>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
 Frame = -2

Query: 524 PSKARKQQPP*----GKLCIE*VPGGKPHVSSAVLPAALQHPSLDQDS*CTRALPRRTEL 357
           P +   QQPP      K  +   PG  P VSSA  P A+  P  +  +      P  T  
Sbjct: 88  PHQPPHQQPPPPPQESKPVVPQGPGSAPGVSSAP-PPAVSAPPANPPTTGAPPGPGPTP- 145

Query: 356 TPVPSVSTQSKGP-----PSSPASTTHDQLG 279
           TP P+V + + GP     PSS  STT  Q G
Sbjct: 146 TPPPAVPSTAPGPPPPSTPSSGVSTTPPQTG 176

>CASK_MOUSE (P06796) Kappa-casein precursor|
          Length = 181

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -3

Query: 340 YPLKVRVLQVLRQAQPMINWEQLCLATKPAGASIQLPHQDITTMPVSVENPD 185
           YPL VR+L +LR   P+  W+ +    + AG    +P+     MP + EN D
Sbjct: 79  YPLVVRLL-LLRSPAPISKWQSMPNFPQSAGVPYAIPNPSFLAMPTN-ENQD 128

>ADO_MOUSE (O54754) Aldehyde oxidase (EC 1.2.3.1) (Retinal oxidase)|
          Length = 1333

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
 Frame = +2

Query: 149  PVAAVHRIGILDIRIFNTDRHGGNVLVRKLDGGTGRFGCQTELFPIDHGLCLPENLEDPY 328
            P+++VH  G     + NT+  GG+V V  L+G   +  CQT L  ++     P   ++P 
Sbjct: 1061 PMSSVHLRGTSTETVPNTNASGGSV-VADLNGLAVKDACQTLLKRLE-----PIISKNPQ 1114

Query: 329  FEWIHWAQASI--PFSEEELEYIRNLDPMRDAAMLRG---ELPMIREACLRVLILC 481
              W  WAQ +     S   + Y R  +   D     G   E  +   AC  V I C
Sbjct: 1115 GTWKDWAQTAFDQSISLSAVGYFRGYESNIDWEKGEGHPFEYFVFGAACSEVEINC 1170

>ADO_RAT (Q9Z0U5) Aldehyde oxidase (EC 1.2.3.1)|
          Length = 1333

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/70 (31%), Positives = 35/70 (50%)
 Frame = +2

Query: 149  PVAAVHRIGILDIRIFNTDRHGGNVLVRKLDGGTGRFGCQTELFPIDHGLCLPENLEDPY 328
            P+++VH  G     + NT+  GG+V V  L+G   +  CQT L  ++     P   ++P 
Sbjct: 1061 PMSSVHLRGTSTETVPNTNASGGSV-VADLNGLAVKDACQTLLKRLE-----PIISKNPQ 1114

Query: 329  FEWIHWAQAS 358
              W  WAQ +
Sbjct: 1115 GTWKDWAQTA 1124

>ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 1) (Endo-1,3-beta-glucanase 1)
           (Laminarinase-1) (Daughter specific expression protein
           4)
          Length = 1117

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -2

Query: 368 RTELTPVPSVSTQSKGPPSSPASTTHDQLGTALSGNQTCRCLHPASSPGH 219
           RT++T  PSVS  S   P  P++ T +    + S + T   ++P+SS G+
Sbjct: 281 RTQITLSPSVSLYSTTSPIYPSNITENGSSPSPSLSSTVSPVYPSSSTGN 330

>ADO_BOVIN (P48034) Aldehyde oxidase (EC 1.2.3.1)|
          Length = 1339

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 23/70 (32%), Positives = 35/70 (50%)
 Frame = +2

Query: 149  PVAAVHRIGILDIRIFNTDRHGGNVLVRKLDGGTGRFGCQTELFPIDHGLCLPENLEDPY 328
            P++++H  G     I NT+  GG+V V  L+G   +  CQT L  +      P   ++P 
Sbjct: 1067 PLSSIHLRGTSTETIPNTNPSGGSV-VADLNGLAVKDACQTLLKRLK-----PIISKNPK 1120

Query: 329  FEWIHWAQAS 358
              W  WAQA+
Sbjct: 1121 GTWKDWAQAA 1130

>KPB2_RABIT (P46018) Phosphorylase b kinase alpha regulatory chain, liver isoform|
            (Phosphorylase kinase alpha L subunit)
          Length = 1235

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +2

Query: 131  HGTSSFPVAAVHRIGILDIRIFNTDRHGGNVLVRKLDGGTGRFGCQTELFPI 286
            H ++S P  ++H +G   +    T+R G N L  ++   T RF    + FP+
Sbjct: 975  HSSASSPAISIHEVGHTGVT--KTERSGINRLRSEMKQMTRRFSADEQFFPV 1024

>YP150_YEAST (Q12152) Putative serine/threonine-protein kinase YPL150W (EC|
           2.7.11.1)
          Length = 901

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -1

Query: 540 ISPISAKQSPKAAASLRKIVHRISTRRQASRIIGSSPRSIAASL--IGSRFLMYSSSSSE 367
           ++P+S K+S  +A  L   + +IS++R  S  I  SPR     L  + S F    SS+S 
Sbjct: 421 MTPVSRKKSKDSAKVLNPTLSKISSQRAYSHSIAGSPRKSNNFLQKVSSFFKSKKSSNSN 480

Query: 366 N 364
           +
Sbjct: 481 S 481

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 23/77 (29%), Positives = 28/77 (36%), Gaps = 19/77 (24%)
 Frame = -2

Query: 386  TRALPRRTELTPVPSVS----------------TQSKGPPSSPASTTHDQL---GTALSG 264
            T   P  T +TP+PS S                T S   PSS   T H       TA + 
Sbjct: 2500 TATTPTATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTT 2559

Query: 263  NQTCRCLHPASSPGHYH 213
              T     P+S+PG  H
Sbjct: 2560 GATGSVATPSSTPGTAH 2576

>APTE_DROME (P29673) Protein apterous|
          Length = 469

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
 Frame = -2

Query: 362 ELTPVPSVSTQSKGPPSSPASTTHDQLGTALS-----GNQTCRCLHPASSPGHYHHACQC 198
           E T   S  T+  GPPSSP ST+  ++   L      G Q     + ++    +H +   
Sbjct: 115 ETTSGISFKTEPFGPPSSPESTSDSKITRNLDDCSGCGRQIQDRFYLSAVEKRWHAS--- 171

Query: 197 *KS*CLICRSCEQQQPGSSKC 135
               CL C +C Q     S C
Sbjct: 172 ----CLQCYACRQPLERESSC 188

>EP400_MOUSE (Q8CHI8) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
           SWI2/SNF2-related protein) (Domino homolog) (mDomino)
          Length = 3072

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
 Frame = -2

Query: 536 HLSLPSKARKQQPP*GKLCIE*VPGGKPHVSSAVLPAALQHPSLDQDS*CTRALPRRTEL 357
           H+ +P KA+ Q                  +SS     A   P LD    C R+LP  +  
Sbjct: 658 HVPMPGKAQMQTS---------------QLSSQTQTVASTRPPLDSAQPCQRSLPTSSSS 702

Query: 356 TPVPSVSTQSKGPP---SSPASTTHDQLGTALS 267
           + +  VS    GP    SSP +        ALS
Sbjct: 703 SSLVPVSGSGPGPSPARSSPVNRPSSATNKALS 735

>HWP1_CANAL (P46593) Hyphal wall protein 1 (Cell elongation protein 2)|
          Length = 634

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = -2

Query: 380 ALPRRTELTPVPSVSTQSKGPPSSPASTTHDQLGTALSGNQTCRCLHPASSP 225
           ++P  T  T VP+ S++S  P +SP S+     G+++    +     PA++P
Sbjct: 234 SVPATTPNTSVPTTSSESTTPATSPESSVPVTSGSSILATTSESSSAPATTP 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,015,587
Number of Sequences: 219361
Number of extensions: 1967008
Number of successful extensions: 6155
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6145
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)