ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal1i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YR01_CAEEL (Q10014) Hypothetical protein T25E4.1 precursor 30 1.4
2DEOC_ANAVT (Q3MF82) Deoxyribose-phosphate aldolase (EC 4.1.2.4) ... 28 9.2

>YR01_CAEEL (Q10014) Hypothetical protein T25E4.1 precursor|
          Length = 231

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 127 P*AVTIALLRLAFATAPVGSVPLTKPLPMSXP 32
           P A   AL+R AFA  PV + P   P+P++ P
Sbjct: 55  PVAAAPALVRPAFAPVPVAAAPAFAPVPVAAP 86



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>DEOC_ANAVT (Q3MF82) Deoxyribose-phosphate aldolase (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
          Length = 226

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -2

Query: 131 GSISSDNRPIK--TRFRYG---SGGFRSLNQATAYEXAGSXSTGT 12
           G+  +D R +K  TR R G   SGG R+LNQA     AG+   GT
Sbjct: 165 GATVADVRLLKEITRERVGIKASGGIRTLNQALDLILAGATRLGT 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,842,221
Number of Sequences: 219361
Number of extensions: 161582
Number of successful extensions: 496
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 80,573,946
effective HSP length: 19
effective length of database: 76,406,087
effective search space used: 1833746088
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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