtggga 10282137 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282136 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 10282077 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282076 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 10282017 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282016 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 10281957 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281956 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 10281897 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 10281896 tgttggtacggaggga 10281881 Score = 952 bits (480), Expect = 0.0 Identities = 493/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10394001 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 10394059 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394060 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 10394119 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394120 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 10394179 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394180 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 10394239 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10394240 tgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggg 10394299 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394300 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 10394359 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 10394360 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcc 10394419 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394420 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 10394479 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 10394480 tgttggtacggaggga 10394495 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagc 242 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 19950378 cttgacccctgttatttttgggtca 19950354 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 10394008 cttgacccctgttatttttgggtca 10393984 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 10282368 cttgacccctgttatttttgggtca 10282392 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118916 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 118858 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118857 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118798 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118797 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118738 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118737 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118678 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118677 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118618 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118617 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118558 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118557 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118498 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118497 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118438 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118437 tgttggtacggaggga 118422 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96123 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 96181 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96182 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 96241 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96242 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 96301 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96302 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96361 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96362 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96421 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96422 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96481 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96482 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96541 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96542 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96601 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96602 tgttggtacggaggga 96617 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 118909 cttgacccctgttatttttgggtca 118933 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 96130 cttgacccctgttatttttgggtca 96106
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119108 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 119050 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119049 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 118990 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118989 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 118930 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118929 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 118870 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118869 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 118810 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118809 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 118750 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 118690 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118689 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 118630 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 118629 tgttggtacggaggga 118614 Score = 967 bits (488), Expect = 0.0 Identities = 495/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95786 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 95844 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95845 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 95904 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95905 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 95964 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95965 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 96024 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96025 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 96084 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96085 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 96144 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96145 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 96204 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96205 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 96264 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 96265 tgttggtacggaggga 96280 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 119101 cttgacccctgttatttttgggtca 119125 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 95793 cttgacccctgttatttttgggtca 95769
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117889 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 117831 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117830 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 117771 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117770 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 117711 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117710 tgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtggga 117651 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117650 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 117591 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117590 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 117531 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117530 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 117471 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117470 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 117411 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 117410 tgttggtacggaggga 117395 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 117882 cttgacccctgttatttttgggtca 117906
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 43932 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 43874 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43873 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 43814 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43813 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 43754 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43753 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 43694 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 43693 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 43634 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43633 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 43574 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43573 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 43514 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43513 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 43454 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 43453 tgttggtacggaggga 43438 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21185 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 21243 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21244 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 21303 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21304 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 21363 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21364 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 21423 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 21424 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 21483 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21484 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 21543 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21544 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 21603 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21604 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 21663 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 21664 tgttggtacggaggga 21679 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 43925 cttgacccctgttatttttgggtca 43949 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 21192 cttgacccctgttatttttgggtca 21168
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 57661 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 57603 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57602 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 57543 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57542 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 57483 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 57482 tgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagctgtggga 57423 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57422 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 57363 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57362 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 57303 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57302 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 57243 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57242 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 57183 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 57182 tgttggtacggaggga 57167 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 57654 cttgacccctgttatttttgggtca 57678
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 562 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 504 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 444 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 384 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 324 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 323 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 264 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 204 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 144 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 84 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 83 tgttggtacggaggga 68 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 555 cttgacccctgttatttttgggtca 579
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122772 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 122714 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122713 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 122654 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122653 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 122594 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122593 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 122534 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122533 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 122474 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122473 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 122414 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122413 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 122354 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122353 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 122294 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 122293 tgttggtacggaggga 122278 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100065 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 100123 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100124 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 100183 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100184 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 100243 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100244 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 100303 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100304 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 100363 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100364 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 100423 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100424 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 100483 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100484 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 100543 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 100544 tgttggtacggaggga 100559 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 122765 cttgacccctgttatttttgggtca 122789 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 100072 cttgacccctgttatttttgggtca 100048
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 380 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 438 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 498 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 558 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 618 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 678 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 ggttgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 738 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 798 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 858 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 859 tgttggtacggaggga 874 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 387 cttgacccctgttatttttgggtca 363
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123489 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 123431 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123430 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 123371 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123370 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 123311 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123310 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 123251 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123250 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 123191 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 123131 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123130 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 123071 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123070 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 123011 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 123010 tgttggtacggaggga 122995 Score = 959 bits (484), Expect = 0.0 Identities = 494/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100742 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 100800 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100801 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 100860 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100861 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 100920 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100921 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 100980 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100981 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 101040 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101041 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 101100 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101101 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 101160 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101161 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 101220 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 101221 tgttggtacggaggga 101236 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 123482 cttgacccctgttatttttgggtca 123506 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 100749 cttgacccctgttatttttgggtca 100725
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 952 bits (480), Expect = 0.0 Identities = 493/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94354 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 94412 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94413 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 94472 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94473 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 94532 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94533 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 94592 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 94593 tgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggg 94652 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94653 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 94712 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 94713 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcc 94772 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94773 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 94832 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 94833 tgttggtacggaggga 94848 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 94361 cttgacccctgttatttttgggtca 94337
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 952 bits (480), Expect = 0.0 Identities = 493/496 (99%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28418 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 28476 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28477 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 28536 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28537 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 28596 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28597 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 28656 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 28657 tgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaaagcggg 28716 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28717 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 28776 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 28777 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacagagggtgagtcagggcc 28836 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28837 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 28896 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 28897 tgttggtacggaggga 28912 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 28425 cttgacccctgttatttttgggtca 28401
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 902 bits (455), Expect = 0.0 Identities = 468/471 (99%), Gaps = 1/471 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 470 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 412 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 352 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 292 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 232 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 231 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 172 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 112 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 52 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 493 |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 51 taagatcaggccgaaaggcgtactcgatggacaacaggtcaatattcctgt 1 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 463 cttgacccctgttatttttgggtca 487
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 896 bits (452), Expect = 0.0 Identities = 487/496 (98%), Gaps = 2/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122713 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 122655 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 122654 cccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgca 122595 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122594 aagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 122535 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122534 tgactg-gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 122476 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122475 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 122416 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122415 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 122356 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122355 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 122296 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122295 taagatcaggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactacccct 122236 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 122235 tgttggtacggaggga 122220 Score = 896 bits (452), Expect = 0.0 Identities = 487/496 (98%), Gaps = 2/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100024 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 100082 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 100083 cccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgca 100142 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100143 aagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 100202 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100203 tgactg-gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 100261 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100262 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 100321 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100322 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 100381 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100382 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 100441 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 100442 taagatcaggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactacccct 100501 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 100502 tgttggtacggaggga 100517 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 122706 cttgacccctgttatttttgggtca 122730 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 100031 cttgacccctgttatttttgggtca 100007
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 896 bits (452), Expect = 0.0 Identities = 487/496 (98%), Gaps = 2/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6377 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 6435 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6436 cccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgca 6495 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6496 aagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 6555 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6556 tgactg-gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 6614 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6615 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 6674 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6675 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 6734 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6735 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 6794 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6795 taagatcaggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactacccct 6854 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 6855 tgttggtacggaggga 6870 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 6384 cttgacccctgttatttttgggtca 6360
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 896 bits (452), Expect = 0.0 Identities = 487/496 (98%), Gaps = 2/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 965 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1023 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1024 cccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgca 1083 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 aagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 1143 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 tgactg-gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 1202 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1203 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 1262 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1263 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 1322 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1323 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 1382 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1383 taagatcaggccgaaaggctaagtcgatggacaacaggtcaatattcctgtactacccct 1442 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 1443 tgttggtacggaggga 1458 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 972 cttgacccctgttatttttgggtca 948
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 886 bits (447), Expect = 0.0 Identities = 447/447 (100%) Strand = Plus / Plus Query: 53 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 113 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 173 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 233 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 293 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 353 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 413 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 473 acaacaggtcaatattcctgtactacc 499 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||||||| || || ||||||| |||||||||| || || ||||||| Sbjct: 620 gggtcaaggtcggccagtaag-acattgggggaaaagcttcatcatctcgaaagaaacag 562 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 561 cccggatccccagctaaggcccttaaatgaccgctcaatgataaaggaggtgggggtgca 502 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 aagccagccatgaagtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 442 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 382 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 381 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcggg 322 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 321 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 262 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 202 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 142 Query: 503 tgttggtacggaggga 518 |||||||||||||||| Sbjct: 141 tgttggtacggaggga 126 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 cttgacccctgttatttttgggtca 28 |||||||| |||||||||||||||| Sbjct: 613 cttgacccgtgttatttttgggtca 637
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 953 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagggaaacag 1011 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1012 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1071 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1072 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1131 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1191 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1192 tgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggc 1251 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1252 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1311 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1312 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 1371 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1372 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 1431 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 1432 tgttggtcccgaggga 1447
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 132044 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagggaaacag 131986 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131985 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 131926 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131925 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 131866 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131865 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 131806 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 131805 tgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggc 131746 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131745 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 131686 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131685 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 131626 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131625 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 131566 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 131565 tgttggtcccgaggga 131550 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 104720 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagggaaacag 104778 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104779 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104838 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104839 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 104898 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 104958 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 104959 tgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggc 105018 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105019 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 105078 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 105138 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105139 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 105198 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 105199 tgttggtcccgaggga 105214
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126913 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 126855 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 126854 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 126795 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 126794 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 126735 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 126734 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 126675 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || Sbjct: 126674 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcagg 126615 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 126614 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 126555 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 126554 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 126495 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126494 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 126435 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 126434 tgttggtcccgaggga 126419 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 108009 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 108067 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 108068 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 108127 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 108128 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 108187 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 108188 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 108247 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| || Sbjct: 108248 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcaagcagg 108307 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 108308 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 108367 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 108368 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 108427 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 108428 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 108487 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 108488 tgttggtcccgaggga 108503
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 133005 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagggaaacag 132947 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132946 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 132887 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 132886 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 132827 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132826 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 132767 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 132766 tgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggc 132707 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 132706 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 132647 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132646 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 132587 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132586 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 132527 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 132526 tgttggtcccgaggga 132511 Score = 841 bits (424), Expect = 0.0 Identities = 479/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 105644 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagggaaacag 105702 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105703 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 105762 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105763 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 105822 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105823 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 105882 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 105883 tgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcgagcggc 105942 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105943 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106002 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106003 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 106062 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106063 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 106122 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 106123 tgttggtcccgaggga 106138
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 839 bits (423), Expect = 0.0 Identities = 430/431 (99%), Gaps = 1/431 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 378 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 436 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 496 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 556 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 616 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 676 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 736 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 796 Query: 443 taagatcaggc 453 ||||||||||| Sbjct: 797 taagatcaggc 807 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 385 cttgacccctgttatttttgggtca 361
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 833 bits (420), Expect = 0.0 Identities = 478/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138755 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 138697 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138696 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 138637 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138636 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 138577 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138576 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 138517 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 138516 tgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcagg 138457 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138456 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 138397 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138396 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 138337 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138336 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 138277 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 138276 tgttggtcccgaggga 138261 Score = 833 bits (420), Expect = 0.0 Identities = 478/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110544 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 110602 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110603 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 110662 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110663 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 110722 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110723 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 110782 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 110783 tgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgagagcagg 110842 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110843 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 110902 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110903 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 110962 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110963 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 111022 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 111023 tgttggtcccgaggga 111038
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 825 bits (416), Expect = 0.0 Identities = 477/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138550 gggtcgaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 138492 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138491 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 138432 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138431 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 138372 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138371 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 138312 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 138311 tgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcggg 138252 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138251 agtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 138192 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138191 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 138132 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138131 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 138072 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 138071 tgttggtcccgaggga 138056 Score = 825 bits (416), Expect = 0.0 Identities = 477/496 (96%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110547 gggtcgaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 110605 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110606 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 110665 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 110666 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 110725 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110726 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 110785 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 110786 tgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtgagcggg 110845 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110846 agtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 110905 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110906 atgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 110965 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110966 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 111025 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 111026 tgttggtcccgaggga 111041
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 819 bits (413), Expect = 0.0 Identities = 423/425 (99%), Gaps = 1/425 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 756 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 814 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 815 cccggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgca 874 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 934 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 994 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 1054 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 1114 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 1174 Query: 443 taaga 447 ||||| Sbjct: 1175 taaga 1179 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 763 cttgacccctgttatttttgggtca 739
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 817 bits (412), Expect = 0.0 Identities = 476/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138626 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 138568 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138567 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 138508 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138507 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 138448 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138447 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 138388 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || Sbjct: 138387 tgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcagg 138328 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138327 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 138268 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138267 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 138208 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138207 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 138148 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 138147 tgttggtcccgaggga 138132 Score = 817 bits (412), Expect = 0.0 Identities = 476/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111319 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 111377 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111378 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 111437 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111438 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 111497 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111498 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 111557 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || Sbjct: 111558 tgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcagg 111617 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111618 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 111677 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111678 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 111737 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 111738 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 111797 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 111798 tgttggtcccgaggga 111813 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 420 tccacggagggtgagtcagggcct 443 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 420 tccacggagggtgagtcagggcct 443 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 817 bits (412), Expect = 0.0 Identities = 476/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133269 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 133211 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133210 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 133151 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 133150 gagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcac 133091 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133090 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 133031 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || Sbjct: 133030 tgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcagg 132971 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 132970 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 132911 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132910 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 132851 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 132850 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 132791 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 132790 tgttggtcccgaggga 132775 Score = 817 bits (412), Expect = 0.0 Identities = 476/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104702 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 104760 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104761 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104820 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104821 gagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaatagctcac 104880 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104881 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 104940 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| |||| || Sbjct: 104941 tgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgcaagcagg 105000 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105001 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 105060 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105061 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 105120 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105121 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 105180 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 105181 tgttggtcccgaggga 105196
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130713 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 130655 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130654 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 130595 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 130594 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 130535 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130534 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 130475 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 130474 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 130415 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 130414 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 130355 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130354 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 130295 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130294 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 130235 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 130234 tgttggtcccgaggga 130219 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103922 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 103980 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103981 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104040 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104041 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 104100 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104101 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 104160 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 104161 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 104220 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 104221 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 104280 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104281 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 104340 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104341 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 104400 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 104401 tgttggtcccgaggga 104416
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134947 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134889 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134888 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134829 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134828 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134769 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134768 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 134709 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 134708 tgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagt 134649 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134648 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134589 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134529 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134528 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134469 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 134468 tgttggtcccgaggga 134453 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106959 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107017 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107018 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107077 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107078 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107137 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107138 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107197 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 107198 tgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagt 107257 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107258 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107317 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107318 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107377 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107378 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 107437 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107438 tgttggtcccgaggga 107453
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141153 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 141095 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141094 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 141035 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141034 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 140975 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 140974 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 140915 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || Sbjct: 140914 tgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcagg 140855 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 140854 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 140795 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 140794 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 140735 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 140734 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 140675 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 140674 tgttggtcccgaggga 140659 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112504 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 112562 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112563 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 112622 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 112623 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 112682 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112683 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 112742 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||||||||||| |||||| ||||| ||| || Sbjct: 112743 tgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcagg 112802 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 112803 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 112862 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112863 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 112922 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112923 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 112982 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 112983 tgttggtcccgaggga 112998
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135226 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135168 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135167 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135108 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135107 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 135048 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135047 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 134988 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 134987 tgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagt 134928 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134927 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134868 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134867 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134808 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134807 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134748 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 134747 tgttggtcccgaggga 134732 Score = 809 bits (408), Expect = 0.0 Identities = 475/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107181 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107239 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107240 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107299 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107300 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107359 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107360 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107419 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||||||||||||||||||||||||||||||||||| | ||| ||| | Sbjct: 107420 tgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcgagcagt 107479 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107480 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107539 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107540 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107599 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107600 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 107659 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107660 tgttggtcccgaggga 107675
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131821 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 131763 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 131762 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 131703 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131702 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 131643 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131642 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 131583 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 131582 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 131523 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131522 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 131463 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131462 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 131403 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131402 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 131343 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 131342 tgttggtcccgaggga 131327 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105057 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 105115 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 105116 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 105175 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105176 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 105235 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105236 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 105295 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 105296 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 105355 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105356 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 105415 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105416 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 105475 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105476 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 105535 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 105536 tgttggtcccgaggga 105551
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 801 bits (404), Expect = 0.0 Identities = 475/496 (95%), Gaps = 2/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134037 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 133979 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133978 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 133919 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 133918 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 133859 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133858 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 133799 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| || Sbjct: 133798 tgtaaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcagg 133740 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 133739 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 133680 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133679 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 133620 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133619 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 133560 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 133559 tgttggtcccgaggga 133544 Score = 801 bits (404), Expect = 0.0 Identities = 475/496 (95%), Gaps = 2/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106245 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106303 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106304 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106363 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106364 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106423 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106424 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 106483 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||||||||||||||||||||||||| ||||||||||||| ||||| ||| || Sbjct: 106484 tgtaaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcgagcagg 106542 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106543 tgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106602 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106603 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 106662 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106663 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 106722 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 106723 tgttggtcccgaggga 106738
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135638 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135580 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135579 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135520 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135519 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 135460 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135459 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 135400 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 135399 tgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggt 135340 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135339 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 135280 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135279 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 135220 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135219 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 135160 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 135159 tgttggtcccgaggga 135144 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106787 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106845 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106846 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106905 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106906 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106965 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106966 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107025 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||||||||||| | ||||| ||||| Sbjct: 107026 tgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcggt 107085 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107086 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107145 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107146 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107205 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107206 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 107265 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107266 tgttggtcccgaggga 107281
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131814 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 131756 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 131755 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 131696 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131695 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 131636 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131635 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 131576 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 131575 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 131516 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131515 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 131456 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131455 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 131396 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 131395 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 131336 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 131335 tgttggtcccgaggga 131320 Score = 801 bits (404), Expect = 0.0 Identities = 474/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105055 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 105113 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 105114 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 105173 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105174 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 105233 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105234 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 105293 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||| Sbjct: 105294 tgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcgagcggt 105353 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105354 agtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 105413 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105414 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 105473 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 105474 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 105533 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 105534 tgttggtcccgaggga 105549
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 793 bits (400), Expect = 0.0 Identities = 400/400 (100%) Strand = Plus / Minus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 447 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 793 bits (400), Expect = 0.0 Identities = 473/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 955 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1013 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1014 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1073 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1074 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1133 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1193 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||| |||||||||||||||||||||||||||| |||||||| | ||| ||| | Sbjct: 1194 tgtaaaaaggcatcggtaggggagcgttccgccttagggggaagcacctgcgcgagcagc 1253 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1254 ggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1313 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 1373 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1374 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 1433 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 1434 tgttggtcccgaggga 1449
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135346 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135288 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135287 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 135228 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135227 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 135168 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135167 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 135108 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 135107 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 135048 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135047 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134988 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134987 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134928 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 134927 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 134868 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 134867 tgttggtcccgaggga 134852 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107284 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107342 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107343 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107402 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107403 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107462 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107463 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107522 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 107523 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 107582 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107583 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107642 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107643 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107702 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 107703 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 107762 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107763 tgttggtcccgaggga 107778
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135984 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135926 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135925 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135866 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135865 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 135806 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135805 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 135746 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 135745 tgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggt 135686 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135685 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 135626 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135625 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 135566 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 135565 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 135506 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 135505 tgttggtcccgaggga 135490 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107573 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107631 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107632 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107691 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107692 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107751 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107752 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107811 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| |||||||||||||||||||||||||| || ||||| ||||| ||||| Sbjct: 107812 tgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcgagcggt 107871 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107872 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107931 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107932 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107991 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 107992 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 108051 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 108052 tgttggtcccgaggga 108067
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 141925 gggtcaaggtcggctagtgag-acgatgggggataagcttgatcgtcgagagggaaacag 141867 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 141866 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 141807 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 141806 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 141747 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141746 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 141687 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 141686 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 141627 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141626 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 141567 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141566 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 141507 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 141506 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 141447 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 141446 tgttggtcccgaggga 141431 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 111403 gggtcaaggtcggctagtgag-acgatgggggataagcttgatcgtcgagagggaaacag 111461 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 111462 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 111521 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111522 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 111581 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111582 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 111641 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 111642 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 111701 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111702 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 111761 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111762 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 111821 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 111822 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 111881 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 111882 tgttggtcccgaggga 111897
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2478 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 2536 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 2537 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 2596 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2597 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 2656 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2657 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 2716 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 2717 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 2776 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2777 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 2836 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2837 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 2896 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2897 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 2956 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 2957 tgttggtcccgaggga 2972
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134592 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134534 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134533 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134474 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134473 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134414 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 134413 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 134354 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134353 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134294 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134293 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134234 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134233 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134174 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134173 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134114 Query: 503 tgtt 506 |||| Sbjct: 134113 tgtt 134110 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106444 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106502 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106503 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106562 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106563 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106622 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 106623 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 106682 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106683 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 106742 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106743 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106802 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106803 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 106862 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106863 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 106922 Query: 503 tgtt 506 |||| Sbjct: 106923 tgtt 106926
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134727 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134669 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134668 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134609 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134608 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134549 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 134548 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 134489 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134488 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134429 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134428 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134369 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134368 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134309 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134308 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134249 Query: 503 tgtt 506 |||| Sbjct: 134248 tgtt 134245 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106616 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106674 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106675 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106734 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106735 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106794 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 106795 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 106854 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106855 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 106914 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106915 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106974 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106975 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107034 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107035 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 107094 Query: 503 tgtt 506 |||| Sbjct: 107095 tgtt 107098
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134725 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134667 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134666 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134607 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134606 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134547 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 134546 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 134487 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134486 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134427 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134426 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134367 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134366 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134307 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134306 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134247 Query: 503 tgtt 506 |||| Sbjct: 134246 tgtt 134243 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106613 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106671 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106672 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106731 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106732 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106791 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 106792 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 106851 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106852 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 106911 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106912 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106971 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106972 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107031 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107032 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 107091 Query: 503 tgtt 506 |||| Sbjct: 107092 tgtt 107095
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134637 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134579 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134578 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134519 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134518 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134459 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 134458 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 134399 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134398 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134339 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134338 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134279 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134278 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134219 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134218 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134159 Query: 503 tgtt 506 |||| Sbjct: 134158 tgtt 134155 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106491 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106549 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106550 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106609 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106610 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106669 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 106670 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 106729 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106730 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 106789 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106790 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106849 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106850 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 106909 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106910 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 106969 Query: 503 tgtt 506 |||| Sbjct: 106970 tgtt 106973
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135344 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135286 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135285 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 135226 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135225 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 135166 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 135106 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 135105 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 135046 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135045 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134986 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134926 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 134925 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 134866 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 134865 tgttggtcccgaggga 134850 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107282 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107340 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107341 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107400 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107401 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107460 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107461 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107520 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 107521 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 107580 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107581 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107640 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107641 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107700 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 107701 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 107760 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107761 tgttggtcccgaggga 107776
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135075 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 135017 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135016 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 134957 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134956 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134897 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134896 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 134837 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134836 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134777 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134776 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134717 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134716 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134657 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 134656 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 134597 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 134596 tgttggtcccgaggga 134581 Score = 785 bits (396), Expect = 0.0 Identities = 472/496 (95%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107063 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 107121 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107122 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107181 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107182 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 107241 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107242 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 107301 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 107302 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 107361 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107362 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 107421 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107422 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 107481 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 107482 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 107541 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 107542 tgttggtcccgaggga 107557
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134604 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 134546 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134545 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134486 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134485 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 134426 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 134425 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 134366 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 134365 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 134306 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 134305 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 134246 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134245 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 134186 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134185 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 134126 Query: 503 tgtt 506 |||| Sbjct: 134125 tgtt 134122 Score = 785 bits (396), Expect = 0.0 Identities = 463/484 (95%), Gaps = 1/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 106516 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106517 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106576 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106577 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 106636 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 106637 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 106696 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 106697 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 106756 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106757 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 106816 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 106876 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106877 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 106936 Query: 503 tgtt 506 |||| Sbjct: 106937 tgtt 106940
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 777 bits (392), Expect = 0.0 Identities = 471/496 (94%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2723 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 2781 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2782 tccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 2841 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 2842 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcscac 2901 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2902 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 2961 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 2962 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 3021 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 3022 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 3081 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3082 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 3141 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 3142 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccct 3201 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 3202 tgttggtcccgaggga 3217
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 777 bits (392), Expect = 0.0 Identities = 471/496 (94%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 129576 gggtcaaggtcggccagtgag-acgatgagggataagcttcatcgtcgagagggaaacag 129518 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 129517 cccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 129458 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 129457 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 129398 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 129397 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 129338 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | Sbjct: 129337 tgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagt 129278 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 129277 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatcca 129218 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 129217 atgcctcgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 129158 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 129157 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 129098 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 129097 tgttggtcccgaggga 129082 Score = 777 bits (392), Expect = 0.0 Identities = 471/496 (94%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 102880 gggtcaaggtcggccagtgag-acgatgagggataagcttcatcgtcgagagggaaacag 102938 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102939 cccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 102998 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102999 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 103058 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103059 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 103118 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||| ||||||||||||||||||||||||||||||||| | ||||| ||| | Sbjct: 103119 tgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcgagcagt 103178 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 103179 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatcca 103238 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103239 atgcctcgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 103298 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103299 taagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccct 103358 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 103359 tgttggtcccgaggga 103374
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 775 bits (391), Expect = 0.0 Identities = 394/395 (99%) Strand = Plus / Plus Query: 124 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 184 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 244 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 304 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 364 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 424 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 484 atattcctgtactaccccttgttggtacggaggga 518 ||||||||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacggaggga 395
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 769 bits (388), Expect = 0.0 Identities = 471/496 (94%), Gaps = 2/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1051 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1109 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1110 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 1169 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1170 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1229 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1289 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 1290 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 1349 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1350 ggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1409 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 1469 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| Sbjct: 1470 taagatcaggccgaaaggc-tagtcgatggacaacaggtgaatattcctgtactgcccct 1528 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 1529 tgttggtcccgaggga 1544
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 761 bits (384), Expect = 0.0 Identities = 469/496 (94%), Gaps = 1/496 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130913 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 130855 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130854 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 130795 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 130794 gagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 130735 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130734 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 130675 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||| | ||||||||||||||||||||||||||||||||| | ||||| ||| | Sbjct: 130674 tgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagt 130615 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 | | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 130614 gctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatcca 130555 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130554 atgcctcgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 130495 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 130494 taagatcaggccgaagggcgtagtcgatggacaacaggtgaatattcctgtactaccctt 130435 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 130434 tgttggtcccgaggga 130419 Score = 761 bits (384), Expect = 0.0 Identities = 469/496 (94%), Gaps = 1/496 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104481 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 104539 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104540 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104599 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 104600 gagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 104659 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104660 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 104719 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||| | ||||||||||||||||||||||||||||||||| | ||||| ||| | Sbjct: 104720 tgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcgagcagt 104779 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 | | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 104780 gctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatcca 104839 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104840 atgcctcgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 104899 Query: 443 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 502 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 104900 taagatcaggccgaagggcgtagtcgatggacaacaggtgaatattcctgtactaccctt 104959 Query: 503 tgttggtacggaggga 518 ||||||| | |||||| Sbjct: 104960 tgttggtcccgaggga 104975
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 759 bits (383), Expect = 0.0 Identities = 475/504 (94%), Gaps = 10/504 (1%) Strand = Plus / Minus Query: 24 ggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagc 83 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139412 ggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagc 139354 Query: 84 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139353 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 139294 Query: 144 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 203 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 139293 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 139234 Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139233 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggat 139174 Query: 264 -------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 316 || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139173 gtaaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcg 139114 Query: 317 agc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 374 ||| | | || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139113 agcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 139054 Query: 375 agaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgag 434 |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 139053 agaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgag 138994 Query: 435 tcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgta 494 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 138993 tcagggcctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgta 138934 Query: 495 ctaccccttgttggtacggaggga 518 ||||||||||||||| | |||||| Sbjct: 138933 ctaccccttgttggtcccgaggga 138910 Score = 759 bits (383), Expect = 0.0 Identities = 475/504 (94%), Gaps = 10/504 (1%) Strand = Plus / Plus Query: 24 ggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagc 83 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 110648 ggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagc 110706 Query: 84 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110707 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 110766 Query: 144 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 203 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110767 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 110826 Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110827 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggat 110886 Query: 264 -------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 316 || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110887 gtaaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgcg 110946 Query: 317 agc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 374 ||| | | || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110947 agcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 111006 Query: 375 agaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgag 434 |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 111007 agaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgag 111066 Query: 435 tcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgta 494 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 111067 tcagggcctaagatcaggccgaaaggcgtagtcgatgggcaacaggtgaatattcctgta 111126 Query: 495 ctaccccttgttggtacggaggga 518 ||||||||||||||| | |||||| Sbjct: 111127 ctaccccttgttggtcccgaggga 111150
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 737 bits (372), Expect = 0.0 Identities = 460/488 (94%), Gaps = 1/488 (0%) Strand = Plus / Plus Query: 31 gtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 90 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5182 gtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagcccagatc 5240 Query: 91 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 150 |||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 5241 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 5300 Query: 151 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 210 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 5301 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 5360 Query: 211 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 270 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 5361 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaa 5420 Query: 271 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 330 || ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | |||| Sbjct: 5421 tgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacg 5480 Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5481 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5540 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5600 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 510 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 5601 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtc 5660 Query: 511 cggaggga 518 | |||||| Sbjct: 5661 ccgaggga 5668
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 737 bits (372), Expect = 0.0 Identities = 460/488 (94%), Gaps = 1/488 (0%) Strand = Plus / Minus Query: 31 gtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 90 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22743 gtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagcccagatc 22685 Query: 91 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 150 |||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| Sbjct: 22684 accagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagc 22625 Query: 151 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 210 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 22624 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 22565 Query: 211 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 270 ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 22564 cgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaa 22505 Query: 271 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 330 || ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | |||| Sbjct: 22504 tgaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacg 22445 Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 22444 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 22385 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22384 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 22325 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 510 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 22324 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggtc 22265 Query: 511 cggaggga 518 | |||||| Sbjct: 22264 ccgaggga 22257
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 735 bits (371), Expect = 0.0 Identities = 456/483 (94%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 971 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1029 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 1030 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 1089 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1090 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1149 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1150 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 1209 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 1210 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 1269 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1270 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1329 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1330 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 1389 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 1390 aaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgag 1449 Query: 516 gga 518 ||| Sbjct: 1450 gga 1452
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 731 bits (369), Expect = 0.0 Identities = 467/497 (93%), Gaps = 2/497 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatc-gtcgagagggaaaca 81 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgag-acgatgggggataagcttcatctgtcgagagggaaaca 5503 Query: 82 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 141 |||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 5504 gcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgc 5563 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5564 agagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctca 5623 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 5624 ctgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggg 5683 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| | Sbjct: 5684 atgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcag 5743 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5744 ggttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 5803 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| | Sbjct: 5804 aatgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggac 5863 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 5864 ctaagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccc 5923 Query: 502 ttgttggtacggaggga 518 |||||||| | |||||| Sbjct: 5924 ttgttggtcccgaggga 5940
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 731 bits (369), Expect = 0.0 Identities = 467/497 (93%), Gaps = 2/497 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatc-gtcgagagggaaaca 81 ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgag-acgatgggggataagcttcatctgtcgagagggaaaca 5503 Query: 82 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 141 |||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||| Sbjct: 5504 gcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgc 5563 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5564 agagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctca 5623 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 5624 ctgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggg 5683 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| | Sbjct: 5684 atgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcag 5743 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5744 ggttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 5803 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| | Sbjct: 5804 aatgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggac 5863 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 5864 ctaagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccc 5923 Query: 502 ttgttggtacggaggga 518 |||||||| | |||||| Sbjct: 5924 ttgttggtcccgaggga 5940
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 729 bits (368), Expect = 0.0 Identities = 457/484 (94%), Gaps = 2/484 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatggggg-ataagcttcatcgtcgagagggaaaca 81 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 1449 gggtcaaggtcggccagtgag-acgatggggggataagcttcatcgtcgagagggaaaca 1507 Query: 82 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 141 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1508 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgc 1567 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1568 agagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctca 1627 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1628 ctgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggg 1687 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||| ||||||||||||||||||||| |||| |||||||| | ||| ||| Sbjct: 1688 atgtaaaaaaacatcggtaggggagcgttccgtgttagggggaagcatcggcgcgagcca 1747 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 | |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1748 tgccagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 1807 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1808 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 1867 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1868 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacccc 1927 Query: 502 ttgt 505 |||| Sbjct: 1928 ttgt 1931
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 728 bits (367), Expect = 0.0 Identities = 455/483 (94%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 117178 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 117120 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct: 117119 ctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccagga 117060 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 117059 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 117000 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 116999 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 116940 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 116939 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 116880 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 116879 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 116820 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116819 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 116760 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 116759 aaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgag 116700 Query: 516 gga 518 ||| Sbjct: 116699 gga 116697 Score = 728 bits (367), Expect = 0.0 Identities = 455/483 (94%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 90924 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 90982 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct: 90983 ctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccagga 91042 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 91043 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 91102 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| Sbjct: 91103 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacat 91162 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||||||||||||||||| | ||| ||| || || ||||||||| Sbjct: 91163 cggtaggggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcg 91222 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91223 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 91282 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91283 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 91342 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 91343 aaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgag 91402 Query: 516 gga 518 ||| Sbjct: 91403 gga 91405
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 720 bits (363), Expect = 0.0 Identities = 454/483 (93%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 87229 ccagtgag-acgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 87287 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||| Sbjct: 87288 ctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccagga 87347 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 87348 ggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctc 87407 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 87408 ttgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacat 87467 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||||| |||| |||||| | ||| ||| || || ||||||||| Sbjct: 87468 cggtaggggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcg 87527 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87528 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 87587 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87588 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 87647 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 87648 aaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgag 87707 Query: 516 gga 518 ||| Sbjct: 87708 gga 87710
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 718 bits (362), Expect = 0.0 Identities = 369/370 (99%), Gaps = 1/370 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33526593 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 33526651 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526652 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 33526711 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526712 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 33526771 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526772 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 33526831 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526832 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 33526891 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526892 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 33526951 Query: 383 atgccccgaa 392 |||||||||| Sbjct: 33526952 atgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 57 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 116 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 117 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 176 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 177 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 237 ctaagcgatctgccgaagctgtgggatgtcaaaat 271 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 397 caaggtttcctccgcaaggttcgtcca 423 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 245 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 273 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 332 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 333 gcggaagcgagaatgtcggcttgagtaac 361 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 353 ttgagtaacgaaaacattggtgagaatc 380 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 33526600 cttgacccctgttatttttgggtca 33526576 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gatcaggccgaaaggcgtag 465 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 718 bits (362), Expect = 0.0 Identities = 369/370 (99%), Gaps = 1/370 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71790 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 71848 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71849 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 71908 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71909 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 71968 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71969 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 72028 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72029 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 72088 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72089 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 72148 Query: 383 atgccccgaa 392 |||||||||| Sbjct: 72149 atgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 353 ttgagtaacgaaaacattggtgagaatc 380 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 71797 cttgacccctgttatttttgggtca 71773
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 716 bits (361), Expect = 0.0 Identities = 367/369 (99%) Strand = Plus / Minus Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 510 acggaggga 518 ||||||||| Sbjct: 20510 acggaggga 20502
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 712 bits (359), Expect = 0.0 Identities = 453/483 (93%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 89316 ccagtgag-acgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 89374 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||| Sbjct: 89375 ctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccagga 89434 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 89435 ggtttgcctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctc 89494 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 ||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 89495 gtgcgccgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacat 89554 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||||| ||||||||||| | ||| ||| || || ||||||||| Sbjct: 89555 cggtaggggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcg 89614 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 89615 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 89674 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89675 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 89734 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| Sbjct: 89735 aaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgttggtcccgag 89794 Query: 516 gga 518 ||| Sbjct: 89795 gga 89797
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 708 bits (357), Expect = 0.0 Identities = 465/497 (93%), Gaps = 3/497 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 971 gggtcaaggtcggcaagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1029 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1030 ccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 1089 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1090 gagacagccaggaggtttgc-tataagcagccacccttgaaagagtgcgtaatagctcac 1148 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 1149 tgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagctgtggga 1208 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||| |||||||||||||||||||||| ||||| |||||||| | ||| ||| | Sbjct: 1209 tgtaaaaaggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcgagcagt 1268 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1269 ggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcca 1328 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacgg-agggtgagtcagggc 441 |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 1329 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggtagggtgagtcagggc 1388 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 1389 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactgcccc 1448 Query: 502 ttgttggtacggaggga 518 |||||||| | |||||| Sbjct: 1449 ttgttggtcccgaggga 1465
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 706 bits (356), Expect = 0.0 Identities = 454/484 (93%), Gaps = 2/484 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 971 ccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1029 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 1030 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 1089 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1090 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1149 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 1150 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 1209 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 |||||||||||||||||||||||| |||||||| | ||| ||| || || ||||||||| Sbjct: 1210 cggtaggggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcg 1269 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1270 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1329 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1330 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 1389 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtacta-ccccttgttggtacgga 514 |||||||||||||||||||||||||| ||||||||||||| | |||||||||||| | || Sbjct: 1390 aaaggcgtagtcgatggacaacaggtgaatattcctgtaccacccccttgttggtcccga 1449 Query: 515 ggga 518 |||| Sbjct: 1450 ggga 1453
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 692 bits (349), Expect = 0.0 Identities = 450/481 (93%), Gaps = 2/481 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51731 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 51673 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgc 141 |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 51672 cccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgc 51613 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 51612 agagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctta 51553 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 51552 ctgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggg 51493 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 51492 atgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcag 51433 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 51432 cggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 51373 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 51372 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 51313 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 51312 ctaagatcaggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccc 51253 Query: 502 t 502 | Sbjct: 51252 t 51252 Score = 692 bits (349), Expect = 0.0 Identities = 450/481 (93%), Gaps = 2/481 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 38097 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 38155 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgc 141 |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 38156 cccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgc 38215 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 38216 agagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctta 38275 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 38276 ctgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggg 38335 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 38336 atgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcag 38395 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 38396 cggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 38455 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 38456 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 38515 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 38516 ctaagatcaggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccc 38575 Query: 502 t 502 | Sbjct: 38576 t 38576
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 692 bits (349), Expect = 0.0 Identities = 455/489 (93%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 4858 ggtcagccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagat 4916 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 4917 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 4976 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 4977 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 5036 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct: 5037 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaa 5096 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 || |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 5097 atacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggac 5156 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5157 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 5216 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5217 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 5276 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||| Sbjct: 5277 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggt 5336 Query: 510 acggaggga 518 | |||||| Sbjct: 5337 cccgaggga 5345
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 692 bits (349), Expect = 0.0 Identities = 455/489 (93%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 968 ggtcagccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagat 1026 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1027 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 1086 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1087 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1146 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct: 1147 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaa 1206 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 || |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 1207 atacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggac 1266 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1267 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1326 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 1386 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||| Sbjct: 1387 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggt 1446 Query: 510 acggaggga 518 | |||||| Sbjct: 1447 cccgaggga 1455
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 692 bits (349), Expect = 0.0 Identities = 455/489 (93%), Gaps = 1/489 (0%) Strand = Plus / Minus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 150277 ggtcagccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagat 150219 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 150218 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 150159 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 150158 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 150099 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct: 150098 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaa 150039 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 || |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 150038 atacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggac 149979 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 149978 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 149919 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149918 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 149859 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||| Sbjct: 149858 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggt 149799 Query: 510 acggaggga 518 | |||||| Sbjct: 149798 cccgaggga 149790 Score = 692 bits (349), Expect = 0.0 Identities = 455/489 (93%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 118389 ggtcagccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagat 118447 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 118448 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 118507 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 118508 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 118567 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct: 118568 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaa 118627 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 || |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 118628 atacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggac 118687 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118688 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 118747 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118748 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 118807 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||| Sbjct: 118808 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggt 118867 Query: 510 acggaggga 518 | |||||| Sbjct: 118868 cccgaggga 118876
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 692 bits (349), Expect = 0.0 Identities = 450/481 (93%), Gaps = 2/481 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5025 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 5083 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg-ggggtgc 141 |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 5084 cccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtgc 5143 Query: 142 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 5144 agagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctta 5203 Query: 202 ctgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 5204 ctgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaagctgtggg 5263 Query: 262 atgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgg 321 |||| |||| ||||||||||||||||||||||||||||||||||| | || ||| | Sbjct: 5264 atgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgcacgagcag 5323 Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5324 cggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 5383 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5384 aatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggc 5443 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 5444 ctaagatcaggccgaaaggcgtagtcaatggacaacaggtgaatattcctgtactacccc 5503 Query: 502 t 502 | Sbjct: 5504 t 5504
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 692 bits (349), Expect = 0.0 Identities = 455/489 (93%), Gaps = 1/489 (0%) Strand = Plus / Plus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 968 ggtcagccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagat 1026 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1027 caccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 1086 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 1087 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaa 1146 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| || Sbjct: 1147 gcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaa 1206 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 || |||||||||||||||||||||||||||||||||||| | ||| ||| || || ||| Sbjct: 1207 atacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggac 1266 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1267 gaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1326 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 gaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 1386 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||||||||||||||||||||| ||||||||||||||| || | |||||| Sbjct: 1387 aggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactatccttagttggt 1446 Query: 510 acggaggga 518 | |||||| Sbjct: 1447 cccgaggga 1455
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 690 bits (348), Expect = 0.0 Identities = 430/455 (94%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 55 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 115 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 174 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 175 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 234 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 235 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 294 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 295 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 354 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 355 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 414 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 415 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 474 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 475 aacaggtcaatattcctgtactaccccttgttggt 509 ||||||| |||||||||||||||||| |||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt 708
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 682 bits (344), Expect = 0.0 Identities = 351/352 (99%), Gaps = 1/352 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 759 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 817 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 877 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 937 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 938 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 997 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 998 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 1057 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 374 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1058 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 766 cttgacccctgttatttttgggtca 742
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 678 bits (342), Expect = 0.0 Identities = 439/470 (93%), Gaps = 1/470 (0%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| Sbjct: 115228 tgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaa 115169 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 115168 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 115109 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 115108 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 115049 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 115048 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 114989 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||||||||||| | ||||| | | || ||| || || |||||||||||||||||||||| Sbjct: 114988 ttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaagcgagaatgt 114930 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 114929 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 114870 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114869 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 114810 Query: 469 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 518 |||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 114809 atggacaacaggcaaatattcctgtactaccccttgttggtcccgaggga 114760 Score = 678 bits (342), Expect = 0.0 Identities = 439/470 (93%), Gaps = 1/470 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||| Sbjct: 86892 tgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaa 86951 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 86952 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 87011 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 87012 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 87071 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87072 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 87131 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||||||||||| | ||||| | | || ||| || || |||||||||||||||||||||| Sbjct: 87132 ttccgccttagggagaagc-atcacgtgagcaggtgtggacgaagcggaagcgagaatgt 87190 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 87191 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 87250 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87251 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 87310 Query: 469 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 518 |||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 87311 atggacaacaggcaaatattcctgtactaccccttgttggtcccgaggga 87360
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 672 bits (339), Expect = 0.0 Identities = 454/491 (92%), Gaps = 1/491 (0%) Strand = Plus / Minus Query: 28 aaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccgg 87 |||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||| | Sbjct: 145591 aaggtcagccagtgag-acggtgggggataagcttcatcgtcgagaggggaacagcccag 145533 Query: 88 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 147 ||||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||| Sbjct: 145532 atcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagac 145473 Query: 148 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 207 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 145472 agccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 145413 Query: 208 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 267 ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 145412 aagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtca 145353 Query: 268 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcg 327 ||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || | Sbjct: 145352 aaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtgg 145293 Query: 328 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 387 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145292 acaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 145233 Query: 388 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 447 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145232 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagg 145173 Query: 448 tcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttg 507 | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 145172 taaggccgaaaggcgtagttgatggacaacaggtgaatattcctgtactaccccttgttg 145113 Query: 508 gtacggaggga 518 || | |||||| Sbjct: 145112 gtcccgaggga 145102 Score = 672 bits (339), Expect = 0.0 Identities = 454/491 (92%), Gaps = 1/491 (0%) Strand = Plus / Plus Query: 28 aaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccgg 87 |||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||| | Sbjct: 112871 aaggtcagccagtgag-acggtgggggataagcttcatcgtcgagaggggaacagcccag 112929 Query: 88 atcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagac 147 ||||||||||||||||||||||||||||||||||| | |||||||| || ||||| |||| Sbjct: 112930 atcaccagctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagac 112989 Query: 148 agccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatc 207 |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112990 agccaggaagtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatc 113049 Query: 208 gagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 267 ||||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 113050 aagcgctcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtca 113109 Query: 268 aaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcg 327 ||| |||||||||||||||||||||||||||||||||||| | ||| ||| || || | Sbjct: 113110 aaaaacatcggtaggggagcgttccgccttagagggaagcaccagcgcgagcaggtgtgg 113169 Query: 328 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 387 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113170 acaaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcc 113229 Query: 388 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 447 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113230 ccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagg 113289 Query: 448 tcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttg 507 | ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 113290 taaggccgaaaggcgtagttgatggacaacaggtgaatattcctgtactaccccttgttg 113349 Query: 508 gtacggaggga 518 || | |||||| Sbjct: 113350 gtcccgaggga 113360
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 670 bits (338), Expect = 0.0 Identities = 437/470 (92%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 967 tgggggataagcttcattgtcgagagggaaacagcccagatcaccagctaaggcccctaa 1026 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1027 atgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 1086 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1087 gcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1146 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1147 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1206 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||||||||||||| ||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1207 ttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcggaagcgagaatgt 1266 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1267 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1326 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1327 tgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaaaaggcgtagtcg 1386 Query: 469 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 518 |||||||||||| ||||||||||||||||||||||||||| | |||||| Sbjct: 1387 atggacaacaggcgaatattcctgtactaccccttgttggtcccgaggga 1436
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 664 bits (335), Expect = 0.0 Identities = 338/339 (99%) Strand = Plus / Plus Query: 180 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 240 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 300 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 360 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 420 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 479 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 480 gtcaatattcctgtactaccccttgttggtacggaggga 518 ||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacggaggga 339
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 662 bits (334), Expect = 0.0 Identities = 436/470 (92%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 987 tgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaa 1046 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1047 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 1106 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1107 gcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1166 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1167 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1226 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||||||||||| | |||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1227 ttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgt 1286 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1287 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1346 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 1406 Query: 469 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 518 |||||||||||| |||||||||||||||||||||| |||| | |||||| Sbjct: 1407 atggacaacaggcgaatattcctgtactaccccttgctggtcccgaggga 1456
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 650 bits (328), Expect = 0.0 Identities = 464/502 (92%), Gaps = 13/502 (2%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 415 gggtcaaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 473 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 474 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgcg 533 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 534 a-gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 592 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 593 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 652 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 653 tgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcgagcggt 712 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| ||||||||||||||||||||||| | ||||| | ||||||||||||||||||| Sbjct: 713 ggtggacgaagcggaagcgagaatgtc-acgtgagt---gcaaacattggtgagaatcca 768 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 769 atgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcc 828 Query: 443 taa----ga--tcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| || ||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 829 taaacgtgacgtca-gccgaaaggcgtagtcgatggacaacaggtgaatattcctgtact 887 Query: 497 accccttgttggtacggaggga 518 |||||||||||| | |||||| Sbjct: 888 gccccttgttggtcccgaggga 909
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 648 bits (327), Expect = 0.0 Identities = 460/502 (91%), Gaps = 8/502 (1%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 954 gggtaaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1012 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| |||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| Sbjct: 1013 cccagatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgca 1072 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 1073 gagacagccaggaggtttgcctagaagcagccacccttgaaatagtgcgtaatagcttac 1132 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1133 tgatcgagcgctcttgcgccgaagattaacggggctaagcgatccgccgaagctgtggga 1192 Query: 263 tg------tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 316 || | ||||| ||||||||||||||||||||||||||||||||||| | || Sbjct: 1193 tgtaaaaataaaaatacatcggtaggggagcgttccgccttagagggaagcctctgcacg 1252 Query: 317 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 376 ||| | ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1253 agcagcggtggacgaaacggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 1312 Query: 377 aatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtc 436 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 1313 aatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtc 1372 Query: 437 agggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||||||||||||| | ||||||||||| |||||||| |||||| ||||||| Sbjct: 1373 agggcctaagatcaggccgaaacg-gtagtcgatgggcaacaggtgaatatttctgtact 1431 Query: 497 accccttgttggtacggaggga 518 ||||||||||||| | |||||| Sbjct: 1432 accccttgttggtcccgaggga 1453
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 648 bits (327), Expect = 0.0 Identities = 400/423 (94%), Gaps = 1/423 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 951 gggttaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1009 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1010 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1069 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1070 aagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1129 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1189 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||| | Sbjct: 1190 tgtaaaaatgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgccagcaag 1249 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| |||||||||||||||| |||||| |||||||||||| ||||||||||||||||| | Sbjct: 1250 ggtggacgaagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgagaatcta 1309 Query: 383 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 442 ||||||| |||| | |||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1310 atgcccccaaaaactaagggttcctccgcaaggttcgtccacggagggtgagtcaaggcc 1369 Query: 443 taa 445 ||| Sbjct: 1370 taa 1372
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 646 bits (326), Expect = 0.0 Identities = 329/330 (99%) Strand = Plus / Plus Query: 189 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 249 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 309 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 369 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 429 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 488 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 489 cctgtactaccccttgttggtacggaggga 518 |||||||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacggaggga 330
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 640 bits (323), Expect = e-180 Identities = 444/483 (91%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||||| ||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 144899 ccagtgag-acgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccag 144957 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 144958 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 145017 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 145018 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 145077 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 145078 ttgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 145137 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 |||||||||||||||||||| ||| ||||||| | | | ||| || || ||||||||| Sbjct: 145138 cggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcg 145197 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145198 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 145257 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 145258 ctaagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccg 145317 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 | ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||| Sbjct: 145318 agaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgag 145377 Query: 516 gga 518 ||| Sbjct: 145378 gga 145380 Score = 640 bits (323), Expect = e-180 Identities = 444/483 (91%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||||| ||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 87952 ccagtgag-acgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccag 87894 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| Sbjct: 87893 ctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccagga 87834 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 87833 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 87774 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 |||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 87773 ttgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 87714 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 |||||||||||||||||||| ||| ||||||| | | | ||| || || ||||||||| Sbjct: 87713 cggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcg 87654 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87653 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 87594 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 87593 ctaagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccg 87534 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 | ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| | ||| Sbjct: 87533 agaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggtcccgag 87474 Query: 516 gga 518 ||| Sbjct: 87473 gga 87471
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 636 bits (321), Expect = e-179 Identities = 383/401 (95%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 118 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 177 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 178 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 237 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 238 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 297 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 298 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 357 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 358 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 417 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 418 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 478 aggtcaatattcctgtactaccccttgttggtacggaggga 518 ||| ||||||||||||||||||||||||||| | |||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggtcccgaggga 399
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 624 bits (315), Expect = e-176 Identities = 442/483 (91%), Gaps = 1/483 (0%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 127471 ccagtgag-acgatgggggataagcttcattgtcgagaggggaacagcccagatcaccag 127413 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||||| |||||||| |||||||||| || |||||||||||||||||| Sbjct: 127412 ctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccagga 127353 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 127352 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctc 127293 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 || ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||| Sbjct: 127292 ttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacat 127233 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 |||||||||||||||||| | ||| |||||| ||| ||| || || ||||||||| Sbjct: 127232 cggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcg 127173 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127172 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 127113 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127112 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 127053 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| Sbjct: 127052 aaaggcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgag 126993 Query: 516 gga 518 ||| Sbjct: 126992 gga 126990 Score = 624 bits (315), Expect = e-176 Identities = 442/483 (91%), Gaps = 1/483 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 95976 ccagtgag-acgatgggggataagcttcattgtcgagaggggaacagcccagatcaccag 96034 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||||| |||||||| |||||||||| || |||||||||||||||||| Sbjct: 96035 ctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccagga 96094 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 96095 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctc 96154 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 275 || ||| ||| ||||||||| ||||| | ||||||||||||||| ||||||||| ||| Sbjct: 96155 ttacgccgaaaatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacat 96214 Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 |||||||||||||||||| | ||| |||||| ||| ||| || || ||||||||| Sbjct: 96215 cggtaggggagcgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcg 96274 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96275 gaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 96334 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96335 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 96394 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggtacggag 515 |||||||||||||||||||||||||| |||||||||||||||| |||||||||| | ||| Sbjct: 96395 aaaggcgtagtcgatggacaacaggtgaatattcctgtactactccttgttggtcccgag 96454 Query: 516 gga 518 ||| Sbjct: 96455 gga 96457
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 595 bits (300), Expect = e-167 Identities = 420/459 (91%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 1081 tgggggataagcttcatcgtcaagagggaaacagcccagaccaccagctaaggcccctaa 1140 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 1141 atgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaa 1200 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1201 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1260 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggtaggggag 286 ||||||| ||||||| |||||||||||||||||||||| | | ||||||||||||||| Sbjct: 1261 gaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggtaggggag 1320 Query: 287 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 346 |||||||| | | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1321 cgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagtgagaat 1380 Query: 347 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 406 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1381 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1440 Query: 407 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 466 ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||| Sbjct: 1441 tccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagt 1500 Query: 467 cgatggacaacaggtcaatattcctgtactaccccttgt 505 |||||||||||||||||| |||||||||||||||||||| Sbjct: 1501 cgatggacaacaggtcaagattcctgtactaccccttgt 1539
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 595 bits (300), Expect = e-167 Identities = 424/463 (91%), Gaps = 3/463 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct: 953 gccagtgag-acggtgggggataagcttcatcgtcaagaggggaacagcccagaccacca 1011 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| Sbjct: 1012 gctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagg 1071 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1072 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 1131 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatg 272 ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| Sbjct: 1132 cttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaaga 1191 Query: 273 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 332 ||||||||||||||||||| || ||| | |||||| |||||||| | || |||||| Sbjct: 1192 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 1251 Query: 333 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 392 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1311 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1312 aacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgagg 1371 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 1372 ccgaaaggcgcagtcgatggacaacaggttaatattcctgtac 1414
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 591 bits (298), Expect = e-166 Identities = 418/457 (91%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 964 tgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggcccctaa 1023 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 1024 atgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaa 1083 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1084 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1143 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggag 286 ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1144 gaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggtaggggag 1203 Query: 287 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 346 |||||||| || | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1204 cgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagtgagaat 1263 Query: 347 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 406 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1264 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1323 Query: 407 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 466 ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||| Sbjct: 1324 tccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagt 1383 Query: 467 cgatggacaacaggtcaatattcctgtactacccctt 503 |||||||||||||||||| ||||||||||||| |||| Sbjct: 1384 cgatggacaacaggtcaagattcctgtactactcctt 1420
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 591 bits (298), Expect = e-166 Identities = 418/457 (91%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 977 tgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggcccctaa 1036 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 1037 atgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaa 1096 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1097 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1156 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggag 286 ||||||| ||||||| |||||||||||||||||||||| | ||||||||||||||| Sbjct: 1157 gaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggtaggggag 1216 Query: 287 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 346 |||||||| || | |||||| | | | || | || || ||||||||||||| |||||| Sbjct: 1217 cgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagtgagaat 1276 Query: 347 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 406 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1277 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcc 1336 Query: 407 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 466 ||||||||| |||||||||||||||||||||||||||||||||| |||||| |||| ||| Sbjct: 1337 tccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacggcgcagt 1396 Query: 467 cgatggacaacaggtcaatattcctgtactacccctt 503 |||||||||||||||||| ||||||||||||| |||| Sbjct: 1397 cgatggacaacaggtcaagattcctgtactactcctt 1433
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 585 bits (295), Expect = e-164 Identities = 445/492 (90%), Gaps = 6/492 (1%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 138309 gggtgaaggtcggccagtgag-acggtgggggataagcttcaccgtcgagaggggaacag 138251 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| |||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| Sbjct: 138250 cccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgca 138191 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 138190 aagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcac 138131 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||| ||||| | ||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 138130 tgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtggga 138071 Query: 263 tgtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaa 317 |||| | ||| |||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 138070 tgtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcga 138011 Query: 318 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 377 || || | |||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 138010 gcaggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgaga 137951 Query: 378 atccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 437 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 137950 atccaatgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtca 137891 Query: 438 gggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 137890 gggcctaagatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtacta 137831 Query: 498 ccccttgttggt 509 ||| | |||||| Sbjct: 137830 cccatcgttggt 137819 Score = 585 bits (295), Expect = e-164 Identities = 445/492 (90%), Gaps = 6/492 (1%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||| Sbjct: 83568 gggtgaaggtcggccagtgag-acggtgggggataagcttcaccgtcgagaggggaacag 83626 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||| |||||||||||||||||||| ||||||||||||||| | |||||||| || ||||| Sbjct: 83627 cccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgca 83686 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||||| Sbjct: 83687 aagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgtagtagctcac 83746 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||| ||||| | ||||| || |||||||||| ||||||| |||||||||||||||||| Sbjct: 83747 tgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaagctgtggga 83806 Query: 263 tgtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagcaaccgcgaaa 317 |||| | ||| |||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 83807 tgtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagcaccagcgcga 83866 Query: 318 gcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgaga 377 || || | |||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 83867 gcaggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaacattggtgaga 83926 Query: 378 atccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtca 437 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83927 atccaatgccccgaaaacccaagggttcctccgcaaggttcgtccacggagggtgagtca 83986 Query: 438 gggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 83987 gggcctaagatcaggccgagaggcgtagtcgatggacaacaggcgaatattcctgtacta 84046 Query: 498 ccccttgttggt 509 ||| | |||||| Sbjct: 84047 cccatcgttggt 84058
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 579 bits (292), Expect = e-162 Identities = 422/463 (91%), Gaps = 3/463 (0%) Strand = Plus / Minus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct: 124312 gccagtgag-acggtgggggataagcttcatcgtcaagaggggaacagcccagaccacca 124254 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| Sbjct: 124253 gctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagg 124194 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 124193 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 124134 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--g 272 ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 124133 cttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttga 124074 Query: 273 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 332 ||||||||||||||||||| || ||| | |||||| |||||||| | || |||||| Sbjct: 124073 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 124014 Query: 333 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 392 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 124013 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 123954 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123953 aacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgagg 123894 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 123893 ccgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 123851 Score = 579 bits (292), Expect = e-162 Identities = 422/463 (91%), Gaps = 3/463 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| |||||| |||||||| || ||||| Sbjct: 95554 gccagtgag-acggtgggggataagcttcatcgtcaagaggggaacagcccagaccacca 95612 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 |||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||| Sbjct: 95613 gctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagg 95672 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95673 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgct 95732 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--g 272 ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 95733 cttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttga 95792 Query: 273 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 332 ||||||||||||||||||| || ||| | |||||| |||||||| | || |||||| Sbjct: 95793 catcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaa 95852 Query: 333 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 392 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95853 gcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 95912 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95913 aacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgagg 95972 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 95973 ccgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 96015
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 575 bits (290), Expect = e-161 Identities = 443/490 (90%), Gaps = 3/490 (0%) Strand = Plus / Minus Query: 30 ggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggat 89 |||| ||||||||| |||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgag-acgatgagggataagcttcatcgtcaagaggggaacagcccagat 5544 Query: 90 caccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 149 ||||| |||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 5543 taccagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacag 5484 Query: 150 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 209 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 5483 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcga 5424 Query: 210 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 269 |||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || || Sbjct: 5423 gcgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaa 5364 Query: 270 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 329 | ||||||||||||||||||||| | |||| |||||| ||||| ||| || || ||| Sbjct: 5363 aaacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggac 5304 Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5303 gaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 5244 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagat 448 ||||||| |||| |||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5243 gaaaacctaagggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagat 5184 Query: 449 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 508 |||||||||| | || ||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 5183 caggccgaaacg-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttgg 5125 Query: 509 tacggaggga 518 | | |||||| Sbjct: 5124 tcccgaggga 5115
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 565 bits (285), Expect = e-158 Identities = 411/453 (90%) Strand = Plus / Plus Query: 51 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110 |||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||| Sbjct: 5017 ggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaaggcccctaaat 5076 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 | ||||| |||| ||||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 5077 ggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtttgcctagaagc 5136 Query: 171 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 230 ||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 5137 agccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatga 5196 Query: 231 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 290 ||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 5197 acgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcgtt 5256 Query: 291 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 350 |||| ||| | |||||| | | | || | || || |||||||||||||||||||||||| Sbjct: 5257 ccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgtcg 5316 Query: 351 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 410 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 5317 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 5376 Query: 411 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 470 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5377 caaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcgcagtcgat 5436 Query: 471 ggacaacaggtcaatattcctgtactacccctt 503 |||||||||| ||||||||||||| ||||||| Sbjct: 5437 ggacaacaggcgaatattcctgtaccacccctt 5469
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 565 bits (285), Expect = e-158 Identities = 411/453 (90%) Strand = Plus / Plus Query: 51 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110 |||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||| Sbjct: 984 ggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaaggcccctaaat 1043 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 | ||||| |||| ||||||||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 1044 ggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggtttgcctagaagc 1103 Query: 171 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 230 ||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 1104 agccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatga 1163 Query: 231 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 290 ||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1164 acgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcgtt 1223 Query: 291 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 350 |||| ||| | |||||| | | | || | || || |||||||||||||||||||||||| Sbjct: 1224 ccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgtcg 1283 Query: 351 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 410 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 1284 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 1343 Query: 411 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 470 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1344 caaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcgcagtcgat 1403 Query: 471 ggacaacaggtcaatattcctgtactacccctt 503 |||||||||| ||||||||||||| ||||||| Sbjct: 1404 ggacaacaggcgaatattcctgtaccacccctt 1436
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 557 bits (281), Expect = e-155 Identities = 410/453 (90%) Strand = Plus / Plus Query: 51 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110 |||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||||| Sbjct: 984 ggggataagctttatcgtcaaaagggaaacagcccagatcaccagctaaggcccctaaat 1043 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 | ||||| |||| ||||| ||||||| ||||||||||| ||| |||||||||||||||| Sbjct: 1044 ggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggtttgcctagaagc 1103 Query: 171 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 230 ||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 1104 agccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatga 1163 Query: 231 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 290 ||||| ||||||| ||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1164 acgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtaggggagcgtt 1223 Query: 291 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 350 |||| ||| | |||||| | | | || | || || |||||||||||||||||||||||| Sbjct: 1224 ccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcgagaatgtcg 1283 Query: 351 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 410 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 1284 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 1343 Query: 411 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 470 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1344 caaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcgcagtcgat 1403 Query: 471 ggacaacaggtcaatattcctgtactacccctt 503 |||||||||| ||||||||||||| ||||||| Sbjct: 1404 ggacaacaggcgaatattcctgtaccacccctt 1436
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 551 bits (278), Expect = e-154 Identities = 397/429 (92%), Gaps = 7/429 (1%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 974 gggttaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 1032 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1033 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1092 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1093 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1152 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1212 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaac--cgcgaaagcg 320 ||| |||||||||||||||||||||||||||||||| | |||| || | |||||| | Sbjct: 1213 tgtaaaaatgcatcggtaggggagcgttccgccttaaaaggaaacacccgcgcgaacaag 1272 Query: 321 ggggtcgacgaagcgg-aagcgagaatgtcggcttgagtaacg-aaaaca-ttggtgaga 377 ||| | |||||| ||| || | ||||||||||||||||||||| |||||| ||||||||| Sbjct: 1273 gggttggacgaaacggaaaccaagaatgtcggcttgagtaacgcaaaacatttggtgaga 1332 Query: 378 atccaatgccccgaaaacccaaggtttcctccgc-aaggttcgtccacggagggtgagtc 436 ||| ||||||||||||||| || | ||||||| | ||||||||||||||||||||||||| Sbjct: 1333 atctaatgccccgaaaacctaaaggttcctccccaaaggttcgtccacggagggtgagtc 1392 Query: 437 agggcctaa 445 | ||||||| Sbjct: 1393 aaggcctaa 1401
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 549 bits (277), Expect = e-153 Identities = 409/453 (90%) Strand = Plus / Plus Query: 51 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110 |||||||||||| |||||| ||||||||||||||| || ||||||||||||||||||||| Sbjct: 979 ggggataagctttatcgtcaagagggaaacagcccagaccaccagctaaggcccctaaat 1038 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 | ||||| |||| ||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1039 ggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggtttgcctagaagc 1098 Query: 171 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 230 ||||| |||| |||||||||||||||||||||||||| ||||| || |||| |||||||| Sbjct: 1099 agccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcgcgccgaagatga 1158 Query: 231 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 290 | ||| ||||||| |||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1159 atgggactaagcggtctgccgaagctgtgggatgctaaaatacatcggtaggggagcgtt 1218 Query: 291 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 350 |||| ||| | |||||| | | | || | | || |||||||||||||||||||||||| Sbjct: 1219 ccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaagcgagaatgtcg 1278 Query: 351 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 410 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 1279 gcttgagtaacggaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 1338 Query: 411 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 470 ||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||| Sbjct: 1339 caaggttcgtccacggagggttagtcagggcctaagattaggccgaaaggcgcagtcgat 1398 Query: 471 ggacaacaggtcaatattcctgtactacccctt 503 |||||||||| ||||||||||||| ||||||| Sbjct: 1399 ggacaacaggcgaatattcctgtaccacccctt 1431
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 549 bits (277), Expect = e-153 Identities = 316/329 (96%) Strand = Plus / Plus Query: 190 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 249 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 250 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 309 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 310 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 369 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 370 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 429 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 430 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 490 ctgtactaccccttgttggtacggaggga 518 |||||||||||||||||||| | |||||| Sbjct: 1055 ctgtactaccccttgttggtcccgaggga 1083
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 545 bits (275), Expect = e-152 Identities = 282/283 (99%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 578 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 636 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 696 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 756 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 816 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 305 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 859 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 585 cttgacccctgttatttttgggtca 561
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 525 bits (265), Expect = e-146 Identities = 407/454 (89%), Gaps = 4/454 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||| | ||||||||||||| |||||| |||||||||||| || Sbjct: 923 tgggggataagcttcatcgtcaaaagggaaacagcccagatcactagctaaggccccaaa 982 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 983 atgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggaggtttgcctagaa 1042 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1043 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1102 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgcatcggtagggg 284 ||| ||| ||||||| |||||||||||||||||||||| | || ||||||||||| Sbjct: 1103 gaatgggactaagcggtctgccgaagctgtgggatgtctattataagatatcggtagggg 1162 Query: 285 agcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgaga 344 |||||||||||||||| |||||| ||| |||| | || ||||||||||||| |||| Sbjct: 1163 agcgttccgccttagatagaagcattagcgtaagcagatgtggacgaagcggaagtgaga 1222 Query: 345 atgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggttt 404 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 1223 atgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggtt 1282 Query: 405 cctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgta 464 ||||||||||| ||||||||||||||||||||||| |||||| | || || || || | | Sbjct: 1283 cctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagaccaaatggtgca 1342 Query: 465 gtcgatggacaacaggtcaatattcctgtactac 498 | |||||||||||||| ||||||||||||||| Sbjct: 1343 attgatggacaacaggtttatattcctgtactac 1376
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 523 bits (264), Expect = e-145 Identities = 418/468 (89%), Gaps = 6/468 (1%) Strand = Plus / Plus Query: 34 ggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 93 |||||||||| || |||||||||||||||||||||| |||||| |||||||| ||||||| Sbjct: 1000 ggccagtgag-accatgggggataagcttcatcgtcaagaggggaacagcccagatcacc 1058 Query: 94 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 153 |||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||||||| Sbjct: 1059 agctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccag 1118 Query: 154 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 213 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1119 gaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgc 1178 Query: 214 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgc 273 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | | Sbjct: 1179 tcttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----c 1233 Query: 274 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 333 |||||||||||||||||| |||||| ||||||||| | || ||| | ||| || |||| Sbjct: 1234 atcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaag 1293 Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1294 cagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1353 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 ||| |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| | Sbjct: 1354 acctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatac 1413 Query: 454 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 |||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 1414 tgaaaggtttagttgatggacaataggttaatattcctgtactacccc 1461
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 482 bits (243), Expect = e-133 Identities = 396/447 (88%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||| | |||| |||||||| || |||||| |||||||||||| Sbjct: 3998 tgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggcccctaa 4057 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| |||| |||||||||| | ||||| ||||||||||||||||||| ||||| Sbjct: 4058 ataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgcttagaa 4117 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 4118 gcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 4177 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| ||||||||| ||||||| ||||||||||| || | |||||||||||||||| Sbjct: 4178 gaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtaggggagcg 4237 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| || ||||| |||||| | | |||| | | || |||||||| |||| |||||||| Sbjct: 4238 ttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtgagaatgt 4297 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 4298 cggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaagggttcctc 4357 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| Sbjct: 4358 cgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcgcaatcg 4417 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||| ||||||||||||||||| Sbjct: 4418 atggataactggtcaatattcctgtac 4444
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 478 bits (241), Expect = e-132 Identities = 412/467 (88%), Gaps = 4/467 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 915 gccagtgag-acggtgggggataagctccatcgtcgaaagggaaacagcccagatcacca 973 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 | ||||||||||||||||||||| |||||||||||| ||| | ||||||||||||||||| Sbjct: 974 gttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagg 1033 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1034 aggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgct 1093 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--- 271 ||||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1094 cttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatata 1153 Query: 272 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 331 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| | Sbjct: 1154 acatcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaa 1213 Query: 332 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 391 |||||||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||| Sbjct: 1214 agcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccga 1273 Query: 392 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 451 |||||||||| ||||| || ||||||||||| || |||||||||||| |||||| | | Sbjct: 1274 aaacccaaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaa 1333 Query: 452 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 498 ||| || ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1334 gccaaacggcgtagtcgatggataacaggttaatattcctgtactac 1380
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 470 bits (237), Expect = e-129 Identities = 410/466 (87%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 952 ccagtgag-acggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 1010 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||| Sbjct: 1011 ctaaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccagga 1070 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1071 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1130 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--- 272 |||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1131 ttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggag 1190 Query: 273 -catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 331 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||| Sbjct: 1191 atatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacga 1250 Query: 332 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 391 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1251 agcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccga 1310 Query: 392 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 451 ||||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| || Sbjct: 1311 aaacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaag 1370 Query: 452 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1371 gccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 1416
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 470 bits (237), Expect = e-129 Identities = 410/466 (87%), Gaps = 5/466 (1%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 114710 ccagtgag-acggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 114652 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||| Sbjct: 114651 ctaaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccagga 114592 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 114591 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 114532 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--- 272 |||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114531 ttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggag 114472 Query: 273 -catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 331 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||| Sbjct: 114471 atatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacga 114412 Query: 332 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 391 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 114411 agcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccga 114352 Query: 392 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 451 ||||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| || Sbjct: 114351 aaacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaag 114292 Query: 452 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114291 gccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 470 bits (237), Expect = e-129 Identities = 410/466 (87%), Gaps = 5/466 (1%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 87278 ccagtgag-acggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 87336 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| |||||| Sbjct: 87337 ctaaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccagga 87396 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 87397 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 87456 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--- 272 |||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87457 ttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggag 87516 Query: 273 -catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 331 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || ||||| Sbjct: 87517 atatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacga 87576 Query: 332 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 391 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 87577 agcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccga 87636 Query: 392 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 451 ||||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| || Sbjct: 87637 aaacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaag 87696 Query: 452 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87697 gccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 87742
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 470 bits (237), Expect = e-129 Identities = 386/428 (90%), Gaps = 7/428 (1%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 974 gggttaaggtcggccagtgag-acgatgggggataagcttcatcgtccagagggaaacag 1032 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1033 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1092 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||| |||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1093 cagacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgtaataactcac 1152 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1212 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||| ||||||||||||||| ||||| ||||||||| |||| ||| | Sbjct: 1213 tgtaaaaatgcatccgtaggggagcgttcccccttatagggaagcacccgccccagcaag 1272 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca-ttggtgagaatcc 381 ||| |||||| | | | | | |||||| ||||||||| ||||| ||||||||||||| Sbjct: 1273 ggtggacgaaaccg-atctaaaatgtccccttgagtaaaccaaacatttggtgagaatcc 1331 Query: 382 aatgccccgaaaacccaaggtttcctccgc-aaggttcgtccacgga--gggtgagtc-a 437 |||||||| |||||| |||| ||||||| | |||||||||||||||| ||||||||| | Sbjct: 1332 aatgcccccaaaacctaagggttcctccccaaaggttcgtccacggatggggtgagtcaa 1391 Query: 438 gggcctaa 445 |||||||| Sbjct: 1392 gggcctaa 1399
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 458 bits (231), Expect = e-126 Identities = 393/447 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||| | |||| |||||||| || |||||| |||||||||||| Sbjct: 964 tgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggcccctaa 1023 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| |||| |||||||||| | ||||| ||||||||||||||||||| ||||| Sbjct: 1024 ataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgcttagaa 1083 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1084 gcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1143 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||||||||| Sbjct: 1144 gaatgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtaggggagcg 1203 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| || |||| |||||| | | |||| | | || |||||||| |||| |||||||| Sbjct: 1204 ttctgctatagattgaagcatcagtgaaaacagatgtggacgaagcagaagtgagaatgt 1263 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||| ||||||||||||||||||||| |||| |||||| Sbjct: 1264 cggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaagggttcctc 1323 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| Sbjct: 1324 cgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcgcaatcg 1383 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||| ||| ||||||||||||| Sbjct: 1384 atggataacgggttaatattcctgtac 1410
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 458 bits (231), Expect = e-126 Identities = 394/447 (88%), Gaps = 1/447 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||| | |||| |||||||| || |||||| |||||||||||| Sbjct: 964 tgggggataagcttcatcgtcaaaaggggaacagcccagaccaccagttaaggcccctaa 1023 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| |||| |||||||||| | ||||| ||||||||||||||||||| ||||| Sbjct: 1024 ataatcgctaagtggcaaaggaggtgagagtgcagagacagccaggaggtttgcttagaa 1083 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1084 gcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1143 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||| ||| ||||||||| ||||||| ||||||||||| || | |||||||||||||||| Sbjct: 1144 gaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacatcggtaggggagcg 1202 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| || ||||| |||||| | | |||| | | || |||||||| |||| |||||||| Sbjct: 1203 ttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtgagaatgt 1262 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1263 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1322 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||| Sbjct: 1323 cgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgacaggcgcaatcg 1382 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||| ||| ||||||||||||| Sbjct: 1383 atggataacgggttaatattcctgtac 1409
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 450 bits (227), Expect = e-123 Identities = 261/271 (96%), Gaps = 1/271 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130837 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 130779 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130778 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 130719 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 130718 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 130659 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 130658 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 130599 Query: 263 tgtcaaaatgcatcggtaggggagcgttccg 293 ||| |||| ||||||||||||||||||||| Sbjct: 130598 tgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 450 bits (227), Expect = e-123 Identities = 261/271 (96%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 102608 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 102666 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102667 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 102726 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102727 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 102786 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct: 102787 tgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagctgtggga 102846 Query: 263 tgtcaaaatgcatcggtaggggagcgttccg 293 ||| |||| ||||||||||||||||||||| Sbjct: 102847 tgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 333 bits (168), Expect = 3e-88 Identities = 186/192 (96%) Strand = Plus / Minus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 506 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 507 ggtacggaggga 518 ||| | |||||| Sbjct: 130354 ggtcccgaggga 130343 Score = 333 bits (168), Expect = 3e-88 Identities = 186/192 (96%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 506 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 507 ggtacggaggga 518 ||| | |||||| Sbjct: 103091 ggtcccgaggga 103102
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 440 bits (222), Expect = e-120 Identities = 271/286 (94%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 960 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtccagagggaaacag 1018 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1019 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1078 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1079 gagacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgtaatagctcac 1138 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 1139 tgatcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccgaagctgtggga 1198 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 308 ||| |||| ||||||||||||||||||||| |||| |||||||| Sbjct: 1199 tgtaaaaaaacatcggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 434 bits (219), Expect = e-118 Identities = 268/283 (94%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 962 gggttaaggtcggccagtgag-acaatgggggataagcttcatcgtcgagagggaaacag 1020 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 1021 cccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgca 1080 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1081 cagacagccacgaggtttgcctataagcagccacccttgaaagagtgcgtaatagctcac 1140 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1141 tgatcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccgaagctgtggga 1200 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 305 ||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 1201 tgtaaaaatgcatcggtaggggagcgttcccccttagagggaa 1243 Score = 77.8 bits (39), Expect = 3e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 351 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 409 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 410 gc-aaggttcgtccacggagggt 431 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 434 bits (219), Expect = e-118 Identities = 376/423 (88%), Gaps = 4/423 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| |||||||||||||||| || |||||||||||||||||||||| |||||||||||| Sbjct: 973 gggttaaggtcggccagtgag-accatgggggataagcttcatcgtccagagggaaacag 1031 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1032 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1091 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1092 gagacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1151 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||| ||||| ||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 1152 tgatccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagctgtggga 1211 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||| |||||||||| ||||||||||||||| ||||| |||||| || || | | | | Sbjct: 1212 tgtaaaaatgcatccgtaggggagcgttcccccttaaagggaaacaccccccccaacatg 1271 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| ||| || ||||| | |||||||| || | ||||||| ||||||||||||||||| | Sbjct: 1272 ggtggaccaaacggaaaccagaatgtccgccttagtaacgcaaacattggtgagaatcta 1331 Query: 383 atgccccg-aaaacccaaggtttcctccgcaa-ggttcgtccacgga-gggtgagtcagg 439 ||||||| |||| | || | ||||||| ||| ||||||||||| || |||||||||| | Sbjct: 1332 atgccccccaaaaactaaaggttcctccccaaaggttcgtccaccgaggggtgagtcaag 1391 Query: 440 gcc 442 ||| Sbjct: 1392 gcc 1394
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 430 bits (217), Expect = e-117 Identities = 272/289 (94%), Gaps = 1/289 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||| ||||||||||| |||| |||||||||||||||||||||| || |||||||||||| Sbjct: 968 gggttaaggtcggccaatgag-acgatgggggataagcttcatcttccagagggaaacag 1026 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1027 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1086 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1087 aagacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1146 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 1147 tgatcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccgaagctgtggga 1206 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaacc 311 ||| ||||||||||||||||||||||||||||| || |||||| ||||| Sbjct: 1207 tgtaaaaatgcatcggtaggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 364 aaacattggtgagaatccaatgccccgaaaa 394 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 428 bits (216), Expect = e-117 Identities = 275/292 (94%), Gaps = 2/292 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 935 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 993 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 994 cccggatcaccagctaaggcccctaaatgaccgcccagtgataaaggaggtaggggtgca 1053 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1054 gagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcac 1113 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1114 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtggga 1173 Query: 263 tgtcaaaatgcatcggta-ggggagcgttccgccttagagggaagcaaccgc 313 ||| |||| |||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1174 tgtaaaaaaacatccgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 422 bits (213), Expect = e-115 Identities = 235/241 (97%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 24 ggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagc 83 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 433 ggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagc 491 Query: 84 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 492 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 551 Query: 144 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 203 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 552 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 611 Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggat 671 Query: 264 g 264 | Sbjct: 672 g 672
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 412 bits (208), Expect = e-112 Identities = 332/372 (89%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 |||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||| Sbjct: 2867 gggtcaaggtcggcgagtgag-acgacgagggataagcttcatcgtcgagagggaaacaa 2809 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 || |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 2808 cctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtaggggtgca 2749 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| Sbjct: 2748 aagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagctcac 2689 Query: 203 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 262 | ||||||||| ||||| | |||||||| ||||||||||||||| |||||| ||||| Sbjct: 2688 taatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctatggga 2629 Query: 263 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 322 ||||||||||||||| |||||||||||||||||||||||||||||| | || || | Sbjct: 2628 tgtcaaaatgcatcgataggggagcgttccgccttagagggaagcacctgcacgagtagt 2569 Query: 323 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 382 ||| || || ||||||||| |||||||||||| ||| | ||||||||||||||||||| Sbjct: 2568 ggtggaagaggcggaagcgggaatgtcggcttttttaaggcaaacattggtgagaatcca 2509 Query: 383 atgccccgaaaa 394 |||||| ||||| Sbjct: 2508 atgccctgaaaa 2497 Score = 149 bits (75), Expect = 1e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 403 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 462 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 463 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 509 |||||||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggt 2376
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 408 bits (206), Expect = e-111 Identities = 247/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 27 caaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccg 86 |||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 177802 caaggtcggctagtgag-acgatgggggataagcttcatcgtcgagagggaaagagcccg 177860 Query: 87 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 146 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 177861 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagaga 177920 Query: 147 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat 206 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 177921 cagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgat 177980 Query: 207 cgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgt 265 ||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 177981 cgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccgaagctgtgggatgt 178040 Query: 266 caaaatgcatcggtaggg 283 |||||| |||||| |||| Sbjct: 178041 caaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 99 aggcccctaaatgaccgctcag 120 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gtcgagagggaaacagcccggatc 90 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 gtcgagagggaaacagcccggatc 90 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 406 bits (205), Expect = e-110 Identities = 370/425 (87%), Gaps = 5/425 (1%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 2517 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 2576 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||||||||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2577 ataattgctaagtgataaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 2636 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 2637 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 2696 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| |||||| || ||||||||||||||||| ||| ||||||||||||||| Sbjct: 2697 gaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggtaggggagcg 2751 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| || ||||| |||||| ||| ||||||| || |||||||| |||| |||||||| Sbjct: 2752 ttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaagtgagaatgt 2811 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2812 cggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggtttcctc 2871 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 | ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 2872 tggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 2931 Query: 469 atgga 473 ||||| Sbjct: 2932 atgga 2936
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 394 bits (199), Expect = e-106 Identities = 221/227 (97%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 24 ggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagc 83 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagc 507 Query: 84 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 143 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 508 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 567 Query: 144 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 203 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 568 agacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 627 Query: 204 gatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 250 |||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 628 gatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 389 bits (196), Expect = e-105 Identities = 385/447 (86%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 189884 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 189943 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 189944 ataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 190003 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 190004 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 190063 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| ||||| || ||||||||||||||||||| || |||||||||||||||| Sbjct: 190064 gaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggtaggggagcg 190121 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 190122 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 190181 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 190182 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 190241 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 || ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 190242 cggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 190301 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||||||| ||||||||||||| Sbjct: 190302 atggataacaggttaatattcctgtac 190328 Score = 389 bits (196), Expect = e-105 Identities = 385/447 (86%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 151311 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggcccctaa 151370 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 151371 ataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 151430 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 151431 gcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 151490 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| ||||| || ||||||||||||||||||| || |||||||||||||||| Sbjct: 151491 gaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcggtaggggagcg 151548 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| | |||| |||||| ||||||||||| || ||| || | |||| |||||||| Sbjct: 151549 ttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaatgt 151608 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 151609 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 151668 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 || ||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||| Sbjct: 151669 cggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagtcg 151728 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||||||| ||||||||||||| Sbjct: 151729 atggataacaggttaatattcctgtac 151755
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 387 bits (195), Expect = e-104 Identities = 214/219 (97%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 26 tcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagccc 85 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122249 tcaaagtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagcct 122191 Query: 86 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 145 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122190 ggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaag 122131 Query: 146 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122130 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaa 122071 Query: 206 tcgagcgcccttgcgctgaagatgaacggggctaagcga 244 ||||||||||||||||||||||||||||||||||||||| Sbjct: 122070 tcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 387 bits (195), Expect = e-104 Identities = 214/219 (97%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 26 tcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagccc 85 |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824790 tcaaagtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacagcct 12824732 Query: 86 ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaag 145 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12824731 ggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaag 12824672 Query: 146 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 12824671 acagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaa 12824612 Query: 206 tcgagcgcccttgcgctgaagatgaacggggctaagcga 244 ||||||||||||||||||||||||||||||||||||||| Sbjct: 12824611 tcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573 Score = 87.7 bits (44), Expect = 3e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 402 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 381 bits (192), Expect = e-102 Identities = 384/447 (85%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||| || Sbjct: 188961 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggccccaaa 189020 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | || |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 189021 ataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 189080 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 189081 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 189140 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 189141 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 189198 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 189199 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 189258 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 189259 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 189318 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 || ||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 189319 cggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagtcg 189378 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||||||| ||||||||||||| Sbjct: 189379 atggataacaggttaatattcctgtac 189405 Score = 381 bits (192), Expect = e-102 Identities = 384/447 (85%), Gaps = 2/447 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||||||| || Sbjct: 150518 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggccccaaa 150577 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | || |||| |||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 150578 ataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggtttgcttagaa 150637 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 150638 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctgcgccgaaaat 150697 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||| ||||| || ||||||||||||||||||| | | |||||||||||||||| Sbjct: 150698 gaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggagcg 150755 Query: 289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 348 ||| | |||| |||||| ||||||||||| || ||| || | ||||||||||||| Sbjct: 150756 ttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaatgt 150815 Query: 349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 408 |||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 150816 cggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcctc 150875 Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 || ||||||||||| ||||||||||||||||||||||| |||| |||| ||||||||| Sbjct: 150876 cggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagtcg 150935 Query: 469 atggacaacaggtcaatattcctgtac 495 ||||| ||||||| ||||||||||||| Sbjct: 150936 atggataacaggttaatattcctgtac 150962
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 365 bits (184), Expect = 1e-97 Identities = 187/188 (99%) Strand = Plus / Minus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 511 cggaggga 518 |||||||| Sbjct: 5634368 cggaggga 5634361
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 365 bits (184), Expect = 1e-97 Identities = 191/192 (99%), Gaps = 1/192 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 759 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 817 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 877 Query: 143 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 878 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 937 Query: 203 tgatcgagcgcc 214 |||||||||||| Sbjct: 938 tgatcgagcgcc 949 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 766 cttgacccctgttatttttgggtca 742
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 365 bits (184), Expect = 1e-97 Identities = 187/188 (99%) Strand = Plus / Minus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 511 cggaggga 518 |||||||| Sbjct: 5634357 cggaggga 5634350
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 365 bits (184), Expect = 1e-97 Identities = 187/188 (99%) Strand = Plus / Plus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 510 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 511 cggaggga 518 |||||||| Sbjct: 18517 cggaggga 18524
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 959 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1018 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1019 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1078 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1079 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1138 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1139 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1193 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1194 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1253 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1254 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1314 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1373 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1374 gatggacaatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 959 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1018 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1019 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1078 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1079 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1138 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1139 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1193 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1194 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1253 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1254 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1314 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1373 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1374 gatggacaatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 959 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1018 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1019 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1078 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1079 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1138 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1139 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1193 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1194 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1253 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1254 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1314 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1373 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1374 gatggacaatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| || | ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| |||| ||||||| ||||||||||| Sbjct: 1375 gatggacaataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 361 bits (182), Expect = 1e-96 Identities = 386/454 (85%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 aggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 361 bits (182), Expect = 1e-96 Identities = 383/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||| |||||||||||||| | |||||||||| |||||||| || || | | Sbjct: 942 ccagtgag-acgaagggggataagcttctttgtcgagaggggaacagcccagaccatcgg 1000 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||| Sbjct: 1001 ctaaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccagga 1060 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1061 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctc 1120 Query: 216 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 274 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| ||| Sbjct: 1121 ccgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagca 1179 Query: 275 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 334 |||||||||||||||||||| || ||||| |||| ||| || || ||||| || Sbjct: 1180 tcggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggc 1239 Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 1240 ggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaa 1299 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 ||||||| |||| | | |||| |||||||||| ||||||||||||||||||| | ||||| Sbjct: 1300 cccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggcc 1359 Query: 455 gaaaggcgtagtcgatggacaacagg 480 ||| |||| || |||||||||||||| Sbjct: 1360 gaagggcgcagccgatggacaacagg 1385
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 361 bits (182), Expect = 1e-96 Identities = 383/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||| |||||||||||||| | |||||||||| |||||||| || || | | Sbjct: 955 ccagtgag-acgaagggggataagcttctttgtcgagaggggaacagcccagaccatcgg 1013 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||| Sbjct: 1014 ctaaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccagga 1073 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1074 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctc 1133 Query: 216 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 274 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| ||| Sbjct: 1134 ccgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagca 1192 Query: 275 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 334 |||||||||||||||||||| || ||||| |||| ||| || || ||||| || Sbjct: 1193 tcggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggc 1252 Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 1253 ggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaa 1312 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 ||||||| |||| | | |||| |||||||||| ||||||||||||||||||| | ||||| Sbjct: 1313 cccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggcc 1372 Query: 455 gaaaggcgtagtcgatggacaacagg 480 ||| |||| || |||||||||||||| Sbjct: 1373 gaagggcgcagccgatggacaacagg 1398
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 361 bits (182), Expect = 1e-96 Identities = 383/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| |||| |||||||||||||| | |||||||||| |||||||| || || | | Sbjct: 5529 ccagtgag-acgaagggggataagcttctttgtcgagaggggaacagcccagaccatcgg 5587 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| ||||| |||| |||||| ||||| |||| |||||||||||| Sbjct: 5588 ctaaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccagga 5647 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5648 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctc 5707 Query: 216 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 274 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| ||| Sbjct: 5708 ccgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagca 5766 Query: 275 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 334 |||||||||||||||||||| || ||||| |||| ||| || || ||||| || Sbjct: 5767 tcggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggc 5826 Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 5827 ggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaa 5886 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 ||||||| |||| | | |||| |||||||||| ||||||||||||||||||| | ||||| Sbjct: 5887 cccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggcc 5946 Query: 455 gaaaggcgtagtcgatggacaacagg 480 ||| |||| || |||||||||||||| Sbjct: 5947 gaagggcgcagccgatggacaacagg 5972
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 57 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 116 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 117 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 176 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 177 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 237 ctaagcgatctgccgaagctgtgggatgtcaaaat 271 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 57 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 116 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 117 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 176 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 177 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 237 ctaagcgatctgccgaagctgtgggatgtcaaaat 271 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 353 bits (178), Expect = 4e-94 Identities = 385/454 (84%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || |||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 353 bits (178), Expect = 4e-94 Identities = 385/454 (84%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| | ||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 353 bits (178), Expect = 4e-94 Identities = 385/454 (84%), Gaps = 5/454 (1%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||| Sbjct: 960 atgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggccccta 1019 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 ||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||| Sbjct: 1020 aatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctaga 1079 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| | Sbjct: 1080 agaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaata 1139 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||||||| || || ||| ||||||| ||||||||| | |||||| |||||||| Sbjct: 1140 tgaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagc 1194 Query: 288 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 347 |||| |||||| | ||||||| | || || | ||| || ||||| |||| ||||||| Sbjct: 1195 gttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatg 1254 Query: 348 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 407 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314 Query: 408 ccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtc 467 | |||||||| |||||| ||||||||||||| | |||||||| | |||||| ||| Sbjct: 1315 tcacaaggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagct 1374 Query: 468 gatggacaacaggtcaatattcctgtactacccc 501 ||||||||| || | ||||||| ||||||||||| Sbjct: 1375 gatggacaatagattaatattcttgtactacccc 1408
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 337 bits (170), Expect = 2e-89 Identities = 380/446 (85%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagccc-ggatcaccagctaaggcccctaaat 110 |||||||||||||| ||||| ||||||||||||| ||| |||| |||||||||||| ||| Sbjct: 968 gggataagcttcattgtcgaaagggaaacagcccaggaccaccggctaaggcccctcaat 1027 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 || || ||||| ||||| ||| | ||||| ||||| |||| |||||||||||||||| Sbjct: 1028 gattcctaagtgacgaaggatgtgagagtgcagagacaaccagaaggtttgcctagaagc 1087 Query: 171 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 230 |||||||||| |||||||||||||||||||||||||| ||||| || |||| ||| |||| Sbjct: 1088 agccacccttgaaagagtgcgtaatagctcactgatcaagcgctctggcgccgaaaatga 1147 Query: 231 acggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 289 | ||| || ||| |||||||||||| |||| |||| ||| | ||| ||||||||||||| Sbjct: 1148 aagggactcaaggaatctgccgaagccgtggcatgt-aaattacatgggtaggggagcgt 1206 Query: 290 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 349 || | |||| ||||| |||||||| | || ||| || | |||| ||||||||| Sbjct: 1207 tctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaacagaagtgagaatgtc 1266 Query: 350 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 409 ||||||||||||| |||| | ||||||||||| |||||||||||||| |||| ||||| | Sbjct: 1267 ggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaacctaagggttccttc 1326 Query: 410 gcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcga 469 | |||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||| Sbjct: 1327 ggaaggctcgtccacgaagggtgagtcagggcctaagatgatgccgaaaggcgtagtcga 1386 Query: 470 tggacaacaggtcaatattcctgtac 495 ||||||||||||||| |||||||||| Sbjct: 1387 tggacaacaggtcaaaattcctgtac 1412
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 64 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 123 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 124 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 183 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 184 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 243 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 244 atctgccgaagctgtgggat 263 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 18079 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 18020 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 18019 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 17960 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 17959 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 17900 Query: 232 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 291 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 17899 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 17842 Query: 292 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 351 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 17841 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 17782 Query: 352 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 411 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 17781 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 17722 Query: 412 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 471 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 17721 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 17663 Query: 472 gacaacaggtcaatattcctgtact 496 || ||||||| |||||||||||||| Sbjct: 17662 gataacaggttaatattcctgtact 17638 Score = 329 bits (166), Expect = 5e-87 Identities = 377/445 (84%), Gaps = 3/445 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 ||||||||||||| ||| ||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 2787 gggataagcttcaatgtcaagagggaaacagcccagattaccagttaaggcccctaaata 2846 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 | || |||||||||||||||||| ||||| ||||| ||||||||||||||||||||| Sbjct: 2847 attactaagtgataaaggaggtgggagtgcatagacaatcaggaggtttgcctagaagca 2906 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 || | |||||||||||||||||||||||||||| ||||| || | ||||| ||| ||||| Sbjct: 2907 gcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctgcgccgaaaatgaa 2966 Query: 232 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 291 ||| ||||| || |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 2967 tgggactaagtaatttgccgaagctgtaagatgttaaaa--catcggtaggggagcgttc 3024 Query: 292 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 351 | |||| ||||| ||| ||||||| || ||| | | |||| |||||||| | Sbjct: 3025 tacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaagtgagaatgttag 3084 Query: 352 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 411 |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 3085 cttgagtagcgaaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgg 3144 Query: 412 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 471 |||| |||||| |||||||||||||||| |||||| | ||| | || ||||| |||||| Sbjct: 3145 aaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaatagcgtaatcgatg 3203 Query: 472 gacaacaggtcaatattcctgtact 496 || ||||||| |||||||||||||| Sbjct: 3204 gataacaggttaatattcctgtact 3228
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 315 bits (159), Expect = 8e-83 Identities = 376/446 (84%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 |||||||||||||| ||| | ||||||||||||| || |||||| |||||||||||||| Sbjct: 2654 gggataagcttcattgtcaaaagggaaacagcccagaccaccagttaaggcccctaaata 2713 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 || |||| |||||||||||| |||| ||| ||||||||||||| |||||||| Sbjct: 2714 gttactaagtggcaaaggaggtgggaatgcattaacaaccaggaggtttgcttagaagca 2773 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 || | |||||||||||||||||||||||||||| || || | | ||||| ||| ||||| Sbjct: 2774 gcaatcctttaaagagtgcgtaatagctcactggtctagtgatcctgcgccgaaaatgaa 2833 Query: 232 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 291 |||| ||||| | ||||||| ||||||||||| | ||||||||||||||||||||| Sbjct: 2834 cgggactaagtaacttgccgaatctgtgggatgttta--tgcatcggtaggggagcgttc 2891 Query: 292 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 351 || ||||| |||||| |||||| || || ||| |||| |||| ||||||||||| Sbjct: 2892 tgc-ttagattgaagcattaacgaaagtggatgtggacaaagcagaagtgagaatgtcgg 2950 Query: 352 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgc 411 |||||||| |||||||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 2951 cttgagtagcgaaaacattggtgagaatccaatgccccggaaacctaaggattcctctgg 3010 Query: 412 aaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatg 471 |||| ||||||||||||||| ||||||| ||||| || ||||||||||||||| | |||| Sbjct: 3011 aaggctcgtccacggagggttagtcaggacctaaaatgaggccgaaaggcgtaattgatg 3070 Query: 472 gacaacaggtcaatattcctgtacta 497 |||||||||| ||||||||||||||| Sbjct: 3071 gacaacaggttaatattcctgtacta 3096
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 307 bits (155), Expect = 2e-80 Identities = 197/211 (93%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1369 tgggggataagctccattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1428 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 1429 atgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggaggtttgcctagaa 1488 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| || Sbjct: 1489 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaaat 1548 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 ||||||| ||||||| ||||||||||||||| Sbjct: 1549 gaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 333 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 454 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 301 bits (152), Expect = 1e-78 Identities = 226/251 (90%), Gaps = 6/251 (2%) Strand = Plus / Plus Query: 48 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 107 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 984 atgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggccccta 1043 Query: 108 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 167 |||||||||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 1044 aatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgcctaga 1103 Query: 168 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 227 || ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| | Sbjct: 1104 agaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaata 1163 Query: 228 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 |||| ||| ||||||| | |||||||||||||||||| | |||||||||||||| Sbjct: 1164 tgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggtaggggagc 1217 Query: 288 gttccgcctta 298 |||| |||||| Sbjct: 1218 gttctgcctta 1228 Score = 206 bits (104), Expect = 5e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 330 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 389 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 390 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 449 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 450 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 501 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 299 bits (151), Expect = 5e-78 Identities = 170/175 (97%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 27 caaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccg 86 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 19152857 caaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacaacccg 19152915 Query: 87 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19152916 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 19152975 Query: 147 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 19152976 tagccaggaggtttgcctagaagcagccaccctttaaagagtgcgttatatctca 19153030 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 |||| |||||||||||||||||||| Sbjct: 19152860 cttggcccctgttatttttgggtca 19152836
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 299 bits (151), Expect = 5e-78 Identities = 170/175 (97%), Gaps = 1/175 (0%) Strand = Plus / Plus Query: 27 caaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccg 86 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 76252 caaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacaacccg 76310 Query: 87 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76311 gatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaaga 76370 Query: 147 cagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 201 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 76371 tagccaggaggtttgcctagaagcagccaccctttaaagagtgcgttatatctca 76425 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 |||| |||||||||||||||||||| Sbjct: 76255 cttggcccctgttatttttgggtca 76231
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 285 bits (144), Expect = 7e-74 Identities = 377/452 (83%), Gaps = 7/452 (1%) Strand = Plus / Plus Query: 50 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 109 ||||||||||||||||||||||||||| |||| || |||||| ||||||| |||||||| Sbjct: 981 gggggataagcttcatcgtcgagaggggaacattccagatcactagctaagccccctaaa 1040 Query: 110 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 169 |||||||| ||| ||||||||||| ||||||| ||||| |||||||||||||||||||| Sbjct: 1041 tgaccgctaagttataaaggaggt-agggtgcatagacatccaggaggtttgcctagaag 1099 Query: 170 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 229 ||||||||||||||| |||| |||||||| ||||| | || ||||| | ||| ||| Sbjct: 1100 aagccaccctttaaagcgtgcataatagctaactgacaaacagctcttgcaccgaaaatg 1159 Query: 230 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 289 |||| | |||| |||| | |||||||||||||||| |||||||||||||||||| Sbjct: 1160 aacgagaataagagatccgtcgaagctgtgggatgt-----agcatcggtaggggagcgt 1214 Query: 290 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 349 || ||||| ||||||||| | || ||| | || || ||||| |||| ||||||||| Sbjct: 1215 tcttccttatagggaagcacctgcacgagcagttgtggatgaagcagaagtgagaatgtc 1274 Query: 350 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 409 |||||||||||| ||||||||| ||||||||||| |||| |||||| |||| ||||| | Sbjct: 1275 ggcttgagtaacacaaacattggcgagaatccaattccccaaaaacctaagggttccttc 1334 Query: 410 gcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcga 469 |||||||| |||||| ||||||||||||| |||||||||| | |||||| || | || Sbjct: 1335 acaaggttcatccacgtagggtgagtcaggtcctaagatcatactgaaaggttta-ttga 1393 Query: 470 tggacaacaggtcaatattcctgtactacccc 501 |||| || |||| |||| |||||||||||||| Sbjct: 1394 tggataataggttaataatcctgtactacccc 1425
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 278 bits (140), Expect = 2e-71 Identities = 207/228 (90%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 966 ccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1024 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||||||||| |||| ||||||||||| | ||| | ||| |||||| Sbjct: 1025 ctaaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccagga 1084 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct: 1085 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttc 1144 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1145 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccgc 294 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 276 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 335 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctg 492 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagatcacca 1002 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| ||||| Sbjct: 1003 tctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagg 1062 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1063 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 1122 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 259 || |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1123 ctcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 262 bits (132), Expect = 1e-66 Identities = 232/263 (88%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 32 tcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 91 |||||||||||| || ||||||||||||||||| ||| ||||||||||||||| ||||| Sbjct: 948 tcggccagtgag-acagtgggggataagcttcattgtcaagagggaaacagcccagatca 1006 Query: 92 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 151 |||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| || Sbjct: 1007 ccagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacc 1066 Query: 152 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 211 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 1067 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagc 1126 Query: 212 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 271 || ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1127 gctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa-- 1184 Query: 272 gcatcggtaggggagcgttccgc 294 |||||||||||||||||||||| Sbjct: 1185 tcatcggtaggggagcgttccgc 1207 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtact 1409
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 258 bits (130), Expect = 2e-65 Identities = 203/226 (89%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 569 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 627 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 628 gctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagg 687 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 ||||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| Sbjct: 688 aggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgct 747 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 260 | ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 748 cctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 7e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 254 bits (128), Expect = 2e-64 Identities = 204/228 (89%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1103 ccagtgag-acggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccag 1161 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| |||||| Sbjct: 1162 ctaaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccagga 1221 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| | Sbjct: 1222 ggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttc 1281 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1282 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 333 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 454 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 254 bits (128), Expect = 2e-64 Identities = 201/224 (89%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 960 ccagtgag-acgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1018 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||||||||||||||| | ||| | ||| |||||| Sbjct: 1019 ctaaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccagga 1078 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| | Sbjct: 1079 ggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttc 1138 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 259 |||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1139 ttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 9e-61 Identities = 158/170 (92%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccgc 294 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 236 bits (119), Expect = 6e-59 Identities = 188/211 (89%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 984 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaaggcccctaa 1043 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||| ||| |||| |||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 1044 atgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtttgcctagaa 1103 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| || || Sbjct: 1104 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgcctaaaat 1163 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 ||||||| |||||| ||||||||||||||| Sbjct: 1164 gaacgggactaagcagtctgccgaagctgtg 1194
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 236 bits (119), Expect = 6e-59 Identities = 188/211 (89%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| ||||||||| |||||||||||| Sbjct: 2753 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagttaaggcccctaa 2812 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||| ||| |||| |||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 2813 atgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggaggtttgcctagaa 2872 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| || || Sbjct: 2873 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgcctaaaat 2932 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 ||||||| |||||| ||||||||||||||| Sbjct: 2933 gaacgggactaagcagtctgccgaagctgtg 2963
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 242 bits (122), Expect = 9e-61 Identities = 216/246 (87%), Gaps = 1/246 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||||||||||||||||||| || || | |||||||||||||| Sbjct: 967 tgggggataagctccattgtcgagagggaaacagcccagaccatcggctaaggcccctaa 1026 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 |||| || |||||||||||||||| | |||| ||||| ||||||||||||||||||| Sbjct: 1027 atgattactaagtgataaaggaggtgagagtgcccagacaaccaggaggtttgcctagaa 1086 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1087 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1146 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-catcggtaggggagc 287 ||||||| ||||| |||||||||||||||||||| ||| || |||||||||||||| Sbjct: 1147 gaacgggactaagtaatctgccgaagctgtgggataacaatttgttatcggtaggggagc 1206 Query: 288 gttccg 293 |||||| Sbjct: 1207 gttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 392 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 498 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 240 bits (121), Expect = 4e-60 Identities = 214/245 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 2662 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 2721 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | | || |||||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 2722 atcatcactaagtgataaaggaggtgggagtgcacagacaactaggaggtttgcctagaa 2781 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 2782 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcctgcgccgaaaat 2841 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 288 ||||||||||||| ||| | ||||||||||||||| |||| ||||||||||||||| Sbjct: 2842 gaacggggctaagtgatgtaccgaagctgtgggattaagaaattaatcggtaggggagcg 2901 Query: 289 ttccg 293 ||||| Sbjct: 2902 ttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 341 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 400 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 401 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 460 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 461 cgtagtcgatggaca 475 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 238 bits (120), Expect = 1e-59 Identities = 190/212 (89%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||||||||||||||||||||||| || |||||||||||| ||| || Sbjct: 580 tgggggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggtccccaa 639 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||| ||| |||||||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 640 atgactgctaagtgataaaggaggtgagagtgcactgacaaccaggaggtttgcctagaa 699 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| || ||||| ||| ||| ||| || Sbjct: 700 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctctt-cgccgaaaat 758 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 |||||||||||||| ||| |||||||||||| Sbjct: 759 gaacggggctaagcagtctaccgaagctgtgg 790 Score = 69.9 bits (35), Expect = 8e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 333 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 392 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 236 bits (119), Expect = 6e-59 Identities = 198/223 (88%), Gaps = 1/223 (0%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 170531 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagattaccag 170473 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||| Sbjct: 170472 ctaaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccagga 170413 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 170412 ggtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctc 170353 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 258 | |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170352 tcgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 236 bits (119), Expect = 6e-59 Identities = 198/223 (88%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 122395 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagattaccag 122453 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||| Sbjct: 122454 ctaaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccagga 122513 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 122514 ggtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctc 122573 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 258 | |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122574 tcgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 456 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 457 aaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 456 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 457 aaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 236 bits (119), Expect = 6e-59 Identities = 198/223 (88%), Gaps = 1/223 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| ||| ||||| Sbjct: 986 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagattaccag 1044 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||| |||||||||| |||||||||| | |||| ||||| |||||| Sbjct: 1045 ctaaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccagga 1104 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1105 ggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctc 1164 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 258 | |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1165 tcgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 456 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 457 aaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 6e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 216 bits (109), Expect = 5e-53 Identities = 187/213 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||||| | Sbjct: 1035 tgggggataagcttcattgtcgagagggaaacagcccagatcatcagctaaggcccctga 1094 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||||| |||| |||||||||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1095 atggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggaggtttgcttagaa 1154 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||||||||||||||||||||||| | |||| ||||||| ||| || Sbjct: 1155 gcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaaaat 1214 Query: 229 gaacggggctaagcgatctgccgaagctgtggg 261 ||||||| ||||||| |||||||||||||||| Sbjct: 1215 gaacgggactaagcggcctgccgaagctgtggg 1247
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 234 bits (118), Expect = 2e-58 Identities = 200/226 (88%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1090 ccagtgag-acggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 1148 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| | Sbjct: 1149 ctaaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaa 1208 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct: 1209 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttc 1268 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 261 |||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1269 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 566 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 624 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 625 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 684 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 744 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 745 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Minus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 5434418 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 5434360 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 5434359 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 5434300 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 5434299 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 5434240 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434239 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 3897020 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 3897078 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 3897079 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 3897138 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 3897139 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 3897198 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897199 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Minus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 2807139 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 2807081 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 2807080 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 2807021 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 2807020 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 2806961 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806960 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 1005863 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 1005921 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 1005922 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 1005981 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 1005982 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 1006041 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006042 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Minus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 5944458 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 5944400 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 5944399 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 5944340 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 5944339 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 5944280 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944279 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Minus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 4916814 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 4916756 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 4916755 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 4916696 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 4916695 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 4916636 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916635 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 2503482 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 2503540 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 2503541 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 2503600 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 2503601 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 2503660 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503661 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 232 bits (117), Expect = 9e-58 Identities = 202/229 (88%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 2378691 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 2378749 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 2378750 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 2378809 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 2378810 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 2378869 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378870 cttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 273 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 332 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 333 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 392 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 393 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgt 265 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 275 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 334 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 455 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 93.7 bits (47), Expect = 5e-16 Identities = 172/213 (80%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 50 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 109 |||||||||||| | | ||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1030 gggggataagctccgttgtcaagagggaaacagcccagatcaccagctaaggcccctaaa 1089 Query: 110 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 169 || | || |||| ||||| ||| | ||| | ||| |||||||||| || |||||| Sbjct: 1090 tggtcactaagtggataaggatgtgagaatgcttaaacaaccaggaggttcgcttagaag 1149 Query: 170 cagc---caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 226 |||| | |||| ||||||||||||||||||||||| | |||| ||||||| || Sbjct: 1150 cagctatcttccttgaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgaga 1209 Query: 227 atgaacggggctaagcgatctgccgaagctgtg 259 ||| |||| ||||| || |||||||||||||| Sbjct: 1210 atggccgggactaagtgacctgccgaagctgtg 1242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407 Score = 224 bits (113), Expect = 2e-55 Identities = 201/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 944 gccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcacta 1002 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||| Sbjct: 1003 gctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagg 1062 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 1063 aggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgtt 1122 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1123 cttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216 Score = 224 bits (113), Expect = 2e-55 Identities = 201/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 25753 gccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcacta 25811 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||||||| |||||| || | ||||| |||||||||| | |||| | ||| ||||| Sbjct: 25812 gctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagg 25871 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 25872 aggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgtt 25931 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25932 cttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 224 bits (113), Expect = 2e-55 Identities = 198/225 (88%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2482 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2540 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||| ||| |||||| || ||||| |||||||||||| ||||| |||| |||||| Sbjct: 2541 ctaaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccagga 2600 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 ggtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctc 2660 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 260 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 ctgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 224 bits (113), Expect = 2e-55 Identities = 201/229 (87%), Gaps = 1/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 566 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 624 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | ||| Sbjct: 625 gctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagg 684 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggt 744 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 745 cttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 222 bits (112), Expect = 9e-55 Identities = 216/249 (86%), Gaps = 5/249 (2%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| ||||| |||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcatcgctaagtgagaaaggaggtgagagtgcatagacaactaggaggtttgcctagaa 698 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||| || ||||| ||| ||| ||| || Sbjct: 699 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctctt-cgccgaaaat 757 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgt----caaaatgcatcggtagggg 284 ||||||||||||||||| | ||||||||||||||| | ||||| ||||||||||| Sbjct: 758 gaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaataaatcggtagggg 817 Query: 285 agcgttccg 293 ||||||||| Sbjct: 818 agcgttccg 826 Score = 73.8 bits (37), Expect = 5e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 220 bits (111), Expect = 3e-54 Identities = 184/207 (88%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 566 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 624 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| || ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 625 gctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagg 684 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 ||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgtt 744 Query: 215 cttgcgctgaagatgaacggggctaag 241 | ||||| ||| ||||||||||||||| Sbjct: 745 cctgcgccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 220 bits (111), Expect = 3e-54 Identities = 190/215 (88%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| |||||||||||||||| | ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcatcgctaagtgataaaggaggtgagagtgcacagacaactaggaggtttgcctagaa 698 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||| || ||||| | | ||| ||| || Sbjct: 699 gcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctcct-cgccgaaaat 757 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 ||||||||||||||||| | ||||||||||||||| Sbjct: 758 gaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccg 293 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 157 bits (79), Expect = 4e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1041 tgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaaggcccctaa 1100 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1101 gtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1160 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1161 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1220 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 | |||| ||||| || |||||||||||||| Sbjct: 1221 ggccgggactaagtgacctgccgaagctgtg 1251
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 3e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 157 bits (79), Expect = 4e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 1041 tgggggataagcttcatggtcaagagggaaacagcccagatcaccagctaaggcccctaa 1100 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1101 gtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1160 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1161 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1220 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 | |||| ||||| || |||||||||||||| Sbjct: 1221 ggccgggactaagtgacctgccgaagctgtg 1251
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 218 bits (110), Expect = 1e-53 Identities = 110/110 (100%) Strand = Plus / Plus Query: 409 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 469 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 518 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacggaggga 110
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 216 bits (109), Expect = 5e-53 Identities = 198/225 (88%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 624 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||| ||| |||||| || ||||| |||||||||||| ||||| |||| |||||| Sbjct: 625 ctaaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccagga 684 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 744 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 260 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 745 ct-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 216 bits (109), Expect = 5e-53 Identities = 201/229 (87%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 566 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 624 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | ||| Sbjct: 625 gctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagg 684 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 |||||||||||||||||||||||||| |||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgat 744 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 ||| ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 745 ctt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 2e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 454 cgaaaggcgtagtcgatggaca 475 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgt 265 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| || Sbjct: 2050893 tgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaaggcccccaa 2050834 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 | ||||||||||| |||||||||||||||| ||||| |||||||||| || ||||| Sbjct: 2050833 gccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggttggcttagaa 2050774 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||| ||||||||| |||| |||| || ||||||||||||| ||| || Sbjct: 2050773 gcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcgccgaaaat 2050714 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 | ||||||||||||||| ||||||| ||||| Sbjct: 2050713 ggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||| || Sbjct: 1450608 tgggggataagctccatcgtcgagagggaaacagcccagaccaccaactaaggcccccaa 1450667 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 | ||||||||||| |||||||||||||||| ||||| |||||||||| || ||||| Sbjct: 1450668 gccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggaggttggcttagaa 1450727 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||| ||||||||| |||| |||| || ||||||||||||| ||| || Sbjct: 1450728 gcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcgccgaaaat 1450787 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 | ||||||||||||||| ||||||| ||||| Sbjct: 1450788 ggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 456 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 457 aaggcgtagtcgatgga 473 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 7e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 456 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 457 aaggcgtagtcgatgga 473 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 214 bits (108), Expect = 2e-52 Identities = 199/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 137442 ccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcag 137500 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| | Sbjct: 137501 ctaaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaa 137560 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| | Sbjct: 137561 ggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttc 137620 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137621 ttgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 214 bits (108), Expect = 2e-52 Identities = 199/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 48102 ccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcag 48044 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| | Sbjct: 48043 ctaaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaa 47984 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| | Sbjct: 47983 ggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttc 47924 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 263 |||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47923 ttgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 3e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||| || Sbjct: 3327977 tgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggtccccaa 3328036 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | | || ||||| |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 3328037 atcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgcctagaa 3328096 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 3328097 gcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 3328156 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||||||||| ||| | |||||||||||| Sbjct: 3328157 gaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 214 bits (108), Expect = 2e-52 Identities = 186/212 (87%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||| || Sbjct: 2450751 tgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggtccccaa 2450692 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | | || ||||| |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 2450691 atcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgcctagaa 2450632 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| ||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 2450631 gcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 2450572 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||||||||| ||| | |||||||||||| Sbjct: 2450571 gaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 212 bits (107), Expect = 8e-52 Identities = 189/215 (87%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | ||| |||||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcattgctaagtgataaaggaggtgggagtgcagagacaactaggaggtttgcctagaa 698 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||| || ||||| | | ||| ||| || Sbjct: 699 gcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcct-cgccgaaaat 757 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 |||||||||||||| || | ||||||||||||||| Sbjct: 758 gaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 9e-18 Identities = 119/142 (83%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 454 cgaaaggcgtagtcgatggaca 475 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||| | Sbjct: 945 tgggggataagcttcattgtcaagagggaaacagcccagatcatcagctaaggccccaga 1004 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||||| |||| ||||||||||| | |||| | ||||||||||||||||| ||||| Sbjct: 1005 atggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggaggtttgcttagaa 1064 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||||||||||||||||||||||| | ||||| ||||||| ||| || Sbjct: 1065 gcagccaccctttaaagagtgcgtaatagctcactggtggagcgttcttgcgccgaaaat 1124 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 ||||| ||||||| ||||||||||| |||||| Sbjct: 1125 tcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccg 293 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 210 bits (106), Expect = 3e-51 Identities = 183/206 (88%), Gaps = 2/206 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 568 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 626 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| |||||| Sbjct: 627 ctaaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccagga 686 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 216 ttgcgctgaagatgaacggggctaag 241 | ||| ||| ||||||||||||||| Sbjct: 747 ct-cgccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 490 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 3e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 331 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 390 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 391 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 450 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 451 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 155 bits (78), Expect = 2e-34 Identities = 205/244 (84%), Gaps = 5/244 (2%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 2721 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 2780 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || || |||| |||||| ||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2781 atatttactaagtggcaaaggaagtgggaatgcatagacaaccaggaggtttgcttagaa 2840 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| |||||||||||||||||||||||||||||| || || | | ||||| ||| || Sbjct: 2841 gcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcctgcgccgaaaat 2900 Query: 229 gaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 287 ||| ||| || || ||| ||||||||||||||||||| || ||||||||||||||| Sbjct: 2901 gaatgggacttag-tatcttgccgaagctgtgggatgtttaa---catcggtaggggagc 2956 Query: 288 gttc 291 |||| Sbjct: 2957 gttc 2960
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2481 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2539 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||| ||| |||||| || ||||| |||||||||||| ||||| |||| |||||| Sbjct: 2540 ctaaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccagga 2599 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 |||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2600 ggtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2659 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 260 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2660 ctgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 151401 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 151342 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 151341 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 151282 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 151281 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 151222 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 | |||| ||||| || |||||||||||||| Sbjct: 151221 ggccgggactaagtgacctgccgaagctgtg 151191 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 42802 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 42861 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 42862 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 42921 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 42922 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 42981 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 | |||| ||||| || |||||||||||||| Sbjct: 42982 ggccgggactaagtgacctgccgaagctgtg 43012
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 208 bits (105), Expect = 1e-50 Identities = 115/117 (98%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagggaaacag 82 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 869 gggtcaaggtcggccagtgag-acgatgggggataagcttcatcgtcgagagggaaacag 927 Query: 83 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 139 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 928 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 4 cttgacccctgttatttttgggtca 28 ||||||||||||||||||||||||| Sbjct: 876 cttgacccctgttatttttgggtca 852
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 974 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1033 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1034 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1093 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1094 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1153 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 | |||| ||||| || |||||||||||||| Sbjct: 1154 ggccgggactaagtgacctgccgaagctgtg 1184
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 341 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 401 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 460 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 461 cgtagtcgatggacaacaggtcaatattcctgtacta 497 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 167 bits (84), Expect = 5e-38 Identities = 180/212 (84%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 990 tgggggataagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1049 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| | || |||| |||||| ||| | ||| | ||| ||||||||||||| ||||| Sbjct: 1050 atggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaa 1109 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1110 gcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1169 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 | |||| ||||| || ||||||||||||||| Sbjct: 1170 ggccgggactaagtgacctgccgaagctgtgg 1201
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 206 bits (104), Expect = 5e-50 Identities = 185/212 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||| || Sbjct: 2313259 tgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaaggcccccaa 2313318 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 | ||||||||| | |||||||||||||||| |||||| |||||||||| || ||||| Sbjct: 2313319 gacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggttggcttagaa 2313378 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||| ||||||||| |||| |||| || ||||||||||||| ||| || Sbjct: 2313379 gcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcgccgaaaat 2313438 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||| ||||||||| ||||||| ||||| Sbjct: 2313439 gaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 206 bits (104), Expect = 5e-50 Identities = 185/212 (87%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| |||||||||||||| |||||||| || ||||| |||||||||| || Sbjct: 1108588 tgggggataagctccatcgtcgagaggggaacagcccagaccaccaactaaggcccccaa 1108529 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 | ||||||||| | |||||||||||||||| |||||| |||||||||| || ||||| Sbjct: 1108528 gacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggaggttggcttagaa 1108469 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||||||| ||||||||| |||| |||| || ||||||||||||| ||| || Sbjct: 1108468 gcagccaccctttaaacagtgcgtaacagctgactggtcaagcgcccttgcgccgaaaat 1108409 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||| ||||||||| ||||||| ||||| Sbjct: 1108408 gaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 206 bits (104), Expect = 5e-50 Identities = 185/212 (87%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| || Sbjct: 2333858 tgggggataagcttcatcgtcgagagggaaacagcccagaccaccagctaaggtccccaa 2333799 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | | || |||| ||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 2333798 atcatcactaagtggcaaaggaggtggggatgctcagacaaccaggaggtttgcctagaa 2333739 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| ||||||||||||||||||||||| || |||| | ||||| ||| || Sbjct: 2333738 gcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttcctgcgccgaaaat 2333679 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||| ||||| ||| | |||||||||||| Sbjct: 2333678 gaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 204 bits (103), Expect = 2e-49 Identities = 183/207 (88%), Gaps = 2/207 (0%) Strand = Plus / Plus Query: 35 gccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94 ||||||||| ||| ||||||||||||||||||||| ||||||||||||||| || ||||| Sbjct: 566 gccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccacca 624 Query: 95 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 154 ||||||| ||| |||| || ||||||||||||||||||||| |||| ||||| ||||| Sbjct: 625 gctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagg 684 Query: 155 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 214 ||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| Sbjct: 685 aggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgtt 744 Query: 215 cttgcgctgaagatgaacggggctaag 241 | | ||| ||| ||||||||||||||| Sbjct: 745 cct-cgccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 204 bits (103), Expect = 2e-49 Identities = 184/211 (87%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcattgtcaagagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | |||| | |||||||||||||||| ||||| ||||| | ||||||||||||||||| Sbjct: 639 atcagcgctaattgataaaggaggtgggagtgcatagacaactaggaggtttgcctagaa 698 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| |||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 699 gcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctcctgcgccgaatat 758 Query: 229 gaacggggctaagcgatctgccgaagctgtg 259 |||||||||| ||| || | ||||| ||||| Sbjct: 759 gaacggggctgagccatgtaccgaaactgtg 789 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 454 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 109 bits (55), Expect = 9e-21 Identities = 154/187 (82%) Strand = Plus / Plus Query: 73 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 132 ||||||||||||| ||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 133 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 192 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 193 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 252 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 253 agctgtg 259 ||||||| Sbjct: 1526 agctgtg 1532
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 394 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 453 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 454 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 71 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 130 ||||||||||||||| ||||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 131 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 190 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 191 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 250 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 251 gaagctgtg 259 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atcggtaggggagcgttccg 293 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 69.9 bits (35), Expect = 8e-09 Identities = 112/137 (81%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 71 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 130 ||||||||||||||| ||||||||| ||||||||| ||||| | || |||| |||||| Sbjct: 1117 agagggaaacagcccagatcaccagataaggccccaaaatggtcactaagtggaaaagga 1176 Query: 131 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagc---caccctttaaagag 187 ||| | ||| | ||| |||||||||| || |||||||||| | |||| |||||| Sbjct: 1177 tgtgagaatgcttaaacaaccaggaggttcgcttagaagcagctatcttccttgaaagag 1236 Query: 188 tgcgtaatagctcactg 204 ||||||||||||||||| Sbjct: 1237 tgcgtaatagctcactg 1253
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 202 bits (102), Expect = 8e-49 Identities = 171/194 (88%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||||||||||||||||||| || |||||||||||| ||| || Sbjct: 578 tgggggataagctccatggtcgagagggaaacagcccagaccaccagctaaggtccccaa 637 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || |||||||||| ||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 638 attgtagctcagtgattaaggaggtgggattgcacagacaaccaggaggtttgcctagaa 697 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 |||||||||||| ||||||||||||||||||||||| || |||| | ||||| ||| || Sbjct: 698 gcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcctgcgccgaaaat 757 Query: 229 gaacggggctaagc 242 |||||||||||||| Sbjct: 758 gaacggggctaagc 771 Score = 157 bits (79), Expect = 4e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 493 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 8e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 455 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 131 bits (66), Expect = 2e-27 Identities = 132/154 (85%) Strand = Plus / Plus Query: 51 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 110 |||||||||||| || || ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1021 ggggataagcttgattttcaagagggaaacagcccagatcaccagctaaggccccaaaat 1080 Query: 111 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 170 | || |||| |||||| ||||| ||| | ||| ||||||||||||| ||||||| Sbjct: 1081 ggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggaggtttgcttagaagc 1140 Query: 171 agccaccctttaaagagtgcgtaatagctcactg 204 |||||||||| ||||||||||||||||||||||| Sbjct: 1141 agccacccttcaaagagtgcgtaatagctcactg 1174
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 200 bits (101), Expect = 3e-48 Identities = 183/209 (87%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 |||||||||| ||||||||||||||||||||||| || |||||||||||| ||| ||||| Sbjct: 582 gggataagctccatcgtcgagagggaaacagcccagaccaccagctaaggtcccaaaatg 641 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 ||| |||||||||||||||||| |||| ||||| |||||||||||||||||||||| Sbjct: 642 gatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgcctagaagca 701 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 |||| |||| ||||||||||||||||||||||| || |||| | | ||| ||| ||||| Sbjct: 702 gccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgccgaaaatgaa 760 Query: 232 cggggctaagcgatctgccgaagctgtgg 260 ||||||||||| ||| |||||||||||| Sbjct: 761 cggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 447 atcaggccgaaaggcgtagtcgatggaca 475 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || || ||| Sbjct: 957 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcag 1015 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1016 ctaaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1075 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1076 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttc 1135 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagct 256 |||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1136 ttgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 448 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 462 gtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 200 bits (101), Expect = 3e-48 Identities = 192/221 (86%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||| ||||||||||||||| || || ||| Sbjct: 2839 ccagtgag-acggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcag 2897 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||||||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 2898 ctaaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 2957 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 215 ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 2958 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttc 3017 Query: 216 ttgcgctgaagatgaacggggctaagcgatctgccgaagct 256 |||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3018 ttgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 277 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 336 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 337 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 396 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 397 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 448 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 462 gtagtcgatggacaacaggtcaatattcctgtact 496 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 114470 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 114411 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 114410 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 114351 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 114350 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 114291 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgt 265 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 114290 gaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 200 bits (101), Expect = 3e-48 Identities = 188/217 (86%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||| ||| ||| ||||||||||||||| || |||||| |||||||||||| Sbjct: 3047 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggcccctaa 3106 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || ||| |||| |||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 3107 atagtagctaagtggcaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 3166 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||||||||||||||||||||||||||| || ||||| | ||||| ||| || Sbjct: 3167 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcctgcgccgaaaat 3226 Query: 229 gaacggggctaagcgatctgccgaagctgtgggatgt 265 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 3227 gaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 394 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014 Score = 180 bits (91), Expect = 3e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 334 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 393 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 394 acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 452 ||| |||| |||| | || |||| ||||||||| ||||||||||||| |||||| ||| Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460 Query: 453 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 ||||||||||||||||||||| ||| |||||| ||||| |||| Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 catcggtaggggagcgttccg 293 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 catcggtaggggagcgttccg 293 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 198 bits (100), Expect = 1e-47 Identities = 185/212 (87%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||| || Sbjct: 579 tgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggtccccaa 638 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||| |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 639 atggatgctaagtgataaaggaggtgggattgcagagacaaccaggaggtttgcctagaa 698 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| ||||||||||||||||||||||| || |||| | | ||| ||| || Sbjct: 699 gcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatcct-cgccgaaaat 757 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 |||||||||||||| || |||||||||||| Sbjct: 758 gaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 495 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 198 bits (100), Expect = 1e-47 Identities = 185/212 (87%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 |||||||||| ||||||||||||||||||||||| || | |||||||||| ||| |||| Sbjct: 580 gggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggtccccaaata 639 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 | ||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 640 attgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgcctagaagca 699 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 || | |||| ||||||||||||||||||||||| || ||||| | | ||| ||| ||||| Sbjct: 700 gcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgccgaaaatgaa 758 Query: 232 cggggctaagcgatctgccgaagctgtgggat 263 ||||||||||| || | ||||||||| ||||| Sbjct: 759 cggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcct 491 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 198 bits (100), Expect = 1e-47 Identities = 185/212 (87%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 52 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 111 |||||||||| ||||||||||||||||||||||| || | |||||||||| ||| |||| Sbjct: 580 gggataagctccatcgtcgagagggaaacagcccagaccgccagctaaggtccccaaata 639 Query: 112 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 171 | ||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 640 attgctaagtgataaaggaggtgggagtgcatagacaaccaggaggtttgcctagaagca 699 Query: 172 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 231 || | |||| ||||||||||||||||||||||| || ||||| | | ||| ||| ||||| Sbjct: 700 gcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcct-cgccgaaaatgaa 758 Query: 232 cggggctaagcgatctgccgaagctgtgggat 263 ||||||||||| || | ||||||||| ||||| Sbjct: 759 cggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcct 491 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 198 bits (100), Expect = 1e-47 Identities = 185/212 (87%), Gaps = 1/212 (0%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||| || Sbjct: 580 tgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagctaaggtccccaa 639 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 || | | || ||||| |||||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 640 atcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggaggtttgcctagaa 699 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | |||| ||||||||||||||||||||||| || ||||| | | ||| ||| || Sbjct: 700 gcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcct-cgccgaaaat 758 Query: 229 gaacggggctaagcgatctgccgaagctgtgg 260 ||||||||||||| ||| | |||||||||||| Sbjct: 759 gaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 336 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 395 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 396 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 455 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 456 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 70 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 129 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 130 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 188 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 189 gcgtaatagctcactg 204 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 70 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 129 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 130 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 188 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 189 gcgtaatagctcactg 204 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 81.8 bits (41), Expect = 2e-12 Identities = 51/53 (96%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 23 gggtcaaggtcggccagtgagnacgatgggggataagcttcatcgtcgagagg 75 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 365137 gggtcaaggtcggccagtgag-acggtgggggataagcttcatcgtcgagagg 365188 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 145 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 gtcgagagggaaacagcccggatc 90 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 193227 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 193281 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 322 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 381 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 382 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 441 |||| |||||||||| |||| ||||| ||||||||||||| | ||||||||||||| | Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556 Query: 442 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||||| ||| ||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 143555 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 143501
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 5e-47 Identities = 138/151 (91%) Strand = Plus / Plus Query: 347 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 406 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 407 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 466 ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| || Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568 Query: 467 cgatggacaacaggtcaatattcctgtacta 497 ||||||| ||||||| ||||||||||||||| Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599 Score = 157 bits (79), Expect = 4e-35 Identities = 172/203 (84%) Strand = Plus / Plus Query: 57 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 116 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 117 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 176 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 177 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 236 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 237 ctaagcgatctgccgaagctgtg 259 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 5e-47 Identities = 153/171 (89%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| |||| ||| ||| |||||| ||| |||| ||||||| |||||| Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtcaggacctaag 1488 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 497 |||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1489 gccaggccgaaaggcgcagtcgatggcaaacaggtgaatattcctgtacta 1539 Score = 139 bits (70), Expect = 1e-29 Identities = 189/226 (83%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||||| ||||||||||| |||||| ||||||||||||||| || || ||| Sbjct: 1073 ccagtgag-acgatcggggataagctcgatcgtcaagagggaaacagcccagaccatcag 1131 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 |||||||||| ||||||| ||| |||| |||||| ||| ||| || ||| |||||| Sbjct: 1132 ctaaggccccaaaatgacagctaagtggcaaaggatgtgaaaatgcgaaaacaaccagga 1191 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgat-cgagcgcc 214 ||||||| ||||||||||| |||||||||||||||||||||||||||| | | |||| Sbjct: 1192 ggtttgctcagaagcagccatcctttaaagagtgcgtaatagctcactggtccaagcgtt 1251 Query: 215 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 260 ||||||| ||| || | |||| ||||| |||||||||||||||| Sbjct: 1252 cttgcgccgaaaattatcgggactaagttgtctgccgaagctgtgg 1297
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 194 bits (98), Expect = 2e-46 Identities = 146/162 (90%) Strand = Plus / Plus Query: 335 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 394 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1323 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccggaaa 1382 Query: 395 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 454 || |||| ||||||| ||||| ||||||| || |||||||||||| |||||| ||||| Sbjct: 1383 cctaagggttcctccacaaggctcgtccatggggggtgagtcaggacctaaggcgaggcc 1442 Query: 455 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 ||| |||||||||||||| ||||||| |||||||||||||| Sbjct: 1443 gaacggcgtagtcgatggcaaacaggttaatattcctgtact 1484 Score = 172 bits (87), Expect = 7e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 49 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108 ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 971 tgggggataagcttcatagtcaagagggaaacagcccagatcaccagctaaggcccctaa 1030 Query: 109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 168 ||||||||| |||| |||||| ||| | ||| | ||| |||||| ||| || ||||| Sbjct: 1031 atgaccgctaagtggaaaaggatgtgagaatgctgaaacaaccaggacgttcgcttagaa 1090 Query: 169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 228 ||||| | | |||||||||||||||||||||||||| | |||| ||||||| || || Sbjct: 1091 gcagctaacgtttaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataat 1150 Query: 229 gaacggggctaagcgatctgccgaagctgtgggat 263 | |||| ||||||| ||||||||||||||||||| Sbjct: 1151 ggccgggactaagcggtctgccgaagctgtgggat 1185
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 192 bits (97), Expect = 8e-46 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 36 ccagtgagnacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95 |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 965 ccagtgag-acggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcag 1023 Query: 96 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 155 ||||||||||||||| || ||| |||| |||||||||| ||| ||||| |||||| Sbjct: 1024 ctaaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccagga 1083 Query: 156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 204 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 ggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 327 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 386 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 387 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 446 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 447 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 496 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,034,817 Number of Sequences: 3902068 Number of extensions: 3034817 Number of successful extensions: 54931 Number of sequences better than 10.0: 2455 Number of HSP's better than 10.0 without gapping: 2485 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 41509 Number of HSP's gapped (non-prelim): 12597 length of query: 518 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 495 effective length of database: 17,143,297,704 effective search space: 8485932363480 effective search space used: 8485932363480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)