No.
Definition
Score (bits)
E Value
1 ref|NM_197514.1| Oryza sativa (japonica cultivar-group) hypothet...
200
4e-48
2 dbj|AK069934.1| Oryza sativa (japonica cultivar-group) cDNA clon...
200
4e-48
3 dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA clon...
153
8e-34
4 gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 geno...
147
5e-32
5 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
147
5e-32
6 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
147
5e-32
7 dbj|AK099929.1| Oryza sativa (japonica cultivar-group) cDNA clon...
141
3e-30
8 ref|NM_187580.1| Oryza sativa (japonica cultivar-group), predic...
137
5e-29
9 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
129
1e-26
10 gb|AC104427.2| Oryza sativa (japonica cultivar-group) chromosome...
129
1e-26
11 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
12 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
125
2e-25
13 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
125
2e-25
14 emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112...
125
2e-25
15 gb|AY105811.1| Zea mays PCO068837 mRNA sequence
64
6e-07
16 gb|AY033471.1| Zea mays subsp. parviglumis isolate phi96100-PAR-...
56
1e-04
17 gb|AY033470.1| Zea mays subsp. mays isolate phi96100-Mo17 micros...
56
1e-04
18 gb|AY033468.1| Zea mays subsp. mays isolate phi96100-CML254 micr...
56
1e-04
19 gb|AY033467.1| Zea mays subsp. mays isolate phi96100-B73 microsa...
56
1e-04
20 gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
48
0.033
21 gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
46
0.13
22 emb|AJ577719.1|HVU577719 Hordeum vulgare subsp. vulgare TAM mark...
46
0.13
23 gb|DQ100375.1| Struthio camelus preproopiomelanocortin mRNA, com...
44
0.51
24 emb|X51500.1|ABNIFH Azospirillum brasilense NifH gene
44
0.51
25 emb|X51609.1|ABNIFHGE A.brasilense DNA for nifH, the gene encodi...
44
0.51
26 gb|M64344.1|AZSFEFEMO A.brasilense Fe protein and FeMo protein s...
44
0.51
27 ref|XM_470243.1| Oryza sativa (japonica cultivar-group), predic...
42
2.0
28 gb|AY487937.1| Myxococcus xanthus hypothetical protein gene, par...
42
2.0
29 gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
42
2.0
30 gb|DQ459547.1| Belgica antarctica heat shock protein 90 (hsp90) ...
42
2.0
31 ref|XM_504032.1| Yarrowia lipolytica CLIB122, YALI0E16665g predi...
42
2.0
32 emb|AL161939.10| Human DNA sequence from clone RP11-276A18 on ch...
42
2.0
33 emb|BX842576.1| Mycobacterium tuberculosis H37Rv complete genome...
42
2.0
34 emb|BX248338.1| Mycobacterium bovis subsp. bovis AF2122/97 compl...
42
2.0
35 gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome...
42
2.0
36 gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome...
42
2.0
37 dbj|AK105367.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.0
38 emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ...
42
2.0
39 gb|DQ213273.1| Taeniopygia guttata clone 0061P0015F05 HSPC023 pr...
40
8.0
40 gb|AY320035.2| Bacteriophage VWB, complete genome
40
8.0
41 gb|AF148071.2| Mus musculus cocaine and amphetamine regulated tr...
40
8.0
42 ref|XM_368185.1| Magnaporthe grisea 70-15 chromosome VI hypothet...
40
8.0
43 ref|XM_955705.1| Neurospora crassa OR74A hypothetical protein (N...
40
8.0
44 ref|XM_331322.1| Neurospora crassa OR74A hypothetical protein (N...
40
8.0
45 gb|AC073162.9| Homo sapiens chromosome 10 clone RP11-536J24, com...
40
8.0
46 ref|XM_745322.1| Aspergillus fumigatus Af293 hypothetical protei...
40
8.0
47 gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosom...
40
8.0
48 emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete ch...
40
8.0
49 emb|CR679839.2|CNS0FNIJ Tetraodon nigroviridis full-length cDNA
40
8.0
50 emb|CR679104.2|CNS0FMY4 Tetraodon nigroviridis full-length cDNA
40
8.0
51 emb|CR677554.2|CNS0FLRH Tetraodon nigroviridis full-length cDNA
40
8.0
52 emb|CR678211.2|CNS0FM9J Tetraodon nigroviridis full-length cDNA
40
8.0
53 emb|CR676112.2|CNS0FKNQ Tetraodon nigroviridis full-length cDNA
40
8.0
54 emb|CR670567.2|CNS0FGDP Tetraodon nigroviridis full-length cDNA
40
8.0
55 emb|CR660669.2|CNS0F8QR Tetraodon nigroviridis full-length cDNA
40
8.0
56 emb|CR660406.2|CNS0F8JG Tetraodon nigroviridis full-length cDNA
40
8.0
57 emb|CR658583.1|CNS0F74T Tetraodon nigroviridis full-length cDNA
40
8.0
58 emb|CR648814.2|CNS0EZLG Tetraodon nigroviridis full-length cDNA
40
8.0
59 emb|CR643055.2|CNS0EV5H Tetraodon nigroviridis full-length cDNA
40
8.0
60 ref|XM_501694.1| Yarrowia lipolytica CLIB122, YALI0C10802g predi...
40
8.0
61 emb|AL358876.11| Human DNA sequence from clone RP11-431K24 on ch...
40
8.0
62 gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ...
40
8.0
63 emb|BX011884.1|CNS08HC0 Single read from an extremity of a full-...
40
8.0
64 emb|BX011883.1|CNS08HBZ Single read from an extremity of a full-...
40
8.0
65 gb|CP000088.1| Thermobifida fusca YX, complete genome
40
8.0
66 emb|BX294024.1|NC20H10 Neurospora crassa DNA linkage group V Cos...
40
8.0
67 emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chr...
40
8.0
68 gb|AF519794.1| Rattus norvegicus cocaine-amphetamine regulated t...
40
8.0
69 gb|AC079955.9| Homo sapiens chromosome 10 clone RP11-134O16, com...
40
8.0
70 dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
40
8.0
71 gb|AY052546.1| Glomerella graminicola chitin synthase B (CHSB) g...
40
8.0
72 gb|AC020552.4|AC020552 Homo sapiens BAC clone RP11-431K24 from 1...
40
8.0
73 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.0
74 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.0
75 gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Ca...
40
8.0
76 gb|AY135690.1| Mus musculus argonaute 4 protein (Ago4) gene, com...
40
8.0
77 dbj|AP004877.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.0
78 dbj|AP004781.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.0
79 dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.0
80 dbj|AK119909.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.0
81 emb|CT025569.14| Mouse DNA sequence from clone RP24-68J22 on chr...
40
8.0
82 gb|AF082667.1|AF082667 Gallus gallus class II cytokine receptor ...
40
8.0
83 gb|AC131692.5| Mus musculus BAC clone RP23-391B20 from 19, compl...
40
8.0
84 emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1...
40
8.0
85 emb|AL606935.8| Mouse DNA sequence from clone RP23-204N19 on chr...
40
8.0
>ref|NM_197514.1 | Oryza sativa (japonica cultivar-group) hypothetical protein
(OSJNBa0053C23.18), mRNA
Length = 540
Score = 200 bits (101), Expect = 4e-48
Identities = 164/185 (88%)
Strand = Plus / Plus
Query: 117 aagcagaaggccatgaaggccgtgtcggcgctcgtcggcatagactcgctgtcggtggac 176
||||||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||
Sbjct: 49 aagcagaaggccatgaaggccgtctcggcgctcatcggcatcgacgagctgtccatggac 108
Query: 177 atggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtgagcaag 236
||||| | || ||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 109 atggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtggtgagcaag 168
Query: 237 ctgcgcaaggcgtggtcggcgtccatcgactcagtcggcccggccaaggagcccgagaag 296
||||||||| ||||| ||||| ||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 169 ctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggagccggagaag 228
Query: 297 aagga 301
|||||
Sbjct: 229 aagga 233
Score = 99.6 bits (50), Expect = 1e-17
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 498 cactacgtcgtgcagagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 487 cactacgtcgtgcagagcatggaggaaaaccccaactcctgcgccatctgctga 540
Score = 77.8 bits (39), Expect = 4e-11
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 332 caagaaggaaggcgagggggagaagaaggacggcgacggcaaggacgg---ggccaagaa 388
||||||||| ||||| | || ||||||||||||||| |||||||| |||||||||
Sbjct: 309 caagaaggacggcgatgcggccaagaaggacggcgac---aaggacggcgaggccaagaa 365
Query: 389 ggaggacggcgaggcgaagccgccacagccgacggagcagcagctc---gccgagctcat 445
|||||||||||| ||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 366 ggaggacggcgacaagaagccggcggcgccgacggagcagcagctcttcgccgagctcat 425
Query: 446 gaaccagta 454
|||||||||
Sbjct: 426 gaaccagta 434
Score = 50.1 bits (25), Expect = 0.008
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 320 cggcgccgacgccaagaaggaaggcgag---ggggagaagaaggacggcga 367
||||| ||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 273 cggcggcgacggcaagaaggaaggcgaggccggggacaagaaggacggcga 323
Score = 46.1 bits (23), Expect = 0.13
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 68 atgtcgaagaaaattgtggtgaagctg 94
|||||||||||||| ||||||||||||
Sbjct: 1 atgtcgaagaaaatcgtggtgaagctg 27
>dbj|AK069934.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023035E16, full
insert sequence
Length = 935
Score = 200 bits (101), Expect = 4e-48
Identities = 164/185 (88%)
Strand = Plus / Plus
Query: 117 aagcagaaggccatgaaggccgtgtcggcgctcgtcggcatagactcgctgtcggtggac 176
||||||||||||||||||||||| ||||||||| ||||||| ||| |||||| |||||
Sbjct: 193 aagcagaaggccatgaaggccgtctcggcgctcatcggcatcgacgagctgtccatggac 252
Query: 177 atggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtgagcaag 236
||||| | || ||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 253 atggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtggtgagcaag 312
Query: 237 ctgcgcaaggcgtggtcggcgtccatcgactcagtcggcccggccaaggagcccgagaag 296
||||||||| ||||| ||||| ||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 313 ctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggagccggagaag 372
Query: 297 aagga 301
|||||
Sbjct: 373 aagga 377
Score = 99.6 bits (50), Expect = 1e-17
Identities = 53/54 (98%)
Strand = Plus / Plus
Query: 498 cactacgtcgtgcagagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 631 cactacgtcgtgcagagcatggaggaaaaccccaactcctgcgccatctgctga 684
Score = 77.8 bits (39), Expect = 4e-11
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Plus
Query: 332 caagaaggaaggcgagggggagaagaaggacggcgacggcaaggacgg---ggccaagaa 388
||||||||| ||||| | || ||||||||||||||| |||||||| |||||||||
Sbjct: 453 caagaaggacggcgatgcggccaagaaggacggcgac---aaggacggcgaggccaagaa 509
Query: 389 ggaggacggcgaggcgaagccgccacagccgacggagcagcagctc---gccgagctcat 445
|||||||||||| ||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 510 ggaggacggcgacaagaagccggcggcgccgacggagcagcagctcttcgccgagctcat 569
Query: 446 gaaccagta 454
|||||||||
Sbjct: 570 gaaccagta 578
Score = 50.1 bits (25), Expect = 0.008
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Plus
Query: 320 cggcgccgacgccaagaaggaaggcgag---ggggagaagaaggacggcga 367
||||| ||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 417 cggcggcgacggcaagaaggaaggcgaggccggggacaagaaggacggcga 467
Score = 50.1 bits (25), Expect = 0.008
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 66 acatgtcgaagaaaattgtggtgaagctg 94
|||||||||||||||| ||||||||||||
Sbjct: 143 acatgtcgaagaaaatcgtggtgaagctg 171
>gb|AC092389.4 | Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete
sequence
Length = 194361
Score = 147 bits (74), Expect = 5e-32
Identities = 116/130 (89%)
Strand = Plus / Minus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 61442 tggacatggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtggtga 61383
Query: 232 gcaagctgcgcaaggcgtggtcggcgtccatcgactcagtcggcccggccaaggagcccg 291
|||||||||||||| ||||| ||||| ||||||| || ||||| ||||| |||||||| |
Sbjct: 61382 gcaagctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggagccgg 61323
Query: 292 agaagaagga 301
||||||||||
Sbjct: 61322 agaagaagga 61313
Score = 99.6 bits (50), Expect = 1e-17
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 498 cactacgtcgtgcagagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61059 cactacgtcgtgcagagcatggaggaaaaccccaactcctgcgccatctgctga 61006
Score = 77.8 bits (39), Expect = 4e-11
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 332 caagaaggaaggcgagggggagaagaaggacggcgacggcaaggacgg---ggccaagaa 388
||||||||| ||||| | || ||||||||||||||| |||||||| |||||||||
Sbjct: 61237 caagaaggacggcgatgcggccaagaaggacggcgac---aaggacggcgaggccaagaa 61181
Query: 389 ggaggacggcgaggcgaagccgccacagccgacggagcagcagctc---gccgagctcat 445
|||||||||||| ||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 61180 ggaggacggcgacaagaagccggcggcgccgacggagcagcagctcttcgccgagctcat 61121
Query: 446 gaaccagta 454
|||||||||
Sbjct: 61120 gaaccagta 61112
Score = 60.0 bits (30), Expect = 9e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 117 aagcagaaggccatgaaggccgtgtcggcgctcgtcgg 154
||||||||||||||||||||||| ||||||||| ||||
Sbjct: 61631 aagcagaaggccatgaaggccgtctcggcgctcatcgg 61594
Score = 50.1 bits (25), Expect = 0.008
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 320 cggcgccgacgccaagaaggaaggcgag---ggggagaagaaggacggcga 367
||||| ||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 61273 cggcggcgacggcaagaaggaaggcgaggccggggacaagaaggacggcga 61223
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 147 bits (74), Expect = 5e-32
Identities = 116/130 (89%)
Strand = Plus / Minus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 20183707 tggacatggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtggtga 20183648
Query: 232 gcaagctgcgcaaggcgtggtcggcgtccatcgactcagtcggcccggccaaggagcccg 291
|||||||||||||| ||||| ||||| ||||||| || ||||| ||||| |||||||| |
Sbjct: 20183647 gcaagctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggagccgg 20183588
Query: 292 agaagaagga 301
||||||||||
Sbjct: 20183587 agaagaagga 20183578
Score = 99.6 bits (50), Expect = 1e-17
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 498 cactacgtcgtgcagagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20183324 cactacgtcgtgcagagcatggaggaaaaccccaactcctgcgccatctgctga 20183271
Score = 77.8 bits (39), Expect = 4e-11
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 332 caagaaggaaggcgagggggagaagaaggacggcgacggcaaggacgg---ggccaagaa 388
||||||||| ||||| | || ||||||||||||||| |||||||| |||||||||
Sbjct: 20183502 caagaaggacggcgatgcggccaagaaggacggcgac---aaggacggcgaggccaagaa 20183446
Query: 389 ggaggacggcgaggcgaagccgccacagccgacggagcagcagctc---gccgagctcat 445
|||||||||||| ||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 20183445 ggaggacggcgacaagaagccggcggcgccgacggagcagcagctcttcgccgagctcat 20183386
Query: 446 gaaccagta 454
|||||||||
Sbjct: 20183385 gaaccagta 20183377
Score = 60.0 bits (30), Expect = 9e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 117 aagcagaaggccatgaaggccgtgtcggcgctcgtcgg 154
||||||||||||||||||||||| ||||||||| ||||
Sbjct: 20183896 aagcagaaggccatgaaggccgtctcggcgctcatcgg 20183859
Score = 50.1 bits (25), Expect = 0.008
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 320 cggcgccgacgccaagaaggaaggcgag---ggggagaagaaggacggcga 367
||||| ||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 20183538 cggcggcgacggcaagaaggaaggcgaggccggggacaagaaggacggcga 20183488
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 147 bits (74), Expect = 5e-32
Identities = 116/130 (89%)
Strand = Plus / Minus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 20194983 tggacatggcgagccagaagatgacggtgatcgggatggtggacccggtgaacgtggtga 20194924
Query: 232 gcaagctgcgcaaggcgtggtcggcgtccatcgactcagtcggcccggccaaggagcccg 291
|||||||||||||| ||||| ||||| ||||||| || ||||| ||||| |||||||| |
Sbjct: 20194923 gcaagctgcgcaagtcgtgggcggcgaccatcgagtccgtcgggccggcgaaggagccgg 20194864
Query: 292 agaagaagga 301
||||||||||
Sbjct: 20194863 agaagaagga 20194854
Score = 99.6 bits (50), Expect = 1e-17
Identities = 53/54 (98%)
Strand = Plus / Minus
Query: 498 cactacgtcgtgcagagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20194600 cactacgtcgtgcagagcatggaggaaaaccccaactcctgcgccatctgctga 20194547
Score = 77.8 bits (39), Expect = 4e-11
Identities = 108/129 (83%), Gaps = 9/129 (6%)
Strand = Plus / Minus
Query: 332 caagaaggaaggcgagggggagaagaaggacggcgacggcaaggacgg---ggccaagaa 388
||||||||| ||||| | || ||||||||||||||| |||||||| |||||||||
Sbjct: 20194778 caagaaggacggcgatgcggccaagaaggacggcgac---aaggacggcgaggccaagaa 20194722
Query: 389 ggaggacggcgaggcgaagccgccacagccgacggagcagcagctc---gccgagctcat 445
|||||||||||| ||||||| | ||||||||||||||||||| |||||||||||
Sbjct: 20194721 ggaggacggcgacaagaagccggcggcgccgacggagcagcagctcttcgccgagctcat 20194662
Query: 446 gaaccagta 454
|||||||||
Sbjct: 20194661 gaaccagta 20194653
Score = 60.0 bits (30), Expect = 9e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 117 aagcagaaggccatgaaggccgtgtcggcgctcgtcgg 154
||||||||||||||||||||||| ||||||||| ||||
Sbjct: 20195172 aagcagaaggccatgaaggccgtctcggcgctcatcgg 20195135
Score = 50.1 bits (25), Expect = 0.008
Identities = 45/51 (88%), Gaps = 3/51 (5%)
Strand = Plus / Minus
Query: 320 cggcgccgacgccaagaaggaaggcgag---ggggagaagaaggacggcga 367
||||| ||||| |||||||||||||||| ||||| ||||||||||||||
Sbjct: 20194814 cggcggcgacggcaagaaggaaggcgaggccggggacaagaaggacggcga 20194764
>dbj|AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 129 bits (65), Expect = 1e-26
Identities = 115/131 (87%), Gaps = 3/131 (2%)
Strand = Plus / Plus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | |||||||||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 1491591 tggacatggcgtcgcgcaagatgacggtgatcggcacggttgacccggtgaacgtggtga 1491650
Query: 232 gcaagctgcgcaaggcg---tggtcggcgtccatcgactcagtcggcccggccaaggagc 288
||||||||||||||||| ||| |||| | |||||| || ||||||||||||||||||
Sbjct: 1491651 gcaagctgcgcaaggcgtcctggccggcctacatcgagtccctcggcccggccaaggagc 1491710
Query: 289 ccgagaagaag 299
| |||||||||
Sbjct: 1491711 cggagaagaag 1491721
Score = 48.1 bits (24), Expect = 0.033
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 512 gagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||| | || ||||| ||||||
Sbjct: 1492036 gagcatggaggagaaccccaacccgtgtgccatttgctga 1492075
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 522 gagaaccccaactcctgcgcc 542
|||||||||||||||||||||
Sbjct: 3028882 gagaaccccaactcctgcgcc 3028862
>dbj|AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 125 bits (63), Expect = 2e-25
Identities = 116/133 (87%), Gaps = 3/133 (2%)
Strand = Plus / Plus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 13222327 tggacatggcgtcgcggaagatgacggtgatcggcacggtggatccggtggacgtggtga 13222386
Query: 232 gcaagctgcgcaagg---cgtggtcggcgtccatcgactcagtcggcccggccaaggagc 288
||||||| ||||||| ||||| |||| | |||||| || ||||| |||||||||||||
Sbjct: 13222387 gcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtcggaccggccaaggagc 13222446
Query: 289 ccgagaagaagga 301
| |||||||||||
Sbjct: 13222447 cggagaagaagga 13222459
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 512 gagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||| |||||||| ||||||
Sbjct: 13222904 gagcatggaggagaaccccaactcgtgcgccatttgctga 13222943
Score = 50.1 bits (25), Expect = 0.008
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 75 agaaaattgtggtgaagctggagctgaacagcggcaaggnataagcagaaggccatgaag 134
|||||||||||||||||||||| ||| | | ||||| | ||||||||||||||||||
Sbjct: 13222105 agaaaattgtggtgaagctggacctgcatgacaacaagg-acaagcagaaggccatgaag 13222163
Query: 135 gccgt 139
|||||
Sbjct: 13222164 gccgt 13222168
>gb|DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 125 bits (63), Expect = 2e-25
Identities = 116/133 (87%), Gaps = 3/133 (2%)
Strand = Plus / Plus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 13176601 tggacatggcgtcgcggaagatgacggtgatcggcacggtggatccggtggacgtggtga 13176660
Query: 232 gcaagctgcgcaagg---cgtggtcggcgtccatcgactcagtcggcccggccaaggagc 288
||||||| ||||||| ||||| |||| | |||||| || ||||| |||||||||||||
Sbjct: 13176661 gcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtcggaccggccaaggagc 13176720
Query: 289 ccgagaagaagga 301
| |||||||||||
Sbjct: 13176721 cggagaagaagga 13176733
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 512 gagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||| |||||||| ||||||
Sbjct: 13177178 gagcatggaggagaaccccaactcgtgcgccatttgctga 13177217
Score = 50.1 bits (25), Expect = 0.008
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 75 agaaaattgtggtgaagctggagctgaacagcggcaaggnataagcagaaggccatgaag 134
|||||||||||||||||||||| ||| | | ||||| | ||||||||||||||||||
Sbjct: 13176379 agaaaattgtggtgaagctggacctgcatgacaacaagg-acaagcagaaggccatgaag 13176437
Query: 135 gccgt 139
|||||
Sbjct: 13176438 gccgt 13176442
>emb|AL732381.3 |CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 193499
Score = 125 bits (63), Expect = 2e-25
Identities = 116/133 (87%), Gaps = 3/133 (2%)
Strand = Plus / Minus
Query: 172 tggacatggccacccgcaagatgacggtgatcggcatggtggacccggtggacgtggtga 231
|||||||||| | || ||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 108416 tggacatggcgtcgcggaagatgacggtgatcggcacggtggatccggtggacgtggtga 108357
Query: 232 gcaagctgcgcaagg---cgtggtcggcgtccatcgactcagtcggcccggccaaggagc 288
||||||| ||||||| ||||| |||| | |||||| || ||||| |||||||||||||
Sbjct: 108356 gcaagctccgcaaggcgtcgtgggcggcctacatcgagtcggtcggaccggccaaggagc 108297
Query: 289 ccgagaagaagga 301
| |||||||||||
Sbjct: 108296 cggagaagaagga 108284
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 512 gagcatggaggagaaccccaactcctgcgccatctgctga 551
|||||||||||||||||||||||| |||||||| ||||||
Sbjct: 107839 gagcatggaggagaaccccaactcgtgcgccatttgctga 107800
Score = 50.1 bits (25), Expect = 0.008
Identities = 56/65 (86%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 75 agaaaattgtggtgaagctggagctgaacagcggcaaggnataagcagaaggccatgaag 134
|||||||||||||||||||||| ||| | | ||||| | ||||||||||||||||||
Sbjct: 108638 agaaaattgtggtgaagctggacctgcatgacaacaagg-acaagcagaaggccatgaag 108580
Query: 135 gccgt 139
|||||
Sbjct: 108579 gccgt 108575
>gb|AY487937.1 | Myxococcus xanthus hypothetical protein gene, partial cds; and
hypothetical protein, adventurous gliding protein Z
(aglZ), and MoxR-like ATPase (mla) genes, complete cds
Length = 10518
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 419 gacggagcagcagctcgccga 439
|||||||||||||||||||||
Sbjct: 6875 gacggagcagcagctcgccga 6895
Score = 40.1 bits (20), Expect = 8.0
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 420 acggagcagcagctcgccga 439
||||||||||||||||||||
Sbjct: 7086 acggagcagcagctcgccga 7105
>emb|AL606935.8 | Mouse DNA sequence from clone RP23-204N19 on chromosome 4, complete
sequence
Length = 213391
Score = 40.1 bits (20), Expect = 8.0
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 279 gccaaggagcccgagaagaaggac 302
|||||||||||| |||||||||||
Sbjct: 60371 gccaaggagccctagaagaaggac 60348
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,336,583
Number of Sequences: 3902068
Number of extensions: 4336583
Number of successful extensions: 93360
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91954
Number of HSP's gapped (non-prelim): 1377
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)